xref: /petsc/src/tao/tutorials/ex2.c (revision 327415f76d85372a4417cf1aaa14db707d4d6c04)
1c4762a1bSJed Brown static char help[] = "One-Shot Multigrid for Parameter Estimation Problem for the Poisson Equation.\n\
2c4762a1bSJed Brown Using the Interior Point Method.\n\n\n";
3c4762a1bSJed Brown 
4c4762a1bSJed Brown /*F
5c4762a1bSJed Brown   We are solving the parameter estimation problem for the Laplacian. We will ask to minimize a Lagrangian
6c4762a1bSJed Brown function over $y$ and $u$, given by
7c4762a1bSJed Brown \begin{align}
8c4762a1bSJed Brown   L(u, a, \lambda) = \frac{1}{2} || Qu - d_A ||^2 || Qu - d_B ||^2 + \frac{\beta}{2} || L (a - a_r) ||^2 + \lambda F(u; a)
9c4762a1bSJed Brown \end{align}
10c4762a1bSJed Brown where $Q$ is a sampling operator, $L$ is a regularization operator, $F$ defines the PDE.
11c4762a1bSJed Brown 
12c4762a1bSJed Brown Currently, we have perfect information, meaning $Q = I$, and then we need no regularization, $L = I$. We
13c4762a1bSJed Brown also give the null vector for the reference control $a_r$. Right now $\beta = 1$.
14c4762a1bSJed Brown 
15c4762a1bSJed Brown The PDE will be the Laplace equation with homogeneous boundary conditions
16c4762a1bSJed Brown \begin{align}
17c4762a1bSJed Brown   -Delta u = a
18c4762a1bSJed Brown \end{align}
19c4762a1bSJed Brown 
20c4762a1bSJed Brown F*/
21c4762a1bSJed Brown 
22c4762a1bSJed Brown #include <petsc.h>
23c4762a1bSJed Brown #include <petscfe.h>
24c4762a1bSJed Brown 
25c4762a1bSJed Brown typedef enum {RUN_FULL, RUN_TEST} RunType;
26c4762a1bSJed Brown 
27c4762a1bSJed Brown typedef struct {
28c4762a1bSJed Brown   RunType   runType;        /* Whether to run tests, or solve the full problem */
29c4762a1bSJed Brown   PetscBool useDualPenalty; /* Penalize deviation from both goals */
30c4762a1bSJed Brown } AppCtx;
31c4762a1bSJed Brown 
32c4762a1bSJed Brown static PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)
33c4762a1bSJed Brown {
34c4762a1bSJed Brown   const char    *runTypes[2] = {"full", "test"};
35c4762a1bSJed Brown   PetscInt       run;
36c4762a1bSJed Brown 
37c4762a1bSJed Brown   PetscFunctionBeginUser;
38c4762a1bSJed Brown   options->runType        = RUN_FULL;
39c4762a1bSJed Brown   options->useDualPenalty = PETSC_FALSE;
40d0609cedSBarry Smith   PetscOptionsBegin(comm, "", "Inverse Problem Options", "DMPLEX");
41c4762a1bSJed Brown   run  = options->runType;
429566063dSJacob Faibussowitsch   PetscCall(PetscOptionsEList("-run_type", "The run type", "ex2.c", runTypes, 2, runTypes[options->runType], &run, NULL));
43c4762a1bSJed Brown   options->runType = (RunType) run;
449566063dSJacob Faibussowitsch   PetscCall(PetscOptionsBool("-use_dual_penalty", "Penalize deviation from both goals", "ex2.c", options->useDualPenalty, &options->useDualPenalty, NULL));
45d0609cedSBarry Smith   PetscOptionsEnd();
46c4762a1bSJed Brown   PetscFunctionReturn(0);
47c4762a1bSJed Brown }
48c4762a1bSJed Brown 
49c4762a1bSJed Brown static PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)
50c4762a1bSJed Brown {
51c4762a1bSJed Brown   PetscFunctionBeginUser;
529566063dSJacob Faibussowitsch   PetscCall(DMCreate(comm, dm));
539566063dSJacob Faibussowitsch   PetscCall(DMSetType(*dm, DMPLEX));
549566063dSJacob Faibussowitsch   PetscCall(DMSetFromOptions(*dm));
559566063dSJacob Faibussowitsch   PetscCall(DMViewFromOptions(*dm, NULL, "-dm_view"));
