17d0a6c19SBarry Smith 2e5c89e4eSSatish Balay /* 3e5c89e4eSSatish Balay Interface to malloc() and free(). This code allows for 4e5c89e4eSSatish Balay logging of memory usage and some error checking 5e5c89e4eSSatish Balay */ 6c6db04a5SJed Brown #include <petscsys.h> /*I "petscsys.h" I*/ 7*665c2dedSJed Brown #include <petscviewer.h> 8e5c89e4eSSatish Balay #if defined(PETSC_HAVE_MALLOC_H) 9e5c89e4eSSatish Balay #include <malloc.h> 10e5c89e4eSSatish Balay #endif 11e5c89e4eSSatish Balay 12e5c89e4eSSatish Balay 13e5c89e4eSSatish Balay /* 14e5c89e4eSSatish Balay These are defined in mal.c and ensure that malloced space is PetscScalar aligned 15e5c89e4eSSatish Balay */ 167087cfbeSBarry Smith extern PetscErrorCode PetscMallocAlign(size_t,int,const char[],const char[],const char[],void**); 177087cfbeSBarry Smith extern PetscErrorCode PetscFreeAlign(void*,int,const char[],const char[],const char[]); 187087cfbeSBarry Smith extern PetscErrorCode PetscTrMallocDefault(size_t,int,const char[],const char[],const char[],void**); 197087cfbeSBarry Smith extern PetscErrorCode PetscTrFreeDefault(void*,int,const char[],const char[],const char[]); 20e5c89e4eSSatish Balay 21e5c89e4eSSatish Balay 220700a824SBarry Smith #define CLASSID_VALUE ((PetscClassId) 0xf0e0d0c9) 230700a824SBarry Smith #define ALREADY_FREED ((PetscClassId) 0x0f0e0d9c) 24e5c89e4eSSatish Balay 25e5c89e4eSSatish Balay typedef struct _trSPACE { 26e5c89e4eSSatish Balay size_t size; 27e5c89e4eSSatish Balay int id; 28e5c89e4eSSatish Balay int lineno; 29e5c89e4eSSatish Balay const char *filename; 30e5c89e4eSSatish Balay const char *functionname; 31e5c89e4eSSatish Balay const char *dirname; 320700a824SBarry Smith PetscClassId classid; 338bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 34e5c89e4eSSatish Balay PetscStack stack; 35e5c89e4eSSatish Balay #endif 36e5c89e4eSSatish Balay struct _trSPACE *next,*prev; 37e5c89e4eSSatish Balay } TRSPACE; 38e5c89e4eSSatish Balay 3925b53cc9SJed Brown /* HEADER_BYTES is the number of bytes in a PetscMalloc() header. 4025b53cc9SJed Brown It is sizeof(TRSPACE) padded to be a multiple of PETSC_MEMALIGN. 4125b53cc9SJed Brown */ 42e5c89e4eSSatish Balay 43a64a8e02SBarry Smith #define HEADER_BYTES ((sizeof(TRSPACE)+(PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1)) 44e5c89e4eSSatish Balay 45e5c89e4eSSatish Balay 4625b53cc9SJed Brown /* This union is used to insure that the block passed to the user retains 4725b53cc9SJed Brown a minimum alignment of PETSC_MEMALIGN. 4825b53cc9SJed Brown */ 49e5c89e4eSSatish Balay typedef union { 50e5c89e4eSSatish Balay TRSPACE sp; 5125b53cc9SJed Brown char v[HEADER_BYTES]; 52e5c89e4eSSatish Balay } TrSPACE; 53e5c89e4eSSatish Balay 54b022a5c1SBarry Smith 55e5c89e4eSSatish Balay static size_t TRallocated = 0; 56e5c89e4eSSatish Balay static int TRfrags = 0; 57e5c89e4eSSatish Balay static TRSPACE *TRhead = 0; 58e5c89e4eSSatish Balay static int TRid = 0; 59ace3abfcSBarry Smith static PetscBool TRdebugLevel = PETSC_FALSE; 60e5c89e4eSSatish Balay static size_t TRMaxMem = 0; 61e5c89e4eSSatish Balay /* 62e5c89e4eSSatish Balay Arrays to log information on all Mallocs 63e5c89e4eSSatish Balay */ 64e5c89e4eSSatish Balay static int PetscLogMallocMax = 10000,PetscLogMalloc = -1; 65574034a9SJed Brown static size_t PetscLogMallocThreshold = 0; 66e5c89e4eSSatish Balay static size_t *PetscLogMallocLength; 67e5c89e4eSSatish Balay static const char **PetscLogMallocDirectory,**PetscLogMallocFile,**PetscLogMallocFunction; 68e5c89e4eSSatish Balay 69e5c89e4eSSatish Balay #undef __FUNCT__ 70b022a5c1SBarry Smith #define __FUNCT__ "PetscSetUseTrMalloc_Private" 71b022a5c1SBarry Smith PetscErrorCode PetscSetUseTrMalloc_Private(void) 72b022a5c1SBarry Smith { 73b022a5c1SBarry Smith PetscErrorCode ierr; 74b022a5c1SBarry Smith 75b022a5c1SBarry Smith PetscFunctionBegin; 76b022a5c1SBarry Smith ierr = PetscMallocSet(PetscTrMallocDefault,PetscTrFreeDefault);CHKERRQ(ierr); 77a297a907SKarl Rupp 78b022a5c1SBarry Smith TRallocated = 0; 79b022a5c1SBarry Smith TRfrags = 0; 80b022a5c1SBarry Smith TRhead = 0; 81b022a5c1SBarry Smith TRid = 0; 82b022a5c1SBarry Smith TRdebugLevel = PETSC_FALSE; 83b022a5c1SBarry Smith TRMaxMem = 0; 84b022a5c1SBarry Smith PetscLogMallocMax = 10000; 85b022a5c1SBarry Smith PetscLogMalloc = -1; 86b022a5c1SBarry Smith PetscFunctionReturn(0); 87b022a5c1SBarry Smith } 88b022a5c1SBarry Smith 89b022a5c1SBarry Smith #undef __FUNCT__ 90e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocValidate" 91e5c89e4eSSatish Balay /*@C 92e5c89e4eSSatish Balay PetscMallocValidate - Test the memory for corruption. This can be used to 93e5c89e4eSSatish Balay check for memory overwrites. 94e5c89e4eSSatish Balay 95e5c89e4eSSatish Balay Input Parameter: 96e5c89e4eSSatish Balay + line - line number where call originated. 