17d0a6c19SBarry Smith 2e5c89e4eSSatish Balay /* 3e5c89e4eSSatish Balay Code that allows a user to dictate what malloc() PETSc uses. 4e5c89e4eSSatish Balay */ 5c6db04a5SJed Brown #include <petscsys.h> /*I "petscsys.h" I*/ 6e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H) 7e5c89e4eSSatish Balay #include <malloc.h> 8e5c89e4eSSatish Balay #endif 9e5c89e4eSSatish Balay 10e5c89e4eSSatish Balay /* 11e5c89e4eSSatish Balay We want to make sure that all mallocs of double or complex numbers are complex aligned. 12e5c89e4eSSatish Balay 1) on systems with memalign() we call that routine to get an aligned memory location 13e5c89e4eSSatish Balay 2) on systems without memalign() we 14e5c89e4eSSatish Balay - allocate one sizeof(PetscScalar) extra space 15e5c89e4eSSatish Balay - we shift the pointer up slightly if needed to get PetscScalar aligned 160700a824SBarry Smith - if shifted we store at ptr[-1] the amount of shift (plus a classid) 17e5c89e4eSSatish Balay */ 180700a824SBarry Smith #define SHIFT_CLASSID 456123 19e5c89e4eSSatish Balay 20e5c89e4eSSatish Balay #undef __FUNCT__ 21e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocAlign" 22efca3c55SSatish Balay PetscErrorCode PetscMallocAlign(size_t mem,int line,const char func[],const char file[],void **result) 23e5c89e4eSSatish Balay { 24e5c89e4eSSatish Balay #if defined(PETSC_HAVE_DOUBLE_ALIGN_MALLOC) && (PETSC_MEMALIGN == 8) 25e5c89e4eSSatish Balay *result = malloc(mem); 26e5c89e4eSSatish Balay #elif defined(PETSC_HAVE_MEMALIGN) 27e5c89e4eSSatish Balay *result = memalign(PETSC_MEMALIGN,mem); 28e5c89e4eSSatish Balay #else 29e5c89e4eSSatish Balay { 30e5c89e4eSSatish Balay int *ptr,shift; 31e5c89e4eSSatish Balay /* 32e5c89e4eSSatish Balay malloc space for two extra chunks and shift ptr 1 + enough to get it PetscScalar aligned 33e5c89e4eSSatish Balay */ 34e5c89e4eSSatish Balay ptr = (int*)malloc(mem + 2*PETSC_MEMALIGN); 35e5c89e4eSSatish Balay if (ptr) { 36c82284b1SJed Brown shift = (int)(((PETSC_UINTPTR_T) ptr) % PETSC_MEMALIGN); 37e5c89e4eSSatish Balay shift = (2*PETSC_MEMALIGN - shift)/sizeof(int); 380700a824SBarry Smith ptr[shift-1] = shift + SHIFT_CLASSID; 39e5c89e4eSSatish Balay ptr += shift; 40e5c89e4eSSatish Balay *result = (void*)ptr; 41e5c89e4eSSatish Balay } else { 42e5c89e4eSSatish Balay *result = 0; 43e5c89e4eSSatish Balay } 44e5c89e4eSSatish Balay } 45e5c89e4eSSatish Balay #endif 46e32f2f54SBarry Smith if (!*result) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_MEM,"Memory requested %.0f",(PetscLogDouble)mem); 47e5c89e4eSSatish Balay return 0; 48e5c89e4eSSatish Balay } 49e5c89e4eSSatish Balay 50e5c89e4eSSatish Balay #undef __FUNCT__ 51e5c89e4eSSatish Balay #define __FUNCT__ "PetscFreeAlign" 52efca3c55SSatish Balay PetscErrorCode PetscFreeAlign(void *ptr,int line,const char func[],const char file[]) 53e5c89e4eSSatish Balay { 54e5c89e4eSSatish Balay #if (!(defined(PETSC_HAVE_DOUBLE_ALIGN_MALLOC) && (PETSC_MEMALIGN == 8)) && !defined(PETSC_HAVE_MEMALIGN)) 55e5c89e4eSSatish Balay int shift; 56103af891SJed Brown 57103af891SJed Brown if (!ptr) PetscFunctionReturn(0); 58e5c89e4eSSatish Balay /* 59e5c89e4eSSatish Balay Previous int tells us how many ints the pointer has been shifted from 60e5c89e4eSSatish Balay the original address provided by the system malloc(). 