xref: /petsc/src/sys/memory/mtr.c (revision 5486ca6011d455dafc0eccae1a1e928ba5067bdc)
17d0a6c19SBarry Smith 
2e5c89e4eSSatish Balay /*
3e5c89e4eSSatish Balay      Interface to malloc() and free(). This code allows for
4e5c89e4eSSatish Balay   logging of memory usage and some error checking
5e5c89e4eSSatish Balay */
6c6db04a5SJed Brown #include <petscsys.h>           /*I "petscsys.h" I*/
7665c2dedSJed Brown #include <petscviewer.h>
8e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H)
9e5c89e4eSSatish Balay #include <malloc.h>
10e5c89e4eSSatish Balay #endif
11e5c89e4eSSatish Balay 
12e5c89e4eSSatish Balay 
13e5c89e4eSSatish Balay /*
14e5c89e4eSSatish Balay      These are defined in mal.c and ensure that malloced space is PetscScalar aligned
15e5c89e4eSSatish Balay */
16efca3c55SSatish Balay extern PetscErrorCode  PetscMallocAlign(size_t,int,const char[],const char[],void**);
17efca3c55SSatish Balay extern PetscErrorCode  PetscFreeAlign(void*,int,const char[],const char[]);
18efca3c55SSatish Balay extern PetscErrorCode  PetscTrMallocDefault(size_t,int,const char[],const char[],void**);
19efca3c55SSatish Balay extern PetscErrorCode  PetscTrFreeDefault(void*,int,const char[],const char[]);
20e5c89e4eSSatish Balay 
21e5c89e4eSSatish Balay 
220700a824SBarry Smith #define CLASSID_VALUE  ((PetscClassId) 0xf0e0d0c9)
230700a824SBarry Smith #define ALREADY_FREED  ((PetscClassId) 0x0f0e0d9c)
24e5c89e4eSSatish Balay 
25e5c89e4eSSatish Balay typedef struct _trSPACE {
26e5c89e4eSSatish Balay   size_t       size;
27e5c89e4eSSatish Balay   int          id;
28e5c89e4eSSatish Balay   int          lineno;
29e5c89e4eSSatish Balay   const char   *filename;
30e5c89e4eSSatish Balay   const char   *functionname;
310700a824SBarry Smith   PetscClassId classid;
328bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
33e5c89e4eSSatish Balay   PetscStack   stack;
34e5c89e4eSSatish Balay #endif
35e5c89e4eSSatish Balay   struct _trSPACE *next,*prev;
36e5c89e4eSSatish Balay } TRSPACE;
37e5c89e4eSSatish Balay 
3825b53cc9SJed Brown /* HEADER_BYTES is the number of bytes in a PetscMalloc() header.
3925b53cc9SJed Brown    It is sizeof(TRSPACE) padded to be a multiple of PETSC_MEMALIGN.
4025b53cc9SJed Brown */
41e5c89e4eSSatish Balay 
42a64a8e02SBarry Smith #define HEADER_BYTES  ((sizeof(TRSPACE)+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1))
43e5c89e4eSSatish Balay 
44e5c89e4eSSatish Balay 
4525b53cc9SJed Brown /* This union is used to insure that the block passed to the user retains
4625b53cc9SJed Brown    a minimum alignment of PETSC_MEMALIGN.
4725b53cc9SJed Brown */
48e5c89e4eSSatish Balay typedef union {
49e5c89e4eSSatish Balay   TRSPACE sp;
5025b53cc9SJed Brown   char    v[HEADER_BYTES];
51e5c89e4eSSatish Balay } TrSPACE;
52e5c89e4eSSatish Balay 
53b022a5c1SBarry Smith 
54e5c89e4eSSatish Balay static size_t    TRallocated  = 0;
55e5c89e4eSSatish Balay static int       TRfrags      = 0;
56f0ba7cfcSLisandro Dalcin static TRSPACE   *TRhead      = NULL;
57e5c89e4eSSatish Balay static int       TRid         = 0;
58ace3abfcSBarry Smith static PetscBool TRdebugLevel = PETSC_FALSE;
59e5c89e4eSSatish Balay static size_t    TRMaxMem     = 0;
60e5c89e4eSSatish Balay /*
61e5c89e4eSSatish Balay       Arrays to log information on all Mallocs
62e5c89e4eSSatish Balay */
63f0ba7cfcSLisandro Dalcin static int        PetscLogMallocMax       = 10000;
64f0ba7cfcSLisandro Dalcin static int        PetscLogMalloc          = -1;
65574034a9SJed Brown static size_t     PetscLogMallocThreshold = 0;
66e5c89e4eSSatish Balay static size_t     *PetscLogMallocLength;
67efca3c55SSatish Balay static const char **PetscLogMallocFile,**PetscLogMallocFunction;
68e5c89e4eSSatish Balay 
69e5c89e4eSSatish Balay #undef __FUNCT__
70b022a5c1SBarry Smith #define __FUNCT__ "PetscSetUseTrMalloc_Private"
71b022a5c1SBarry Smith PetscErrorCode PetscSetUseTrMalloc_Private(void)
72b022a5c1SBarry Smith {
73b022a5c1SBarry Smith   PetscErrorCode ierr;
74b022a5c1SBarry Smith 
75b022a5c1SBarry Smith   PetscFunctionBegin;
76b022a5c1SBarry Smith   ierr = PetscMallocSet(PetscTrMallocDefault,PetscTrFreeDefault);CHKERRQ(ierr);
77a297a907SKarl Rupp 
78b022a5c1SBarry Smith   TRallocated       = 0;
79b022a5c1SBarry Smith   TRfrags           = 0;
80f0ba7cfcSLisandro Dalcin   TRhead            = NULL;
81b022a5c1SBarry Smith   TRid              = 0;
82b022a5c1SBarry Smith   TRdebugLevel      = PETSC_FALSE;
83b022a5c1SBarry Smith   TRMaxMem          = 0;
84b022a5c1SBarry Smith   PetscLogMallocMax = 10000;
85b022a5c1SBarry Smith   PetscLogMalloc    = -1;
86b022a5c1SBarry Smith   PetscFunctionReturn(0);
87b022a5c1SBarry Smith }
88b022a5c1SBarry Smith 
89b022a5c1SBarry Smith #undef __FUNCT__
90e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocValidate"
91e5c89e4eSSatish Balay /*@C
92e5c89e4eSSatish Balay    PetscMallocValidate - Test the memory for corruption.  This can be used to
93e5c89e4eSSatish Balay    check for memory overwrites.
94e5c89e4eSSatish Balay 
95e5c89e4eSSatish Balay    Input Parameter:
96e5c89e4eSSatish Balay +  line - line number where call originated.
97e5c89e4eSSatish Balay .  function - name of function calling
98efca3c55SSatish Balay -  file - file where function is
99e5c89e4eSSatish Balay 
100e5c89e4eSSatish Balay    Return value:
101e5c89e4eSSatish Balay    The number of errors detected.
