1737f463aSAlp Dener #include <../src/tao/leastsquares/impls/brgn/brgn.h> 2737f463aSAlp Dener 30d71dc2bSXiang Huang /* Old code 4737f463aSAlp Dener static PetscErrorCode GNHessianProd(Mat H, Vec in, Vec out) 5737f463aSAlp Dener { 6737f463aSAlp Dener TAO_BRGN *gn; 7737f463aSAlp Dener PetscErrorCode ierr; 8737f463aSAlp Dener 9737f463aSAlp Dener PetscFunctionBegin; 10737f463aSAlp Dener ierr = MatShellGetContext(H, &gn);CHKERRQ(ierr); 11737f463aSAlp Dener ierr = MatMult(gn->subsolver->ls_jac, in, gn->r_work);CHKERRQ(ierr); 12737f463aSAlp Dener ierr = MatMultTranspose(gn->subsolver->ls_jac, gn->r_work, out);CHKERRQ(ierr); 13737f463aSAlp Dener ierr = VecAXPY(out, gn->lambda, in);CHKERRQ(ierr); 14737f463aSAlp Dener PetscFunctionReturn(0); 15737f463aSAlp Dener } 16737f463aSAlp Dener 17737f463aSAlp Dener static PetscErrorCode GNObjectiveGradientEval(Tao tao, Vec X, PetscReal *fcn, Vec G, void *ptr) 18737f463aSAlp Dener { 19737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)ptr; 20737f463aSAlp Dener PetscScalar xnorm2; 21737f463aSAlp Dener PetscErrorCode ierr; 22737f463aSAlp Dener 23737f463aSAlp Dener PetscFunctionBegin; 24737f463aSAlp Dener ierr = TaoComputeResidual(tao, X, tao->ls_res);CHKERRQ(ierr); 25737f463aSAlp Dener ierr = VecDotBegin(tao->ls_res, tao->ls_res, fcn);CHKERRQ(ierr); 26e1e80dc8SAlp Dener ierr = VecAXPBYPCZ(gn->x_work, 1.0, -1.0, 0.0, X, gn->x_old);CHKERRQ(ierr); 27737f463aSAlp Dener ierr = VecDotBegin(gn->x_work, gn->x_work, &xnorm2);CHKERRQ(ierr); 28737f463aSAlp Dener ierr = VecDotEnd(tao->ls_res, tao->ls_res, fcn);CHKERRQ(ierr); 29737f463aSAlp Dener ierr = VecDotEnd(gn->x_work, gn->x_work, &xnorm2);CHKERRQ(ierr); 30e1e80dc8SAlp Dener *fcn = 0.5*(*fcn) + 0.5*gn->lambda*xnorm2; 31737f463aSAlp Dener 32737f463aSAlp Dener ierr = TaoComputeResidualJacobian(tao, X, tao->ls_jac, tao->ls_jac_pre);CHKERRQ(ierr); 33737f463aSAlp Dener ierr = MatMultTranspose(tao->ls_jac, tao->ls_res, G);CHKERRQ(ierr); 34e1e80dc8SAlp Dener ierr = VecAXPBYPCZ(G, gn->lambda, -gn->lambda, 1.0, X, gn->x_old);CHKERRQ(ierr); 35737f463aSAlp Dener PetscFunctionReturn(0); 36737f463aSAlp Dener } 370d71dc2bSXiang Huang */ 380d71dc2bSXiang Huang 390d71dc2bSXiang Huang static PetscErrorCode GNHessianProd(Mat H, Vec in, Vec out) 400d71dc2bSXiang Huang { 410d71dc2bSXiang Huang TAO_BRGN *gn; 420d71dc2bSXiang Huang PetscErrorCode ierr; 430d71dc2bSXiang Huang 440d71dc2bSXiang Huang PetscFunctionBegin; 450d71dc2bSXiang Huang ierr = MatShellGetContext(H, &gn);CHKERRQ(ierr); 460d71dc2bSXiang Huang ierr = MatMult(gn->subsolver->ls_jac, in, gn->r_work);CHKERRQ(ierr); 470d71dc2bSXiang Huang ierr = MatMultTranspose(gn->subsolver->ls_jac, gn->r_work, out);CHKERRQ(ierr); 48*8ac80d48SXiang Huang /* out = out + lambda*in.*diag*/ 49*8ac80d48SXiang Huang ierr = VecPointwiseMult(gn->x_work, in, gn->diag);CHKERRQ(ierr); /* gn->x_work = in.