1c4762a1bSJed Brown /* Program usage: mpiexec -n <proc> eptorsion2 [-help] [all TAO options] */ 2c4762a1bSJed Brown 3c4762a1bSJed Brown /* ---------------------------------------------------------------------- 4c4762a1bSJed Brown 5c4762a1bSJed Brown Elastic-plastic torsion problem. 6c4762a1bSJed Brown 7c4762a1bSJed Brown The elastic plastic torsion problem arises from the determination 8c4762a1bSJed Brown of the stress field on an infinitely long cylindrical bar, which is 9c4762a1bSJed Brown equivalent to the solution of the following problem: 10c4762a1bSJed Brown 11c4762a1bSJed Brown min{ .5 * integral(||gradient(v(x))||^2 dx) - C * integral(v(x) dx)} 12c4762a1bSJed Brown 13c4762a1bSJed Brown where C is the torsion angle per unit length. 14c4762a1bSJed Brown 15c4762a1bSJed Brown The uniprocessor version of this code is eptorsion1.c; the Fortran 16c4762a1bSJed Brown version of this code is eptorsion2f.F. 17c4762a1bSJed Brown 18c4762a1bSJed Brown This application solves the problem without calculating hessians 19c4762a1bSJed Brown ---------------------------------------------------------------------- */ 20c4762a1bSJed Brown 21c4762a1bSJed Brown /* 22c4762a1bSJed Brown Include "petsctao.h" so that we can use TAO solvers. Note that this 23c4762a1bSJed Brown file automatically includes files for lower-level support, such as those 24c4762a1bSJed Brown provided by the PETSc library: 25c4762a1bSJed Brown petsc.h - base PETSc routines petscvec.h - vectors 26a5b23f4aSJose E. Roman petscsys.h - system routines petscmat.h - matrices 27c4762a1bSJed Brown petscis.h - index sets petscksp.h - Krylov subspace methods 28c4762a1bSJed Brown petscviewer.h - viewers petscpc.h - preconditioners 29c4762a1bSJed Brown Include "petscdmda.h" so that we can use distributed arrays (DMs) for managing 30c4762a1bSJed Brown the parallel mesh. 31c4762a1bSJed Brown */ 32c4762a1bSJed Brown 33c4762a1bSJed Brown #include <petsctao.h> 34c4762a1bSJed Brown #include <petscdmda.h> 35c4762a1bSJed Brown 36*9371c9d4SSatish Balay static char help[] = "Demonstrates use of the TAO package to solve \n\ 37c4762a1bSJed Brown unconstrained minimization problems in parallel. This example is based on \n\ 38c4762a1bSJed Brown the Elastic-Plastic Torsion (dept) problem from the MINPACK-2 test suite.\n\ 39c4762a1bSJed Brown The command line options are:\n\ 40c4762a1bSJed Brown -mx <xg>, where <xg> = number of grid points in the 1st coordinate direction\n\ 41c4762a1bSJed Brown -my <yg>, where <yg> = number of grid points in the 2nd coordinate direction\n\ 42c4762a1bSJed Brown -par <param>, where <param> = angle of twist per unit length\n\n"; 43c4762a1bSJed Brown 44c4762a1bSJed Brown /* 45c4762a1bSJed Brown User-defined application context - contains data needed by the 46c4762a1bSJed Brown application-provided call-back routines, FormFunction() and 47c4762a1bSJed Brown FormGradient(). 48c4762a1bSJed Brown */ 49c4762a1bSJed Brown typedef struct { 50c4762a1bSJed Brown /* parameters */ 51c4762a1bSJed Brown PetscInt mx, my; /* global discretization in x- and y-directions */ 52c4762a1bSJed Brown PetscReal param; /* nonlinearity parameter */ 53c4762a1bSJed Brown 54c4762a1bSJed Brown /* work space */ 55c4762a1bSJed Brown Vec localX; /* local vectors */ 56c4762a1bSJed Brown DM dm; /* distributed array data structure */ 57c4762a1bSJed Brown } AppCtx; 58c4762a1bSJed Brown 59c4762a1bSJed Brown PetscErrorCode FormInitialGuess(AppCtx *, Vec); 60c4762a1bSJed Brown PetscErrorCode FormFunctionGradient(Tao, Vec, PetscReal *, Vec, void *); 