56c4762a1bSJed Brown   PetscFunctionReturn(0);
57c4762a1bSJed Brown }
58c4762a1bSJed Brown 
59c4762a1bSJed Brown void f0_u(PetscInt dim, PetscInt Nf, PetscInt NfAux,
60c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
61c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
62c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[])
63c4762a1bSJed Brown {
64c4762a1bSJed Brown   f0[0] = (u[0] - (x[0]*x[0] + x[1]*x[1]));
65c4762a1bSJed Brown }
66c4762a1bSJed Brown void f0_u_full(PetscInt dim, PetscInt Nf, PetscInt NfAux,
67c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
68c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
69c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[])
70c4762a1bSJed Brown {
71c4762a1bSJed Brown   f0[0] = (u[0] - (x[0]*x[0] + x[1]*x[1]))*PetscSqr(u[0] - (sin(2.0*PETSC_PI*x[0]) * sin(2.0*PETSC_PI*x[1]))) +
72c4762a1bSJed Brown     PetscSqr(u[0] - (x[0]*x[0] + x[1]*x[1]))*(u[0] - (sin(2.0*PETSC_PI*x[0]) * sin(2.0*PETSC_PI*x[1])));
73c4762a1bSJed Brown }
74c4762a1bSJed Brown void f1_u(PetscInt dim, PetscInt Nf, PetscInt NfAux,
75c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
76c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
77c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f1[])
78c4762a1bSJed Brown {
79c4762a1bSJed Brown   PetscInt d;
80c4762a1bSJed Brown   for (d = 0; d < dim; ++d) f1[d] = u_x[dim*2+d];
81c4762a1bSJed Brown }
82c4762a1bSJed Brown void g0_uu(PetscInt dim, PetscInt Nf, PetscInt NfAux,
83c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
84c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
85c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[])
86c4762a1bSJed Brown {
87c4762a1bSJed Brown   g0[0] = 1.0;
88c4762a1bSJed Brown }
89c4762a1bSJed Brown void g0_uu_full(PetscInt dim, PetscInt Nf, PetscInt NfAux,
90c4762a1bSJed Brown                 const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
91c4762a1bSJed Brown                 const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
92c4762a1bSJed Brown                 PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[])
93c4762a1bSJed Brown {
94c4762a1bSJed Brown   g0[0] = PetscSqr(u[0] - sin(2.0*PETSC_PI*x[0]) * sin(2.0*PETSC_PI*x[1]))
95c4762a1bSJed Brown     + PetscSqr(u[0] - (x[0]*x[0] + x[1]*x[1]))
96c4762a1bSJed Brown     - 2.0*((x[0]*x[0] + x[1]*x[1]) + (sin(2.0*PETSC_PI*x[0]) * sin(2.0*PETSC_PI*x[1])))*u[0]
97c4762a1bSJed Brown     + 4.0*(x[0]*x[0] + x[1]*x[1])*(sin(2.0*PETSC_PI*x[0]) * sin(2.0*PETSC_PI*x[1]));
98c4762a1bSJed Brown }
99c4762a1bSJed Brown void g3_ul(PetscInt dim, PetscInt Nf, PetscInt NfAux,
100c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
101c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
102c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g3[])
103c4762a1bSJed Brown {
104c4762a1bSJed Brown   PetscInt d;
105c4762a1bSJed Brown   for (d = 0; d < dim; ++d) g3[d*dim+d] = 1.0;
106c4762a1bSJed Brown }
107c4762a1bSJed Brown 
108c4762a1bSJed Brown void f0_a(PetscInt dim, PetscInt Nf, PetscInt NfAux,
109c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
110c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
111c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[])
112c4762a1bSJed Brown {
113c4762a1bSJed Brown   f0[0] = u[1] - 4.0 /* 0.0 */ + u[2];