*diag, where diag = epsilon^2 ./ sqrt(x.^2+epsilon^2).^3 */ 50*8ac80d48SXiang Huang ierr = VecAXPY(out, gn->lambda, gn->x_work);CHKERRQ(ierr); 510d71dc2bSXiang Huang 520d71dc2bSXiang Huang PetscFunctionReturn(0); 530d71dc2bSXiang Huang } 540d71dc2bSXiang Huang 550d71dc2bSXiang Huang static PetscErrorCode GNObjectiveGradientEval(Tao tao, Vec X, PetscReal *fcn, Vec G, void *ptr) 560d71dc2bSXiang Huang { 570d71dc2bSXiang Huang TAO_BRGN *gn = (TAO_BRGN *)ptr; 58*8ac80d48SXiang Huang PetscInt N; /* dimension of X */ 59*8ac80d48SXiang Huang PetscScalar xESum; 600d71dc2bSXiang Huang PetscErrorCode ierr; 610d71dc2bSXiang Huang 620d71dc2bSXiang Huang PetscFunctionBegin; 63*8ac80d48SXiang Huang /* compute objective */ 64*8ac80d48SXiang Huang /* compute first term ||ls_res||^2 */ 650d71dc2bSXiang Huang ierr = TaoComputeResidual(tao, X, tao->ls_res);CHKERRQ(ierr); 660d71dc2bSXiang Huang ierr = VecDotBegin(tao->ls_res, tao->ls_res, fcn);CHKERRQ(ierr); 670d71dc2bSXiang Huang ierr = VecDotEnd(tao->ls_res, tao->ls_res, fcn);CHKERRQ(ierr); 68*8ac80d48SXiang Huang /* add the second term lambda*sum(sqrt(x.^2+epsilon^2) - epsilon)*/ 69*8ac80d48SXiang Huang ierr = VecPointwiseMult(gn->x_work, X, X);CHKERRQ(ierr); 70*8ac80d48SXiang Huang ierr = VecShift(gn->x_work, gn->epsilon*gn->epsilon);CHKERRQ(ierr); 71*8ac80d48SXiang Huang ierr = VecSqrtAbs(gn->x_work);CHKERRQ(ierr); /* gn->x_work = sqrt(x.^2+epsilon^2) */ 72*8ac80d48SXiang Huang ierr = VecSum(gn->x_work, &xESum);CHKERRQ(ierr);CHKERRQ(ierr); 73*8ac80d48SXiang Huang ierr = VecGetSize(X, &N);CHKERRQ(ierr); 74*8ac80d48SXiang Huang *fcn = 0.5*(*fcn) + gn->lambda*(xESum - N*gn->epsilon); 750d71dc2bSXiang Huang 76*8ac80d48SXiang Huang /* compute gradient G */ 770d71dc2bSXiang Huang ierr = TaoComputeResidualJacobian(tao, X, tao->ls_jac, tao->ls_jac_pre);CHKERRQ(ierr); 780d71dc2bSXiang Huang ierr = MatMultTranspose(tao->ls_jac, tao->ls_res, G);CHKERRQ(ierr); 79*8ac80d48SXiang Huang /* compute G = G + lambda*(x./sqrt(x.^2+epsilon^2)) */ 80*8ac80d48SXiang Huang ierr = VecPointwiseDivide(gn->x_work, X, gn->x_work);CHKERRQ(ierr); /* reuse x_work = x./sqrt(x.^2+epsilon^2) */ 81*8ac80d48SXiang Huang ierr = VecAXPY(G, gn->lambda, gn->x_work);CHKERRQ(ierr); 820d71dc2bSXiang Huang 830d71dc2bSXiang Huang PetscFunctionReturn(0); 840d71dc2bSXiang Huang } 850d71dc2bSXiang Huang 86737f463aSAlp Dener 87737f463aSAlp Dener static PetscErrorCode GNComputeHessian(Tao tao, Vec X, Mat H, Mat Hpre, void *ptr) 88737f463aSAlp Dener { 89*8ac80d48SXiang Huang TAO_BRGN *gn = (TAO_BRGN *)ptr; 90737f463aSAlp Dener PetscErrorCode ierr; 91737f463aSAlp Dener 92737f463aSAlp Dener PetscFunctionBegin; 93e1e80dc8SAlp Dener ierr = TaoComputeResidualJacobian(tao, X, tao->ls_jac, tao->ls_jac_pre);CHKERRQ(ierr); 940d71dc2bSXiang Huang 95*8ac80d48SXiang Huang /* calculate and store diagonal matrix as a vector: diag = epsilon^2 ./ sqrt(x.