102e5c89e4eSSatish Balay 
103e5c89e4eSSatish Balay    Output Effect:
104e5c89e4eSSatish Balay    Error messages are written to stdout.
105e5c89e4eSSatish Balay 
106e5c89e4eSSatish Balay    Level: advanced
107e5c89e4eSSatish Balay 
108e5c89e4eSSatish Balay    Notes:
109e5c89e4eSSatish Balay     You should generally use CHKMEMQ as a short cut for calling this
110e5c89e4eSSatish Balay     routine.
111e5c89e4eSSatish Balay 
112efca3c55SSatish Balay     The line, function, file are given by the C preprocessor as
113efca3c55SSatish Balay     __LINE__, __FUNCT__, __FILE__
114e5c89e4eSSatish Balay 
115e5c89e4eSSatish Balay     The Fortran calling sequence is simply PetscMallocValidate(ierr)
116e5c89e4eSSatish Balay 
117e5c89e4eSSatish Balay    No output is generated if there are no problems detected.
118e5c89e4eSSatish Balay 
119e5c89e4eSSatish Balay .seealso: CHKMEMQ
120e5c89e4eSSatish Balay 
121e5c89e4eSSatish Balay @*/
122efca3c55SSatish Balay PetscErrorCode  PetscMallocValidate(int line,const char function[],const char file[])
123e5c89e4eSSatish Balay {
1246c093d5bSvictor   TRSPACE      *head,*lasthead;
125e5c89e4eSSatish Balay   char         *a;
1260700a824SBarry Smith   PetscClassId *nend;
127e5c89e4eSSatish Balay 
128e5c89e4eSSatish Balay   PetscFunctionBegin;
1296c093d5bSvictor   head = TRhead; lasthead = NULL;
130e5c89e4eSSatish Balay   while (head) {
1310700a824SBarry Smith     if (head->classid != CLASSID_VALUE) {
132efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at  %s() line %d in %s\n",function,line,file);
133e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Memory at address %p is corrupted\n",head);
134e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Probably write past beginning or end of array\n");
135efca3c55SSatish Balay       if (lasthead) (*PetscErrorPrintf)("Last intact block allocated in %s() line %d in %s\n",lasthead->functionname,lasthead->lineno,lasthead->filename);
136e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
137e5c89e4eSSatish Balay     }
138e5c89e4eSSatish Balay     a    = (char*)(((TrSPACE*)head) + 1);
1390700a824SBarry Smith     nend = (PetscClassId*)(a + head->size);
1400700a824SBarry Smith     if (*nend != CLASSID_VALUE) {
141efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s\n",function,line,file);
142e5c89e4eSSatish Balay       if (*nend == ALREADY_FREED) {
143e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p already freed\n",head->id,(PetscLogDouble)head->size,a);
144e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
145e5c89e4eSSatish Balay       } else {
146e5c89e4eSSatish Balay         (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
147efca3c55SSatish Balay         (*PetscErrorPrintf)("Memory originally allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
148e32f2f54SBarry Smith         SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," ");
149e5c89e4eSSatish Balay       }
150e5c89e4eSSatish Balay     }
1516c093d5bSvictor     lasthead = head;
152e5c89e4eSSatish Balay     head     = head->next;
153e5c89e4eSSatish Balay   }
154e5c89e4eSSatish Balay   PetscFunctionReturn(0);
155e5c89e4eSSatish Balay }
156e5c89e4eSSatish Balay 
157e5c89e4eSSatish Balay #undef __FUNCT__
158e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrMallocDefault"
159e5c89e4eSSatish Balay /*
160e5c89e4eSSatish Balay     PetscTrMallocDefault - Malloc with tracing.
161e5c89e4eSSatish Balay 
162e5c89e4eSSatish Balay     Input Parameters:
163e5c89e4eSSatish Balay +   a   - number of bytes to allocate
164e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
165e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
166efca3c55SSatish Balay -   filename  - file name where used.  Use __FILE__ for this
167e5c89e4eSSatish Balay 
168e5c89e4eSSatish Balay     Returns:
169e5c89e4eSSatish Balay     double aligned pointer to requested storage, or null if not
170e5c89e4eSSatish Balay     available.
171e5c89e4eSSatish Balay  */
172efca3c55SSatish Balay PetscErrorCode  PetscTrMallocDefault(size_t a,int lineno,const char function[],const char filename[],void **result)
173e5c89e4eSSatish Balay {
174e5c89e4eSSatish Balay   TRSPACE        *head;
175e5c89e4eSSatish Balay   char           *inew;
176e5c89e4eSSatish Balay   size_t         nsize;
177e5c89e4eSSatish Balay   PetscErrorCode ierr;
178e5c89e4eSSatish Balay 
179e5c89e4eSSatish Balay   PetscFunctionBegin;
180f0ba7cfcSLisandro Dalcin   /* Do not try to handle empty blocks */
181f0ba7cfcSLisandro Dalcin   if (!a) { *result = NULL; PetscFunctionReturn(0); }
182f0ba7cfcSLisandro Dalcin 
183e5c89e4eSSatish Balay   if (TRdebugLevel) {
184efca3c55SSatish Balay     ierr = PetscMallocValidate(lineno,function,filename); if (ierr) PetscFunctionReturn(ierr);
185e5c89e4eSSatish Balay   }
186e5c89e4eSSatish Balay 
18725b53cc9SJed Brown   nsize = (a + (PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1);
188efca3c55SSatish Balay   ierr  = PetscMallocAlign(nsize+sizeof(TrSPACE)+sizeof(PetscClassId),lineno,function,filename,(void**)&inew);CHKERRQ(ierr);
189e5c89e4eSSatish Balay 
190e5c89e4eSSatish Balay   head  = (TRSPACE*)inew;
191e5c89e4eSSatish Balay   inew += sizeof(TrSPACE);
192e5c89e4eSSatish Balay 
193e5c89e4eSSatish Balay   if (TRhead) TRhead->prev = head;
194e5c89e4eSSatish Balay   head->next   = TRhead;
195e5c89e4eSSatish Balay   TRhead       = head;
196f0ba7cfcSLisandro Dalcin   head->prev   = NULL;
197e5c89e4eSSatish Balay   head->size   = nsize;
198e5c89e4eSSatish Balay   head->id     = TRid;
199e5c89e4eSSatish Balay   head->lineno = lineno;
200e5c89e4eSSatish Balay 
201e5c89e4eSSatish Balay   head->filename                 = filename;
202e5c89e4eSSatish Balay   head->functionname             = function;
2030700a824SBarry Smith   head->classid                  = CLASSID_VALUE;
2040700a824SBarry Smith   *(PetscClassId*)(inew + nsize) = CLASSID_VALUE;
205e5c89e4eSSatish Balay 
206e5c89e4eSSatish Balay   TRallocated += nsize;
207a297a907SKarl Rupp   if (TRallocated > TRMaxMem) TRMaxMem = TRallocated;
208e5c89e4eSSatish Balay   TRfrags++;
209e5c89e4eSSatish Balay 
2108bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
21176386721SLisandro Dalcin   if (PetscStackActive()) {
2125c25fcd7SBarry Smith     ierr = PetscStackCopy(petscstack,&head->stack);CHKERRQ(ierr);
2132c9581d2SBarry Smith     /* fix the line number to where the malloc() was called, not the PetscFunctionBegin; */
2142c9581d2SBarry Smith     head->stack.line[head->stack.currentsize-2] = lineno;
21576386721SLisandro Dalcin   }
216e5c89e4eSSatish Balay #endif
217e5c89e4eSSatish Balay 
218e5c89e4eSSatish Balay   /*