97e5c89e4eSSatish Balay . function - name of function calling 98e5c89e4eSSatish Balay . file - file where function is 99e5c89e4eSSatish Balay - dir - directory where function is 100e5c89e4eSSatish Balay 101e5c89e4eSSatish Balay Return value: 102e5c89e4eSSatish Balay The number of errors detected. 103e5c89e4eSSatish Balay 104e5c89e4eSSatish Balay Output Effect: 105e5c89e4eSSatish Balay Error messages are written to stdout. 106e5c89e4eSSatish Balay 107e5c89e4eSSatish Balay Level: advanced 108e5c89e4eSSatish Balay 109e5c89e4eSSatish Balay Notes: 110e5c89e4eSSatish Balay You should generally use CHKMEMQ as a short cut for calling this 111e5c89e4eSSatish Balay routine. 112e5c89e4eSSatish Balay 113e5c89e4eSSatish Balay The line, function, file and dir are given by the C preprocessor as 114e5c89e4eSSatish Balay __LINE__, __FUNCT__, __FILE__, and __DIR__ 115e5c89e4eSSatish Balay 116e5c89e4eSSatish Balay The Fortran calling sequence is simply PetscMallocValidate(ierr) 117e5c89e4eSSatish Balay 118e5c89e4eSSatish Balay No output is generated if there are no problems detected. 119e5c89e4eSSatish Balay 120e5c89e4eSSatish Balay .seealso: CHKMEMQ 121e5c89e4eSSatish Balay 122e5c89e4eSSatish Balay @*/ 1237087cfbeSBarry Smith PetscErrorCode PetscMallocValidate(int line,const char function[],const char file[],const char dir[]) 124e5c89e4eSSatish Balay { 1256c093d5bSvictor TRSPACE *head,*lasthead; 126e5c89e4eSSatish Balay char *a; 1270700a824SBarry Smith PetscClassId *nend; 128e5c89e4eSSatish Balay 129e5c89e4eSSatish Balay PetscFunctionBegin; 1306c093d5bSvictor head = TRhead; lasthead = NULL; 131e5c89e4eSSatish Balay while (head) { 1320700a824SBarry Smith if (head->classid != CLASSID_VALUE) { 133e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s%s\n",function,line,dir,file); 134e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory at address %p is corrupted\n",head); 135e5c89e4eSSatish Balay (*PetscErrorPrintf)("Probably write past beginning or end of array\n"); 136a297a907SKarl Rupp if (lasthead) (*PetscErrorPrintf)("Last intact block allocated in %s() line %d in %s%s\n",lasthead->functionname,lasthead->lineno,lasthead->dirname,lasthead->filename); 137e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 138e5c89e4eSSatish Balay } 139e5c89e4eSSatish Balay a = (char*)(((TrSPACE*)head) + 1); 1400700a824SBarry Smith nend = (PetscClassId*)(a + head->size); 1410700a824SBarry Smith if (*nend != CLASSID_VALUE) { 142e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscMallocValidate: error detected at %s() line %d in %s%s\n",function,line,dir,file); 143e5c89e4eSSatish Balay if (*nend == ALREADY_FREED) { 144e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p already freed\n",head->id,(PetscLogDouble)head->size,a); 145e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 146e5c89e4eSSatish Balay } else { 147e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a); 148e5c89e4eSSatish Balay (*PetscErrorPrintf)("Memory originally allocated in %s() line %d in %s%s\n",head->functionname,head->lineno,head->dirname,head->filename); 149e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC," "); 150e5c89e4eSSatish Balay } 151e5c89e4eSSatish Balay } 1526c093d5bSvictor lasthead = head; 153e5c89e4eSSatish Balay head = head->next; 154e5c89e4eSSatish Balay } 155e5c89e4eSSatish Balay PetscFunctionReturn(0); 156e5c89e4eSSatish Balay } 157e5c89e4eSSatish Balay 158e5c89e4eSSatish Balay #undef __FUNCT__ 159e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrMallocDefault" 160e5c89e4eSSatish Balay /* 161e5c89e4eSSatish Balay PetscTrMallocDefault - Malloc with tracing. 162e5c89e4eSSatish Balay 163e5c89e4eSSatish Balay Input Parameters: 164e5c89e4eSSatish Balay + a - number of bytes to allocate 165e5c89e4eSSatish Balay . lineno - line number where used. Use __LINE__ for this 166e5c89e4eSSatish Balay . function - function calling routine. Use __FUNCT__ for this 167e5c89e4eSSatish Balay . filename - file name where used. Use __FILE__ for this 168e5c89e4eSSatish Balay - dir - directory where file is. Use __SDIR__ for this 169e5c89e4eSSatish Balay 170e5c89e4eSSatish Balay Returns: 171e5c89e4eSSatish Balay double aligned pointer to requested storage, or null if not 172e5c89e4eSSatish Balay available. 173e5c89e4eSSatish Balay */ 1747087cfbeSBarry Smith PetscErrorCode PetscTrMallocDefault(size_t a,int lineno,const char function[],const char filename[],const char dir[],void **result) 175e5c89e4eSSatish Balay { 176e5c89e4eSSatish Balay TRSPACE *head; 177e5c89e4eSSatish Balay char *inew; 178e5c89e4eSSatish Balay size_t nsize; 179e5c89e4eSSatish Balay PetscErrorCode ierr; 180e5c89e4eSSatish Balay 181e5c89e4eSSatish Balay PetscFunctionBegin; 18217186662SBarry Smith if (!a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Trying to malloc zero size array"); 1832a6744ebSBarry Smith 184e5c89e4eSSatish Balay if (TRdebugLevel) { 185e5c89e4eSSatish Balay ierr = PetscMallocValidate(lineno,function,filename,dir); if (ierr) PetscFunctionReturn(ierr); 186e5c89e4eSSatish Balay } 187e5c89e4eSSatish