^2+epsilon^2).^3*/ 96*8ac80d48SXiang Huang ierr = VecPointwiseMult(gn->x_work, X, X);CHKERRQ(ierr); 97*8ac80d48SXiang Huang ierr = VecShift(gn->x_work, gn->epsilon*gn->epsilon);CHKERRQ(ierr); 98*8ac80d48SXiang Huang ierr = VecCopy(gn->x_work, gn->diag);CHKERRQ(ierr); /* gn->diag = x.^2+epsilon^2 */ 99*8ac80d48SXiang Huang ierr = VecSqrtAbs(gn->x_work);CHKERRQ(ierr); /* gn->x_work = sqrt(x.^2+epsilon^2) */ 100*8ac80d48SXiang Huang ierr = VecPointwiseMult(gn->diag, gn->x_work, gn->diag);CHKERRQ(ierr); /* gn->diag = sqrt(x.^2+epsilon^2).^3 */ 101*8ac80d48SXiang Huang ierr = VecReciprocal(gn->diag);CHKERRQ(ierr); 102*8ac80d48SXiang Huang ierr = VecScale(gn->diag, gn->epsilon*gn->epsilon);CHKERRQ(ierr); 103*8ac80d48SXiang Huang 104e1e80dc8SAlp Dener PetscFunctionReturn(0); 105e1e80dc8SAlp Dener } 106e1e80dc8SAlp Dener 107e1e80dc8SAlp Dener static PetscErrorCode GNHookFunction(Tao tao, PetscInt iter) 108e1e80dc8SAlp Dener { 109e1e80dc8SAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->user_update; 110e1e80dc8SAlp Dener PetscErrorCode ierr; 111e1e80dc8SAlp Dener 112e1e80dc8SAlp Dener PetscFunctionBegin; 113e1e80dc8SAlp Dener /* Update basic tao information from the subsolver */ 114e1e80dc8SAlp Dener gn->parent->nfuncs = tao->nfuncs; 115e1e80dc8SAlp Dener gn->parent->ngrads = tao->ngrads; 116e1e80dc8SAlp Dener gn->parent->nfuncgrads = tao->nfuncgrads; 117e1e80dc8SAlp Dener gn->parent->nhess = tao->nhess; 118e1e80dc8SAlp Dener gn->parent->niter = tao->niter; 119e1e80dc8SAlp Dener gn->parent->ksp_its = tao->ksp_its; 120e1e80dc8SAlp Dener gn->parent->ksp_tot_its = tao->ksp_tot_its; 121e1e80dc8SAlp Dener ierr = TaoGetConvergedReason(tao, &gn->parent->reason);CHKERRQ(ierr); 122e1e80dc8SAlp Dener /* Update the solution vectors */ 123e1e80dc8SAlp Dener if (iter == 0) { 124e1e80dc8SAlp Dener ierr = VecSet(gn->x_old, 0.0);CHKERRQ(ierr); 125e1e80dc8SAlp Dener } else { 126e1e80dc8SAlp Dener ierr = VecCopy(tao->solution, gn->x_old);CHKERRQ(ierr); 127e1e80dc8SAlp Dener ierr = VecCopy(tao->solution, gn->parent->solution);CHKERRQ(ierr); 128e1e80dc8SAlp Dener } 129e1e80dc8SAlp Dener /* Update the gradient */ 130e1e80dc8SAlp Dener ierr = VecCopy(tao->gradient, gn->parent->gradient);CHKERRQ(ierr); 131e1e80dc8SAlp Dener /* Call general purpose update function */ 132e1e80dc8SAlp Dener if (gn->parent->ops->update) { 133e1e80dc8SAlp Dener ierr = (*gn->parent->ops->update)(gn->parent, gn->parent->niter);CHKERRQ(ierr); 134737f463aSAlp Dener } 135737f463aSAlp Dener PetscFunctionReturn(0); 136737f463aSAlp Dener } 137737f463aSAlp Dener 138737f463aSAlp Dener static PetscErrorCode TaoSolve_BRGN(Tao tao) 139737f463aSAlp Dener { 140737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 141737f463aSAlp Dener PetscErrorCode ierr; 142737f463aSAlp