219e5c89e4eSSatish Balay          Allow logging of all mallocs made
220e5c89e4eSSatish Balay   */
221574034a9SJed Brown   if (PetscLogMalloc > -1 && PetscLogMalloc < PetscLogMallocMax && a >= PetscLogMallocThreshold) {
222e5c89e4eSSatish Balay     if (!PetscLogMalloc) {
223e5c89e4eSSatish Balay       PetscLogMallocLength = (size_t*)malloc(PetscLogMallocMax*sizeof(size_t));
224e32f2f54SBarry Smith       if (!PetscLogMallocLength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
225a297a907SKarl Rupp 
226a2ea699eSBarry Smith       PetscLogMallocFile = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
227e32f2f54SBarry Smith       if (!PetscLogMallocFile) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
228a297a907SKarl Rupp 
229a2ea699eSBarry Smith       PetscLogMallocFunction = (const char**)malloc(PetscLogMallocMax*sizeof(char*));
230e32f2f54SBarry Smith       if (!PetscLogMallocFunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," ");
231e5c89e4eSSatish Balay     }
232e5c89e4eSSatish Balay     PetscLogMallocLength[PetscLogMalloc]     = nsize;
233e5c89e4eSSatish Balay     PetscLogMallocFile[PetscLogMalloc]       = filename;
234e5c89e4eSSatish Balay     PetscLogMallocFunction[PetscLogMalloc++] = function;
235e5c89e4eSSatish Balay   }
236e5c89e4eSSatish Balay   *result = (void*)inew;
237e5c89e4eSSatish Balay   PetscFunctionReturn(0);
238e5c89e4eSSatish Balay }
239e5c89e4eSSatish Balay 
240e5c89e4eSSatish Balay 
241e5c89e4eSSatish Balay #undef __FUNCT__
242e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrFreeDefault"
243e5c89e4eSSatish Balay /*
244e5c89e4eSSatish Balay    PetscTrFreeDefault - Free with tracing.
245e5c89e4eSSatish Balay 
246e5c89e4eSSatish Balay    Input Parameters:
247e5c89e4eSSatish Balay .   a    - pointer to a block allocated with PetscTrMalloc
248e5c89e4eSSatish Balay .   lineno - line number where used.  Use __LINE__ for this
249e5c89e4eSSatish Balay .   function - function calling routine. Use __FUNCT__ for this
250e5c89e4eSSatish Balay .   file  - file name where used.  Use __FILE__ for this
251e5c89e4eSSatish Balay  */
252efca3c55SSatish Balay PetscErrorCode  PetscTrFreeDefault(void *aa,int line,const char function[],const char file[])
253e5c89e4eSSatish Balay {
254e5c89e4eSSatish Balay   char           *a = (char*)aa;
255e5c89e4eSSatish Balay   TRSPACE        *head;
256e5c89e4eSSatish Balay   char           *ahead;
257e5c89e4eSSatish Balay   PetscErrorCode ierr;
2580700a824SBarry Smith   PetscClassId   *nend;
259e5c89e4eSSatish Balay 
260e5c89e4eSSatish Balay   PetscFunctionBegin;
261e5c89e4eSSatish Balay   /* Do not try to handle empty blocks */
26249d7da52SJed Brown   if (!a) PetscFunctionReturn(0);
263e5c89e4eSSatish Balay 
264e5c89e4eSSatish Balay   if (TRdebugLevel) {
265efca3c55SSatish Balay     ierr = PetscMallocValidate(line,function,file);CHKERRQ(ierr);
266e5c89e4eSSatish Balay   }
267e5c89e4eSSatish Balay 
268e5c89e4eSSatish Balay   ahead = a;
269e5c89e4eSSatish Balay   a     = a - sizeof(TrSPACE);
270e5c89e4eSSatish Balay   head  = (TRSPACE*)a;
271e5c89e4eSSatish Balay 
2720700a824SBarry Smith   if (head->classid != CLASSID_VALUE) {
273efca3c55SSatish Balay     (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
274e5c89e4eSSatish Balay     (*PetscErrorPrintf)("Block at address %p is corrupted; cannot free;\nmay be block not allocated with PetscMalloc()\n",a);
275e32f2f54SBarry Smith     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Bad location or corrupted memory");
276e5c89e4eSSatish Balay   }
2770700a824SBarry Smith   nend = (PetscClassId*)(ahead + head->size);
2780700a824SBarry Smith   if (*nend != CLASSID_VALUE) {
279e5c89e4eSSatish Balay     if (*nend == ALREADY_FREED) {
280efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
281e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p was already freed\n",head->id,(PetscLogDouble)head->size,a + sizeof(TrSPACE));
282e5c89e4eSSatish Balay       if (head->lineno > 0 && head->lineno < 50000 /* sanity check */) {
283efca3c55SSatish Balay         (*PetscErrorPrintf)("Block freed in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
284e5c89e4eSSatish Balay       } else {
285efca3c55SSatish Balay         (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,-head->lineno,head->filename);
286e5c89e4eSSatish Balay       }
287e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Memory already freed");
288e5c89e4eSSatish Balay     } else {
289e5c89e4eSSatish Balay       /* Damaged tail */
290efca3c55SSatish Balay       (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s\n",function,line,file);
291e5c89e4eSSatish Balay       (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a);
292efca3c55SSatish Balay       (*PetscErrorPrintf)("Block allocated in %s() line %d in %s\n",head->functionname,head->lineno,head->filename);
293e32f2f54SBarry Smith       SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Corrupted memory");
294e5c89e4eSSatish Balay     }
295e5c89e4eSSatish Balay   }
296e5c89e4eSSatish Balay   /* Mark the location freed */
297e5c89e4eSSatish Balay   *nend = ALREADY_FREED;
298e5c89e4eSSatish Balay   /* Save location where freed.  If we suspect the line number, mark as  allocated location */
299e5c89e4eSSatish Balay   if (line > 0 && line < 50000) {
300e5c89e4eSSatish Balay     head->lineno       = line;
301e5c89e4eSSatish Balay     head->filename     = file;
302e5c89e4eSSatish Balay     head->functionname = function;
303e5c89e4eSSatish Balay   } else {
304e5c89e4eSSatish Balay     head->lineno = -head->lineno;
305e5c89e4eSSatish Balay   }
306e5c89e4eSSatish Balay   /* zero out memory - helps to find some reuse of already freed memory */
307e5c89e4eSSatish Balay   ierr = PetscMemzero(aa,head->size);CHKERRQ(ierr);
308e5c89e4eSSatish Balay 
309e5c89e4eSSatish Balay   TRallocated -= head->size;
310e5c89e4eSSatish Balay   TRfrags--;
311e5c89e4eSSatish Balay   if (head->prev) head->prev->next = head->next;
312e5c89e4eSSatish Balay   else TRhead = head->next;
313e5c89e4eSSatish Balay 
314e5c89e4eSSatish Balay   if (head->next) head->next->prev = head->prev;
315efca3c55SSatish Balay   ierr = PetscFreeAlign(a,line,function,file);CHKERRQ(ierr);
316e5c89e4eSSatish Balay   PetscFunctionReturn(0);
317e5c89e4eSSatish Balay }
318e5c89e4eSSatish Balay 
319e5c89e4eSSatish Balay 
320e5c89e4eSSatish Balay #undef __FUNCT__
3210841954dSBarry Smith #define __FUNCT__ "PetscMemoryView"
322fe7fb379SMatthew Knepley /*@C
3230841954dSBarry Smith     PetscMemoryView - Shows the amount of memory currently being used
324e5c89e4eSSatish Balay         in a communicator.