Balay 18825b53cc9SJed Brown nsize = (a + (PETSC_MEMALIGN-1)) & ~(PETSC_MEMALIGN-1); 1890700a824SBarry Smith ierr = PetscMallocAlign(nsize+sizeof(TrSPACE)+sizeof(PetscClassId),lineno,function,filename,dir,(void**)&inew);CHKERRQ(ierr); 190e5c89e4eSSatish Balay 191e5c89e4eSSatish Balay head = (TRSPACE*)inew; 192e5c89e4eSSatish Balay inew += sizeof(TrSPACE); 193e5c89e4eSSatish Balay 194e5c89e4eSSatish Balay if (TRhead) TRhead->prev = head; 195e5c89e4eSSatish Balay head->next = TRhead; 196e5c89e4eSSatish Balay TRhead = head; 197e5c89e4eSSatish Balay head->prev = 0; 198e5c89e4eSSatish Balay head->size = nsize; 199e5c89e4eSSatish Balay head->id = TRid; 200e5c89e4eSSatish Balay head->lineno = lineno; 201e5c89e4eSSatish Balay 202e5c89e4eSSatish Balay head->filename = filename; 203e5c89e4eSSatish Balay head->functionname = function; 204e5c89e4eSSatish Balay head->dirname = dir; 2050700a824SBarry Smith head->classid = CLASSID_VALUE; 2060700a824SBarry Smith *(PetscClassId*)(inew + nsize) = CLASSID_VALUE; 207e5c89e4eSSatish Balay 208e5c89e4eSSatish Balay TRallocated += nsize; 209a297a907SKarl Rupp if (TRallocated > TRMaxMem) TRMaxMem = TRallocated; 210e5c89e4eSSatish Balay TRfrags++; 211e5c89e4eSSatish Balay 2128bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 2131f46d60fSShri Abhyankar ierr = PetscStackCopy((PetscStack*)PetscThreadLocalGetValue(petscstack),&head->stack);CHKERRQ(ierr); 2142c9581d2SBarry Smith /* fix the line number to where the malloc() was called, not the PetscFunctionBegin; */ 2152c9581d2SBarry Smith head->stack.line[head->stack.currentsize-2] = lineno; 216e5c89e4eSSatish Balay #endif 217e5c89e4eSSatish Balay 218e5c89e4eSSatish Balay /* 219e5c89e4eSSatish Balay Allow logging of all mallocs made 220e5c89e4eSSatish Balay */ 221574034a9SJed Brown if (PetscLogMalloc > -1 && PetscLogMalloc < PetscLogMallocMax && a >= PetscLogMallocThreshold) { 222e5c89e4eSSatish Balay if (!PetscLogMalloc) { 223e5c89e4eSSatish Balay PetscLogMallocLength = (size_t*)malloc(PetscLogMallocMax*sizeof(size_t)); 224e32f2f54SBarry Smith if (!PetscLogMallocLength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 225a297a907SKarl Rupp 226a2ea699eSBarry Smith PetscLogMallocDirectory = (const char**)malloc(PetscLogMallocMax*sizeof(char*)); 227e32f2f54SBarry Smith if (!PetscLogMallocDirectory) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 228a297a907SKarl Rupp 229a2ea699eSBarry Smith PetscLogMallocFile = (const char**)malloc(PetscLogMallocMax*sizeof(char*)); 230e32f2f54SBarry Smith if (!PetscLogMallocFile) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 231a297a907SKarl Rupp 232a2ea699eSBarry Smith PetscLogMallocFunction = (const char**)malloc(PetscLogMallocMax*sizeof(char*)); 233e32f2f54SBarry Smith if (!PetscLogMallocFunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM," "); 234e5c89e4eSSatish Balay } 235e5c89e4eSSatish Balay PetscLogMallocLength[PetscLogMalloc] = nsize; 236e5c89e4eSSatish Balay PetscLogMallocDirectory[PetscLogMalloc] = dir; 237e5c89e4eSSatish Balay PetscLogMallocFile[PetscLogMalloc] = filename; 238e5c89e4eSSatish Balay PetscLogMallocFunction[PetscLogMalloc++] = function; 239e5c89e4eSSatish Balay } 240e5c89e4eSSatish Balay *result = (void*)inew; 241e5c89e4eSSatish Balay PetscFunctionReturn(0); 242e5c89e4eSSatish Balay } 243e5c89e4eSSatish Balay 244e5c89e4eSSatish Balay 245e5c89e4eSSatish Balay #undef __FUNCT__ 246e5c89e4eSSatish Balay #define __FUNCT__ "PetscTrFreeDefault" 247e5c89e4eSSatish Balay /* 248e5c89e4eSSatish Balay PetscTrFreeDefault - Free with tracing. 249e5c89e4eSSatish Balay 250e5c89e4eSSatish Balay Input Parameters: 251e5c89e4eSSatish Balay . a - pointer to a block allocated with PetscTrMalloc 252e5c89e4eSSatish Balay . lineno - line number where used. Use __LINE__ for this 253e5c89e4eSSatish Balay . function - function calling routine. Use __FUNCT__ for this 254e5c89e4eSSatish Balay . file - file name where used. Use __FILE__ for this 255e5c89e4eSSatish Balay . dir - directory where file is. Use __SDIR__ for this 256e5c89e4eSSatish Balay */ 2577087cfbeSBarry Smith PetscErrorCode PetscTrFreeDefault(void *aa,int line,const char function[],const char file[],const char dir[]) 258e5c89e4eSSatish Balay { 259e5c89e4eSSatish Balay char *a = (char*)aa; 260e5c89e4eSSatish Balay TRSPACE *head; 261e5c89e4eSSatish Balay char *ahead; 262e5c89e4eSSatish Balay PetscErrorCode ierr; 2630700a824SBarry Smith PetscClassId *nend; 264e5c89e4eSSatish Balay 265e5c89e4eSSatish Balay PetscFunctionBegin; 266e5c89e4eSSatish Balay /* Do not try to handle empty blocks */ 267e5c89e4eSSatish Balay if (!a) { 268e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault called from %s() line %d in %s%s\n",function,line,dir,file); 269e32f2f54SBarry Smith SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Trying to free null block: Free called from %s() line %d in %s%s\n",function,line,dir,file); 270e5c89e4eSSatish