Dener 143737f463aSAlp Dener PetscFunctionBegin; 144737f463aSAlp Dener ierr = TaoSolve(gn->subsolver);CHKERRQ(ierr); 145e1e80dc8SAlp Dener /* Update basic tao information from the subsolver */ 146e1e80dc8SAlp Dener tao->nfuncs = gn->subsolver->nfuncs; 147e1e80dc8SAlp Dener tao->ngrads = gn->subsolver->ngrads; 148e1e80dc8SAlp Dener tao->nfuncgrads = gn->subsolver->nfuncgrads; 149e1e80dc8SAlp Dener tao->nhess = gn->subsolver->nhess; 150e1e80dc8SAlp Dener tao->niter = gn->subsolver->niter; 151e1e80dc8SAlp Dener tao->ksp_its = gn->subsolver->ksp_its; 152e1e80dc8SAlp Dener tao->ksp_tot_its = gn->subsolver->ksp_tot_its; 153e1e80dc8SAlp Dener ierr = TaoGetConvergedReason(gn->subsolver, &tao->reason);CHKERRQ(ierr); 154e1e80dc8SAlp Dener /* Update vectors */ 155e1e80dc8SAlp Dener ierr = VecCopy(gn->subsolver->solution, tao->solution);CHKERRQ(ierr); 156e1e80dc8SAlp Dener ierr = VecCopy(gn->subsolver->gradient, tao->gradient);CHKERRQ(ierr); 157737f463aSAlp Dener PetscFunctionReturn(0); 158737f463aSAlp Dener } 159737f463aSAlp Dener 160737f463aSAlp Dener static PetscErrorCode TaoSetFromOptions_BRGN(PetscOptionItems *PetscOptionsObject,Tao tao) 161737f463aSAlp Dener { 162737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 163737f463aSAlp Dener PetscErrorCode ierr; 164737f463aSAlp Dener 165737f463aSAlp Dener PetscFunctionBegin; 166*8ac80d48SXiang Huang /* old Tikhonov regularization code 167737f463aSAlp Dener ierr = PetscOptionsHead(PetscOptionsObject,"Gauss-Newton method for least-squares problems using Tikhonov regularization");CHKERRQ(ierr); 168737f463aSAlp Dener ierr = PetscOptionsReal("-tao_brgn_lambda", "Tikhonov regularization factor", "", gn->lambda, &gn->lambda, NULL);CHKERRQ(ierr); 169*8ac80d48SXiang Huang */ 170*8ac80d48SXiang Huang ierr = PetscOptionsHead(PetscOptionsObject,"least-squares problems with L1 regularizer: ||f(x)||^2 + lambda*||x||_1. Currently L1-norm is approximated with smooth form");CHKERRQ(ierr); 171*8ac80d48SXiang Huang ierr = PetscOptionsReal("-tao_brgn_lambda", "L1-norm regularizer weight", "", gn->lambda, &gn->lambda, NULL);CHKERRQ(ierr); 172*8ac80d48SXiang Huang ierr = PetscOptionsReal("-tao_brgn_epsilon", "L1-norm smooth approximation parameter: ||x||_1 = sum(sqrt(x.^2+epsilon^2)-epsilon)", "", gn->epsilon, &gn->epsilon, NULL);CHKERRQ(ierr); 173737f463aSAlp Dener ierr = PetscOptionsTail();CHKERRQ(ierr); 174737f463aSAlp Dener ierr = TaoSetFromOptions(gn->subsolver);CHKERRQ(ierr); 175737f463aSAlp Dener PetscFunctionReturn(0); 176737f463aSAlp Dener } 177737f463aSAlp Dener 178737f463aSAlp Dener static PetscErrorCode TaoView_BRGN(Tao tao, PetscViewer viewer) 179737f463aSAlp Dener { 180737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 181737f463aSAlp Dener PetscErrorCode ierr; 182737f463aSAlp Dener 183737f463aSAlp Dener PetscFunctionBegin; 184e1e80dc8SAlp