1e5c89e4eSSatish Balay #define PETSC_DLL 2e5c89e4eSSatish Balay 3e5c89e4eSSatish Balay /* 4e5c89e4eSSatish Balay This file contains simple binary read/write routines. 5e5c89e4eSSatish Balay */ 6e5c89e4eSSatish Balay 7e30d2299SSatish Balay #include "petsc.h" 8e30d2299SSatish Balay #include "petscsys.h" /*I "petscsys.h" I*/ 9e5c89e4eSSatish Balay 10e5c89e4eSSatish Balay #include <errno.h> 11e5c89e4eSSatish Balay #include <fcntl.h> 12e5c89e4eSSatish Balay #if defined(PETSC_HAVE_UNISTD_H) 13e5c89e4eSSatish Balay #include <unistd.h> 14e5c89e4eSSatish Balay #endif 15e5c89e4eSSatish Balay #if defined (PETSC_HAVE_IO_H) 16e5c89e4eSSatish Balay #include <io.h> 17e5c89e4eSSatish Balay #endif 18e5c89e4eSSatish Balay #include "petscbt.h" 19e5c89e4eSSatish Balay 20e5c89e4eSSatish Balay #if (PETSC_SIZEOF_INT == 8) 21e5c89e4eSSatish Balay #define PetscInt32 short 22e5c89e4eSSatish Balay #else 23e5c89e4eSSatish Balay #define PetscInt32 int 24e5c89e4eSSatish Balay #endif 25e5c89e4eSSatish Balay 26e5c89e4eSSatish Balay #if !defined(PETSC_WORDS_BIGENDIAN) 27e5c89e4eSSatish Balay 28e5c89e4eSSatish Balay #undef __FUNCT__ 29*bd1d2e58SBarry Smith #define __FUNCT__ "PetscByteSwapInt32" 30e5c89e4eSSatish Balay /* 31*bd1d2e58SBarry Smith PetscByteSwapInt32 - Swap bytes in a 32 bit integer. 32e5c89e4eSSatish Balay 33e5c89e4eSSatish Balay */ 34*bd1d2e58SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscByteSwapInt32(PetscInt32 *buff,PetscInt n) 35e5c89e4eSSatish Balay { 36e5c89e4eSSatish Balay PetscInt i,j,tmp = 0; 37e5c89e4eSSatish Balay PetscInt *tptr = &tmp; /* Need to access tmp indirectly to get */ 38e5c89e4eSSatish Balay char *ptr1,*ptr2 = (char*)&tmp; /* arround the bug in DEC-ALPHA g++ */ 39e5c89e4eSSatish Balay 40e5c89e4eSSatish Balay PetscFunctionBegin; 41e5c89e4eSSatish Balay for (j=0; j<n; j++) { 42e5c89e4eSSatish Balay ptr1 = (char*)(buff + j); 43e5c89e4eSSatish Balay for (i=0; i<(int)sizeof(PetscInt32); i++) { 44e5c89e4eSSatish Balay ptr2[i] = ptr1[sizeof(PetscInt32)-1-i]; 45e5c89e4eSSatish Balay } 46e5c89e4eSSatish Balay buff[j] = *tptr; 47e5c89e4eSSatish Balay } 48e5c89e4eSSatish Balay PetscFunctionReturn(0); 49e5c89e4eSSatish Balay } 50e5c89e4eSSatish Balay /* --------------------------------------------------------- */ 51e5c89e4eSSatish Balay #undef __FUNCT__ 52*bd1d2e58SBarry Smith #define __FUNCT__ "PetscByteSwapInt" 53*bd1d2e58SBarry Smith /* 54*bd1d2e58SBarry Smith PetscByteSwapInt - Swap bytes in a bit integer. 55*bd1d2e58SBarry Smith 56*bd1d2e58SBarry Smith */ 57*bd1d2e58SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscByteSwapInt64(PetscInt *buff,PetscInt n) 58*bd1d2e58SBarry Smith { 59*bd1d2e58SBarry Smith PetscInt i,j,tmp = 0; 60*bd1d2e58SBarry Smith PetscInt *tptr = &tmp; /* Need to access tmp indirectly to get */ 61*bd1d2e58SBarry Smith char *ptr1,*ptr2 = (char*)&tmp; /* arround the bug in DEC-ALPHA g++ */ 62*bd1d2e58SBarry Smith 63*bd1d2e58SBarry Smith PetscFunctionBegin; 64*bd1d2e58SBarry Smith for (j=0; j<n; j++) { 65*bd1d2e58SBarry Smith ptr1 = (char*)(buff + j); 66*bd1d2e58SBarry Smith for (i=0; i<(int)sizeof(PetscInt); i++) { 67*bd1d2e58SBarry Smith ptr2[i] = ptr1[sizeof(PetscInt)-1-i]; 68*bd1d2e58SBarry Smith } 69*bd1d2e58SBarry Smith buff[j] = *tptr; 70*bd1d2e58SBarry Smith } 71*bd1d2e58SBarry Smith PetscFunctionReturn(0); 72*bd1d2e58SBarry Smith } 73*bd1d2e58SBarry Smith /* --------------------------------------------------------- */ 74*bd1d2e58SBarry Smith #undef __FUNCT__ 75e5c89e4eSSatish Balay #define __FUNCT__ "PetscByteSwapShort" 76e5c89e4eSSatish Balay /* 77e5c89e4eSSatish Balay PetscByteSwapShort - Swap bytes in a short 78e5c89e4eSSatish Balay */ 79e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscByteSwapShort(short *buff,PetscInt n) 80e5c89e4eSSatish Balay { 81e5c89e4eSSatish Balay PetscInt i,j; 82e5c89e4eSSatish Balay short tmp; 83e5c89e4eSSatish Balay short *tptr = &tmp; /* take care pf bug in DEC-ALPHA g++ */ 84e5c89e4eSSatish Balay char *ptr1,*ptr2 = (char*)&tmp; 85e5c89e4eSSatish Balay 86e5c89e4eSSatish Balay PetscFunctionBegin; 87e5c89e4eSSatish Balay for (j=0; j<n; j++) { 88e5c89e4eSSatish Balay ptr1 = (char*)(buff + j); 89e5c89e4eSSatish Balay for (i=0; i<(int) sizeof(short); i++) { 90e5c89e4eSSatish Balay ptr2[i] = ptr1[sizeof(int)-1-i]; 91e5c89e4eSSatish Balay } 92e5c89e4eSSatish Balay buff[j] = *tptr; 93e5c89e4eSSatish Balay } 94e5c89e4eSSatish Balay PetscFunctionReturn(0); 95e5c89e4eSSatish Balay } 96e5c89e4eSSatish Balay /* --------------------------------------------------------- */ 97e5c89e4eSSatish Balay #undef __FUNCT__ 98e5c89e4eSSatish Balay #define __FUNCT__ "PetscByteSwapScalar" 99e5c89e4eSSatish Balay /* 