Balay } 271e5c89e4eSSatish Balay 272e5c89e4eSSatish Balay if (TRdebugLevel) { 273e5c89e4eSSatish Balay ierr = PetscMallocValidate(line,function,file,dir);CHKERRQ(ierr); 274e5c89e4eSSatish Balay } 275e5c89e4eSSatish Balay 276e5c89e4eSSatish Balay ahead = a; 277e5c89e4eSSatish Balay a = a - sizeof(TrSPACE); 278e5c89e4eSSatish Balay head = (TRSPACE*)a; 279e5c89e4eSSatish Balay 2800700a824SBarry Smith if (head->classid != CLASSID_VALUE) { 281e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s%s\n",function,line,dir,file); 282e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block at address %p is corrupted; cannot free;\nmay be block not allocated with PetscMalloc()\n",a); 283e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Bad location or corrupted memory"); 284e5c89e4eSSatish Balay } 2850700a824SBarry Smith nend = (PetscClassId*)(ahead + head->size); 2860700a824SBarry Smith if (*nend != CLASSID_VALUE) { 287e5c89e4eSSatish Balay if (*nend == ALREADY_FREED) { 288e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s%s\n",function,line,dir,file); 289e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p was already freed\n",head->id,(PetscLogDouble)head->size,a + sizeof(TrSPACE)); 290e5c89e4eSSatish Balay if (head->lineno > 0 && head->lineno < 50000 /* sanity check */) { 291e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block freed in %s() line %d in %s%s\n",head->functionname,head->lineno,head->dirname,head->filename); 292e5c89e4eSSatish Balay } else { 293e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block allocated in %s() line %d in %s%s\n",head->functionname,-head->lineno,head->dirname,head->filename); 294e5c89e4eSSatish Balay } 295e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Memory already freed"); 296e5c89e4eSSatish Balay } else { 297e5c89e4eSSatish Balay /* Damaged tail */ 298e5c89e4eSSatish Balay (*PetscErrorPrintf)("PetscTrFreeDefault() called from %s() line %d in %s%s\n",function,line,dir,file); 299e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block [id=%d(%.0f)] at address %p is corrupted (probably write past end of array)\n",head->id,(PetscLogDouble)head->size,a); 300e5c89e4eSSatish Balay (*PetscErrorPrintf)("Block allocated in %s() line %d in %s%s\n",head->functionname,head->lineno,head->dirname,head->filename); 301e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEMC,"Corrupted memory"); 302e5c89e4eSSatish Balay } 303e5c89e4eSSatish Balay } 304e5c89e4eSSatish Balay /* Mark the location freed */ 305e5c89e4eSSatish Balay *nend = ALREADY_FREED; 306e5c89e4eSSatish Balay /* Save location where freed. If we suspect the line number, mark as allocated location */ 307e5c89e4eSSatish Balay if (line > 0 && line < 50000) { 308e5c89e4eSSatish Balay head->lineno = line; 309e5c89e4eSSatish Balay head->filename = file; 310e5c89e4eSSatish Balay head->functionname = function; 311e5c89e4eSSatish Balay head->dirname = dir; 312e5c89e4eSSatish Balay } else { 313e5c89e4eSSatish Balay head->lineno = -head->lineno; 314e5c89e4eSSatish Balay } 315e5c89e4eSSatish Balay /* zero out memory - helps to find some reuse of already freed memory */ 316e5c89e4eSSatish Balay ierr = PetscMemzero(aa,head->size);CHKERRQ(ierr); 317e5c89e4eSSatish Balay 318e5c89e4eSSatish Balay TRallocated -= head->size; 319e5c89e4eSSatish Balay TRfrags--; 320e5c89e4eSSatish Balay if (head->prev) head->prev->next = head->next; 321e5c89e4eSSatish Balay else TRhead = head->next; 322e5c89e4eSSatish Balay 323e5c89e4eSSatish Balay if (head->next) head->next->prev = head->prev; 324e5c89e4eSSatish Balay ierr = PetscFreeAlign(a,line,function,file,dir);CHKERRQ(ierr); 325e5c89e4eSSatish Balay PetscFunctionReturn(0); 326e5c89e4eSSatish Balay } 327e5c89e4eSSatish Balay 328e5c89e4eSSatish Balay 329e5c89e4eSSatish Balay #undef __FUNCT__ 330e5c89e4eSSatish Balay #define __FUNCT__ "PetscMemoryShowUsage" 331fe7fb379SMatthew Knepley /*@C 332e5c89e4eSSatish Balay PetscMemoryShowUsage - Shows the amount of memory currently being used 333e5c89e4eSSatish Balay in a communicator. 334e5c89e4eSSatish Balay 335e5c89e4eSSatish Balay Collective on PetscViewer 336e5c89e4eSSatish Balay 337e5c89e4eSSatish Balay Input Parameter: 338e5c89e4eSSatish Balay + viewer - the viewer that defines the communicator 339e5c89e4eSSatish Balay - message - string printed before values 340e5c89e4eSSatish Balay 341e5c89e4eSSatish Balay Level: intermediate 342e5c89e4eSSatish Balay 343e5c89e4eSSatish Balay Concepts: memory usage 344e5c89e4eSSatish Balay 3451bb97394SVictor Eijkhout .seealso: PetscMallocDump(), PetscMemoryGetCurrentUsage() 346e5c89e4eSSatish Balay @*/ 3477087cfbeSBarry Smith PetscErrorCode PetscMemoryShowUsage(PetscViewer viewer,const char message[]) 348e5c89e4eSSatish Balay { 349e5c89e4eSSatish Balay PetscLogDouble allocated,maximum,resident,residentmax; 350e5c89e4eSSatish Balay PetscErrorCode ierr; 351e5c89e4eSSatish Balay PetscMPIInt rank; 352e5c89e4eSSatish