Dener ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 185737f463aSAlp Dener ierr = TaoView(gn->subsolver, viewer);CHKERRQ(ierr); 186e1e80dc8SAlp Dener ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 187737f463aSAlp Dener PetscFunctionReturn(0); 188737f463aSAlp Dener } 189737f463aSAlp Dener 190737f463aSAlp Dener static PetscErrorCode TaoSetUp_BRGN(Tao tao) 191737f463aSAlp Dener { 192737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 193737f463aSAlp Dener PetscErrorCode ierr; 194737f463aSAlp Dener PetscBool is_bnls, is_bntr, is_bntl; 195737f463aSAlp Dener PetscInt i, nx, Nx; 196737f463aSAlp Dener 197737f463aSAlp Dener PetscFunctionBegin; 198737f463aSAlp Dener if (!tao->ls_res) SETERRQ(PetscObjectComm((PetscObject)tao), PETSC_ERR_ORDER, "TaoSetResidualRoutine() must be called before setup!"); 199737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver, TAOBNLS, &is_bnls);CHKERRQ(ierr); 200737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver, TAOBNTR, &is_bntr);CHKERRQ(ierr); 201737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver, TAOBNTL, &is_bntl);CHKERRQ(ierr); 202737f463aSAlp Dener if ((is_bnls || is_bntr || is_bntl) && !tao->ls_jac) SETERRQ(PetscObjectComm((PetscObject)tao), PETSC_ERR_ORDER, "TaoSetResidualJacobianRoutine() must be called before setup!"); 203e1e80dc8SAlp Dener if (!tao->gradient){ 204e1e80dc8SAlp Dener ierr = VecDuplicate(tao->solution, &tao->gradient);CHKERRQ(ierr); 205e1e80dc8SAlp Dener } 206737f463aSAlp Dener if (!gn->x_work){ 207737f463aSAlp Dener ierr = VecDuplicate(tao->solution, &gn->x_work);CHKERRQ(ierr); 208737f463aSAlp Dener } 209737f463aSAlp Dener if (!gn->r_work){ 210737f463aSAlp Dener ierr = VecDuplicate(tao->ls_res, &gn->r_work);CHKERRQ(ierr); 211737f463aSAlp Dener } 212e1e80dc8SAlp Dener if (!gn->x_old) { 213e1e80dc8SAlp Dener ierr = VecDuplicate(tao->solution, &gn->x_old);CHKERRQ(ierr); 214e1e80dc8SAlp Dener ierr = VecSet(gn->x_old, 0.0);CHKERRQ(ierr); 215e1e80dc8SAlp Dener } 216*8ac80d48SXiang Huang if (!gn->diag){ 217*8ac80d48SXiang Huang ierr = VecDuplicate(tao->solution, &gn->diag);CHKERRQ(ierr); 218*8ac80d48SXiang Huang ierr = VecSet(gn->diag, 0.0);CHKERRQ(ierr); 219*8ac80d48SXiang Huang } 2200d71dc2bSXiang Huang 221e1e80dc8SAlp Dener if (!tao->setupcalled) { 222737f463aSAlp Dener /* Hessian setup */ 223737f463aSAlp Dener ierr = VecGetLocalSize(tao->solution, &nx);CHKERRQ(ierr); 224737f463aSAlp Dener ierr = VecGetSize(tao->solution, &Nx);CHKERRQ(ierr); 225737f463aSAlp Dener ierr = MatSetSizes(gn->H, nx, nx, Nx, Nx);CHKERRQ(ierr); 226737f463aSAlp Dener ierr = MatSetType(gn->H, MATSHELL);CHKERRQ(ierr); 227737f463aSAlp Dener ierr = MatSetUp(gn->H);CHKERRQ(ierr); 228737f463aSAlp Dener ierr = MatShellSetOperation(gn->H, MATOP_MULT, (void (*)(void))GNHessianProd);CHKERRQ(ierr); 229737f463aSAlp Dener ierr = MatShellSetContext(gn->H, (void*)gn);CHKERRQ(ierr); 230737f463aSAlp Dener /* Subsolver setup */ 231e1e80dc8SAlp Dener ierr = TaoSetUpdate(gn->subsolver, GNHookFunction, (void*)gn);CHKERRQ(ierr); 232737f463aSAlp Dener ierr = TaoSetInitialVector(gn->subsolver, tao->solution);CHKERRQ(ierr); 233737f463aSAlp Dener if (tao->bounded) { 234737f463aSAlp Dener ierr = TaoSetVariableBounds(gn->subsolver, tao->XL, tao->XU);CHKERRQ(ierr); 235737f463aSAlp Dener } 236737f463aSAlp Dener ierr = TaoSetResidualRoutine(gn->subsolver, tao->ls_res, tao->ops->computeresidual, tao->user_lsresP);CHKERRQ(ierr); 2374ffbe8acSAlp Dener ierr = TaoSetJacobianResidualRoutine(gn->subsolver, tao->ls_jac, tao->ls_jac, tao->ops->computeresidualjacobian, tao->user_lsjacP);CHKERRQ(ierr); 238737f463aSAlp Dener ierr = TaoSetObjectiveAndGradientRoutine(gn->subsolver, GNObjectiveGradientEval, (void*)gn);CHKERRQ(ierr); 239737f463aSAlp Dener ierr = TaoSetHessianRoutine(gn->subsolver, gn->H, gn->H, GNComputeHessian, (void*)gn);CHKERRQ(ierr); 240e1e80dc8SAlp Dener /* Propagate some options down */ 241e1e80dc8SAlp Dener ierr = TaoSetTolerances(gn->subsolver, tao->gatol, tao->grtol, tao->gttol);CHKERRQ(ierr); 242e1e80dc8SAlp Dener ierr = TaoSetMaximumIterations(gn->subsolver, tao->max_it);CHKERRQ(ierr); 243e1e80dc8SAlp Dener ierr = TaoSetMaximumFunctionEvaluations(gn->subsolver, tao->max_funcs);CHKERRQ(ierr); 244737f463aSAlp Dener for (i=0; i<tao->numbermonitors; ++i) { 245737f463aSAlp Dener ierr = TaoSetMonitor(gn->subsolver, tao->monitor[i], tao->monitorcontext[i], tao->monitordestroy[i]);CHKERRQ(ierr); 246737f463aSAlp Dener ierr = PetscObjectReference((PetscObject)(tao->monitorcontext[i]));CHKERRQ(ierr); 247737f463aSAlp Dener } 248737f463aSAlp Dener ierr = TaoSetUp(gn->subsolver);CHKERRQ(ierr); 249e1e80dc8SAlp Dener } 250737f463aSAlp Dener PetscFunctionReturn(0); 251737f463aSAlp Dener } 252737f463aSAlp Dener 253737f463aSAlp Dener static PetscErrorCode TaoDestroy_BRGN(Tao tao) 254737f463aSAlp Dener { 255737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 256737f463aSAlp Dener PetscErrorCode ierr; 257737f463aSAlp Dener 258737f463aSAlp Dener PetscFunctionBegin; 259737f463aSAlp Dener if (tao->setupcalled) { 260e1e80dc8SAlp Dener ierr = VecDestroy(&tao->gradient);CHKERRQ(ierr); 261737f463aSAlp Dener ierr = VecDestroy(&gn->x_work);CHKERRQ(ierr); 262737f463aSAlp Dener ierr = VecDestroy(&gn->r_work);CHKERRQ(ierr); 263e1e80dc8SAlp Dener ierr = VecDestroy(&gn->x_old);CHKERRQ(ierr); 264*8ac80d48SXiang Huang ierr = VecDestroy(&gn->diag);CHKERRQ(ierr); 265737f463aSAlp Dener } 266737f463aSAlp Dener ierr = MatDestroy(&gn->H);CHKERRQ(ierr); 267737f463aSAlp Dener ierr = TaoDestroy(&gn->subsolver);CHKERRQ(ierr); 268e1e80dc8SAlp Dener gn->parent = NULL; 269737f463aSAlp Dener ierr = PetscFree(tao->data);CHKERRQ(ierr); 270737f463aSAlp Dener