100e5c89e4eSSatish Balay PetscByteSwapScalar - Swap bytes in a double 101e5c89e4eSSatish Balay Complex is dealt with as if array of double twice as long. 102e5c89e4eSSatish Balay */ 103e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscByteSwapScalar(PetscScalar *buff,PetscInt n) 104e5c89e4eSSatish Balay { 105e5c89e4eSSatish Balay PetscInt i,j; 106e5c89e4eSSatish Balay PetscReal tmp,*buff1 = (PetscReal*)buff; 107e5c89e4eSSatish Balay PetscReal *tptr = &tmp; /* take care pf bug in DEC-ALPHA g++ */ 108e5c89e4eSSatish Balay char *ptr1,*ptr2 = (char*)&tmp; 109e5c89e4eSSatish Balay 110e5c89e4eSSatish Balay PetscFunctionBegin; 111e5c89e4eSSatish Balay #if defined(PETSC_USE_COMPLEX) 112e5c89e4eSSatish Balay n *= 2; 113e5c89e4eSSatish Balay #endif 114e5c89e4eSSatish Balay for (j=0; j<n; j++) { 115e5c89e4eSSatish Balay ptr1 = (char*)(buff1 + j); 116e5c89e4eSSatish Balay for (i=0; i<(int) sizeof(PetscReal); i++) { 117e5c89e4eSSatish Balay ptr2[i] = ptr1[sizeof(PetscReal)-1-i]; 118e5c89e4eSSatish Balay } 119e5c89e4eSSatish Balay buff1[j] = *tptr; 120e5c89e4eSSatish Balay } 121e5c89e4eSSatish Balay PetscFunctionReturn(0); 122e5c89e4eSSatish Balay } 123e5c89e4eSSatish Balay /* --------------------------------------------------------- */ 124e5c89e4eSSatish Balay #undef __FUNCT__ 125e5c89e4eSSatish Balay #define __FUNCT__ "PetscByteSwapDouble" 126e5c89e4eSSatish Balay /* 127e5c89e4eSSatish Balay PetscByteSwapDouble - Swap bytes in a double 128e5c89e4eSSatish Balay */ 129e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscByteSwapDouble(double *buff,PetscInt n) 130e5c89e4eSSatish Balay { 131e5c89e4eSSatish Balay PetscInt i,j; 132e5c89e4eSSatish Balay double tmp,*buff1 = (double*)buff; 133e5c89e4eSSatish Balay double *tptr = &tmp; /* take care pf bug in DEC-ALPHA g++ */ 134e5c89e4eSSatish Balay char *ptr1,*ptr2 = (char*)&tmp; 135e5c89e4eSSatish Balay 136e5c89e4eSSatish Balay PetscFunctionBegin; 137e5c89e4eSSatish Balay for (j=0; j<n; j++) { 138e5c89e4eSSatish Balay ptr1 = (char*)(buff1 + j); 139e5c89e4eSSatish Balay for (i=0; i<(int) sizeof(double); i++) { 140e5c89e4eSSatish Balay ptr2[i] = ptr1[sizeof(double)-1-i]; 141e5c89e4eSSatish Balay } 142e5c89e4eSSatish Balay buff1[j] = *tptr; 143e5c89e4eSSatish Balay } 144e5c89e4eSSatish Balay PetscFunctionReturn(0); 145e5c89e4eSSatish Balay } 146e5c89e4eSSatish Balay #endif 147e5c89e4eSSatish Balay /* --------------------------------------------------------- */ 148e5c89e4eSSatish Balay #undef __FUNCT__ 149e5c89e4eSSatish Balay #define __FUNCT__ "PetscBinaryRead" 150e30d2299SSatish Balay /*@ 151e5c89e4eSSatish Balay PetscBinaryRead - Reads from a binary file. 152e5c89e4eSSatish Balay 153e5c89e4eSSatish Balay Not Collective 154e5c89e4eSSatish Balay 155e5c89e4eSSatish Balay Input Parameters: 156e5c89e4eSSatish Balay + fd - the file 157e5c89e4eSSatish Balay . n - the number of items to read 158e5c89e4eSSatish Balay - type - the type of items to read (PETSC_INT, PETSC_DOUBLE or PETSC_SCALAR) 159e5c89e4eSSatish Balay 160e5c89e4eSSatish Balay Output Parameters: 161e5c89e4eSSatish Balay . p - the buffer 162e5c89e4eSSatish Balay 163e5c89e4eSSatish Balay 164e5c89e4eSSatish Balay 165e5c89e4eSSatish Balay Level: developer 166e5c89e4eSSatish Balay 167e5c89e4eSSatish Balay Notes: 168e5c89e4eSSatish Balay PetscBinaryRead() uses byte swapping to work on all machines; the files 169e5c89e4eSSatish Balay are written to file ALWAYS using big-endian ordering. On small-endian machines the numbers 170e5c89e4eSSatish Balay are converted to the small-endian format when they are read in from the file. 171e5c89e4eSSatish Balay Integers are stored on the file as 32 bits long, regardless of whether 172e5c89e4eSSatish Balay they are stored in the machine as 32 bits or 64 bits, this means the same 173e5c89e4eSSatish Balay binary file may be read on any machine. 174e5c89e4eSSatish Balay 175e5c89e4eSSatish Balay Concepts: files^reading binary 176e5c89e4eSSatish Balay Concepts: binary files^reading 177e5c89e4eSSatish Balay 1784ebed01fSBarry Smith .seealso: PetscBinaryWrite(), PetscBinaryOpen(), PetscBinaryClose(), PetscViewerBinaryGetDescriptor(), PetscBinarySynchronizedWrite(), 1794ebed01fSBarry Smith PetscBinarySynchronizedRead(), PetscBinarySynchronizedSeek() 180e5c89e4eSSatish Balay @*/ 181e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscBinaryRead(int fd,void *p,PetscInt n,PetscDataType type) 182e5c89e4eSSatish Balay { 18341e811b7SSatish Balay #if (PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES) || !defined(PETSC_WORDS_BIGENDIAN) 184e5c89e4eSSatish Balay PetscErrorCode ierr; 185e5c89e4eSSatish Balay #endif 186e5c89e4eSSatish Balay int wsize,err; 