114c4762a1bSJed Brown }
115c4762a1bSJed Brown void g0_aa(PetscInt dim, PetscInt Nf, PetscInt NfAux,
116c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
117c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
118c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[])
119c4762a1bSJed Brown {
120c4762a1bSJed Brown   g0[0] = 1.0;
121c4762a1bSJed Brown }
122c4762a1bSJed Brown void g0_al(PetscInt dim, PetscInt Nf, PetscInt NfAux,
123c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
124c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
125c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[])
126c4762a1bSJed Brown {
127c4762a1bSJed Brown   g0[0] = 1.0;
128c4762a1bSJed Brown }
129c4762a1bSJed Brown 
130c4762a1bSJed Brown void f0_l(PetscInt dim, PetscInt Nf, PetscInt NfAux,
131c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
132c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
133c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f0[])
134c4762a1bSJed Brown {
135c4762a1bSJed Brown   f0[0] = u[1];
136c4762a1bSJed Brown }
137c4762a1bSJed Brown void f1_l(PetscInt dim, PetscInt Nf, PetscInt NfAux,
138c4762a1bSJed Brown           const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
139c4762a1bSJed Brown           const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
140c4762a1bSJed Brown           PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar f1[])
141c4762a1bSJed Brown {
142c4762a1bSJed Brown   PetscInt d;
143c4762a1bSJed Brown   for (d = 0; d < dim; ++d) f1[d] = u_x[d];
144c4762a1bSJed Brown }
145c4762a1bSJed Brown void g0_la(PetscInt dim, PetscInt Nf, PetscInt NfAux,
146c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
147c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
148c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g0[])
149c4762a1bSJed Brown {
150c4762a1bSJed Brown   g0[0] = 1.0;
151c4762a1bSJed Brown }
152c4762a1bSJed Brown void g3_lu(PetscInt dim, PetscInt Nf, PetscInt NfAux,
153c4762a1bSJed Brown            const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[],
154c4762a1bSJed Brown            const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[],
155c4762a1bSJed Brown            PetscReal t, PetscReal u_tShift, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar g3[])
156c4762a1bSJed Brown {
157c4762a1bSJed Brown   PetscInt d;
158c4762a1bSJed Brown   for (d = 0; d < dim; ++d) g3[d*dim+d] = 1.0;
159c4762a1bSJed Brown }
160c4762a1bSJed Brown 
161c4762a1bSJed Brown /*
162c4762a1bSJed Brown   In 2D for Dirichlet conditions with a variable coefficient, we use exact solution:
163c4762a1bSJed Brown 
164c4762a1bSJed Brown     u   = x^2 + y^2
165c4762a1bSJed Brown     a   = 4
166c4762a1bSJed Brown     d_A = 4
167c4762a1bSJed Brown     d_B = sin(2*pi*x[0]) * sin(2*pi*x[1])
168c4762a1bSJed Brown 
169c4762a1bSJed Brown   so that
170c4762a1bSJed Brown 
171c4762a1bSJed Brown     -\Delta u + a = -4 + 4 = 0
172c4762a1bSJed Brown */
173c4762a1bSJed Brown PetscErrorCode quadratic_u_2d(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx)
174c4762a1bSJed Brown {
175c4762a1bSJed Brown   *u = x[0]*x[0] + x[1]*x[1];
176c4762a1bSJed Brown   return 0;
177c4762a1bSJed Brown }
178c4762a1bSJed Brown PetscErrorCode constant_a_2d(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *a, void *ctx)
