1463fc0ecSAlp Dener #include <../src/tao/leastsquares/impls/brgn/brgn.h> /*I "petsctao.h" I*/ 2737f463aSAlp Dener 3470ec3f8SXiang Huang #define BRGN_REGULARIZATION_USER 0 4470ec3f8SXiang Huang #define BRGN_REGULARIZATION_L2PROX 1 5a1c74439SHansol Suh #define BRGN_REGULARIZATION_L2PURE 2 6a1c74439SHansol Suh #define BRGN_REGULARIZATION_L1DICT 3 7a1c74439SHansol Suh #define BRGN_REGULARIZATION_TYPES 4 8a3c390cfSAlp Dener 970c34337SHansol Suh static const char *BRGN_REGULARIZATION_TABLE[64] = {"user","l2prox","l2pure","l1dict"}; 10a3c390cfSAlp Dener 110d71dc2bSXiang Huang static PetscErrorCode GNHessianProd(Mat H,Vec in,Vec out) 120d71dc2bSXiang Huang { 130d71dc2bSXiang Huang TAO_BRGN *gn; 140d71dc2bSXiang Huang PetscErrorCode ierr; 150d71dc2bSXiang Huang 160d71dc2bSXiang Huang PetscFunctionBegin; 170d71dc2bSXiang Huang ierr = MatShellGetContext(H,&gn);CHKERRQ(ierr); 180d71dc2bSXiang Huang ierr = MatMult(gn->subsolver->ls_jac,in,gn->r_work);CHKERRQ(ierr); 190d71dc2bSXiang Huang ierr = MatMultTranspose(gn->subsolver->ls_jac,gn->r_work,out);CHKERRQ(ierr); 20a3c390cfSAlp Dener switch (gn->reg_type) { 21470ec3f8SXiang Huang case BRGN_REGULARIZATION_USER: 22a3c390cfSAlp Dener ierr = MatMult(gn->Hreg,in,gn->x_work);CHKERRQ(ierr); 238ac80d48SXiang Huang ierr = VecAXPY(out,gn->lambda,gn->x_work);CHKERRQ(ierr); 24a3c390cfSAlp Dener break; 25a1c74439SHansol Suh case BRGN_REGULARIZATION_L2PURE: 26a1c74439SHansol Suh ierr = VecAXPY(out,gn->lambda,in);CHKERRQ(ierr); 27a1c74439SHansol Suh break; 28470ec3f8SXiang Huang case BRGN_REGULARIZATION_L2PROX: 29a3c390cfSAlp Dener ierr = VecAXPY(out,gn->lambda,in);CHKERRQ(ierr); 30a3c390cfSAlp Dener break; 31470ec3f8SXiang Huang case BRGN_REGULARIZATION_L1DICT: 32a3c390cfSAlp Dener /* out = out + lambda*D'*(diag.*(D*in)) */ 33a3c390cfSAlp Dener if (gn->D) { 34a3c390cfSAlp Dener ierr = MatMult(gn->D,in,gn->y);CHKERRQ(ierr);/* y = D*in */ 35a3c390cfSAlp Dener } else { 36a3c390cfSAlp Dener ierr = VecCopy(in,gn->y);CHKERRQ(ierr); 37a3c390cfSAlp Dener } 38a3c390cfSAlp Dener ierr = VecPointwiseMult(gn->y_work,gn->diag,gn->y);CHKERRQ(ierr); /* y_work = diag.*(D*in), where diag = epsilon^2 ./ sqrt(x.^2+epsilon^2).^3 */ 39a3c390cfSAlp Dener if (gn->D) { 40a3c390cfSAlp Dener ierr = MatMultTranspose(gn->D,gn->y_work,gn->x_work);CHKERRQ(ierr); /* x_work = D'*(diag.*(D*in)) */ 41a3c390cfSAlp Dener } else { 42a3c390cfSAlp Dener ierr = VecCopy(gn->y_work,gn->x_work);CHKERRQ(ierr); 43a3c390cfSAlp Dener } 44a3c390cfSAlp Dener ierr = VecAXPY(out,gn->lambda,gn->x_work);CHKERRQ(ierr); 45a3c390cfSAlp Dener break; 46a3c390cfSAlp Dener } 470d71dc2bSXiang Huang PetscFunctionReturn(0); 480d71dc2bSXiang Huang } 490d71dc2bSXiang Huang 500d71dc2bSXiang Huang static PetscErrorCode GNObjectiveGradientEval(Tao tao,Vec X,PetscReal *fcn,Vec G,void *ptr) 510d71dc2bSXiang Huang { 520d71dc2bSXiang Huang TAO_BRGN *gn = (TAO_BRGN *)ptr; 538e85b1b3SXiang Huang PetscInt K; /* dimension of D*X */ 547cea06e1SXiang Huang PetscScalar yESum; 550d71dc2bSXiang Huang PetscErrorCode ierr; 56a3c390cfSAlp Dener PetscReal f_reg; 570d71dc2bSXiang Huang 580d71dc2bSXiang Huang PetscFunctionBegin; 598e85b1b3SXiang Huang /* compute objective *fcn*/ 60a3c390cfSAlp Dener /* compute first term 0.5*||ls_res||_2^2 */ 610d71dc2bSXiang Huang ierr = TaoComputeResidual(tao,X,tao->ls_res);CHKERRQ(ierr); 62a3c390cfSAlp Dener ierr = VecDot(tao->ls_res,tao->ls_res,fcn);CHKERRQ(ierr); 63a3c390cfSAlp Dener *fcn *= 0.5; 64a3c390cfSAlp Dener /* compute gradient G */ 65a3c390cfSAlp Dener ierr = TaoComputeResidualJacobian(tao,X,tao->ls_jac,tao->ls_jac_pre);CHKERRQ(ierr); 66a3c390cfSAlp Dener ierr = MatMultTranspose(tao->ls_jac,tao->ls_res,G);CHKERRQ(ierr); 67a3c390cfSAlp Dener /* add the regularization contribution */ 68a3c390cfSAlp Dener switch (gn->reg_type) { 69470ec3f8SXiang Huang case