187e5c89e4eSSatish Balay size_t m = (size_t) n,maxblock = 65536; 188e5c89e4eSSatish Balay char *pp = (char*)p; 18941e811b7SSatish Balay #if (PETSC_SIZEOF_INT == 8) || !defined(PETSC_WORDS_BIGENDIAN) || defined(PETSC_USE_64BIT_INDICES) 190e5c89e4eSSatish Balay void *ptmp = p; 191e5c89e4eSSatish Balay #endif 192e5c89e4eSSatish Balay 193e5c89e4eSSatish Balay PetscFunctionBegin; 194e5c89e4eSSatish Balay if (!n) PetscFunctionReturn(0); 195e5c89e4eSSatish Balay 196e5c89e4eSSatish Balay if (type == PETSC_INT){ 197*bd1d2e58SBarry Smith #if defined(PETSC_USE_64BIT_INDICES_BINARY) 198*bd1d2e58SBarry Smith m *= sizeof(PetscInt); 199*bd1d2e58SBarry Smith #else 200e5c89e4eSSatish Balay m *= sizeof(PetscInt32); 201*bd1d2e58SBarry Smith #endif 202*bd1d2e58SBarry Smith #if ((PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES)) && !defined(PETSC_USE_64BIT_INDICES_BINARY) 203e5c89e4eSSatish Balay /* read them in as 32 bit ints, later stretch into ints */ 204e5c89e4eSSatish Balay ierr = PetscMalloc(m,&pp);CHKERRQ(ierr); 205e5c89e4eSSatish Balay ptmp = (void*)pp; 206e5c89e4eSSatish Balay #endif 207e5c89e4eSSatish Balay } 208e5c89e4eSSatish Balay else if (type == PETSC_SCALAR) m *= sizeof(PetscScalar); 209e5c89e4eSSatish Balay else if (type == PETSC_DOUBLE) m *= sizeof(double); 210e5c89e4eSSatish Balay else if (type == PETSC_SHORT) m *= sizeof(short); 211e5c89e4eSSatish Balay else if (type == PETSC_CHAR) m *= sizeof(char); 212e5c89e4eSSatish Balay else if (type == PETSC_ENUM) m *= sizeof(PetscEnum); 213e5c89e4eSSatish Balay else if (type == PETSC_TRUTH) m *= sizeof(PetscTruth); 214e5c89e4eSSatish Balay else if (type == PETSC_LOGICAL) m = PetscBTLength(m)*sizeof(char); 215e5c89e4eSSatish Balay else SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Unknown type"); 216e5c89e4eSSatish Balay 217e5c89e4eSSatish Balay while (m) { 218e5c89e4eSSatish Balay wsize = (m < maxblock) ? m : maxblock; 219e5c89e4eSSatish Balay err = read(fd,pp,wsize); 220e5c89e4eSSatish Balay if (err < 0 && errno == EINTR) continue; 221e5c89e4eSSatish Balay if (!err && wsize > 0) SETERRQ(PETSC_ERR_FILE_READ,"Read past end of file"); 222a1f04975SBarry Smith if (err < 0) SETERRQ1(PETSC_ERR_FILE_READ,"Error reading from file, errno %d",errno); 223e5c89e4eSSatish Balay m -= err; 224e5c89e4eSSatish Balay pp += err; 225e5c89e4eSSatish Balay } 226e5c89e4eSSatish Balay #if !defined(PETSC_WORDS_BIGENDIAN) 227*bd1d2e58SBarry Smith #if defined(PETSC_USE_64BIT_INDICES_BINARY) 228*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt64((PetscInt*)ptmp,n);CHKERRQ(ierr);} 229*bd1d2e58SBarry Smith #else 230*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 231*bd1d2e58SBarry Smith #endif 232*bd1d2e58SBarry Smith else if (type == PETSC_ENUM) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 233*bd1d2e58SBarry Smith else if (type == PETSC_TRUTH) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 234e5c89e4eSSatish Balay else if (type == PETSC_SCALAR) {ierr = PetscByteSwapScalar((PetscScalar*)ptmp,n);CHKERRQ(ierr);} 235e5c89e4eSSatish Balay else if (type == PETSC_DOUBLE) {ierr = PetscByteSwapDouble((double*)ptmp,n);CHKERRQ(ierr);} 236e5c89e4eSSatish Balay else if (type == PETSC_SHORT) {ierr = PetscByteSwapShort((short*)ptmp,n);CHKERRQ(ierr);} 237e5c89e4eSSatish Balay #endif 238e5c89e4eSSatish Balay 239*bd1d2e58SBarry Smith #if ((PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES)) && !defined(PETSC_USE_64BIT_INDICES_BINARY) 240e5c89e4eSSatish Balay if (type == PETSC_INT) { 241e5c89e4eSSatish Balay PetscInt *p_int = (PetscInt*)p,i; 242e5c89e4eSSatish Balay PetscInt32 *p_short = (PetscInt32 *)ptmp; 243e5c89e4eSSatish Balay for (i=0; i<n; i++) { 244e5c89e4eSSatish Balay p_int[i] = (PetscInt)p_short[i]; 245e5c89e4eSSatish Balay } 246e5c89e4eSSatish Balay ierr = PetscFree(ptmp);CHKERRQ(ierr); 247e5c89e4eSSatish Balay } 248e5c89e4eSSatish Balay #endif 249e5c89e4eSSatish Balay PetscFunctionReturn(0); 250e5c89e4eSSatish Balay } 251e5c89e4eSSatish Balay /* --------------------------------------------------------- */ 252e5c89e4eSSatish Balay #undef __FUNCT__ 253e5c89e4eSSatish Balay #define __FUNCT__ "PetscBinaryWrite" 254e30d2299SSatish Balay /*@ 255e5c89e4eSSatish Balay PetscBinaryWrite - Writes to a binary file. 256e5c89e4eSSatish Balay 257e5c89e4eSSatish Balay Not Collective 258e5c89e4eSSatish Balay 259e5c89e4eSSatish Balay Input Parameters: 260e5c89e4eSSatish Balay + fd - the file 261e5c89e4eSSatish Balay . p - the buffer 262e5c89e4eSSatish Balay . n - the number of items to write 263e5c89e4eSSatish Balay . type - the type of items to read (PETSC_INT, PETSC_DOUBLE or PETSC_SCALAR) 264e5c89e4eSSatish Balay - istemp - PETSC_FALSE if buffer data should be preserved, PETSC_TRUE otherwise. 