61e5c89e4eSSatish Balay */ 620700a824SBarry Smith shift = *(((int*)ptr)-1) - SHIFT_CLASSID; 63efca3c55SSatish Balay if (shift > PETSC_MEMALIGN-1) return PetscError(PETSC_COMM_SELF,line,func,file,PETSC_ERR_PLIB,PETSC_ERROR_INITIAL,"Likely memory corruption in heap"); 64efca3c55SSatish Balay if (shift < 0) return PetscError(PETSC_COMM_SELF,line,func,file,PETSC_ERR_PLIB,PETSC_ERROR_INITIAL,"Likely memory corruption in heap"); 65e5c89e4eSSatish Balay ptr = (void*)(((int*)ptr) - shift); 66e5c89e4eSSatish Balay #endif 67e5c89e4eSSatish Balay 68e5c89e4eSSatish Balay #if defined(PETSC_HAVE_FREE_RETURN_INT) 69e5c89e4eSSatish Balay int err = free(ptr); 70efca3c55SSatish Balay if (err) return PetscError(PETSC_COMM_SELF,line,func,file,PETSC_ERR_PLIB,PETSC_ERROR_INITIAL,"System free returned error %d\n",err); 71e5c89e4eSSatish Balay #else 72e5c89e4eSSatish Balay free(ptr); 73e5c89e4eSSatish Balay #endif 74e5c89e4eSSatish Balay return 0; 75e5c89e4eSSatish Balay } 76e5c89e4eSSatish Balay 77e5c89e4eSSatish Balay /* 78e5c89e4eSSatish Balay We never use the system free directly because on many machines it 79e5c89e4eSSatish Balay does not return an error code. 80e5c89e4eSSatish Balay */ 81e5c89e4eSSatish Balay #undef __FUNCT__ 82e5c89e4eSSatish Balay #define __FUNCT__ "PetscFreeDefault" 83efca3c55SSatish Balay PetscErrorCode PetscFreeDefault(void *ptr,int line,char *func,char *file) 84e5c89e4eSSatish Balay { 85e5c89e4eSSatish Balay #if defined(PETSC_HAVE_FREE_RETURN_INT) 86e5c89e4eSSatish Balay int err = free(ptr); 87efca3c55SSatish Balay if (err) return PetscError(PETSC_COMM_SELF,line,func,file,PETSC_ERR_PLIB,PETSC_ERROR_INITIAL,"System free returned error %d\n",err); 88e5c89e4eSSatish Balay #else 89e5c89e4eSSatish Balay free(ptr); 90e5c89e4eSSatish Balay #endif 91e5c89e4eSSatish Balay return 0; 92e5c89e4eSSatish Balay } 93e5c89e4eSSatish Balay 94efca3c55SSatish Balay PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],void**) = PetscMallocAlign; 95efca3c55SSatish Balay PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[]) = PetscFreeAlign; 96e5c89e4eSSatish Balay 97ace3abfcSBarry Smith PetscBool petscsetmallocvisited = PETSC_FALSE; 98e5c89e4eSSatish Balay 99e5c89e4eSSatish Balay #undef __FUNCT__ 1001d1a0024SBarry Smith #define __FUNCT__ "PetscMallocSet" 101e5c89e4eSSatish Balay /*@C 1021d1a0024SBarry Smith PetscMallocSet - Sets the routines used to do mallocs and frees. 103e5c89e4eSSatish Balay This routine MUST be called before PetscInitialize() and may be 104e5c89e4eSSatish Balay called only once. 105e5c89e4eSSatish Balay 106e5c89e4eSSatish Balay Not Collective 107e5c89e4eSSatish Balay 108e5c89e4eSSatish Balay Input Parameters: 109e5c89e4eSSatish Balay + malloc - the malloc routine 110e5c89e4eSSatish Balay - free - the free routine 111e5c89e4eSSatish Balay 112e5c89e4eSSatish Balay Level: developer 113e5c89e4eSSatish Balay 114e5c89e4eSSatish