179c4762a1bSJed Brown {
180c4762a1bSJed Brown   *a = 4;
181c4762a1bSJed Brown   return 0;
182c4762a1bSJed Brown }
183c4762a1bSJed Brown PetscErrorCode zero(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *l, void *ctx)
184c4762a1bSJed Brown {
185c4762a1bSJed Brown   *l = 0.0;
186c4762a1bSJed Brown   return 0;
187c4762a1bSJed Brown }
188c4762a1bSJed Brown 
189c4762a1bSJed Brown PetscErrorCode SetupProblem(DM dm, AppCtx *user)
190c4762a1bSJed Brown {
19145480ffeSMatthew G. Knepley   PetscDS        ds;
19245480ffeSMatthew G. Knepley   DMLabel        label;
193c4762a1bSJed Brown   const PetscInt id = 1;
194c4762a1bSJed Brown 
195c4762a1bSJed Brown   PetscFunctionBeginUser;
1969566063dSJacob Faibussowitsch   PetscCall(DMGetDS(dm, &ds));
1979566063dSJacob Faibussowitsch   PetscCall(PetscDSSetResidual(ds, 0, user->useDualPenalty == PETSC_TRUE ? f0_u_full : f0_u, f1_u));
1989566063dSJacob Faibussowitsch   PetscCall(PetscDSSetResidual(ds, 1, f0_a, NULL));
1999566063dSJacob Faibussowitsch   PetscCall(PetscDSSetResidual(ds, 2, f0_l, f1_l));
2009566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 0, 0, user->useDualPenalty == PETSC_TRUE ? g0_uu_full : g0_uu, NULL, NULL, NULL));
2019566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 0, 2, NULL, NULL, NULL, g3_ul));
2029566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 1, 1, g0_aa, NULL, NULL, NULL));
2039566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 1, 2, g0_al, NULL, NULL, NULL));
2049566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 2, 1, g0_la, NULL, NULL, NULL));
2059566063dSJacob Faibussowitsch   PetscCall(PetscDSSetJacobian(ds, 2, 0, NULL, NULL, NULL, g3_lu));
206c4762a1bSJed Brown 
2079566063dSJacob Faibussowitsch   PetscCall(PetscDSSetExactSolution(ds, 0, quadratic_u_2d, NULL));
2089566063dSJacob Faibussowitsch   PetscCall(PetscDSSetExactSolution(ds, 1, constant_a_2d, NULL));
2099566063dSJacob Faibussowitsch   PetscCall(PetscDSSetExactSolution(ds, 2, zero, NULL));
2109566063dSJacob Faibussowitsch   PetscCall(DMGetLabel(dm, "marker", &label));
2119566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_ESSENTIAL, "wall", label, 1, &id, 0, 0, NULL, (void (*)()) quadratic_u_2d, NULL, user, NULL));
2129566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_ESSENTIAL, "wall", label, 1, &id, 1, 0, NULL, (void (*)()) constant_a_2d, NULL, user, NULL));
2139566063dSJacob Faibussowitsch   PetscCall(DMAddBoundary(dm, DM_BC_ESSENTIAL, "wall", label, 1, &id, 2, 0, NULL, (void (*)()) zero, NULL, user, NULL));
214c4762a1bSJed Brown   PetscFunctionReturn(0);
215c4762a1bSJed Brown }
216c4762a1bSJed Brown 
217c4762a1bSJed Brown PetscErrorCode SetupDiscretization(DM dm, AppCtx *user)
218c4762a1bSJed Brown {
219c4762a1bSJed Brown   DM              cdm = dm;
220c4762a1bSJed Brown   const PetscInt  dim = 2;
221c4762a1bSJed Brown   PetscFE         fe[3];
222c4762a1bSJed Brown   PetscInt        f;
223c4762a1bSJed Brown   MPI_Comm        comm;
224c4762a1bSJed Brown 
225c4762a1bSJed Brown   PetscFunctionBeginUser;
226c4762a1bSJed Brown   /* Create finite element */
2279566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject) dm, &comm));
2289566063dSJacob Faibussowitsch   PetscCall(PetscFECreateDefault(comm, dim, 1, PETSC_TRUE, "potential_", -1, &fe[0]));
2299566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject) fe[0], "potential"));