61c4762a1bSJed Brown PetscErrorCode FormHessian(Tao, Vec, Mat, Mat, void *); 62c4762a1bSJed Brown 63*9371c9d4SSatish Balay int main(int argc, char **argv) { 64c4762a1bSJed Brown Vec x; 65c4762a1bSJed Brown Mat H; 66c4762a1bSJed Brown PetscInt Nx, Ny; 67c4762a1bSJed Brown Tao tao; 68c4762a1bSJed Brown PetscBool flg; 69c4762a1bSJed Brown KSP ksp; 70c4762a1bSJed Brown PC pc; 71c4762a1bSJed Brown AppCtx user; 72c4762a1bSJed Brown 73c4762a1bSJed Brown PetscInitialize(&argc, &argv, (char *)0, help); 74c4762a1bSJed Brown 75c4762a1bSJed Brown /* Specify default dimension of the problem */ 76*9371c9d4SSatish Balay user.param = 5.0; 77*9371c9d4SSatish Balay user.mx = 10; 78*9371c9d4SSatish Balay user.my = 10; 79c4762a1bSJed Brown Nx = Ny = PETSC_DECIDE; 80c4762a1bSJed Brown 81c4762a1bSJed Brown /* Check for any command line arguments that override defaults */ 829566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetReal(NULL, NULL, "-par", &user.param, &flg)); 839566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-my", &user.my, &flg)); 849566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetInt(NULL, NULL, "-mx", &user.mx, &flg)); 85c4762a1bSJed Brown 869566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\n---- Elastic-Plastic Torsion Problem -----\n")); 8763a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "mx: %" PetscInt_FMT " my: %" PetscInt_FMT " \n\n", user.mx, user.my)); 88c4762a1bSJed Brown 89c4762a1bSJed Brown /* Set up distributed array */ 909566063dSJacob Faibussowitsch PetscCall(DMDACreate2d(PETSC_COMM_WORLD, DM_BOUNDARY_NONE, DM_BOUNDARY_NONE, DMDA_STENCIL_STAR, user.mx, user.my, Nx, Ny, 1, 1, NULL, NULL, &user.dm)); 919566063dSJacob Faibussowitsch PetscCall(DMSetFromOptions(user.dm)); 929566063dSJacob Faibussowitsch PetscCall(DMSetUp(user.dm)); 93c4762a1bSJed Brown 94c4762a1bSJed Brown /* Create vectors */ 959566063dSJacob Faibussowitsch PetscCall(DMCreateGlobalVector(user.dm, &x)); 96c4762a1bSJed Brown 979566063dSJacob Faibussowitsch PetscCall(DMCreateLocalVector(user.dm, &user.localX)); 98c4762a1bSJed Brown 99c4762a1bSJed Brown /* Create Hessian */ 1009566063dSJacob Faibussowitsch PetscCall(DMCreateMatrix(user.dm, &H)); 1019566063dSJacob Faibussowitsch PetscCall(MatSetOption(H, MAT_SYMMETRIC, PETSC_TRUE)); 102c4762a1bSJed Brown 103c4762a1bSJed Brown /* The TAO code begins here */ 104c4762a1bSJed Brown 105c4762a1bSJed Brown /* Create TAO solver and set desired solution method */ 1069566063dSJacob Faibussowitsch PetscCall(TaoCreate(PETSC_COMM_WORLD, &tao)); 1079566063dSJacob Faibussowitsch PetscCall(TaoSetType(tao, TAOCG)); 108c4762a1bSJed Brown 109c4762a1bSJed Brown /* Set initial solution guess */ 1109566063dSJacob Faibussowitsch PetscCall(FormInitialGuess(&user, x)); 1119566063dSJacob Faibussowitsch PetscCall(TaoSetSolution(tao, x)); 112c4762a1bSJed Brown 113c4762a1bSJed Brown /* Set routine for function and gradient evaluation */ 1149566063dSJacob Faibussowitsch PetscCall(TaoSetObjectiveAndGradient(tao, NULL, FormFunctionGradient, (void *)&user)); 115c4762a1bSJed Brown 1169566063dSJacob Faibussowitsch PetscCall(TaoSetHessian(tao, H, H, FormHessian, (void *)&user)); 117c4762a1bSJed Brown 118c4762a1bSJed Brown /* Check for any TAO command line options */ 1199566063dSJacob Faibussowitsch PetscCall(TaoSetFromOptions(tao)); 120c4762a1bSJed Brown 1219566063dSJacob Faibussowitsch PetscCall(TaoGetKSP(tao, &ksp)); 122c4762a1bSJed Brown if (ksp) { 1239566063dSJacob Faibussowitsch PetscCall(KSPGetPC(ksp, &pc)); 1249566063dSJacob Faibussowitsch