BRGN_REGULARIZATION_USER: 70a3c390cfSAlp Dener ierr = (*gn->regularizerobjandgrad)(tao,X,&f_reg,gn->x_work,gn->reg_obj_ctx);CHKERRQ(ierr); 71a3c390cfSAlp Dener *fcn += gn->lambda*f_reg; 72a3c390cfSAlp Dener ierr = VecAXPY(G,gn->lambda,gn->x_work);CHKERRQ(ierr); 73a3c390cfSAlp Dener break; 74a1c74439SHansol Suh case BRGN_REGULARIZATION_L2PURE: 75a1c74439SHansol Suh /* compute f = f + lambda*0.5*xk'*xk */ 76a1c74439SHansol Suh ierr = VecDot(X,X,&f_reg);CHKERRQ(ierr); 77a1c74439SHansol Suh *fcn += gn->lambda*0.5*f_reg; 78a1c74439SHansol Suh /* compute G = G + lambda*xk */ 79a1c74439SHansol Suh ierr = VecAXPY(G,gn->lambda,X);CHKERRQ(ierr); 80a1c74439SHansol Suh break; 81470ec3f8SXiang Huang case BRGN_REGULARIZATION_L2PROX: 821fc140a9SXiang Huang /* compute f = f + lambda*0.5*(xk - xkm1)'*(xk - xkm1) */ 831fc140a9SXiang Huang ierr = VecAXPBYPCZ(gn->x_work,1.0,-1.0,0.0,X,gn->x_old);CHKERRQ(ierr); 84a3c390cfSAlp Dener ierr = VecDot(gn->x_work,gn->x_work,&f_reg);CHKERRQ(ierr); 85a3c390cfSAlp Dener *fcn += gn->lambda*0.5*f_reg; 86a3c390cfSAlp Dener /* compute G = G + lambda*(xk - xkm1) */ 87a3c390cfSAlp Dener ierr = VecAXPBYPCZ(G,gn->lambda,-gn->lambda,1.0,X,gn->x_old);CHKERRQ(ierr); 88a3c390cfSAlp Dener break; 89470ec3f8SXiang Huang case BRGN_REGULARIZATION_L1DICT: 90a3c390cfSAlp Dener /* compute f = f + lambda*sum(sqrt(y.^2+epsilon^2) - epsilon), where y = D*x*/ 91a3c390cfSAlp Dener if (gn->D) { 927cea06e1SXiang Huang ierr = MatMult(gn->D,X,gn->y);CHKERRQ(ierr);/* y = D*x */ 93a3c390cfSAlp Dener } else { 94a3c390cfSAlp Dener ierr = VecCopy(X,gn->y);CHKERRQ(ierr); 95a3c390cfSAlp Dener } 967cea06e1SXiang Huang ierr = VecPointwiseMult(gn->y_work,gn->y,gn->y);CHKERRQ(ierr); 977cea06e1SXiang Huang ierr = VecShift(gn->y_work,gn->epsilon*gn->epsilon);CHKERRQ(ierr); 987cea06e1SXiang Huang ierr = VecSqrtAbs(gn->y_work);CHKERRQ(ierr); /* gn->y_work = sqrt(y.^2+epsilon^2) */ 99*c3b366b1Sprj- ierr = VecSum(gn->y_work,&yESum);CHKERRQ(ierr); 1008e85b1b3SXiang Huang ierr = VecGetSize(gn->y,&K);CHKERRQ(ierr); 101a3c390cfSAlp Dener *fcn += gn->lambda*(yESum - K*gn->epsilon); 1027cea06e1SXiang Huang /* compute G = G + lambda*D'*(y./sqrt(y.^2+epsilon^2)),where y = D*x */ 1037cea06e1SXiang Huang ierr = VecPointwiseDivide(gn->y_work,gn->y,gn->y_work);CHKERRQ(ierr); /* reuse y_work = y./sqrt(y.^2+epsilon^2) */ 104a3c390cfSAlp Dener if (gn->D) { 1057cea06e1SXiang Huang ierr = MatMultTranspose(gn->D,gn->y_work,gn->x_work);CHKERRQ(ierr); 106a3c390cfSAlp Dener } else { 107a3c390cfSAlp Dener ierr = VecCopy(gn->y_work,gn->x_work);CHKERRQ(ierr); 108a3c390cfSAlp Dener } 1098ac80d48SXiang Huang ierr = VecAXPY(G,gn->lambda,gn->x_work);CHKERRQ(ierr); 110a3c390cfSAlp Dener break; 111a3c390cfSAlp Dener } 1120d71dc2bSXiang Huang PetscFunctionReturn(0); 1130d71dc2bSXiang Huang } 1140d71dc2bSXiang Huang 115737f463aSAlp Dener static PetscErrorCode GNComputeHessian(Tao tao,Vec X,Mat H,Mat Hpre,void *ptr) 116737f463aSAlp Dener { 1178ac80d48SXiang Huang TAO_BRGN *gn = (TAO_BRGN *)ptr; 118737f463aSAlp Dener PetscErrorCode ierr; 119737f463aSAlp Dener 120737f463aSAlp Dener PetscFunctionBegin; 121e1e80dc8SAlp Dener ierr = TaoComputeResidualJacobian(tao,X,tao->ls_jac,tao->ls_jac_pre);CHKERRQ(ierr); 1220d71dc2bSXiang Huang 123a3c390cfSAlp Dener switch (gn->reg_type) { 124470ec3f8SXiang Huang case BRGN_REGULARIZATION_USER: 125a3c390cfSAlp Dener ierr = (*gn->regularizerhessian)(tao,X,gn->Hreg,gn->reg_hess_ctx);CHKERRQ(ierr); 126a3c390cfSAlp Dener break; 127a1c74439SHansol Suh case BRGN_REGULARIZATION_L2PURE: 128a1c74439SHansol Suh break; 129470ec3f8SXiang Huang case BRGN_REGULARIZATION_L2PROX: 130a3c390cfSAlp Dener break; 131470ec3f8SXiang Huang case BRGN_REGULARIZATION_L1DICT: 1327cea06e1SXiang Huang /* calculate and store diagonal matrix as a vector: diag = epsilon^2 ./ sqrt(x.^2+epsilon^2).