Balay Concepts: malloc 115e5c89e4eSSatish Balay Concepts: memory^allocation 116e5c89e4eSSatish Balay 117e5c89e4eSSatish Balay @*/ 118efca3c55SSatish Balay PetscErrorCode PetscMallocSet(PetscErrorCode (*imalloc)(size_t,int,const char[],const char[],void**), 119efca3c55SSatish Balay PetscErrorCode (*ifree)(void*,int,const char[],const char[])) 120e5c89e4eSSatish Balay { 121e5c89e4eSSatish Balay PetscFunctionBegin; 122e32f2f54SBarry Smith if (petscsetmallocvisited && (imalloc != PetscTrMalloc || ifree != PetscTrFree)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cannot call multiple times"); 123e5c89e4eSSatish Balay PetscTrMalloc = imalloc; 124e5c89e4eSSatish Balay PetscTrFree = ifree; 125e5c89e4eSSatish Balay petscsetmallocvisited = PETSC_TRUE; 126e5c89e4eSSatish Balay PetscFunctionReturn(0); 127e5c89e4eSSatish Balay } 128e5c89e4eSSatish Balay 129e5c89e4eSSatish Balay #undef __FUNCT__ 1301d1a0024SBarry Smith #define __FUNCT__ "PetscMallocClear" 131e5c89e4eSSatish Balay /*@C 1321d1a0024SBarry Smith PetscMallocClear - Resets the routines used to do mallocs and frees to the 133e5c89e4eSSatish Balay defaults. 134e5c89e4eSSatish Balay 135e5c89e4eSSatish Balay Not Collective 136e5c89e4eSSatish Balay 137e5c89e4eSSatish Balay Level: developer 138e5c89e4eSSatish Balay 139e5c89e4eSSatish Balay Notes: 140e5c89e4eSSatish Balay In general one should never run a PETSc program with different malloc() and 141e5c89e4eSSatish Balay free() settings for different parts; this is because one NEVER wants to 142e5c89e4eSSatish Balay free() an address that was malloced by a different memory management system 143e5c89e4eSSatish Balay 144e5c89e4eSSatish Balay @*/ 1457087cfbeSBarry Smith PetscErrorCode PetscMallocClear(void) 146e5c89e4eSSatish Balay { 147e5c89e4eSSatish Balay PetscFunctionBegin; 148e5c89e4eSSatish Balay PetscTrMalloc = PetscMallocAlign; 149e5c89e4eSSatish Balay PetscTrFree = PetscFreeAlign; 150e5c89e4eSSatish Balay petscsetmallocvisited = PETSC_FALSE; 151e5c89e4eSSatish Balay PetscFunctionReturn(0); 152e5c89e4eSSatish Balay } 153*b44d5720SBarry Smith 154*b44d5720SBarry Smith #undef __FUNCT__ 155*b44d5720SBarry Smith #define __FUNCT__ "PetscMemoryTrace" 156*b44d5720SBarry Smith PetscErrorCode PetscMemoryTrace(const char label[]) 157*b44d5720SBarry Smith { 158*b44d5720SBarry Smith PetscErrorCode ierr; 159*b44d5720SBarry Smith PetscLogDouble mem,mal; 160*b44d5720SBarry Smith static PetscLogDouble oldmem = 0,oldmal = 0; 161*b44d5720SBarry Smith 162*b44d5720SBarry Smith PetscFunctionBegin; 163*b44d5720SBarry Smith ierr = PetscMemoryGetCurrentUsage(&mem);CHKERRQ(ierr); 164*b44d5720SBarry Smith ierr = PetscMallocGetCurrentUsage(&mal);CHKERRQ(ierr); 165*b44d5720SBarry Smith 166*b44d5720SBarry Smith ierr = PetscPrintf(PETSC_COMM_WORLD,"%s High water %8.3f MB increase %8.3f MB Current %8.3f MB increase %8.3f MB\n",label,mem*1e-6,(mem - oldmem)*1e-6,mal*1e-6,(mal - oldmal)*1e-6);CHKERRQ(ierr); 167*b44d5720SBarry Smith oldmem = mem; 168*b44d5720SBarry Smith oldmal = mal; 169*b44d5720SBarry Smith PetscFunctionReturn(0); 170*b44d5720SBarry Smith } 171