325e5c89e4eSSatish Balay 
326e5c89e4eSSatish Balay     Collective on PetscViewer
327e5c89e4eSSatish Balay 
328e5c89e4eSSatish Balay     Input Parameter:
329e5c89e4eSSatish Balay +    viewer - the viewer that defines the communicator
330e5c89e4eSSatish Balay -    message - string printed before values
331e5c89e4eSSatish Balay 
3320841954dSBarry Smith     Options Database:
3330841954dSBarry Smith +    -malloc - have PETSc track how much memory it has allocated
3340841954dSBarry Smith -    -memory_view - during PetscFinalize() have this routine called
3350841954dSBarry Smith 
336e5c89e4eSSatish Balay     Level: intermediate
337e5c89e4eSSatish Balay 
338e5c89e4eSSatish Balay     Concepts: memory usage
339e5c89e4eSSatish Balay 
3400841954dSBarry Smith .seealso: PetscMallocDump(), PetscMemoryGetCurrentUsage(), PetscMemorySetGetMaximumUsage()
341e5c89e4eSSatish Balay  @*/
3420841954dSBarry Smith PetscErrorCode  PetscMemoryView(PetscViewer viewer,const char message[])
343e5c89e4eSSatish Balay {
3440841954dSBarry Smith   PetscLogDouble allocated,allocatedmax,resident,residentmax,gallocated,gallocatedmax,gresident,gresidentmax,maxgallocated,maxgallocatedmax,maxgresident,maxgresidentmax;
3450841954dSBarry Smith   PetscLogDouble mingallocated,mingallocatedmax,mingresident,mingresidentmax;
346e5c89e4eSSatish Balay   PetscErrorCode ierr;
347e5c89e4eSSatish Balay   MPI_Comm       comm;
348e5c89e4eSSatish Balay 
349e5c89e4eSSatish Balay   PetscFunctionBegin;
350e5c89e4eSSatish Balay   if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD;
351e5c89e4eSSatish Balay   ierr = PetscMallocGetCurrentUsage(&allocated);CHKERRQ(ierr);
3520841954dSBarry Smith   ierr = PetscMallocGetMaximumUsage(&allocatedmax);CHKERRQ(ierr);
353e5c89e4eSSatish Balay   ierr = PetscMemoryGetCurrentUsage(&resident);CHKERRQ(ierr);
354e5c89e4eSSatish Balay   ierr = PetscMemoryGetMaximumUsage(&residentmax);CHKERRQ(ierr);
355e5c89e4eSSatish Balay   if (residentmax > 0) residentmax = PetscMax(resident,residentmax);
356e5c89e4eSSatish Balay   ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr);
357e5c89e4eSSatish Balay   ierr = PetscViewerASCIIPrintf(viewer,message);CHKERRQ(ierr);
358e5c89e4eSSatish Balay   if (resident && residentmax && allocated) {
3590841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&gresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3600841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&maxgresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3610841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&mingresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3620841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Maximum (over computational time) process memory:        total %5.4e max %5.4e min %5.4e\n",gresidentmax,maxgresidentmax,mingresidentmax);CHKERRQ(ierr);
3630841954dSBarry Smith     ierr = MPI_Reduce(&resident,&gresident,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3640841954dSBarry Smith     ierr = MPI_Reduce(&resident,&maxgresident,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3650841954dSBarry Smith     ierr = MPI_Reduce(&resident,&mingresident,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3660841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current process memory:                                  total %5.4e max %5.4e min %5.4e\n",gresident,maxgresident,mingresident);CHKERRQ(ierr);
3670841954dSBarry Smith     ierr = MPI_Reduce(&allocatedmax,&gallocatedmax,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3680841954dSBarry Smith     ierr = MPI_Reduce(&allocatedmax,&maxgallocatedmax,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3690841954dSBarry Smith     ierr = MPI_Reduce(&allocatedmax,&mingallocatedmax,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3700841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Maximum (over computational time) space PetscMalloc()ed: total %5.4e max %5.4e min %5.4e\n",gallocatedmax,maxgallocatedmax,mingallocatedmax);CHKERRQ(ierr);
3710841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&gallocated,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3720841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&maxgallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3730841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&mingallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3740841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current space PetscMalloc()ed:                           total %5.4e max %5.4e min %5.4e\n",gallocated,maxgallocated,mingallocated);CHKERRQ(ierr);
375e5c89e4eSSatish Balay   } else if (resident && residentmax) {
3760841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&gresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3770841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&maxgresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3780841954dSBarry Smith     ierr = MPI_Reduce(&residentmax,&mingresidentmax,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3790841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Maximum (over computational time) process memory:        total %5.4e max %5.4e min %5.4e\n",gresidentmax,maxgresidentmax,mingresidentmax);CHKERRQ(ierr);
3800841954dSBarry Smith     ierr = MPI_Reduce(&resident,&gresident,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3810841954dSBarry Smith     ierr = MPI_Reduce(&resident,&maxgresident,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3820841954dSBarry Smith     ierr = MPI_Reduce(&resident,&mingresident,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3830841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current process memory:                                  total %5.4e max %5.4e min %5.4e\n",gresident,maxgresident,mingresident);CHKERRQ(ierr);
384e5c89e4eSSatish Balay   } else if (resident && allocated) {
3850841954dSBarry Smith     ierr = MPI_Reduce(&resident,&gresident,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3860841954dSBarry Smith     ierr = MPI_Reduce(&resident,&maxgresident,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3870841954dSBarry Smith     ierr = MPI_Reduce(&resident,&mingresident,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3880841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current process memory:                                  total %5.4e max %5.4e min %5.4e\n",gresident,maxgresident,mingresident);CHKERRQ(ierr);