^3* --> diag = epsilon^2 ./ sqrt(y.^2+epsilon^2).^3,where y = D*x */ 133a3c390cfSAlp Dener if (gn->D) { 1347cea06e1SXiang Huang ierr = MatMult(gn->D,X,gn->y);CHKERRQ(ierr);/* y = D*x */ 135a3c390cfSAlp Dener } else { 136a3c390cfSAlp Dener ierr = VecCopy(X,gn->y);CHKERRQ(ierr); 137a3c390cfSAlp Dener } 1387cea06e1SXiang Huang ierr = VecPointwiseMult(gn->y_work,gn->y,gn->y);CHKERRQ(ierr); 1397cea06e1SXiang Huang ierr = VecShift(gn->y_work,gn->epsilon*gn->epsilon);CHKERRQ(ierr); 1407cea06e1SXiang Huang ierr = VecCopy(gn->y_work,gn->diag);CHKERRQ(ierr); /* gn->diag = y.^2+epsilon^2 */ 1417cea06e1SXiang Huang ierr = VecSqrtAbs(gn->y_work);CHKERRQ(ierr); /* gn->y_work = sqrt(y.^2+epsilon^2) */ 1427cea06e1SXiang Huang ierr = VecPointwiseMult(gn->diag,gn->y_work,gn->diag);CHKERRQ(ierr);/* gn->diag = sqrt(y.^2+epsilon^2).^3 */ 1438ac80d48SXiang Huang ierr = VecReciprocal(gn->diag);CHKERRQ(ierr); 1448ac80d48SXiang Huang ierr = VecScale(gn->diag,gn->epsilon*gn->epsilon);CHKERRQ(ierr); 145a3c390cfSAlp Dener break; 146a3c390cfSAlp Dener } 147e1e80dc8SAlp Dener PetscFunctionReturn(0); 148e1e80dc8SAlp Dener } 149e1e80dc8SAlp Dener 1508fcddce6SStefano Zampini static PetscErrorCode GNHookFunction(Tao tao,PetscInt iter, void *ctx) 151e1e80dc8SAlp Dener { 1528fcddce6SStefano Zampini TAO_BRGN *gn = (TAO_BRGN *)ctx; 153e1e80dc8SAlp Dener PetscErrorCode ierr; 154e1e80dc8SAlp Dener 155e1e80dc8SAlp Dener PetscFunctionBegin; 156e1e80dc8SAlp Dener /* Update basic tao information from the subsolver */ 157e1e80dc8SAlp Dener gn->parent->nfuncs = tao->nfuncs; 158e1e80dc8SAlp Dener gn->parent->ngrads = tao->ngrads; 159e1e80dc8SAlp Dener gn->parent->nfuncgrads = tao->nfuncgrads; 160e1e80dc8SAlp Dener gn->parent->nhess = tao->nhess; 161e1e80dc8SAlp Dener gn->parent->niter = tao->niter; 162e1e80dc8SAlp Dener gn->parent->ksp_its = tao->ksp_its; 163e1e80dc8SAlp Dener gn->parent->ksp_tot_its = tao->ksp_tot_its; 164e1e80dc8SAlp Dener ierr = TaoGetConvergedReason(tao,&gn->parent->reason);CHKERRQ(ierr); 165e1e80dc8SAlp Dener /* Update the solution vectors */ 166e1e80dc8SAlp Dener if (iter == 0) { 167e1e80dc8SAlp Dener ierr = VecSet(gn->x_old,0.0);CHKERRQ(ierr); 168e1e80dc8SAlp Dener } else { 169e1e80dc8SAlp Dener ierr = VecCopy(tao->solution,gn->x_old);CHKERRQ(ierr); 170e1e80dc8SAlp Dener ierr = VecCopy(tao->solution,gn->parent->solution);CHKERRQ(ierr); 171e1e80dc8SAlp Dener } 172e1e80dc8SAlp Dener /* Update the gradient */ 173e1e80dc8SAlp Dener ierr = VecCopy(tao->gradient,gn->parent->gradient);CHKERRQ(ierr); 174e1e80dc8SAlp Dener /* Call general purpose update function */ 175e1e80dc8SAlp Dener if (gn->parent->ops->update) { 1768fcddce6SStefano Zampini ierr = (*gn->parent->ops->update)(gn->parent,gn->parent->niter,gn->parent->user_update);CHKERRQ(ierr); 177737f463aSAlp Dener } 178737f463aSAlp Dener PetscFunctionReturn(0); 179737f463aSAlp Dener } 180737f463aSAlp Dener 181737f463aSAlp Dener static PetscErrorCode TaoSolve_BRGN(Tao tao) 182737f463aSAlp Dener { 183737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 184737f463aSAlp Dener PetscErrorCode ierr; 185737f463aSAlp Dener 186737f463aSAlp Dener PetscFunctionBegin; 187737f463aSAlp Dener ierr = TaoSolve(gn->subsolver);CHKERRQ(ierr); 188e1e80dc8SAlp Dener /* Update basic tao information from the subsolver */ 189e1e80dc8SAlp Dener tao->nfuncs = gn->subsolver->nfuncs; 190e1e80dc8SAlp Dener tao->ngrads = gn->subsolver->ngrads; 191e1e80dc8SAlp Dener tao->nfuncgrads = gn->subsolver->nfuncgrads; 192e1e80dc8SAlp Dener tao->nhess = gn->subsolver->nhess; 193e1e80dc8SAlp Dener tao->niter = gn->subsolver->niter; 194e1e80dc8SAlp Dener tao->ksp_its = gn->subsolver->ksp_its; 195e1e80dc8SAlp Dener tao->ksp_tot_its = gn->subsolver->ksp_tot_its; 196e1e80dc8SAlp Dener ierr = TaoGetConvergedReason(gn->subsolver,&tao->reason);CHKERRQ(ierr); 197e1e80dc8SAlp Dener /* Update vectors */ 198e1e80dc8SAlp Dener ierr = VecCopy(gn->subsolver->solution,tao->solution);CHKERRQ(ierr); 199e1e80dc8SAlp Dener ierr = VecCopy(gn->subsolver->gradient,tao->gradient);CHKERRQ(ierr); 200737f463aSAlp Dener PetscFunctionReturn(0); 201737f463aSAlp Dener } 202737f463aSAlp Dener 203737f463aSAlp Dener static PetscErrorCode TaoSetFromOptions_BRGN(PetscOptionItems *PetscOptionsObject,Tao tao) 204737f463aSAlp Dener { 205737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 206737f463aSAlp Dener PetscErrorCode ierr; 207737f463aSAlp Dener 208737f463aSAlp Dener PetscFunctionBegin; 209a3c390cfSAlp Dener ierr = PetscOptionsHead(PetscOptionsObject,"least-squares problems with regularizer: ||f(x)||^2 + lambda*g(x), g(x) = ||xk-xkm1||^2 or ||Dx||_1 or user defined function.");CHKERRQ(ierr); 21088fa4459SAlp Dener ierr = PetscOptionsReal("-tao_brgn_regularizer_weight","regularizer weight (default 1e-4)","",gn->lambda,&gn->lambda,NULL);CHKERRQ(ierr); 21188fa4459SAlp Dener ierr = PetscOptionsReal("-tao_brgn_l1_smooth_epsilon","L1-norm smooth approximation parameter: ||x||_1 = sum(sqrt(x.^2+epsilon^2)-epsilon) (default 1e-6)","",gn->epsilon,&gn->epsilon,NULL);CHKERRQ(ierr); 212470ec3f8SXiang Huang ierr = PetscOptionsEList("-tao_brgn_regularization_type","regularization type", "",BRGN_REGULARIZATION_TABLE,BRGN_REGULARIZATION_TYPES,BRGN_REGULARIZATION_TABLE[gn->reg_type],&gn->reg_type,NULL);CHKERRQ(ierr); 213737f463aSAlp Dener ierr = PetscOptionsTail();CHKERRQ(ierr); 214737f463aSAlp Dener ierr = TaoSetFromOptions(gn->subsolver);CHKERRQ(ierr); 215737f463aSAlp Dener PetscFunctionReturn(0); 216737f463aSAlp Dener } 217737f463aSAlp Dener 218737f463aSAlp Dener static PetscErrorCode TaoView_BRGN(Tao tao,PetscViewer viewer) 219737f463aSAlp Dener { 220737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 221737f463aSAlp Dener PetscErrorCode ierr; 222737f463aSAlp Dener 223737f463aSAlp Dener PetscFunctionBegin; 224e1e80dc8SAlp Dener ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr); 225737f463aSAlp Dener ierr = TaoView(gn->subsolver,viewer);CHKERRQ(ierr); 226e1e80dc8SAlp Dener ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr); 227737f463aSAlp Dener PetscFunctionReturn(0); 228737f463aSAlp Dener } 229737f463aSAlp Dener 230737f463aSAlp Dener static PetscErrorCode TaoSetUp_BRGN(Tao tao) 231737f463aSAlp Dener { 232737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 233737f463aSAlp Dener PetscErrorCode ierr; 234737f463aSAlp Dener PetscBool is_bnls,is_bntr,is_bntl; 2358e85b1b3SXiang Huang PetscInt i,n,N,K; /* dict has size K*N*/ 236737f463aSAlp Dener 237737f463aSAlp Dener PetscFunctionBegin; 238737f463aSAlp Dener if (!tao->ls_res) SETERRQ(PetscObjectComm((PetscObject)tao),PETSC_ERR_ORDER,"TaoSetResidualRoutine() must be called before setup!"); 239737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver,TAOBNLS,&is_bnls);CHKERRQ(ierr); 240737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver,TAOBNTR,&is_bntr);CHKERRQ(ierr); 241737f463aSAlp Dener ierr = PetscObjectTypeCompare((PetscObject)gn->subsolver,TAOBNTL,&is_bntl);CHKERRQ(ierr); 242737f463aSAlp Dener if ((is_bnls || is_bntr || is_bntl) && !tao->ls_jac) SETERRQ(PetscObjectComm((PetscObject)tao),PETSC_ERR_ORDER,"TaoSetResidualJacobianRoutine() must be called before setup!"); 243e1e80dc8SAlp Dener if (!tao->gradient) { 244e1e80dc8SAlp Dener ierr = VecDuplicate(tao->solution,&tao->gradient);CHKERRQ(ierr); 245e1e80dc8SAlp Dener } 246737f463aSAlp Dener if (!gn->x_work) { 247737f463aSAlp Dener ierr = VecDuplicate(tao->solution,&gn->x_work);CHKERRQ(ierr); 248737f463aSAlp Dener } 249737f463aSAlp Dener if (!gn->r_work) { 250737f463aSAlp Dener ierr = VecDuplicate(tao->ls_res,&gn->r_work);CHKERRQ(ierr); 251737f463aSAlp Dener } 252e1e80dc8SAlp Dener if (!gn->x_old) { 253e1e80dc8SAlp Dener ierr = VecDuplicate(tao->solution,&gn->x_old);CHKERRQ(ierr); 254e1e80dc8SAlp Dener ierr = VecSet(gn->x_old,0.0);CHKERRQ(ierr); 255e1e80dc8SAlp Dener } 2567cea06e1SXiang Huang 257470ec3f8SXiang Huang if (BRGN_REGULARIZATION_L1DICT == gn->reg_type) { 25830eeff36SXiang Huang if (gn->D) { 25930eeff36SXiang Huang ierr = MatGetSize(gn->D,&K,&N);CHKERRQ(ierr); /* Shell matrices still must have sizes defined. K = N for identity matrix, K=N-1 or N for gradient matrix */ 26030eeff36SXiang Huang } else { 26130eeff36SXiang Huang ierr = VecGetSize(tao->solution,&K);CHKERRQ(ierr); /* If user does not setup dict matrix, use identiy matrix, K=N */ 26230eeff36SXiang Huang } 2637cea06e1SXiang Huang if (!gn->y) { 2647cea06e1SXiang Huang ierr = VecCreate(PETSC_COMM_SELF,&gn->y);CHKERRQ(ierr); 2658e85b1b3SXiang Huang ierr = VecSetSizes(gn->y,PETSC_DECIDE,K);CHKERRQ(ierr); 2667cea06e1SXiang Huang ierr = VecSetFromOptions(gn->y);CHKERRQ(ierr); 2677cea06e1SXiang Huang ierr = VecSet(gn->y,0.0);CHKERRQ(ierr); 2687cea06e1SXiang Huang 2697cea06e1SXiang Huang } 2707cea06e1SXiang Huang if (!gn->y_work) { 2717cea06e1SXiang Huang ierr = VecDuplicate(gn->y,&gn->y_work);CHKERRQ(ierr); 2727cea06e1SXiang Huang } 2738ac80d48SXiang Huang if (!gn->diag) { 2747cea06e1SXiang Huang ierr = VecDuplicate(gn->y,&gn->diag);CHKERRQ(ierr); 2758ac80d48SXiang Huang ierr = VecSet(gn->diag,0.0);CHKERRQ(ierr); 2768ac80d48SXiang Huang } 27730eeff36SXiang Huang } 2780d71dc2bSXiang Huang 279e1e80dc8SAlp Dener if (!tao->setupcalled) { 280737f463aSAlp Dener /* Hessian setup */ 2818e85b1b3SXiang Huang ierr = VecGetLocalSize(tao->solution,&n);CHKERRQ(ierr); 2828e85b1b3SXiang Huang ierr = VecGetSize(tao->solution,&N);CHKERRQ(ierr); 2838e85b1b3SXiang Huang ierr = MatSetSizes(gn->H,n,n,N,N);CHKERRQ(ierr); 284737f463aSAlp Dener ierr = MatSetType(gn->H,MATSHELL);CHKERRQ(ierr); 285737f463aSAlp Dener ierr = MatSetUp(gn->H);CHKERRQ(ierr); 286737f463aSAlp Dener ierr = MatShellSetOperation(gn->H,MATOP_MULT,(void (*)(void))GNHessianProd);CHKERRQ(ierr); 287737f463aSAlp Dener ierr = MatShellSetContext(gn->H,(void*)gn);CHKERRQ(ierr); 2888e85b1b3SXiang Huang /* Subsolver setup,include initial vector and dicttionary D */ 289e1e80dc8SAlp Dener ierr = TaoSetUpdate(gn->subsolver,GNHookFunction,(void*)gn);CHKERRQ(ierr); 290737f463aSAlp Dener ierr = TaoSetInitialVector(gn->subsolver,tao->solution);CHKERRQ(ierr); 291737f463aSAlp Dener if (tao->bounded) { 292737f463aSAlp Dener ierr = TaoSetVariableBounds(gn->subsolver,tao->XL,tao->XU);CHKERRQ(ierr); 293737f463aSAlp Dener } 294737f463aSAlp Dener ierr = TaoSetResidualRoutine(gn->subsolver,tao->ls_res,tao->ops->computeresidual,tao->user_lsresP);CHKERRQ(ierr); 2954ffbe8acSAlp Dener ierr = TaoSetJacobianResidualRoutine(gn->subsolver,tao->ls_jac,tao->ls_jac,tao->ops->computeresidualjacobian,tao->user_lsjacP);CHKERRQ(ierr); 296737f463aSAlp Dener ierr = TaoSetObjectiveAndGradientRoutine(gn->subsolver,GNObjectiveGradientEval,(void*)gn);CHKERRQ(ierr); 297737f463aSAlp Dener ierr = TaoSetHessianRoutine(gn->subsolver,gn->H,gn->H,GNComputeHessian,(void*)gn);CHKERRQ(ierr); 298e1e80dc8SAlp Dener /* Propagate some options down */ 299e1e80dc8SAlp Dener ierr = TaoSetTolerances(gn->subsolver,tao->gatol,tao->grtol,tao->gttol);CHKERRQ(ierr); 300e1e80dc8SAlp Dener ierr = TaoSetMaximumIterations(gn->subsolver,tao->max_it);CHKERRQ(ierr); 301e1e80dc8SAlp Dener ierr = TaoSetMaximumFunctionEvaluations(gn->subsolver,tao->max_funcs);CHKERRQ(ierr); 302737f463aSAlp Dener for (i=0; i<tao->numbermonitors; ++i) { 303737f463aSAlp Dener ierr = TaoSetMonitor(gn->subsolver,tao->monitor[i],tao->monitorcontext[i],tao->monitordestroy[i]);CHKERRQ(ierr); 304737f463aSAlp Dener ierr = PetscObjectReference((PetscObject)(tao->monitorcontext[i]));CHKERRQ(ierr); 305737f463aSAlp Dener } 306737f463aSAlp Dener ierr = TaoSetUp(gn->subsolver);CHKERRQ(ierr); 