PetscFunctionReturn(0); 271737f463aSAlp Dener } 272737f463aSAlp Dener 2733850be85SAlp Dener /*MC 2743850be85SAlp Dener TAOBRGN - Bounded Regularized Gauss-Newton method for solving nonlinear least-squares 2753850be85SAlp Dener problems with bound constraints. This algorithm is a thin wrapper around TAOBNTL 2763850be85SAlp Dener that constructs the Guass-Newton problem with the user-provided least-squares 2773850be85SAlp Dener residual and Jacobian. The problem is regularized with an L2-norm proximal point 2783850be85SAlp Dener term. 2793850be85SAlp Dener 2803850be85SAlp Dener Options Database Keys: 2813850be85SAlp Dener + -tao_bqnk_max_cg_its - maximum number of bounded conjugate-gradient iterations taken in each Newton loop 2823850be85SAlp Dener . -tao_bqnk_init_type - trust radius initialization method ("constant", "direction", "interpolation") 2833850be85SAlp Dener . -tao_bqnk_update_type - trust radius update method ("step", "direction", "interpolation") 2843850be85SAlp Dener - -tao_bqnk_as_type - active-set estimation method ("none", "bertsekas") 2853850be85SAlp Dener 2863850be85SAlp Dener Level: beginner 2873850be85SAlp Dener M*/ 288737f463aSAlp Dener PETSC_EXTERN PetscErrorCode TaoCreate_BRGN(Tao tao) 289737f463aSAlp Dener { 290737f463aSAlp Dener TAO_BRGN *gn; 291737f463aSAlp Dener PetscErrorCode ierr; 292737f463aSAlp Dener 293737f463aSAlp Dener PetscFunctionBegin; 294737f463aSAlp Dener ierr = PetscNewLog(tao,&gn);CHKERRQ(ierr); 295737f463aSAlp Dener 296737f463aSAlp Dener tao->ops->destroy = TaoDestroy_BRGN; 297737f463aSAlp Dener tao->ops->setup = TaoSetUp_BRGN; 298737f463aSAlp Dener tao->ops->setfromoptions = TaoSetFromOptions_BRGN; 299737f463aSAlp Dener tao->ops->view = TaoView_BRGN; 300737f463aSAlp Dener tao->ops->solve = TaoSolve_BRGN; 301737f463aSAlp Dener 302737f463aSAlp Dener tao->data = (void*)gn; 303e1e80dc8SAlp Dener gn->lambda = 1e-4; 304*8ac80d48SXiang Huang gn->epsilon = 1e-6; 305e1e80dc8SAlp Dener gn->parent = tao; 306737f463aSAlp Dener 307737f463aSAlp Dener ierr = MatCreate(PetscObjectComm((PetscObject)tao), &gn->H);CHKERRQ(ierr); 308737f463aSAlp Dener ierr = MatSetOptionsPrefix(gn->H, "tao_brgn_hessian_");CHKERRQ(ierr); 309737f463aSAlp Dener 310737f463aSAlp Dener ierr = TaoCreate(PetscObjectComm((PetscObject)tao), &gn->subsolver);CHKERRQ(ierr); 311737f463aSAlp Dener ierr = TaoSetType(gn->subsolver, TAOBNLS);CHKERRQ(ierr); 312737f463aSAlp Dener ierr = TaoSetOptionsPrefix(gn->subsolver, "tao_brgn_subsolver_");CHKERRQ(ierr); 313e1e80dc8SAlp Dener PetscFunctionReturn(0); 314e1e80dc8SAlp Dener } 315e1e80dc8SAlp Dener 316e1e80dc8SAlp Dener /*@C 317e1e80dc8SAlp Dener TaoBRGNGetSubsolver - Get the pointer to the subsolver inside BRGN 318e1e80dc8SAlp Dener 319e1e80dc8SAlp Dener Collective on Tao 320e1e80dc8SAlp Dener 321e1e80dc8SAlp Dener Level: developer 