265e5c89e4eSSatish Balay 266e5c89e4eSSatish Balay Level: advanced 267e5c89e4eSSatish Balay 268e5c89e4eSSatish Balay Notes: 269e5c89e4eSSatish Balay PetscBinaryWrite() uses byte swapping to work on all machines; the files 270e5c89e4eSSatish Balay are written using big-endian ordering to the file. On small-endian machines the numbers 271e5c89e4eSSatish Balay are converted to the big-endian format when they are written to disk. 272e5c89e4eSSatish Balay Integers are stored on the file as 32 bits long, regardless of whether 273e5c89e4eSSatish Balay they are stored in the machine as 32 bits or 64 bits, this means the same 274e5c89e4eSSatish Balay binary file may be read on any machine. It also means that 64 bit integers larger than 275e5c89e4eSSatish Balay roughly 2 billion are TRUNCATED/WRONG when written to the file. 276e5c89e4eSSatish Balay 277e5c89e4eSSatish Balay The Buffer p should be read-write buffer, and not static data. 278e5c89e4eSSatish Balay This way, byte-swapping is done in-place, and then the buffer is 279e5c89e4eSSatish Balay written to the file. 280e5c89e4eSSatish Balay 281e5c89e4eSSatish Balay This routine restores the original contents of the buffer, after 282e5c89e4eSSatish Balay it is written to the file. This is done by byte-swapping in-place 283e5c89e4eSSatish Balay the second time. If the flag istemp is set to PETSC_TRUE, the second 284e5c89e4eSSatish Balay byte-swapping operation is not done, thus saving some computation, 285e5c89e4eSSatish Balay but the buffer corrupted is corrupted. 286e5c89e4eSSatish Balay 287e5c89e4eSSatish Balay Concepts: files^writing binary 288e5c89e4eSSatish Balay Concepts: binary files^writing 289e5c89e4eSSatish Balay 2904ebed01fSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryOpen(), PetscBinaryClose(), PetscViewerBinaryGetDescriptor(), PetscBinarySynchronizedWrite(), 2914ebed01fSBarry Smith PetscBinarySynchronizedRead(), PetscBinarySynchronizedSeek() 292e5c89e4eSSatish Balay @*/ 293e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscBinaryWrite(int fd,void *p,PetscInt n,PetscDataType type,PetscTruth istemp) 294e5c89e4eSSatish Balay { 295e5c89e4eSSatish Balay char *pp = (char*)p; 296e5c89e4eSSatish Balay int err,wsize; 297e5c89e4eSSatish Balay size_t m = (size_t)n,maxblock=65536; 29841e811b7SSatish Balay #if !defined(PETSC_WORDS_BIGENDIAN) || (PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES) 299e5c89e4eSSatish Balay PetscErrorCode ierr; 300e5c89e4eSSatish Balay void *ptmp = p; 301e5c89e4eSSatish Balay #endif 302e5c89e4eSSatish Balay 303e5c89e4eSSatish Balay PetscFunctionBegin; 304e5c89e4eSSatish Balay if (n < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Trying to write a negative amount of data %D",n); 305e5c89e4eSSatish Balay if (!n) PetscFunctionReturn(0); 306e5c89e4eSSatish Balay 307e5c89e4eSSatish Balay if (type == PETSC_INT){ 308*bd1d2e58SBarry Smith #if defined(PETSC_USE_64BIT_INDICES_BINARY) 309*bd1d2e58SBarry Smith m *= sizeof(PetscInt); 310*bd1d2e58SBarry Smith #else 311e5c89e4eSSatish Balay m *= sizeof(PetscInt32); 312*bd1d2e58SBarry Smith #endif 313*bd1d2e58SBarry Smith #if ((PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES)) && !defined(PETSC_USE_64BIT_INDICES_BINARY) 314e5c89e4eSSatish Balay PetscInt *p_int = (PetscInt*)p,i; 315e5c89e4eSSatish Balay PetscInt32 *p_short; 316e5c89e4eSSatish Balay ierr = PetscMalloc(m,&pp);CHKERRQ(ierr); 317e5c89e4eSSatish Balay ptmp = (void*)pp; 318e5c89e4eSSatish Balay p_short = (PetscInt32*)pp; 319e5c89e4eSSatish Balay 320e5c89e4eSSatish Balay for (i=0; i<n; i++) { 321e5c89e4eSSatish Balay p_short[i] = (PetscInt32) p_int[i]; 322e5c89e4eSSatish Balay } 323e5c89e4eSSatish Balay istemp = PETSC_TRUE; 324e5c89e4eSSatish Balay #endif 325e5c89e4eSSatish Balay } 326e5c89e4eSSatish Balay else if (type == PETSC_SCALAR) m *= sizeof(PetscScalar); 327e5c89e4eSSatish Balay else if (type == PETSC_DOUBLE) m *= sizeof(double); 328e5c89e4eSSatish Balay else if (type == PETSC_SHORT) m *= sizeof(short); 329e5c89e4eSSatish Balay else if (type == PETSC_CHAR) m *= sizeof(char); 330e5c89e4eSSatish Balay else if (type == PETSC_ENUM) m *= sizeof(PetscEnum); 331e5c89e4eSSatish Balay else if (type == PETSC_TRUTH) m *= sizeof(PetscTruth); 332e5c89e4eSSatish Balay else if (type == PETSC_LOGICAL) m = PetscBTLength(m)*sizeof(char); 333e5c89e4eSSatish Balay else SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Unknown type"); 334e5c89e4eSSatish Balay 335e5c89e4eSSatish Balay #if !defined(PETSC_WORDS_BIGENDIAN) 336*bd1d2e58SBarry Smith #if defined(PETSC_USE_64BIT_INDICES_BINARY) 