3890841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&gallocated,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3900841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&maxgallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3910841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&mingallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3920841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current space PetscMalloc()ed:                           total %5.4e max %5.4e min %5.4e\n",gallocated,maxgallocated,mingallocated);CHKERRQ(ierr);
3930841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Run with -memory_view to get maximum memory usage\n");CHKERRQ(ierr);
394e5c89e4eSSatish Balay   } else if (allocated) {
3950841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&gallocated,1,MPIU_PETSCLOGDOUBLE,MPI_SUM,0,comm);CHKERRQ(ierr);
3960841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&maxgallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MAX,0,comm);CHKERRQ(ierr);
3970841954dSBarry Smith     ierr = MPI_Reduce(&allocated,&mingallocated,1,MPIU_PETSCLOGDOUBLE,MPI_MIN,0,comm);CHKERRQ(ierr);
3980841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Current space PetscMalloc()ed:                           total %5.4e max %5.4e min %5.4e\n",gallocated,maxgallocated,mingallocated);CHKERRQ(ierr);
3990841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"Run with -memory_view to get maximum memory usage\n");CHKERRQ(ierr);
4000841954dSBarry Smith     ierr = PetscViewerASCIIPrintf(viewer,"OS cannot compute process memory\n");CHKERRQ(ierr);
401e5c89e4eSSatish Balay   } else {
402e5c89e4eSSatish Balay     ierr = PetscViewerASCIIPrintf(viewer,"Run with -malloc to get statistics on PetscMalloc() calls\nOS cannot compute process memory\n");CHKERRQ(ierr);
403e5c89e4eSSatish Balay   }
404e5c89e4eSSatish Balay   ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
405e5c89e4eSSatish Balay   PetscFunctionReturn(0);
406e5c89e4eSSatish Balay }
407e5c89e4eSSatish Balay 
408e5c89e4eSSatish Balay #undef __FUNCT__
409e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetCurrentUsage"
410e5c89e4eSSatish Balay /*@C
411e5c89e4eSSatish Balay     PetscMallocGetCurrentUsage - gets the current amount of memory used that was PetscMalloc()ed
412e5c89e4eSSatish Balay 
413e5c89e4eSSatish Balay     Not Collective
414e5c89e4eSSatish Balay 
415e5c89e4eSSatish Balay     Output Parameters:
416e5c89e4eSSatish Balay .   space - number of bytes currently allocated
417e5c89e4eSSatish Balay 
418e5c89e4eSSatish Balay     Level: intermediate
419e5c89e4eSSatish Balay 
420e5c89e4eSSatish Balay     Concepts: memory usage
421e5c89e4eSSatish Balay 
422e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
423e5c89e4eSSatish Balay           PetscMemoryGetMaximumUsage()
424e5c89e4eSSatish Balay  @*/
4257087cfbeSBarry Smith PetscErrorCode  PetscMallocGetCurrentUsage(PetscLogDouble *space)
426e5c89e4eSSatish Balay {
427e5c89e4eSSatish Balay   PetscFunctionBegin;
428e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRallocated;
429e5c89e4eSSatish Balay   PetscFunctionReturn(0);
430e5c89e4eSSatish Balay }
431e5c89e4eSSatish Balay 
432e5c89e4eSSatish Balay #undef __FUNCT__
433e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetMaximumUsage"
434e5c89e4eSSatish Balay /*@C
435e5c89e4eSSatish Balay     PetscMallocGetMaximumUsage - gets the maximum amount of memory used that was PetscMalloc()ed at any time
436e5c89e4eSSatish Balay         during this run.
437e5c89e4eSSatish Balay 
438e5c89e4eSSatish Balay     Not Collective
439e5c89e4eSSatish Balay 
440e5c89e4eSSatish Balay     Output Parameters:
441e5c89e4eSSatish Balay .   space - maximum number of bytes ever allocated at one time
442e5c89e4eSSatish Balay 
443e5c89e4eSSatish Balay     Level: intermediate
444e5c89e4eSSatish Balay 
445e5c89e4eSSatish Balay     Concepts: memory usage
446e5c89e4eSSatish Balay 
447e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(),
448e5c89e4eSSatish Balay           PetscMemoryGetCurrentUsage()
449e5c89e4eSSatish Balay  @*/
4507087cfbeSBarry Smith PetscErrorCode  PetscMallocGetMaximumUsage(PetscLogDouble *space)
451e5c89e4eSSatish Balay {
452e5c89e4eSSatish Balay   PetscFunctionBegin;
453e5c89e4eSSatish Balay   *space = (PetscLogDouble) TRMaxMem;
454e5c89e4eSSatish Balay   PetscFunctionReturn(0);
455e5c89e4eSSatish Balay }
456e5c89e4eSSatish Balay 
457a64a8e02SBarry Smith #if defined(PETSC_USE_DEBUG)
458a64a8e02SBarry Smith #undef __FUNCT__
459a64a8e02SBarry Smith #define __FUNCT__ "PetscMallocGetStack"
460a64a8e02SBarry Smith /*@C
461a64a8e02SBarry Smith    PetscMallocGetStack - returns a pointer to the stack for the location in the program a call to PetscMalloc() was used to obtain that memory
462a64a8e02SBarry Smith 
463a64a8e02SBarry Smith    Collective on PETSC_COMM_WORLD
464a64a8e02SBarry Smith 
465a64a8e02SBarry Smith    Input Parameter:
466a64a8e02SBarry Smith .    ptr - the memory location
467a64a8e02SBarry Smith 
468a64a8e02SBarry Smith    Output Paramter:
469a64a8e02SBarry Smith .    stack - the stack indicating where the program allocated this memory
470a64a8e02SBarry Smith 
471a64a8e02SBarry Smith    Level: intermediate
472a64a8e02SBarry Smith 
473a64a8e02SBarry Smith .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
474a64a8e02SBarry Smith @*/
475a64a8e02SBarry Smith PetscErrorCode  PetscMallocGetStack(void *ptr,PetscStack **stack)
476a64a8e02SBarry Smith {
477a64a8e02SBarry Smith   TRSPACE *head;
478a64a8e02SBarry Smith 
479a64a8e02SBarry Smith   PetscFunctionBegin;
480a64a8e02SBarry Smith   head   = (TRSPACE*) (((char*)ptr) - HEADER_BYTES);
481a64a8e02SBarry Smith   *stack = &head->stack;
482a64a8e02SBarry Smith   PetscFunctionReturn(0);
483a64a8e02SBarry Smith }
48476386721SLisandro Dalcin #else
48576386721SLisandro Dalcin #undef __FUNCT__
48676386721SLisandro Dalcin #define __FUNCT__ "PetscMallocGetStack"
48776386721SLisandro Dalcin PetscErrorCode  PetscMallocGetStack(void *ptr,void **stack)
48876386721SLisandro Dalcin {
48976386721SLisandro Dalcin   PetscFunctionBegin;
490f0ba7cfcSLisandro Dalcin   *stack = NULL;
49176386721SLisandro Dalcin   PetscFunctionReturn(0);
49276386721SLisandro Dalcin }
493a64a8e02SBarry Smith #endif
494a64a8e02SBarry Smith 
495e5c89e4eSSatish Balay #undef __FUNCT__
496e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDump"
497e5c89e4eSSatish Balay /*@C
498e5c89e4eSSatish Balay    PetscMallocDump - Dumps the allocated memory blocks to a file. The information
499e5c89e4eSSatish Balay    printed is: size of space (in bytes), address of space, id of space,
500e5c89e4eSSatish Balay    file in which space was allocated, and line number at which it was
501e5c89e4eSSatish Balay    allocated.