322e1e80dc8SAlp Dener 323e1e80dc8SAlp Dener Input Parameters: 324e1e80dc8SAlp Dener + tao - the Tao solver context 325e1e80dc8SAlp Dener - subsolver - the Tao sub-solver context 326e1e80dc8SAlp Dener @*/ 327e1e80dc8SAlp Dener PetscErrorCode TaoBRGNGetSubsolver(Tao tao, Tao *subsolver) 328e1e80dc8SAlp Dener { 329e1e80dc8SAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 330e1e80dc8SAlp Dener 331e1e80dc8SAlp Dener PetscFunctionBegin; 332e1e80dc8SAlp Dener *subsolver = gn->subsolver; 333737f463aSAlp Dener PetscFunctionReturn(0); 334737f463aSAlp Dener } 335737f463aSAlp Dener 336737f463aSAlp Dener /*@C 337737f463aSAlp Dener TaoBRGNSetTikhonovLambda - Set the Tikhonov regularization factor for the Gauss-Newton least-squares algorithm 338737f463aSAlp Dener 339737f463aSAlp Dener Collective on Tao 340737f463aSAlp Dener 341737f463aSAlp Dener Level: developer 342737f463aSAlp Dener 343737f463aSAlp Dener Input Parameters: 344737f463aSAlp Dener + tao - the Tao solver context 345737f463aSAlp Dener - lambda - Tikhonov regularization factor 346737f463aSAlp Dener @*/ 347737f463aSAlp Dener PetscErrorCode TaoBRGNSetTikhonovLambda(Tao tao, PetscReal lambda) 348737f463aSAlp Dener { 349737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 350737f463aSAlp Dener 351*8ac80d48SXiang Huang /* Initialize lambda here */ 3520d71dc2bSXiang Huang 353737f463aSAlp Dener PetscFunctionBegin; 354737f463aSAlp Dener gn->lambda = lambda; 355737f463aSAlp Dener PetscFunctionReturn(0); 356737f463aSAlp Dener } 3570d71dc2bSXiang Huang 358*8ac80d48SXiang Huang /*@C 359*8ac80d48SXiang Huang TaoBRGNSetL1SmoothEpsilon - Set the L1-norm smooth approximation parameter for L1-regularized least-squares algorithm 360*8ac80d48SXiang Huang 361*8ac80d48SXiang Huang Collective on Tao 362*8ac80d48SXiang Huang 363*8ac80d48SXiang Huang Level: developer 364*8ac80d48SXiang Huang 365*8ac80d48SXiang Huang Input Parameters: 366*8ac80d48SXiang Huang + tao - the Tao solver context 367*8ac80d48SXiang Huang - epsilon - L1-norm smooth approximation parameter 368*8ac80d48SXiang Huang @*/ 369*8ac80d48SXiang Huang PetscErrorCode TaoBRGNSetL1SmoothEpsilon(Tao tao, PetscReal epsilon) 370*8ac80d48SXiang Huang { 371*8ac80d48SXiang Huang TAO_BRGN *gn = (TAO_BRGN *)tao->data; 372*8ac80d48SXiang Huang 373*8ac80d48SXiang Huang /* Initialize epsilon here */ 374*8ac80d48SXiang Huang 375*8ac80d48SXiang Huang PetscFunctionBegin; 376*8ac80d48SXiang Huang gn->epsilon = epsilon; 377*8ac80d48SXiang Huang PetscFunctionReturn(0); 378*8ac80d48SXiang Huang } 379*8ac80d48SXiang Huang /* XH: done TaoBRGNSetL1SmoothEpsilon by copy TaoBRGNSetTikhonovLambda in peststao.h, brgn.c and zbrgnf.c. 380*8ac80d48SXiang Huang maybe change the name of Tikhonov in TaoBRGNSetTikhonovLambda() etc, as lambda is no longer the Tikhonov regularizer weight but the L1 regularizer weight */ 381