337*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt64((PetscInt*)ptmp,n);CHKERRQ(ierr);} 338*bd1d2e58SBarry Smith #else 339*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 340*bd1d2e58SBarry Smith #endif 341*bd1d2e58SBarry Smith else if (type == PETSC_ENUM) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 342*bd1d2e58SBarry Smith else if (type == PETSC_TRUTH) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 343e5c89e4eSSatish Balay else if (type == PETSC_SCALAR) {ierr = PetscByteSwapScalar((PetscScalar*)ptmp,n);CHKERRQ(ierr);} 344e5c89e4eSSatish Balay else if (type == PETSC_DOUBLE) {ierr = PetscByteSwapDouble((double*)ptmp,n);CHKERRQ(ierr);} 345e5c89e4eSSatish Balay else if (type == PETSC_SHORT) {ierr = PetscByteSwapShort((short*)ptmp,n);CHKERRQ(ierr);} 346e5c89e4eSSatish Balay #endif 347e5c89e4eSSatish Balay 348e5c89e4eSSatish Balay while (m) { 349e5c89e4eSSatish Balay wsize = (m < maxblock) ? m : maxblock; 350e5c89e4eSSatish Balay err = write(fd,pp,wsize); 351e5c89e4eSSatish Balay if (err < 0 && errno == EINTR) continue; 352e5c89e4eSSatish Balay if (err != wsize) SETERRQ(PETSC_ERR_FILE_WRITE,"Error writing to file."); 353e5c89e4eSSatish Balay m -= wsize; 354e5c89e4eSSatish Balay pp += wsize; 355e5c89e4eSSatish Balay } 356e5c89e4eSSatish Balay 357b659c0ceSSatish Balay #if !defined(PETSC_WORDS_BIGENDIAN) 358e5c89e4eSSatish Balay if (!istemp) { 359*bd1d2e58SBarry Smith #if defined(PETSC_USE_64BIT_INDICES_BINARY) 360*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt64((PetscInt*)ptmp,n);CHKERRQ(ierr);} 361*bd1d2e58SBarry Smith #else 362*bd1d2e58SBarry Smith if (type == PETSC_INT) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 363*bd1d2e58SBarry Smith #endif 364e5c89e4eSSatish Balay if (type == PETSC_SCALAR) {ierr = PetscByteSwapScalar((PetscScalar*)ptmp,n);CHKERRQ(ierr);} 365b63245c5SSatish Balay else if (type == PETSC_DOUBLE) {ierr = PetscByteSwapDouble((double*)ptmp,n);CHKERRQ(ierr);} 366e5c89e4eSSatish Balay else if (type == PETSC_SHORT) {ierr = PetscByteSwapShort((short*)ptmp,n);CHKERRQ(ierr);} 367*bd1d2e58SBarry Smith else if (type == PETSC_INT) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 368*bd1d2e58SBarry Smith else if (type == PETSC_ENUM) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 369*bd1d2e58SBarry Smith else if (type == PETSC_TRUTH) {ierr = PetscByteSwapInt32((PetscInt32*)ptmp,n);CHKERRQ(ierr);} 370e5c89e4eSSatish Balay } 371e5c89e4eSSatish Balay #endif 372e5c89e4eSSatish Balay 373*bd1d2e58SBarry Smith #if (PETSC_SIZEOF_INT == 8) || defined(PETSC_USE_64BIT_INDICES) && !defined(PETSC_USE_64BIT_INDICES_BINARY) 374e5c89e4eSSatish Balay if (type == PETSC_INT){ 375e5c89e4eSSatish Balay ierr = PetscFree(ptmp);CHKERRQ(ierr); 376e5c89e4eSSatish Balay } 377e5c89e4eSSatish Balay #endif 378e5c89e4eSSatish Balay PetscFunctionReturn(0); 379e5c89e4eSSatish Balay } 380e5c89e4eSSatish Balay 381e5c89e4eSSatish Balay #undef __FUNCT__ 382e5c89e4eSSatish Balay #define __FUNCT__ "PetscBinaryOpen" 383e5c89e4eSSatish Balay /*@C 384e5c89e4eSSatish Balay PetscBinaryOpen - Opens a PETSc binary file. 385e5c89e4eSSatish Balay 386e5c89e4eSSatish Balay Not Collective 387e5c89e4eSSatish Balay 388e5c89e4eSSatish Balay Input Parameters: 389e5c89e4eSSatish Balay + name - filename 39045c64e65SBarry Smith - type - type of binary file, one of FILE_MODE_READ, FILE_MODE_APPEND, FILE_MODE_WRITE 391e5c89e4eSSatish Balay 392e5c89e4eSSatish Balay Output Parameter: 393e5c89e4eSSatish Balay . fd - the file 394e5c89e4eSSatish Balay 395e5c89e4eSSatish Balay Level: advanced 396e5c89e4eSSatish Balay 397e5c89e4eSSatish Balay Concepts: files^opening binary 398e5c89e4eSSatish Balay Concepts: binary files^opening 399e5c89e4eSSatish Balay 400e5c89e4eSSatish Balay Notes: Files access with PetscBinaryRead() and PetscBinaryWrite() are ALWAYS written in 401e5c89e4eSSatish Balay big-endian format. This means the file can be accessed using PetscBinaryOpen() and 402e5c89e4eSSatish Balay PetscBinaryRead() and PetscBinaryWrite() on any machine. 