Balay MPI_Comm comm; 353e5c89e4eSSatish Balay 354e5c89e4eSSatish Balay PetscFunctionBegin; 355e5c89e4eSSatish Balay if (!viewer) viewer = PETSC_VIEWER_STDOUT_WORLD; 356e5c89e4eSSatish Balay ierr = PetscMallocGetCurrentUsage(&allocated);CHKERRQ(ierr); 357e5c89e4eSSatish Balay ierr = PetscMallocGetMaximumUsage(&maximum);CHKERRQ(ierr); 358e5c89e4eSSatish Balay ierr = PetscMemoryGetCurrentUsage(&resident);CHKERRQ(ierr); 359e5c89e4eSSatish Balay ierr = PetscMemoryGetMaximumUsage(&residentmax);CHKERRQ(ierr); 360e5c89e4eSSatish Balay if (residentmax > 0) residentmax = PetscMax(resident,residentmax); 361e5c89e4eSSatish Balay ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr); 362e5c89e4eSSatish Balay ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 363e5c89e4eSSatish Balay ierr = PetscViewerASCIIPrintf(viewer,message);CHKERRQ(ierr); 3647b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 365e5c89e4eSSatish Balay if (resident && residentmax && allocated) { 366e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g max process memory %g\n",rank,allocated,maximum,rank,resident,residentmax);CHKERRQ(ierr); 367e5c89e4eSSatish Balay } else if (resident && residentmax) { 368e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Run with -malloc to get statistics on PetscMalloc() calls\n[%d]Current process memory %g max process memory %g\n",rank,rank,resident,residentmax);CHKERRQ(ierr); 369e5c89e4eSSatish Balay } else if (resident && allocated) { 370e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]Current process memory %g, run with -memory_info to get max memory usage\n",rank,allocated,maximum,rank,resident);CHKERRQ(ierr); 371e5c89e4eSSatish Balay } else if (allocated) { 372e5c89e4eSSatish Balay ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d]Current space PetscMalloc()ed %g, max space PetscMalloced() %g\n[%d]OS cannot compute process memory\n",rank,allocated,maximum,rank);CHKERRQ(ierr); 373e5c89e4eSSatish Balay } else { 374e5c89e4eSSatish Balay ierr = PetscViewerASCIIPrintf(viewer,"Run with -malloc to get statistics on PetscMalloc() calls\nOS cannot compute process memory\n");CHKERRQ(ierr); 375e5c89e4eSSatish Balay } 376e5c89e4eSSatish Balay ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 3777b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 378e5c89e4eSSatish Balay PetscFunctionReturn(0); 379e5c89e4eSSatish Balay } 380e5c89e4eSSatish Balay 381e5c89e4eSSatish Balay #undef __FUNCT__ 382e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetCurrentUsage" 383e5c89e4eSSatish Balay /*@C 384e5c89e4eSSatish Balay PetscMallocGetCurrentUsage - gets the current amount of memory used that was PetscMalloc()ed 385e5c89e4eSSatish Balay 386e5c89e4eSSatish Balay Not Collective 387e5c89e4eSSatish Balay 388e5c89e4eSSatish Balay Output Parameters: 389e5c89e4eSSatish Balay . space - number of bytes currently allocated 390e5c89e4eSSatish Balay 391e5c89e4eSSatish Balay Level: intermediate 392e5c89e4eSSatish Balay 393e5c89e4eSSatish Balay Concepts: memory usage 394e5c89e4eSSatish Balay 395e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(), 396e5c89e4eSSatish Balay PetscMemoryGetMaximumUsage() 397e5c89e4eSSatish Balay @*/ 3987087cfbeSBarry Smith PetscErrorCode PetscMallocGetCurrentUsage(PetscLogDouble *space) 399e5c89e4eSSatish Balay { 400e5c89e4eSSatish Balay PetscFunctionBegin; 401e5c89e4eSSatish Balay *space = (PetscLogDouble) TRallocated; 402e5c89e4eSSatish Balay PetscFunctionReturn(0); 403e5c89e4eSSatish Balay } 404e5c89e4eSSatish Balay 405e5c89e4eSSatish Balay #undef __FUNCT__ 406e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocGetMaximumUsage" 407e5c89e4eSSatish Balay /*@C 408e5c89e4eSSatish Balay PetscMallocGetMaximumUsage - gets the maximum amount of memory used that was PetscMalloc()ed at any time 409e5c89e4eSSatish Balay during this run. 410e5c89e4eSSatish Balay 411e5c89e4eSSatish Balay Not Collective 412e5c89e4eSSatish Balay 413e5c89e4eSSatish Balay Output Parameters: 414e5c89e4eSSatish Balay . space - maximum number of bytes ever allocated at one time 415e5c89e4eSSatish Balay 416e5c89e4eSSatish Balay Level: intermediate 417e5c89e4eSSatish Balay 418e5c89e4eSSatish Balay Concepts: memory usage 419e5c89e4eSSatish Balay 420e5c89e4eSSatish Balay .