502e5c89e4eSSatish Balay 
503e5c89e4eSSatish Balay    Collective on PETSC_COMM_WORLD
504e5c89e4eSSatish Balay 
505e5c89e4eSSatish Balay    Input Parameter:
506e5c89e4eSSatish Balay .  fp  - file pointer.  If fp is NULL, stdout is assumed.
507e5c89e4eSSatish Balay 
508e5c89e4eSSatish Balay    Options Database Key:
509e5c89e4eSSatish Balay .  -malloc_dump - Dumps unfreed memory during call to PetscFinalize()
510e5c89e4eSSatish Balay 
511e5c89e4eSSatish Balay    Level: intermediate
512e5c89e4eSSatish Balay 
513e5c89e4eSSatish Balay    Fortran Note:
514e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDump(integer ierr)
515e5c89e4eSSatish Balay    The fp defaults to stdout.
516e5c89e4eSSatish Balay 
517e5c89e4eSSatish Balay    Notes: uses MPI_COMM_WORLD, because this may be called in PetscFinalize() after PETSC_COMM_WORLD
518e5c89e4eSSatish Balay           has been freed.
519e5c89e4eSSatish Balay 
520e5c89e4eSSatish Balay    Concepts: memory usage
521e5c89e4eSSatish Balay    Concepts: memory bleeding
522e5c89e4eSSatish Balay    Concepts: bleeding memory
523e5c89e4eSSatish Balay 
5249e9a1f8fSvictor .seealso:  PetscMallocGetCurrentUsage(), PetscMallocDumpLog()
525e5c89e4eSSatish Balay @*/
5267087cfbeSBarry Smith PetscErrorCode  PetscMallocDump(FILE *fp)
527e5c89e4eSSatish Balay {
528e5c89e4eSSatish Balay   TRSPACE        *head;
529*5486ca60SMatthew G. Knepley   PetscInt       libAlloc = 0;
530e5c89e4eSSatish Balay   PetscErrorCode ierr;
531e5c89e4eSSatish Balay   PetscMPIInt    rank;
532e5c89e4eSSatish Balay 
533e5c89e4eSSatish Balay   PetscFunctionBegin;
534e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
535da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
536e5c89e4eSSatish Balay   head = TRhead;
537e5c89e4eSSatish Balay   while (head) {
538*5486ca60SMatthew G. Knepley     PetscBool isLib;
539*5486ca60SMatthew G. Knepley 
540*5486ca60SMatthew G. Knepley     ierr = PetscStrcmp(head->functionname, "PetscDLLibraryOpen", &isLib);CHKERRQ(ierr);
541*5486ca60SMatthew G. Knepley     libAlloc += head->size;
542*5486ca60SMatthew G. Knepley     head = head->next;
543*5486ca60SMatthew G. Knepley   }
544*5486ca60SMatthew G. Knepley   if (TRallocated - libAlloc > 0) fprintf(fp,"[%d]Total space allocated %.0f bytes\n",rank,(PetscLogDouble)TRallocated);
545*5486ca60SMatthew G. Knepley   head = TRhead;
546*5486ca60SMatthew G. Knepley   while (head) {
547*5486ca60SMatthew G. Knepley     PetscBool isLib;
548*5486ca60SMatthew G. Knepley 
549*5486ca60SMatthew G. Knepley     ierr = PetscStrcmp(head->functionname, "PetscDLLibraryOpen", &isLib);CHKERRQ(ierr);
550*5486ca60SMatthew G. Knepley     if (!isLib) {
551efca3c55SSatish Balay       fprintf(fp,"[%2d]%.0f bytes %s() line %d in %s\n",rank,(PetscLogDouble)head->size,head->functionname,head->lineno,head->filename);
5528bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG)
553e5c89e4eSSatish Balay       ierr = PetscStackPrint(&head->stack,fp);CHKERRQ(ierr);
554e5c89e4eSSatish Balay #endif
555*5486ca60SMatthew G. Knepley     }
556e5c89e4eSSatish Balay     head = head->next;
557e5c89e4eSSatish Balay   }
558e5c89e4eSSatish Balay   PetscFunctionReturn(0);
559e5c89e4eSSatish Balay }
560e5c89e4eSSatish Balay 
561e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
562e5c89e4eSSatish Balay 
563e5c89e4eSSatish Balay #undef __FUNCT__
564e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocSetDumpLog"
565e5c89e4eSSatish Balay /*@C
566e5c89e4eSSatish Balay     PetscMallocSetDumpLog - Activates logging of all calls to PetscMalloc().
567e5c89e4eSSatish Balay 
568e5c89e4eSSatish Balay     Not Collective
569e5c89e4eSSatish Balay 
570e5c89e4eSSatish Balay     Options Database Key:
571574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
572574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
573e5c89e4eSSatish Balay 
574e5c89e4eSSatish Balay     Level: advanced
575e5c89e4eSSatish Balay 
576574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLogThreshold()
577e5c89e4eSSatish Balay @*/
5787087cfbeSBarry Smith PetscErrorCode PetscMallocSetDumpLog(void)
579e5c89e4eSSatish Balay {
58021b680ceSJed Brown   PetscErrorCode ierr;
58121b680ceSJed Brown 
582e5c89e4eSSatish Balay   PetscFunctionBegin;
583e5c89e4eSSatish Balay   PetscLogMalloc = 0;
584a297a907SKarl Rupp 
58521b680ceSJed Brown   ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr);
586e5c89e4eSSatish Balay   PetscFunctionReturn(0);
587e5c89e4eSSatish Balay }
588e5c89e4eSSatish Balay 
589e5c89e4eSSatish Balay #undef __FUNCT__
590574034a9SJed Brown #define __FUNCT__ "PetscMallocSetDumpLogThreshold"
591574034a9SJed Brown /*@C
592574034a9SJed Brown     PetscMallocSetDumpLogThreshold - Activates logging of all calls to PetscMalloc().