403e5c89e4eSSatish Balay 4044ebed01fSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscFileMode, PetscViewerFileSetMode(), PetscViewerBinaryGetDescriptor(), 4054ebed01fSBarry Smith PetscBinarySynchronizedWrite(), PetscBinarySynchronizedRead(), PetscBinarySynchronizedSeek() 40645c64e65SBarry Smith 407e5c89e4eSSatish Balay @*/ 40845c64e65SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscBinaryOpen(const char name[],PetscFileMode mode,int *fd) 409e5c89e4eSSatish Balay { 410e5c89e4eSSatish Balay PetscFunctionBegin; 411e5c89e4eSSatish Balay #if defined(PETSC_HAVE_O_BINARY) 41245c64e65SBarry Smith if (mode == FILE_MODE_WRITE) { 413e5c89e4eSSatish Balay if ((*fd = open(name,O_WRONLY|O_CREAT|O_TRUNC|O_BINARY,0666)) == -1) { 414e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot create file for writing: %s",name); 415e5c89e4eSSatish Balay } 41645c64e65SBarry Smith } else if (mode == FILE_MODE_READ) { 417e5c89e4eSSatish Balay if ((*fd = open(name,O_RDONLY|O_BINARY,0)) == -1) { 418e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot open file for reading: %s",name); 419e5c89e4eSSatish Balay } 42045c64e65SBarry Smith } else if (mode == FILE_MODE_APPEND) { 421e5c89e4eSSatish Balay if ((*fd = open(name,O_WRONLY|O_BINARY,0)) == -1) { 422e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot open file for writing: %s",name); 423e5c89e4eSSatish Balay } 424e5c89e4eSSatish Balay #else 42545c64e65SBarry Smith if (mode == FILE_MODE_WRITE) { 426e5c89e4eSSatish Balay if ((*fd = creat(name,0666)) == -1) { 427e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot create file for writing: %s",name); 428e5c89e4eSSatish Balay } 42945c64e65SBarry Smith } else if (mode == FILE_MODE_READ) { 430e5c89e4eSSatish Balay if ((*fd = open(name,O_RDONLY,0)) == -1) { 431e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot open file for reading: %s",name); 432e5c89e4eSSatish Balay } 433e5c89e4eSSatish Balay } 43445c64e65SBarry Smith else if (mode == FILE_MODE_APPEND) { 435e5c89e4eSSatish Balay if ((*fd = open(name,O_WRONLY,0)) == -1) { 436e5c89e4eSSatish Balay SETERRQ1(PETSC_ERR_FILE_OPEN,"Cannot open file for writing: %s",name); 437e5c89e4eSSatish Balay } 438e5c89e4eSSatish Balay #endif 43945c64e65SBarry Smith } else SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Unknown file mode"); 440e5c89e4eSSatish Balay PetscFunctionReturn(0); 441e5c89e4eSSatish Balay } 442e5c89e4eSSatish Balay 443e5c89e4eSSatish Balay #undef __FUNCT__ 444e5c89e4eSSatish Balay #define __FUNCT__ "PetscBinaryClose" 445e30d2299SSatish Balay /*@ 446e5c89e4eSSatish Balay PetscBinaryClose - Closes a PETSc binary file. 447e5c89e4eSSatish Balay 448e5c89e4eSSatish Balay Not Collective 449e5c89e4eSSatish Balay 450e5c89e4eSSatish Balay Output Parameter: 451e5c89e4eSSatish Balay . fd - the file 452e5c89e4eSSatish Balay 453e5c89e4eSSatish Balay Level: advanced 454e5c89e4eSSatish Balay 4554ebed01fSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscBinaryOpen(), PetscBinarySynchronizedWrite(), PetscBinarySynchronizedRead(), 4564ebed01fSBarry Smith PetscBinarySynchronizedSeek() 457e5c89e4eSSatish Balay @*/ 458e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscBinaryClose(int fd) 459e5c89e4eSSatish Balay { 460e5c89e4eSSatish Balay PetscFunctionBegin; 461e5c89e4eSSatish Balay close(fd); 462e5c89e4eSSatish Balay PetscFunctionReturn(0); 463e5c89e4eSSatish Balay } 464e5c89e4eSSatish Balay 465e5c89e4eSSatish Balay 466e5c89e4eSSatish Balay #undef __FUNCT__ 467e5c89e4eSSatish Balay #define __FUNCT__ "PetscBinarySeek" 468e30d2299SSatish Balay /*@ 469e5c89e4eSSatish Balay PetscBinarySeek - Moves the file pointer on a PETSc binary file. 470e5c89e4eSSatish Balay 471e5c89e4eSSatish Balay Not Collective 472e5c89e4eSSatish Balay 473e5c89e4eSSatish Balay Input Parameters: 474e5c89e4eSSatish Balay + fd - the file 475ff553b35SMatthew Knepley . off - number of bytes to move. Use PETSC_BINARY_INT_SIZE, PETSC_BINARY_SCALAR_SIZE, 476e5c89e4eSSatish Balay etc. in your calculation rather than sizeof() to compute byte lengths. 477ff553b35SMatthew Knepley - whence - if PETSC_BINARY_SEEK_SET then off is an absolute location in the file 478ff553b35SMatthew Knepley if PETSC_BINARY_SEEK_CUR then off is an offset from the current location 479ff553b35SMatthew Knepley if PETSC_BINARY_SEEK_END then off is an offset from the end of file 480e5c89e4eSSatish Balay 481e5c89e4eSSatish Balay Output Parameter: 482e5c89e4eSSatish Balay . offset - new offset in file 483e5c89e4eSSatish Balay 484e5c89e4eSSatish Balay Level: developer 485e5c89e4eSSatish Balay 486e5c89e4eSSatish Balay Notes: 487e5c89e4eSSatish Balay Integers are stored on the file as 32 long, regardless of whether 488e5c89e4eSSatish Balay they are stored in the machine as 32 or 64, this means the same 489e5c89e4eSSatish Balay binary file may be read on any machine. Hence you CANNOT use sizeof() 490e5c89e4eSSatish Balay to determine the offset or location. 