307e1e80dc8SAlp Dener } 308737f463aSAlp Dener PetscFunctionReturn(0); 309737f463aSAlp Dener } 310737f463aSAlp Dener 311737f463aSAlp Dener static PetscErrorCode TaoDestroy_BRGN(Tao tao) 312737f463aSAlp Dener { 313737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 314737f463aSAlp Dener PetscErrorCode ierr; 315737f463aSAlp Dener 316737f463aSAlp Dener PetscFunctionBegin; 317737f463aSAlp Dener if (tao->setupcalled) { 318e1e80dc8SAlp Dener ierr = VecDestroy(&tao->gradient);CHKERRQ(ierr); 319737f463aSAlp Dener ierr = VecDestroy(&gn->x_work);CHKERRQ(ierr); 320737f463aSAlp Dener ierr = VecDestroy(&gn->r_work);CHKERRQ(ierr); 321e1e80dc8SAlp Dener ierr = VecDestroy(&gn->x_old);CHKERRQ(ierr); 3228ac80d48SXiang Huang ierr = VecDestroy(&gn->diag);CHKERRQ(ierr); 3237cea06e1SXiang Huang ierr = VecDestroy(&gn->y);CHKERRQ(ierr); 3247cea06e1SXiang Huang ierr = VecDestroy(&gn->y_work);CHKERRQ(ierr); 325737f463aSAlp Dener } 326737f463aSAlp Dener ierr = MatDestroy(&gn->H);CHKERRQ(ierr); 3277cea06e1SXiang Huang ierr = MatDestroy(&gn->D);CHKERRQ(ierr); 328463fc0ecSAlp Dener ierr = MatDestroy(&gn->Hreg);CHKERRQ(ierr); 329737f463aSAlp Dener ierr = TaoDestroy(&gn->subsolver);CHKERRQ(ierr); 330e1e80dc8SAlp Dener gn->parent = NULL; 331737f463aSAlp Dener ierr = PetscFree(tao->data);CHKERRQ(ierr); 332737f463aSAlp Dener PetscFunctionReturn(0); 333737f463aSAlp Dener } 334737f463aSAlp Dener 3353850be85SAlp Dener /*MC 3363850be85SAlp Dener TAOBRGN - Bounded Regularized Gauss-Newton method for solving nonlinear least-squares 3373850be85SAlp Dener problems with bound constraints. This algorithm is a thin wrapper around TAOBNTL 338463fc0ecSAlp Dener that constructs the Gauss-Newton problem with the user-provided least-squares 33960bb7533SHansol Suh residual and Jacobian. The algorithm offers an L2-norm ("l2pure"), L2-norm proximal point ("l2prox") 34060bb7533SHansol Suh regularizer, and L1-norm dictionary regularizer ("l1dict"), where we approximate the 34101b716f5SXiang Huang L1-norm ||x||_1 by sum_i(sqrt(x_i^2+epsilon^2)-epsilon) with a small positive number epsilon. 34201b716f5SXiang Huang The user can also provide own regularization function. 3433850be85SAlp Dener 3443850be85SAlp Dener Options Database Keys: 34560bb7533SHansol Suh + -tao_brgn_regularization_type - regularization type ("user", "l2prox", "l2pure", "l1dict") (default "l2prox") 346c061e8e2SXiang Huang . -tao_brgn_regularizer_weight - regularizer weight (default 1e-4) 347c061e8e2SXiang Huang - -tao_brgn_l1_smooth_epsilon - L1-norm smooth approximation parameter: ||x||_1 = sum(sqrt(x.^2+epsilon^2)-epsilon) (default 1e-6) 3483850be85SAlp Dener 3493850be85SAlp Dener Level: beginner 3503850be85SAlp Dener M*/ 351737f463aSAlp Dener PETSC_EXTERN PetscErrorCode TaoCreate_BRGN(Tao tao) 352737f463aSAlp Dener { 353737f463aSAlp Dener TAO_BRGN *gn; 354737f463aSAlp Dener PetscErrorCode ierr; 355737f463aSAlp Dener 356737f463aSAlp Dener PetscFunctionBegin; 357737f463aSAlp Dener ierr = PetscNewLog(tao,&gn);CHKERRQ(ierr); 358737f463aSAlp Dener 359737f463aSAlp Dener tao->ops->destroy = TaoDestroy_BRGN; 360737f463aSAlp Dener tao->ops->setup = TaoSetUp_BRGN; 361737f463aSAlp Dener tao->ops->setfromoptions = TaoSetFromOptions_BRGN; 362737f463aSAlp Dener tao->ops->view = TaoView_BRGN; 363737f463aSAlp Dener tao->ops->solve = TaoSolve_BRGN; 364737f463aSAlp Dener 365737f463aSAlp Dener tao->data = (void*)gn; 366d8bf7057SXiang Huang gn->reg_type = BRGN_REGULARIZATION_L2PROX; 367e1e80dc8SAlp Dener gn->lambda = 1e-4; 3688ac80d48SXiang Huang gn->epsilon = 1e-6; 369e1e80dc8SAlp Dener gn->parent = tao; 370737f463aSAlp Dener 371737f463aSAlp Dener ierr = MatCreate(PetscObjectComm((PetscObject)tao),&gn->H);CHKERRQ(ierr); 372737f463aSAlp Dener ierr = MatSetOptionsPrefix(gn->H,"tao_brgn_hessian_");CHKERRQ(ierr); 373737f463aSAlp