2309566063dSJacob Faibussowitsch   PetscCall(PetscFECreateDefault(comm, dim, 1, PETSC_TRUE, "charge_", -1, &fe[1]));
2319566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject) fe[1], "charge"));
2329566063dSJacob Faibussowitsch   PetscCall(PetscFECopyQuadrature(fe[0], fe[1]));
2339566063dSJacob Faibussowitsch   PetscCall(PetscFECreateDefault(comm, dim, 1, PETSC_TRUE, "multiplier_", -1, &fe[2]));
2349566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject) fe[2], "multiplier"));
2359566063dSJacob Faibussowitsch   PetscCall(PetscFECopyQuadrature(fe[0], fe[2]));
236c4762a1bSJed Brown   /* Set discretization and boundary conditions for each mesh */
2379566063dSJacob Faibussowitsch   for (f = 0; f < 3; ++f) PetscCall(DMSetField(dm, f, NULL, (PetscObject) fe[f]));
2389566063dSJacob Faibussowitsch   PetscCall(DMCreateDS(cdm));
2399566063dSJacob Faibussowitsch   PetscCall(SetupProblem(dm, user));
240c4762a1bSJed Brown   while (cdm) {
2419566063dSJacob Faibussowitsch     PetscCall(DMCopyDisc(dm, cdm));
2429566063dSJacob Faibussowitsch     PetscCall(DMGetCoarseDM(cdm, &cdm));
243c4762a1bSJed Brown   }
2449566063dSJacob Faibussowitsch   for (f = 0; f < 3; ++f) PetscCall(PetscFEDestroy(&fe[f]));
245c4762a1bSJed Brown   PetscFunctionReturn(0);
246c4762a1bSJed Brown }
247c4762a1bSJed Brown 
248c4762a1bSJed Brown int main(int argc, char **argv)
249c4762a1bSJed Brown {
250c4762a1bSJed Brown   DM             dm;
251c4762a1bSJed Brown   SNES           snes;
252c4762a1bSJed Brown   Vec            u, r;
253c4762a1bSJed Brown   AppCtx         user;
254c4762a1bSJed Brown 
255*327415f7SBarry Smith   PetscFunctionBeginUser;
2569566063dSJacob Faibussowitsch   PetscCall(PetscInitialize(&argc, &argv, NULL,help));
2579566063dSJacob Faibussowitsch   PetscCall(ProcessOptions(PETSC_COMM_WORLD, &user));
2589566063dSJacob Faibussowitsch   PetscCall(SNESCreate(PETSC_COMM_WORLD, &snes));
2599566063dSJacob Faibussowitsch   PetscCall(CreateMesh(PETSC_COMM_WORLD, &user, &dm));
2609566063dSJacob Faibussowitsch   PetscCall(SNESSetDM(snes, dm));
2619566063dSJacob Faibussowitsch   PetscCall(SetupDiscretization(dm, &user));
262c4762a1bSJed Brown 
2639566063dSJacob Faibussowitsch   PetscCall(DMCreateGlobalVector(dm, &u));
2649566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject) u, "solution"));
2659566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &r));
2669566063dSJacob Faibussowitsch   PetscCall(DMPlexSetSNESLocalFEM(dm,&user,&user,&user));
2679566063dSJacob Faibussowitsch   PetscCall(SNESSetFromOptions(snes));
268c4762a1bSJed Brown 
2699566063dSJacob Faibussowitsch   PetscCall(DMSNESCheckFromOptions(snes, u));
270c4762a1bSJed Brown   if (user.runType == RUN_FULL) {
271348a1646SMatthew G. Knepley     PetscDS          ds;
272348a1646SMatthew G. Knepley     PetscErrorCode (*exactFuncs[3])(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx);
273c4762a1bSJed Brown     PetscErrorCode (*initialGuess[3])(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar u[], void *ctx);
274c4762a1bSJed Brown     PetscReal        error;
275c4762a1bSJed Brown 
2769566063dSJacob Faibussowitsch     PetscCall(DMGetDS(dm, &ds));
2779566063dSJacob Faibussowitsch     PetscCall(PetscDSGetExactSolution(ds, 0, &exactFuncs[0], NULL));