491e5c89e4eSSatish Balay 492e5c89e4eSSatish Balay Concepts: files^binary seeking 493e5c89e4eSSatish Balay Concepts: binary files^seeking 494e5c89e4eSSatish Balay 4954ebed01fSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscBinaryOpen(), PetscBinarySynchronizedWrite(), PetscBinarySynchronizedRead(), 4964ebed01fSBarry Smith PetscBinarySynchronizedSeek() 497e5c89e4eSSatish Balay @*/ 498e5c89e4eSSatish Balay PetscErrorCode PETSC_DLLEXPORT PetscBinarySeek(int fd,off_t off,PetscBinarySeekType whence,off_t *offset) 499e5c89e4eSSatish Balay { 500e5c89e4eSSatish Balay int iwhence = 0; 501e5c89e4eSSatish Balay 502e5c89e4eSSatish Balay PetscFunctionBegin; 503e5c89e4eSSatish Balay if (whence == PETSC_BINARY_SEEK_SET) { 504e5c89e4eSSatish Balay iwhence = SEEK_SET; 505e5c89e4eSSatish Balay } else if (whence == PETSC_BINARY_SEEK_CUR) { 506e5c89e4eSSatish Balay iwhence = SEEK_CUR; 507e5c89e4eSSatish Balay } else if (whence == PETSC_BINARY_SEEK_END) { 508e5c89e4eSSatish Balay iwhence = SEEK_END; 509e5c89e4eSSatish Balay } else { 510e5c89e4eSSatish Balay SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Unknown seek location"); 511e5c89e4eSSatish Balay } 512e5c89e4eSSatish Balay #if defined(PETSC_HAVE_LSEEK) 513e5c89e4eSSatish Balay *offset = lseek(fd,off,iwhence); 514e5c89e4eSSatish Balay #elif defined(PETSC_HAVE__LSEEK) 515e5c89e4eSSatish Balay *offset = _lseek(fd,(long)off,iwhence); 516e5c89e4eSSatish Balay #else 517e5c89e4eSSatish Balay SETERRQ(PETSC_ERR_SUP_SYS,"System does not have a way of seeking on a file"); 518e5c89e4eSSatish Balay #endif 519e5c89e4eSSatish Balay PetscFunctionReturn(0); 520e5c89e4eSSatish Balay } 521e5c89e4eSSatish Balay 522e5c89e4eSSatish Balay #undef __FUNCT__ 5231d280d73SBarry Smith #define __FUNCT__ "PetscBinarySynchronizedRead" 524e5c89e4eSSatish Balay /*@C 5251d280d73SBarry Smith PetscBinarySynchronizedRead - Reads from a binary file. 526e5c89e4eSSatish Balay 527e5c89e4eSSatish Balay Collective on MPI_Comm 528e5c89e4eSSatish Balay 529e5c89e4eSSatish Balay Input Parameters: 530e5c89e4eSSatish Balay + comm - the MPI communicator 531e5c89e4eSSatish Balay . fd - the file 532e5c89e4eSSatish Balay . n - the number of items to read 533e5c89e4eSSatish Balay - type - the type of items to read (PETSC_INT, PETSC_DOUBLE or PETSC_SCALAR) 534e5c89e4eSSatish Balay 535e5c89e4eSSatish Balay Output Parameters: 536e5c89e4eSSatish Balay . p - the buffer 537e5c89e4eSSatish Balay 538e5c89e4eSSatish Balay Options Database Key: 539e5c89e4eSSatish Balay . -binary_longints - indicates the file was generated on a Cray vector 540e5c89e4eSSatish Balay machine (not the T3E/D) and the ints are stored as 64 bit 541e5c89e4eSSatish Balay quantities, otherwise they are stored as 32 bit 542e5c89e4eSSatish Balay 543e5c89e4eSSatish Balay Level: developer 544e5c89e4eSSatish Balay 545e5c89e4eSSatish Balay Notes: 546e5c89e4eSSatish Balay Does a PetscBinaryRead() followed by an MPI_Bcast() 547e5c89e4eSSatish Balay 5481d280d73SBarry Smith PetscBinarySynchronizedRead() uses byte swapping to work on all machines. 549e5c89e4eSSatish Balay Integers are stored on the file as 32 long, regardless of whether 550e5c89e4eSSatish Balay they are stored in the machine as 32 or 64, this means the same 551e5c89e4eSSatish Balay binary file may be read on any machine. 552e5c89e4eSSatish Balay 553e5c89e4eSSatish Balay Concepts: files^synchronized reading of binary files 554e5c89e4eSSatish Balay Concepts: binary files^reading, synchronized 555e5c89e4eSSatish Balay 5564ebed01fSBarry Smith .seealso: PetscBinaryWrite(), PetscBinaryOpen(), PetscBinaryClose(), PetscBinaryRead(), PetscBinarySynchronizedWrite(), 5574ebed01fSBarry Smith PetscBinarySynchronizedSeek() 558e5c89e4eSSatish Balay @*/ 5591d280d73SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedRead(MPI_Comm comm,int fd,void *p,PetscInt n,PetscDataType type) 560e5c89e4eSSatish Balay { 561e5c89e4eSSatish Balay PetscErrorCode ierr; 562e5c89e4eSSatish Balay PetscMPIInt rank; 563e5c89e4eSSatish Balay MPI_Datatype mtype; 564e5c89e4eSSatish Balay 565e5c89e4eSSatish Balay PetscFunctionBegin; 566e5c89e4eSSatish Balay ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 567e5c89e4eSSatish Balay if (!rank) { 568e5c89e4eSSatish Balay ierr = PetscBinaryRead(fd,p,n,type);CHKERRQ(ierr); 569e5c89e4eSSatish Balay } 570e5c89e4eSSatish Balay ierr = PetscDataTypeToMPIDataType(type,&mtype);CHKERRQ(ierr); 571e5c89e4eSSatish Balay ierr = MPI_Bcast(p,n,mtype,0,comm);CHKERRQ(ierr); 572e5c89e4eSSatish Balay PetscFunctionReturn(0); 573e5c89e4eSSatish Balay } 574e5c89e4eSSatish Balay 575e5c89e4eSSatish Balay #undef __FUNCT__ 5761d280d73SBarry Smith #define __FUNCT__ "PetscBinarySynchronizedWrite" 577e5c89e4eSSatish Balay /*@C 5781d280d73SBarry Smith PetscBinarySynchronizedWrite - writes to a binary file. 579e5c89e4eSSatish Balay 580e5c89e4eSSatish Balay Collective on MPI_Comm 581e5c89e4eSSatish Balay 582e5c89e4eSSatish Balay Input Parameters: 583e5c89e4eSSatish Balay + comm - the MPI communicator 584e5c89e4eSSatish Balay . fd - the file 585e5c89e4eSSatish Balay . n - the number of items to write 586e5c89e4eSSatish Balay . p - the buffer 587e5c89e4eSSatish Balay . istemp - the buffer may be changed 588e5c89e4eSSatish Balay - type - the type of items to write (PETSC_INT, PETSC_DOUBLE or PETSC_SCALAR) 589e5c89e4eSSatish Balay 590e5c89e4eSSatish Balay Level: developer 591e5c89e4eSSatish Balay 592e5c89e4eSSatish Balay Notes: 593e5c89e4eSSatish Balay Process 0 does a PetscBinaryWrite() 594e5c89e4eSSatish Balay 5951d280d73SBarry Smith PetscBinarySynchronizedWrite() uses byte swapping to work on all machines. 