593574034a9SJed Brown 
594574034a9SJed Brown     Not Collective
595574034a9SJed Brown 
596574034a9SJed Brown     Input Arguments:
597574034a9SJed Brown .   logmin - minimum allocation size to log, or PETSC_DEFAULT
598574034a9SJed Brown 
599574034a9SJed Brown     Options Database Key:
600574034a9SJed Brown +  -malloc_log <filename> - Activates PetscMallocDumpLog()
601574034a9SJed Brown -  -malloc_log_threshold <min> - Activates logging and sets a minimum size
602574034a9SJed Brown 
603574034a9SJed Brown     Level: advanced
604574034a9SJed Brown 
605574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLog()
606574034a9SJed Brown @*/
607574034a9SJed Brown PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble logmin)
608574034a9SJed Brown {
609574034a9SJed Brown   PetscErrorCode ierr;
610574034a9SJed Brown 
611574034a9SJed Brown   PetscFunctionBegin;
612574034a9SJed Brown   ierr = PetscMallocSetDumpLog();CHKERRQ(ierr);
613574034a9SJed Brown   if (logmin < 0) logmin = 0.0; /* PETSC_DEFAULT or PETSC_DECIDE */
614574034a9SJed Brown   PetscLogMallocThreshold = (size_t)logmin;
615574034a9SJed Brown   PetscFunctionReturn(0);
616574034a9SJed Brown }
617574034a9SJed Brown 
618574034a9SJed Brown #undef __FUNCT__
61918a2528dSJed Brown #define __FUNCT__ "PetscMallocGetDumpLog"
62018a2528dSJed Brown /*@C
62118a2528dSJed Brown     PetscMallocGetDumpLog - Determine whether all calls to PetscMalloc() are being logged
62218a2528dSJed Brown 
62318a2528dSJed Brown     Not Collective
62418a2528dSJed Brown 
62518a2528dSJed Brown     Output Arguments
62618a2528dSJed Brown .   logging - PETSC_TRUE if logging is active
62718a2528dSJed Brown 
62818a2528dSJed Brown     Options Database Key:
62918a2528dSJed Brown .  -malloc_log - Activates PetscMallocDumpLog()
63018a2528dSJed Brown 
63118a2528dSJed Brown     Level: advanced
63218a2528dSJed Brown 
63318a2528dSJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog()
63418a2528dSJed Brown @*/
63518a2528dSJed Brown PetscErrorCode PetscMallocGetDumpLog(PetscBool *logging)
63618a2528dSJed Brown {
63718a2528dSJed Brown 
63818a2528dSJed Brown   PetscFunctionBegin;
63918a2528dSJed Brown   *logging = (PetscBool)(PetscLogMalloc >= 0);
64018a2528dSJed Brown   PetscFunctionReturn(0);
64118a2528dSJed Brown }
64218a2528dSJed Brown 
64318a2528dSJed Brown #undef __FUNCT__
644e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDumpLog"
645e5c89e4eSSatish Balay /*@C
646e5c89e4eSSatish Balay     PetscMallocDumpLog - Dumps the log of all calls to PetscMalloc(); also calls
64721b680ceSJed Brown        PetscMemoryGetMaximumUsage()
648e5c89e4eSSatish Balay 
649e5c89e4eSSatish Balay     Collective on PETSC_COMM_WORLD
650e5c89e4eSSatish Balay 
651e5c89e4eSSatish Balay     Input Parameter:
6520298fd71SBarry Smith .   fp - file pointer; or NULL
653e5c89e4eSSatish Balay 
654e5c89e4eSSatish Balay     Options Database Key:
655e5c89e4eSSatish Balay .  -malloc_log - Activates PetscMallocDumpLog()
656e5c89e4eSSatish Balay 
657e5c89e4eSSatish Balay     Level: advanced
658e5c89e4eSSatish Balay 
659e5c89e4eSSatish Balay    Fortran Note:
660e5c89e4eSSatish Balay    The calling sequence in Fortran is PetscMallocDumpLog(integer ierr)
661e5c89e4eSSatish Balay    The fp defaults to stdout.
662e5c89e4eSSatish Balay 
663e5c89e4eSSatish Balay .seealso: PetscMallocGetCurrentUsage(), PetscMallocDump(), PetscMallocSetDumpLog()
664e5c89e4eSSatish Balay @*/
6657087cfbeSBarry Smith PetscErrorCode  PetscMallocDumpLog(FILE *fp)
666e5c89e4eSSatish Balay {
667e5c89e4eSSatish Balay   PetscInt       i,j,n,dummy,*perm;
668e5c89e4eSSatish Balay   size_t         *shortlength;
669f56c2debSBarry Smith   int            *shortcount,err;
670e5c89e4eSSatish Balay   PetscMPIInt    rank,size,tag = 1212 /* very bad programming */;
671ace3abfcSBarry Smith   PetscBool      match;
672e5c89e4eSSatish Balay   const char     **shortfunction;
673e5c89e4eSSatish Balay   PetscLogDouble rss;
674e5c89e4eSSatish Balay   MPI_Status     status;
675e5c89e4eSSatish Balay   PetscErrorCode ierr;
676e5c89e4eSSatish Balay 
677e5c89e4eSSatish Balay   PetscFunctionBegin;
678e5c89e4eSSatish Balay   ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr);
679e5c89e4eSSatish Balay   ierr = MPI_Comm_size(MPI_COMM_WORLD,&size);CHKERRQ(ierr);
680e5c89e4eSSatish Balay   /*
681e5c89e4eSSatish Balay        Try to get the data printed in order by processor. This will only sometimes work
682e5c89e4eSSatish Balay   */
683f56c2debSBarry Smith   err = fflush(fp);
684e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
685f56c2debSBarry Smith 
686e5c89e4eSSatish Balay   ierr = MPI_Barrier(MPI_COMM_WORLD);CHKERRQ(ierr);
687e5c89e4eSSatish Balay   if (rank) {
688e5c89e4eSSatish Balay     ierr = MPI_Recv(&dummy,1,MPIU_INT,rank-1,tag,MPI_COMM_WORLD,&status);CHKERRQ(ierr);
689e5c89e4eSSatish Balay   }
690e5c89e4eSSatish Balay 
691768aa557SSatish Balay   if (PetscLogMalloc < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"PetscMallocDumpLog() called without call to PetscMallocSetDumpLog() this is often due to\n                      setting the option -malloc_log AFTER PetscInitialize() with PetscOptionsInsert() or PetscOptionsInsertFile()");
692768aa557SSatish Balay 
693da9f1d6bSBarry Smith   if (!fp) fp = PETSC_STDOUT;
694f3d65365SJed Brown   ierr = PetscMemoryGetMaximumUsage(&rss);CHKERRQ(ierr);