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocGetMaximumUsage(), PetscMemoryGetCurrentUsage(), 421e5c89e4eSSatish Balay PetscMemoryGetCurrentUsage() 422e5c89e4eSSatish Balay @*/ 4237087cfbeSBarry Smith PetscErrorCode PetscMallocGetMaximumUsage(PetscLogDouble *space) 424e5c89e4eSSatish Balay { 425e5c89e4eSSatish Balay PetscFunctionBegin; 426e5c89e4eSSatish Balay *space = (PetscLogDouble) TRMaxMem; 427e5c89e4eSSatish Balay PetscFunctionReturn(0); 428e5c89e4eSSatish Balay } 429e5c89e4eSSatish Balay 430a64a8e02SBarry Smith #if defined(PETSC_USE_DEBUG) 431a64a8e02SBarry Smith #undef __FUNCT__ 432a64a8e02SBarry Smith #define __FUNCT__ "PetscMallocGetStack" 433a64a8e02SBarry Smith /*@C 434a64a8e02SBarry Smith PetscMallocGetStack - returns a pointer to the stack for the location in the program a call to PetscMalloc() was used to obtain that memory 435a64a8e02SBarry Smith 436a64a8e02SBarry Smith Collective on PETSC_COMM_WORLD 437a64a8e02SBarry Smith 438a64a8e02SBarry Smith Input Parameter: 439a64a8e02SBarry Smith . ptr - the memory location 440a64a8e02SBarry Smith 441a64a8e02SBarry Smith Output Paramter: 442a64a8e02SBarry Smith . stack - the stack indicating where the program allocated this memory 443a64a8e02SBarry Smith 444a64a8e02SBarry Smith Level: intermediate 445a64a8e02SBarry Smith 446a64a8e02SBarry Smith .seealso: PetscMallocGetCurrentUsage(), PetscMallocDumpLog() 447a64a8e02SBarry Smith @*/ 448a64a8e02SBarry Smith PetscErrorCode PetscMallocGetStack(void *ptr,PetscStack **stack) 449a64a8e02SBarry Smith { 450a64a8e02SBarry Smith TRSPACE *head; 451a64a8e02SBarry Smith 452a64a8e02SBarry Smith PetscFunctionBegin; 453a64a8e02SBarry Smith head = (TRSPACE*) (((char*)ptr) - HEADER_BYTES); 454a64a8e02SBarry Smith *stack = &head->stack; 455a64a8e02SBarry Smith PetscFunctionReturn(0); 456a64a8e02SBarry Smith } 457a64a8e02SBarry Smith #endif 458a64a8e02SBarry Smith 459e5c89e4eSSatish Balay #undef __FUNCT__ 460e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDump" 461e5c89e4eSSatish Balay /*@C 462e5c89e4eSSatish Balay PetscMallocDump - Dumps the allocated memory blocks to a file. The information 463e5c89e4eSSatish Balay printed is: size of space (in bytes), address of space, id of space, 464e5c89e4eSSatish Balay file in which space was allocated, and line number at which it was 465e5c89e4eSSatish Balay allocated. 466e5c89e4eSSatish Balay 467e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 468e5c89e4eSSatish Balay 469e5c89e4eSSatish Balay Input Parameter: 470e5c89e4eSSatish Balay . fp - file pointer. If fp is NULL, stdout is assumed. 471e5c89e4eSSatish Balay 472e5c89e4eSSatish Balay Options Database Key: 473e5c89e4eSSatish Balay . -malloc_dump - Dumps unfreed memory during call to PetscFinalize() 474e5c89e4eSSatish Balay 475e5c89e4eSSatish Balay Level: intermediate 476e5c89e4eSSatish Balay 477e5c89e4eSSatish Balay Fortran Note: 478e5c89e4eSSatish Balay The calling sequence in Fortran is PetscMallocDump(integer ierr) 479e5c89e4eSSatish Balay The fp defaults to stdout. 480e5c89e4eSSatish Balay 481e5c89e4eSSatish Balay Notes: uses MPI_COMM_WORLD, because this may be called in PetscFinalize() after PETSC_COMM_WORLD 482e5c89e4eSSatish Balay has been freed. 483e5c89e4eSSatish Balay 484e5c89e4eSSatish Balay Concepts: memory usage 485e5c89e4eSSatish Balay Concepts: memory bleeding 486e5c89e4eSSatish Balay Concepts: bleeding memory 487e5c89e4eSSatish Balay 4889e9a1f8fSvictor .seealso: PetscMallocGetCurrentUsage(), PetscMallocDumpLog() 489e5c89e4eSSatish Balay @*/ 4907087cfbeSBarry Smith PetscErrorCode PetscMallocDump(FILE *fp) 491e5c89e4eSSatish Balay { 492e5c89e4eSSatish Balay TRSPACE *head; 493e5c89e4eSSatish Balay PetscErrorCode ierr; 494e5c89e4eSSatish Balay PetscMPIInt rank; 495e5c89e4eSSatish Balay 496e5c89e4eSSatish Balay PetscFunctionBegin; 497e5c89e4eSSatish Balay ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr); 498da9f1d6bSBarry Smith if (!fp) fp = PETSC_STDOUT; 499a297a907SKarl Rupp if (TRallocated > 0) fprintf(fp,"[%d]Total space allocated %.0f bytes\n",rank,(PetscLogDouble)TRallocated); 500e5c89e4eSSatish Balay head = TRhead; 501e5c89e4eSSatish Balay while (head) { 502e5c89e4eSSatish Balay fprintf(fp,"[%2d]%.0f bytes %s() line %d in %s%s\n",rank,(PetscLogDouble)head->size,head->functionname,head->lineno,head->dirname,head->filename); 5038bf1f09cSShri Abhyankar #if defined(PETSC_USE_DEBUG) 504e5c89e4eSSatish Balay ierr = PetscStackPrint(&head->stack,fp);CHKERRQ(ierr); 505e5c89e4eSSatish Balay #endif 506e5c89e4eSSatish Balay head = head->next; 507e5c89e4eSSatish Balay } 508e5c89e4eSSatish Balay PetscFunctionReturn(0); 509e5c89e4eSSatish Balay } 510e5c89e4eSSatish Balay 511e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */ 512e5c89e4eSSatish Balay 513e5c89e4eSSatish Balay #undef __FUNCT__ 514e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocSetDumpLog" 515e5c89e4eSSatish Balay /*@C 516e5c89e4eSSatish Balay PetscMallocSetDumpLog - Activates logging of all calls to PetscMalloc(). 