596e5c89e4eSSatish Balay Integers are stored on the file as 32 long, regardless of whether 597e5c89e4eSSatish Balay they are stored in the machine as 32 or 64, this means the same 598e5c89e4eSSatish Balay binary file may be read on any machine. 599e5c89e4eSSatish Balay 6001d280d73SBarry Smith WARNING: This is NOT like PetscSynchronizedFPrintf()! This routine ignores calls on all but process 0, 6011d280d73SBarry Smith while PetscSynchronizedFPrintf() has all processes print their strings in order. 6021d280d73SBarry Smith 603e5c89e4eSSatish Balay Concepts: files^synchronized writing of binary files 604e5c89e4eSSatish Balay Concepts: binary files^reading, synchronized 605e5c89e4eSSatish Balay 6064ebed01fSBarry Smith .seealso: PetscBinaryWrite(), PetscBinaryOpen(), PetscBinaryClose(), PetscBinaryRead(), PetscBinarySynchronizedRead(), 6074ebed01fSBarry Smith PetscBinarySynchronizedSeek() 608e5c89e4eSSatish Balay @*/ 6091d280d73SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedWrite(MPI_Comm comm,int fd,void *p,PetscInt n,PetscDataType type,PetscTruth istemp) 610e5c89e4eSSatish Balay { 611e5c89e4eSSatish Balay PetscErrorCode ierr; 612e5c89e4eSSatish Balay PetscMPIInt rank; 613e5c89e4eSSatish Balay 614e5c89e4eSSatish Balay PetscFunctionBegin; 615e5c89e4eSSatish Balay ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 616e5c89e4eSSatish Balay if (!rank) { 617e5c89e4eSSatish Balay ierr = PetscBinaryWrite(fd,p,n,type,istemp);CHKERRQ(ierr); 618e5c89e4eSSatish Balay } 619e5c89e4eSSatish Balay PetscFunctionReturn(0); 620e5c89e4eSSatish Balay } 621e5c89e4eSSatish Balay 622e5c89e4eSSatish Balay #undef __FUNCT__ 6231d280d73SBarry Smith #define __FUNCT__ "PetscBinarySynchronizedSeek" 624e5c89e4eSSatish Balay /*@C 6251d280d73SBarry Smith PetscBinarySynchronizedSeek - Moves the file pointer on a PETSc binary file. 626e5c89e4eSSatish Balay 627e5c89e4eSSatish Balay 628e5c89e4eSSatish Balay Input Parameters: 629e5c89e4eSSatish Balay + fd - the file 630e5c89e4eSSatish Balay . whence - if PETSC_BINARY_SEEK_SET then size is an absolute location in the file 631e5c89e4eSSatish Balay if PETSC_BINARY_SEEK_CUR then size is offset from current location 632e5c89e4eSSatish Balay if PETSC_BINARY_SEEK_END then size is offset from end of file 633e5c89e4eSSatish Balay - off - number of bytes to move. Use PETSC_BINARY_INT_SIZE, PETSC_BINARY_SCALAR_SIZE, 634e5c89e4eSSatish Balay etc. in your calculation rather than sizeof() to compute byte lengths. 635e5c89e4eSSatish Balay 636e5c89e4eSSatish Balay Output Parameter: 637e5c89e4eSSatish Balay . offset - new offset in file 638e5c89e4eSSatish Balay 639e5c89e4eSSatish Balay Level: developer 640e5c89e4eSSatish Balay 641e5c89e4eSSatish Balay Notes: 642e5c89e4eSSatish Balay Integers are stored on the file as 32 long, regardless of whether 643e5c89e4eSSatish Balay they are stored in the machine as 32 or 64, this means the same 644e5c89e4eSSatish Balay binary file may be read on any machine. Hence you CANNOT use sizeof() 645e5c89e4eSSatish Balay to determine the offset or location. 646e5c89e4eSSatish Balay 647e5c89e4eSSatish Balay Concepts: binary files^seeking 648e5c89e4eSSatish Balay Concepts: files^seeking in binary 649e5c89e4eSSatish Balay 6504ebed01fSBarry Smith .seealso: PetscBinaryRead(), PetscBinaryWrite(), PetscBinaryOpen(), PetscBinarySynchronizedWrite(), PetscBinarySynchronizedRead(), 6514ebed01fSBarry Smith PetscBinarySynchronizedSeek() 652e5c89e4eSSatish Balay @*/ 6531d280d73SBarry Smith PetscErrorCode PETSC_DLLEXPORT PetscBinarySynchronizedSeek(MPI_Comm comm,int fd,off_t off,PetscBinarySeekType whence,off_t *offset) 654e5c89e4eSSatish Balay { 655e5c89e4eSSatish Balay PetscErrorCode ierr; 656e5c89e4eSSatish Balay PetscMPIInt rank; 657e5c89e4eSSatish Balay 658e5c89e4eSSatish Balay PetscFunctionBegin; 659e5c89e4eSSatish Balay ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 660e5c89e4eSSatish Balay if (!rank) { 661e5c89e4eSSatish Balay ierr = PetscBinarySeek(fd,off,whence,offset);CHKERRQ(ierr); 662e5c89e4eSSatish Balay } 663e5c89e4eSSatish Balay PetscFunctionReturn(0); 664e5c89e4eSSatish Balay } 665e5c89e4eSSatish Balay 666