695e5c89e4eSSatish Balay   if (rss) {
696f3d65365SJed Brown     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f maximum size of entire process %.0f\n",rank,(PetscLogDouble)TRMaxMem,rss);CHKERRQ(ierr);
697e5c89e4eSSatish Balay   } else {
698e5c89e4eSSatish Balay     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f OS cannot compute size of entire process\n",rank,(PetscLogDouble)TRMaxMem);CHKERRQ(ierr);
699e5c89e4eSSatish Balay   }
700e32f2f54SBarry Smith   shortcount    = (int*)malloc(PetscLogMalloc*sizeof(int));if (!shortcount) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
701e32f2f54SBarry Smith   shortlength   = (size_t*)malloc(PetscLogMalloc*sizeof(size_t));if (!shortlength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
702e32f2f54SBarry Smith   shortfunction = (const char**)malloc(PetscLogMalloc*sizeof(char*));if (!shortfunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
70397b9d747SJed Brown   for (i=0,n=0; i<PetscLogMalloc; i++) {
704e5c89e4eSSatish Balay     for (j=0; j<n; j++) {
705e5c89e4eSSatish Balay       ierr = PetscStrcmp(shortfunction[j],PetscLogMallocFunction[i],&match);CHKERRQ(ierr);
706e5c89e4eSSatish Balay       if (match) {
707e5c89e4eSSatish Balay         shortlength[j] += PetscLogMallocLength[i];
70859ffdab8SBarry Smith         shortcount[j]++;
709e5c89e4eSSatish Balay         goto foundit;
710e5c89e4eSSatish Balay       }
711e5c89e4eSSatish Balay     }
712e5c89e4eSSatish Balay     shortfunction[n] = PetscLogMallocFunction[i];
713e5c89e4eSSatish Balay     shortlength[n]   = PetscLogMallocLength[i];
71459ffdab8SBarry Smith     shortcount[n]    = 1;
715e5c89e4eSSatish Balay     n++;
716e5c89e4eSSatish Balay foundit:;
717e5c89e4eSSatish Balay   }
718e5c89e4eSSatish Balay 
719e32f2f54SBarry Smith   perm = (PetscInt*)malloc(n*sizeof(PetscInt));if (!perm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory");
720e5c89e4eSSatish Balay   for (i=0; i<n; i++) perm[i] = i;
721e5c89e4eSSatish Balay   ierr = PetscSortStrWithPermutation(n,(const char**)shortfunction,perm);CHKERRQ(ierr);
722e5c89e4eSSatish Balay 
723e5c89e4eSSatish Balay   ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Memory usage sorted by function\n",rank);CHKERRQ(ierr);
724e5c89e4eSSatish Balay   for (i=0; i<n; i++) {
72559ffdab8SBarry Smith     ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] %d %.0f %s()\n",rank,shortcount[perm[i]],(PetscLogDouble)shortlength[perm[i]],shortfunction[perm[i]]);CHKERRQ(ierr);
726e5c89e4eSSatish Balay   }
727e5c89e4eSSatish Balay   free(perm);
728e5c89e4eSSatish Balay   free(shortlength);
72959ffdab8SBarry Smith   free(shortcount);
730e5c89e4eSSatish Balay   free((char**)shortfunction);
731f56c2debSBarry Smith   err = fflush(fp);
732e32f2f54SBarry Smith   if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file");
733e5c89e4eSSatish Balay   if (rank != size-1) {
734e5c89e4eSSatish Balay     ierr = MPI_Send(&dummy,1,MPIU_INT,rank+1,tag,MPI_COMM_WORLD);CHKERRQ(ierr);
735e5c89e4eSSatish Balay   }
736e5c89e4eSSatish Balay   PetscFunctionReturn(0);
737e5c89e4eSSatish Balay }
738e5c89e4eSSatish Balay 
739e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */
740e5c89e4eSSatish Balay 
741e5c89e4eSSatish Balay #undef __FUNCT__
742e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDebug"
743e5c89e4eSSatish Balay /*@C
744e5c89e4eSSatish Balay     PetscMallocDebug - Turns on/off debugging for the memory management routines.
745e5c89e4eSSatish Balay 
746e5c89e4eSSatish Balay     Not Collective
747e5c89e4eSSatish Balay 
748e5c89e4eSSatish Balay     Input Parameter:
749e5c89e4eSSatish Balay .   level - PETSC_TRUE or PETSC_FALSE
750e5c89e4eSSatish Balay 
751e5c89e4eSSatish Balay    Level: intermediate
752e5c89e4eSSatish Balay 
753e5c89e4eSSatish Balay .seealso: CHKMEMQ(), PetscMallocValidate()
754e5c89e4eSSatish Balay @*/
7557087cfbeSBarry Smith PetscErrorCode  PetscMallocDebug(PetscBool level)
756e5c89e4eSSatish Balay {
757e5c89e4eSSatish Balay   PetscFunctionBegin;
758e5c89e4eSSatish Balay   TRdebugLevel = level;
759e5c89e4eSSatish Balay   PetscFunctionReturn(0);
760e5c89e4eSSatish Balay }
7610acecf5bSBarry Smith 
7620acecf5bSBarry Smith #undef __FUNCT__
7630acecf5bSBarry Smith #define __FUNCT__ "PetscMallocGetDebug"
7640acecf5bSBarry Smith /*@C
7650acecf5bSBarry Smith     PetscMallocGetDebug - Indicates if any PETSc is doing ANY memory debugging.
7660acecf5bSBarry Smith 
7670acecf5bSBarry Smith     Not Collective
7680acecf5bSBarry Smith 
7690acecf5bSBarry Smith     Output Parameter:
7700acecf5bSBarry Smith .    flg - PETSC_TRUE if any debugger
7710acecf5bSBarry Smith 
7720acecf5bSBarry Smith    Level: intermediate
7730acecf5bSBarry Smith 
7740acecf5bSBarry Smith     Note that by default, the debug version always does some debugging unless you run with -malloc no
7750acecf5bSBarry Smith 
7760acecf5bSBarry Smith 
7770acecf5bSBarry Smith .seealso: CHKMEMQ(), PetscMallocValidate()
7780acecf5bSBarry Smith @*/
7790acecf5bSBarry Smith PetscErrorCode  PetscMallocGetDebug(PetscBool *flg)
7800acecf5bSBarry Smith {
7810acecf5bSBarry Smith   PetscFunctionBegin;
7820acecf5bSBarry Smith   if (PetscTrMalloc == PetscTrMallocDefault) *flg = PETSC_TRUE;
7830acecf5bSBarry Smith   else *flg = PETSC_FALSE;
7840acecf5bSBarry Smith   PetscFunctionReturn(0);
7850acecf5bSBarry Smith }
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