Dener 374737f463aSAlp Dener ierr = TaoCreate(PetscObjectComm((PetscObject)tao),&gn->subsolver);CHKERRQ(ierr); 375737f463aSAlp Dener ierr = TaoSetType(gn->subsolver,TAOBNLS);CHKERRQ(ierr); 376737f463aSAlp Dener ierr = TaoSetOptionsPrefix(gn->subsolver,"tao_brgn_subsolver_");CHKERRQ(ierr); 377e1e80dc8SAlp Dener PetscFunctionReturn(0); 378e1e80dc8SAlp Dener } 379e1e80dc8SAlp Dener 380463fc0ecSAlp Dener /*@ 381e1e80dc8SAlp Dener TaoBRGNGetSubsolver - Get the pointer to the subsolver inside BRGN 382e1e80dc8SAlp Dener 383e1e80dc8SAlp Dener Collective on Tao 384e1e80dc8SAlp Dener 385463fc0ecSAlp Dener Level: advanced 386e1e80dc8SAlp Dener 387e1e80dc8SAlp Dener Input Parameters: 388e1e80dc8SAlp Dener + tao - the Tao solver context 389e1e80dc8SAlp Dener - subsolver - the Tao sub-solver context 390e1e80dc8SAlp Dener @*/ 391e1e80dc8SAlp Dener PetscErrorCode TaoBRGNGetSubsolver(Tao tao,Tao *subsolver) 392e1e80dc8SAlp Dener { 393e1e80dc8SAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 394e1e80dc8SAlp Dener 395e1e80dc8SAlp Dener PetscFunctionBegin; 396e1e80dc8SAlp Dener *subsolver = gn->subsolver; 397737f463aSAlp Dener PetscFunctionReturn(0); 398737f463aSAlp Dener } 399737f463aSAlp Dener 400463fc0ecSAlp Dener /*@ 401463fc0ecSAlp Dener TaoBRGNSetRegularizerWeight - Set the regularizer weight for the Gauss-Newton least-squares algorithm 402737f463aSAlp Dener 403737f463aSAlp Dener Collective on Tao 404737f463aSAlp Dener 405737f463aSAlp Dener Input Parameters: 406737f463aSAlp Dener + tao - the Tao solver context 4078e85b1b3SXiang Huang - lambda - L1-norm regularizer weight 408463fc0ecSAlp Dener 409463fc0ecSAlp Dener Level: beginner 410737f463aSAlp Dener @*/ 411a3c390cfSAlp Dener PetscErrorCode TaoBRGNSetRegularizerWeight(Tao tao,PetscReal lambda) 412737f463aSAlp Dener { 413737f463aSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 414737f463aSAlp Dener 4158ac80d48SXiang Huang /* Initialize lambda here */ 4160d71dc2bSXiang Huang 417737f463aSAlp Dener PetscFunctionBegin; 418737f463aSAlp Dener gn->lambda = lambda; 419737f463aSAlp Dener PetscFunctionReturn(0); 420737f463aSAlp Dener } 4210d71dc2bSXiang Huang 422463fc0ecSAlp Dener /*@ 4238ac80d48SXiang Huang TaoBRGNSetL1SmoothEpsilon - Set the L1-norm smooth approximation parameter for L1-regularized least-squares algorithm 4248ac80d48SXiang Huang 4258ac80d48SXiang Huang Collective on Tao 4268ac80d48SXiang Huang 4278ac80d48SXiang Huang Input Parameters: 4288ac80d48SXiang Huang + tao - the Tao solver context 4298ac80d48SXiang Huang - epsilon - L1-norm smooth approximation parameter 430463fc0ecSAlp Dener 431463fc0ecSAlp Dener Level: advanced 4328ac80d48SXiang Huang @*/ 4338ac80d48SXiang Huang PetscErrorCode TaoBRGNSetL1SmoothEpsilon(Tao tao,PetscReal epsilon) 4348ac80d48SXiang Huang { 4358ac80d48SXiang Huang TAO_BRGN *gn = (TAO_BRGN *)tao->data; 4368ac80d48SXiang Huang 4378ac80d48SXiang Huang /* Initialize epsilon here */ 4388ac80d48SXiang Huang 4398ac80d48SXiang Huang PetscFunctionBegin; 4408ac80d48SXiang Huang gn->epsilon = epsilon; 4418ac80d48SXiang Huang PetscFunctionReturn(0); 4428ac80d48SXiang Huang } 4438e85b1b3SXiang Huang 444463fc0ecSAlp Dener /*@ 4458e85b1b3SXiang Huang TaoBRGNSetDictionaryMatrix - bind the dictionary matrix from user application context to gn->D, for compressed sensing (with least-squares problem) 4468e85b1b3SXiang Huang 4478e85b1b3SXiang Huang Input Parameters: 4488e85b1b3SXiang Huang + tao - the Tao context 449a2b725a8SWilliam Gropp - dict - the user specified dictionary matrix. We allow to set a null dictionary, which means identity matrix by default 4508e85b1b3SXiang Huang 451463fc0ecSAlp Dener Level: advanced 4528e85b1b3SXiang Huang @*/ 4538e85b1b3SXiang Huang PetscErrorCode TaoBRGNSetDictionaryMatrix(Tao tao,Mat dict) 4548e85b1b3SXiang Huang { 4558e85b1b3SXiang Huang TAO_BRGN *gn = (TAO_BRGN *)tao->data; 4568e85b1b3SXiang Huang PetscErrorCode ierr; 4578e85b1b3SXiang Huang PetscFunctionBegin; 4588e85b1b3SXiang Huang PetscValidHeaderSpecific(tao,TAO_CLASSID,1); 4598e85b1b3SXiang Huang if (dict) { 4608e85b1b3SXiang Huang PetscValidHeaderSpecific(dict,MAT_CLASSID,2); 461a3c390cfSAlp Dener PetscCheckSameComm(tao,1,dict,2); 4628e85b1b3SXiang Huang ierr = PetscObjectReference((PetscObject)dict);CHKERRQ(ierr); 4638e85b1b3SXiang Huang } 4648e85b1b3SXiang Huang ierr = MatDestroy(&gn->D);CHKERRQ(ierr); 4651fc140a9SXiang Huang gn->D = dict; 4668e85b1b3SXiang Huang PetscFunctionReturn(0); 4678e85b1b3SXiang Huang } 4688e85b1b3SXiang Huang 469a3c390cfSAlp Dener /*@C 470463fc0ecSAlp Dener TaoBRGNSetRegularizerObjectiveAndGradientRoutine - Sets the user-defined regularizer call-back 471463fc0ecSAlp Dener function into the algorithm. 472463fc0ecSAlp Dener 473463fc0ecSAlp Dener Input Parameters: 474463fc0ecSAlp Dener + tao - the Tao context 475463fc0ecSAlp Dener . func - function pointer for the regularizer value and gradient evaluation 476463fc0ecSAlp Dener - ctx - user context for the regularizer 477463fc0ecSAlp Dener 478463fc0ecSAlp Dener Level: advanced 479a3c390cfSAlp Dener @*/ 480a3c390cfSAlp Dener PetscErrorCode TaoBRGNSetRegularizerObjectiveAndGradientRoutine(Tao tao,PetscErrorCode (*func)(Tao,Vec,PetscReal *,Vec,void*),void *ctx) 481a3c390cfSAlp Dener { 482a3c390cfSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 483a3c390cfSAlp Dener 484a3c390cfSAlp Dener PetscFunctionBegin; 485a3c390cfSAlp Dener PetscValidHeaderSpecific(tao,TAO_CLASSID,1); 486a3c390cfSAlp Dener if (ctx) { 487a3c390cfSAlp Dener gn->reg_obj_ctx = ctx; 488a3c390cfSAlp Dener } 489a3c390cfSAlp Dener if (func) { 490a3c390cfSAlp Dener gn->regularizerobjandgrad = func; 491a3c390cfSAlp Dener } 492a3c390cfSAlp Dener PetscFunctionReturn(0); 493a3c390cfSAlp Dener } 494a3c390cfSAlp Dener 495a3c390cfSAlp Dener /*@C 496463fc0ecSAlp Dener TaoBRGNSetRegularizerHessianRoutine - Sets the user-defined regularizer call-back 497463fc0ecSAlp Dener function into the algorithm. 498463fc0ecSAlp Dener 499463fc0ecSAlp Dener Input Parameters: 500463fc0ecSAlp Dener + tao - the Tao context 501463fc0ecSAlp Dener . Hreg - user-created matrix for the Hessian of the regularization term 502463fc0ecSAlp Dener . func - function pointer for the regularizer Hessian evaluation 503463fc0ecSAlp Dener - ctx - user context for the regularizer Hessian 504463fc0ecSAlp Dener 505463fc0ecSAlp Dener Level: advanced 506a3c390cfSAlp Dener @*/ 507a3c390cfSAlp Dener PetscErrorCode TaoBRGNSetRegularizerHessianRoutine(Tao tao,Mat Hreg,PetscErrorCode (*func)(Tao,Vec,Mat,void*),void *ctx) 508a3c390cfSAlp Dener { 509a3c390cfSAlp Dener TAO_BRGN *gn = (TAO_BRGN *)tao->data; 510a3c390cfSAlp Dener PetscErrorCode ierr; 511a3c390cfSAlp Dener 512a3c390cfSAlp Dener PetscFunctionBegin; 513a3c390cfSAlp Dener PetscValidHeaderSpecific(tao,TAO_CLASSID,1); 514a3c390cfSAlp Dener if (Hreg) { 515a3c390cfSAlp Dener PetscValidHeaderSpecific(Hreg,MAT_CLASSID,2); 516a3c390cfSAlp Dener PetscCheckSameComm(tao,1,Hreg,2); 51701b716f5SXiang Huang } else SETERRQ(PetscObjectComm((PetscObject)tao),PETSC_ERR_ARG_WRONG,"NULL Hessian detected! User must provide valid Hessian for the regularizer."); 518a3c390cfSAlp Dener if (ctx) { 519a3c390cfSAlp Dener gn->reg_hess_ctx = ctx; 520a3c390cfSAlp Dener } 521a3c390cfSAlp Dener if (func) { 522a3c390cfSAlp Dener gn->regularizerhessian = func; 523a3c390cfSAlp Dener } 524a3c390cfSAlp Dener if (Hreg) { 525a3c390cfSAlp Dener ierr = PetscObjectReference((PetscObject)Hreg);CHKERRQ(ierr); 526a3c390cfSAlp Dener ierr = MatDestroy(&gn->Hreg);CHKERRQ(ierr); 527a3c390cfSAlp Dener gn->Hreg = Hreg; 528a3c390cfSAlp Dener } 529a3c390cfSAlp Dener PetscFunctionReturn(0); 530a3c390cfSAlp Dener } 5319275ad16SHansol Suh 532