517e5c89e4eSSatish Balay 518e5c89e4eSSatish Balay Not Collective 519e5c89e4eSSatish Balay 520e5c89e4eSSatish Balay Options Database Key: 521574034a9SJed Brown + -malloc_log <filename> - Activates PetscMallocDumpLog() 522574034a9SJed Brown - -malloc_log_threshold <min> - Activates logging and sets a minimum size 523e5c89e4eSSatish Balay 524e5c89e4eSSatish Balay Level: advanced 525e5c89e4eSSatish Balay 526574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLogThreshold() 527e5c89e4eSSatish Balay @*/ 5287087cfbeSBarry Smith PetscErrorCode PetscMallocSetDumpLog(void) 529e5c89e4eSSatish Balay { 53021b680ceSJed Brown PetscErrorCode ierr; 53121b680ceSJed Brown 532e5c89e4eSSatish Balay PetscFunctionBegin; 533e5c89e4eSSatish Balay PetscLogMalloc = 0; 534a297a907SKarl Rupp 53521b680ceSJed Brown ierr = PetscMemorySetGetMaximumUsage();CHKERRQ(ierr); 536e5c89e4eSSatish Balay PetscFunctionReturn(0); 537e5c89e4eSSatish Balay } 538e5c89e4eSSatish Balay 539e5c89e4eSSatish Balay #undef __FUNCT__ 540574034a9SJed Brown #define __FUNCT__ "PetscMallocSetDumpLogThreshold" 541574034a9SJed Brown /*@C 542574034a9SJed Brown PetscMallocSetDumpLogThreshold - Activates logging of all calls to PetscMalloc(). 543574034a9SJed Brown 544574034a9SJed Brown Not Collective 545574034a9SJed Brown 546574034a9SJed Brown Input Arguments: 547574034a9SJed Brown . logmin - minimum allocation size to log, or PETSC_DEFAULT 548574034a9SJed Brown 549574034a9SJed Brown Options Database Key: 550574034a9SJed Brown + -malloc_log <filename> - Activates PetscMallocDumpLog() 551574034a9SJed Brown - -malloc_log_threshold <min> - Activates logging and sets a minimum size 552574034a9SJed Brown 553574034a9SJed Brown Level: advanced 554574034a9SJed Brown 555574034a9SJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog(), PetscMallocSetDumpLog() 556574034a9SJed Brown @*/ 557574034a9SJed Brown PetscErrorCode PetscMallocSetDumpLogThreshold(PetscLogDouble logmin) 558574034a9SJed Brown { 559574034a9SJed Brown PetscErrorCode ierr; 560574034a9SJed Brown 561574034a9SJed Brown PetscFunctionBegin; 562574034a9SJed Brown ierr = PetscMallocSetDumpLog();CHKERRQ(ierr); 563574034a9SJed Brown if (logmin < 0) logmin = 0.0; /* PETSC_DEFAULT or PETSC_DECIDE */ 564574034a9SJed Brown PetscLogMallocThreshold = (size_t)logmin; 565574034a9SJed Brown PetscFunctionReturn(0); 566574034a9SJed Brown } 567574034a9SJed Brown 568574034a9SJed Brown #undef __FUNCT__ 56918a2528dSJed Brown #define __FUNCT__ "PetscMallocGetDumpLog" 57018a2528dSJed Brown /*@C 57118a2528dSJed Brown PetscMallocGetDumpLog - Determine whether all calls to PetscMalloc() are being logged 57218a2528dSJed Brown 57318a2528dSJed Brown Not Collective 57418a2528dSJed Brown 57518a2528dSJed Brown Output Arguments 57618a2528dSJed Brown . logging - PETSC_TRUE if logging is active 57718a2528dSJed Brown 57818a2528dSJed Brown Options Database Key: 57918a2528dSJed Brown . -malloc_log - Activates PetscMallocDumpLog() 58018a2528dSJed Brown 58118a2528dSJed Brown Level: advanced 58218a2528dSJed Brown 58318a2528dSJed Brown .seealso: PetscMallocDump(), PetscMallocDumpLog() 58418a2528dSJed Brown @*/ 58518a2528dSJed Brown PetscErrorCode PetscMallocGetDumpLog(PetscBool *logging) 58618a2528dSJed Brown { 58718a2528dSJed Brown 58818a2528dSJed Brown PetscFunctionBegin; 58918a2528dSJed Brown *logging = (PetscBool)(PetscLogMalloc >= 0); 59018a2528dSJed Brown PetscFunctionReturn(0); 59118a2528dSJed Brown } 59218a2528dSJed Brown 59318a2528dSJed Brown #undef __FUNCT__ 594e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDumpLog" 595e5c89e4eSSatish Balay /*@C 596e5c89e4eSSatish Balay PetscMallocDumpLog - Dumps the log of all calls to PetscMalloc(); also calls 59721b680ceSJed Brown PetscMemoryGetMaximumUsage() 598e5c89e4eSSatish Balay 599e5c89e4eSSatish Balay Collective on PETSC_COMM_WORLD 600e5c89e4eSSatish Balay 601e5c89e4eSSatish Balay Input Parameter: 6020298fd71SBarry Smith . fp - file pointer; or NULL 603e5c89e4eSSatish Balay 604e5c89e4eSSatish Balay Options Database Key: 605e5c89e4eSSatish Balay . -malloc_log - Activates PetscMallocDumpLog() 606e5c89e4eSSatish Balay 607e5c89e4eSSatish Balay Level: advanced 608e5c89e4eSSatish Balay 609e5c89e4eSSatish Balay Fortran Note: 610e5c89e4eSSatish Balay The calling sequence in Fortran is PetscMallocDumpLog(integer ierr) 611e5c89e4eSSatish Balay The fp defaults to stdout. 612e5c89e4eSSatish Balay 613e5c89e4eSSatish Balay .seealso: PetscMallocGetCurrentUsage(), PetscMallocDump(), PetscMallocSetDumpLog() 614e5c89e4eSSatish Balay @*/ 6157087cfbeSBarry Smith PetscErrorCode PetscMallocDumpLog(FILE *fp) 616e5c89e4eSSatish Balay { 617e5c89e4eSSatish Balay PetscInt i,j,n,dummy,*perm; 618e5c89e4eSSatish Balay size_t *shortlength; 619f56c2debSBarry Smith int *shortcount,err; 620e5c89e4eSSatish Balay PetscMPIInt rank,size,tag = 1212 /* very bad programming */; 621ace3abfcSBarry Smith PetscBool match; 622e5c89e4eSSatish Balay const char **shortfunction; 623e5c89e4eSSatish Balay PetscLogDouble rss; 624e5c89e4eSSatish Balay MPI_Status status; 625e5c89e4eSSatish Balay PetscErrorCode ierr; 626e5c89e4eSSatish Balay 627e5c89e4eSSatish Balay PetscFunctionBegin; 628e5c89e4eSSatish Balay ierr = MPI_Comm_rank(MPI_COMM_WORLD,&rank);CHKERRQ(ierr); 629e5c89e4eSSatish Balay ierr = MPI_Comm_size(MPI_COMM_WORLD,&size);CHKERRQ(ierr); 630e5c89e4eSSatish Balay /* 631e5c89e4eSSatish Balay Try to get the data printed in order by processor. This will only sometimes work 632e5c89e4eSSatish Balay */ 633f56c2debSBarry