2789566063dSJacob Faibussowitsch     PetscCall(PetscDSGetExactSolution(ds, 1, &exactFuncs[1], NULL));
2799566063dSJacob Faibussowitsch     PetscCall(PetscDSGetExactSolution(ds, 2, &exactFuncs[2], NULL));
280c4762a1bSJed Brown     initialGuess[0] = zero;
281c4762a1bSJed Brown     initialGuess[1] = zero;
282c4762a1bSJed Brown     initialGuess[2] = zero;
2839566063dSJacob Faibussowitsch     PetscCall(DMProjectFunction(dm, 0.0, initialGuess, NULL, INSERT_VALUES, u));
2849566063dSJacob Faibussowitsch     PetscCall(VecViewFromOptions(u, NULL, "-initial_vec_view"));
2859566063dSJacob Faibussowitsch     PetscCall(DMComputeL2Diff(dm, 0.0, exactFuncs, NULL, u, &error));
2869566063dSJacob Faibussowitsch     if (error < 1.0e-11) PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Initial L_2 Error: < 1.0e-11\n"));
28763a3b9bcSJacob Faibussowitsch     else                 PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Initial L_2 Error: %g\n", (double)error));
2889566063dSJacob Faibussowitsch     PetscCall(SNESSolve(snes, NULL, u));
2899566063dSJacob Faibussowitsch     PetscCall(DMComputeL2Diff(dm, 0.0, exactFuncs, NULL, u, &error));
2909566063dSJacob Faibussowitsch     if (error < 1.0e-11) PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Final L_2 Error: < 1.0e-11\n"));
29163a3b9bcSJacob Faibussowitsch     else                 PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Final L_2 Error: %g\n", (double)error));
292c4762a1bSJed Brown   }
2939566063dSJacob Faibussowitsch   PetscCall(VecViewFromOptions(u, NULL, "-sol_vec_view"));
294c4762a1bSJed Brown 
2959566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&u));
2969566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&r));
2979566063dSJacob Faibussowitsch   PetscCall(SNESDestroy(&snes));
2989566063dSJacob Faibussowitsch   PetscCall(DMDestroy(&dm));
2999566063dSJacob Faibussowitsch   PetscCall(PetscFinalize());
300b122ec5aSJacob Faibussowitsch   return 0;
301c4762a1bSJed Brown }
302c4762a1bSJed Brown 
303c4762a1bSJed Brown /*TEST
304c4762a1bSJed Brown 
305c4762a1bSJed Brown   build:
306c4762a1bSJed Brown     requires: !complex triangle
307c4762a1bSJed Brown 
308c4762a1bSJed Brown   test:
309c4762a1bSJed Brown     suffix: 0
310c4762a1bSJed Brown     args: -run_type test -dmsnes_check -potential_petscspace_degree 2 -charge_petscspace_degree 1 -multiplier_petscspace_degree 1
311c4762a1bSJed Brown 
312c4762a1bSJed Brown   test:
313c4762a1bSJed Brown     suffix: 1
314c4762a1bSJed Brown     args: -potential_petscspace_degree 2 -charge_petscspace_degree 1 -multiplier_petscspace_degree 1 -snes_monitor -snes_converged_reason -pc_type fieldsplit -pc_fieldsplit_0_fields 0,1 -pc_fieldsplit_1_fields 2 -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full -pc_fieldsplit_schur_precondition selfp -fieldsplit_0_pc_type lu -sol_vec_view
315c4762a1bSJed Brown 
316c4762a1bSJed Brown   test:
317c4762a1bSJed Brown     suffix: 2
318c4762a1bSJed Brown     args: -potential_petscspace_degree 2 -charge_petscspace_degree 1 -multiplier_petscspace_degree 1 -snes_monitor -snes_converged_reason -snes_fd -pc_type fieldsplit -pc_fieldsplit_0_fields 0,1 -pc_fieldsplit_1_fields 2 -pc_fieldsplit_type schur -pc_fieldsplit_schur_factorization_type full -pc_fieldsplit_schur_precondition selfp -fieldsplit_0_pc_type lu -sol_vec_view
319c4762a1bSJed Brown 
320c4762a1bSJed Brown TEST*/
321