Smith err = fflush(fp); 634e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 635f56c2debSBarry Smith 636e5c89e4eSSatish Balay ierr = MPI_Barrier(MPI_COMM_WORLD);CHKERRQ(ierr); 637e5c89e4eSSatish Balay if (rank) { 638e5c89e4eSSatish Balay ierr = MPI_Recv(&dummy,1,MPIU_INT,rank-1,tag,MPI_COMM_WORLD,&status);CHKERRQ(ierr); 639e5c89e4eSSatish Balay } 640e5c89e4eSSatish Balay 641768aa557SSatish Balay if (PetscLogMalloc < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"PetscMallocDumpLog() called without call to PetscMallocSetDumpLog() this is often due to\n setting the option -malloc_log AFTER PetscInitialize() with PetscOptionsInsert() or PetscOptionsInsertFile()"); 642768aa557SSatish Balay 643da9f1d6bSBarry Smith if (!fp) fp = PETSC_STDOUT; 644f3d65365SJed Brown ierr = PetscMemoryGetMaximumUsage(&rss);CHKERRQ(ierr); 645e5c89e4eSSatish Balay if (rss) { 646f3d65365SJed Brown ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f maximum size of entire process %.0f\n",rank,(PetscLogDouble)TRMaxMem,rss);CHKERRQ(ierr); 647e5c89e4eSSatish Balay } else { 648e5c89e4eSSatish Balay ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Maximum memory PetscMalloc()ed %.0f OS cannot compute size of entire process\n",rank,(PetscLogDouble)TRMaxMem);CHKERRQ(ierr); 649e5c89e4eSSatish Balay } 650e32f2f54SBarry Smith shortcount = (int*)malloc(PetscLogMalloc*sizeof(int));if (!shortcount) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 651e32f2f54SBarry Smith shortlength = (size_t*)malloc(PetscLogMalloc*sizeof(size_t));if (!shortlength) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 652e32f2f54SBarry Smith shortfunction = (const char**)malloc(PetscLogMalloc*sizeof(char*));if (!shortfunction) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 65397b9d747SJed Brown for (i=0,n=0; i<PetscLogMalloc; i++) { 654e5c89e4eSSatish Balay for (j=0; j<n; j++) { 655e5c89e4eSSatish Balay ierr = PetscStrcmp(shortfunction[j],PetscLogMallocFunction[i],&match);CHKERRQ(ierr); 656e5c89e4eSSatish Balay if (match) { 657e5c89e4eSSatish Balay shortlength[j] += PetscLogMallocLength[i]; 65859ffdab8SBarry Smith shortcount[j]++; 659e5c89e4eSSatish Balay goto foundit; 660e5c89e4eSSatish Balay } 661e5c89e4eSSatish Balay } 662e5c89e4eSSatish Balay shortfunction[n] = PetscLogMallocFunction[i]; 663e5c89e4eSSatish Balay shortlength[n] = PetscLogMallocLength[i]; 66459ffdab8SBarry Smith shortcount[n] = 1; 665e5c89e4eSSatish Balay n++; 666e5c89e4eSSatish Balay foundit:; 667e5c89e4eSSatish Balay } 668e5c89e4eSSatish Balay 669e32f2f54SBarry Smith perm = (PetscInt*)malloc(n*sizeof(PetscInt));if (!perm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_MEM,"Out of memory"); 670e5c89e4eSSatish Balay for (i=0; i<n; i++) perm[i] = i; 671e5c89e4eSSatish Balay ierr = PetscSortStrWithPermutation(n,(const char**)shortfunction,perm);CHKERRQ(ierr); 672e5c89e4eSSatish Balay 673e5c89e4eSSatish Balay ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] Memory usage sorted by function\n",rank);CHKERRQ(ierr); 674e5c89e4eSSatish Balay for (i=0; i<n; i++) { 67559ffdab8SBarry Smith ierr = PetscFPrintf(MPI_COMM_WORLD,fp,"[%d] %d %.0f %s()\n",rank,shortcount[perm[i]],(PetscLogDouble)shortlength[perm[i]],shortfunction[perm[i]]);CHKERRQ(ierr); 676e5c89e4eSSatish Balay } 677e5c89e4eSSatish Balay free(perm); 678e5c89e4eSSatish Balay free(shortlength); 67959ffdab8SBarry Smith free(shortcount); 680e5c89e4eSSatish Balay free((char**)shortfunction); 681f56c2debSBarry Smith err = fflush(fp); 682e32f2f54SBarry Smith if (err) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SYS,"fflush() failed on file"); 683e5c89e4eSSatish Balay if (rank != size-1) { 684e5c89e4eSSatish Balay ierr = MPI_Send(&dummy,1,MPIU_INT,rank+1,tag,MPI_COMM_WORLD);CHKERRQ(ierr); 685e5c89e4eSSatish Balay } 686e5c89e4eSSatish Balay PetscFunctionReturn(0); 687e5c89e4eSSatish Balay } 688e5c89e4eSSatish Balay 689e5c89e4eSSatish Balay /* ---------------------------------------------------------------------------- */ 690e5c89e4eSSatish Balay 691e5c89e4eSSatish Balay #undef __FUNCT__ 692e5c89e4eSSatish Balay #define __FUNCT__ "PetscMallocDebug" 693e5c89e4eSSatish Balay /*@C 694e5c89e4eSSatish Balay PetscMallocDebug - Turns on/off debugging for the memory management routines. 695e5c89e4eSSatish Balay 696e5c89e4eSSatish Balay Not Collective 697e5c89e4eSSatish Balay 698e5c89e4eSSatish Balay Input Parameter: 699e5c89e4eSSatish Balay . level - PETSC_TRUE or PETSC_FALSE 700e5c89e4eSSatish Balay 701e5c89e4eSSatish Balay Level: intermediate 702e5c89e4eSSatish Balay 703e5c89e4eSSatish Balay .seealso: CHKMEMQ(), PetscMallocValidate() 704e5c89e4eSSatish Balay @*/ 7057087cfbeSBarry Smith PetscErrorCode PetscMallocDebug(PetscBool level) 706e5c89e4eSSatish Balay { 707e5c89e4eSSatish Balay PetscFunctionBegin; 708e5c89e4eSSatish Balay TRdebugLevel = level; 709e5c89e4eSSatish Balay PetscFunctionReturn(0); 710e5c89e4eSSatish Balay } 711