PetscCall(PCSetType(pc, PCNONE)); 125c4762a1bSJed Brown } 126c4762a1bSJed Brown 127c4762a1bSJed Brown /* SOLVE THE APPLICATION */ 1289566063dSJacob Faibussowitsch PetscCall(TaoSolve(tao)); 129c4762a1bSJed Brown 130c4762a1bSJed Brown /* Free TAO data structures */ 1319566063dSJacob Faibussowitsch PetscCall(TaoDestroy(&tao)); 132c4762a1bSJed Brown 133c4762a1bSJed Brown /* Free PETSc data structures */ 1349566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 1359566063dSJacob Faibussowitsch PetscCall(MatDestroy(&H)); 136c4762a1bSJed Brown 1379566063dSJacob Faibussowitsch PetscCall(VecDestroy(&user.localX)); 1389566063dSJacob Faibussowitsch PetscCall(DMDestroy(&user.dm)); 139c4762a1bSJed Brown 140c4762a1bSJed Brown PetscFinalize(); 141c4762a1bSJed Brown return 0; 142c4762a1bSJed Brown } 143c4762a1bSJed Brown 144c4762a1bSJed Brown /* ------------------------------------------------------------------- */ 145c4762a1bSJed Brown /* 146c4762a1bSJed Brown FormInitialGuess - Computes an initial approximation to the solution. 147c4762a1bSJed Brown 148c4762a1bSJed Brown Input Parameters: 149c4762a1bSJed Brown . user - user-defined application context 150c4762a1bSJed Brown . X - vector 151c4762a1bSJed Brown 152c4762a1bSJed Brown Output Parameters: 153c4762a1bSJed Brown X - vector 154c4762a1bSJed Brown */ 155*9371c9d4SSatish Balay PetscErrorCode FormInitialGuess(AppCtx *user, Vec X) { 156c4762a1bSJed Brown PetscInt i, j, k, mx = user->mx, my = user->my; 157c4762a1bSJed Brown PetscInt xs, ys, xm, ym, gxm, gym, gxs, gys, xe, ye; 158c4762a1bSJed Brown PetscReal hx = 1.0 / (mx + 1), hy = 1.0 / (my + 1), temp, val; 159c4762a1bSJed Brown 160c4762a1bSJed Brown PetscFunctionBegin; 161c4762a1bSJed Brown /* Get local mesh boundaries */ 1629566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(user->dm, &xs, &ys, NULL, &xm, &ym, NULL)); 1639566063dSJacob Faibussowitsch PetscCall(DMDAGetGhostCorners(user->dm, &gxs, &gys, NULL, &gxm, &gym, NULL)); 164c4762a1bSJed Brown 165c4762a1bSJed Brown /* Compute initial guess over locally owned part of mesh */ 166c4762a1bSJed Brown xe = xs + xm; 167c4762a1bSJed Brown ye = ys + ym; 168c4762a1bSJed Brown for (j = ys; j < ye; j++) { /* for (j=0; j<my; j++) */ 169c4762a1bSJed Brown temp = PetscMin(j + 1, my - j) * hy; 170c4762a1bSJed Brown for (i = xs; i < xe; i++) { /* for (i=0; i<mx; i++) */ 171c4762a1bSJed Brown k = (j - gys) * gxm + i - gxs; 172c4762a1bSJed Brown val = PetscMin((PetscMin(i + 1, mx - i)) * hx, temp); 1739566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(X, 1, &k, &val, ADD_VALUES)); 174c4762a1bSJed Brown } 175c4762a1bSJed Brown } 1769566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(X)); 1779566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(X)); 178c4762a1bSJed Brown PetscFunctionReturn(0); 179c4762a1bSJed Brown } 180c4762a1bSJed Brown 181c4762a1bSJed Brown /* ------------------------------------------------------------------ */ 182c4762a1bSJed Brown /* 183c4762a1bSJed Brown FormFunctionGradient - Evaluates the function and corresponding gradient. 184c4762a1bSJed Brown 185c4762a1bSJed Brown Input Parameters: 186c4762a1bSJed Brown tao - the Tao context 187c4762a1bSJed Brown X - the input vector 188a82e8c82SStefano Zampini ptr - optional user-defined context, as set by TaoSetObjectiveAndGradient() 189c4762a1bSJed Brown 190c4762a1bSJed Brown Output Parameters: 191c4762a1bSJed Brown f - the newly evaluated function 192c4762a1bSJed Brown G - the newly evaluated gradient 193c4762a1bSJed Brown */ 194*9371c9d4SSatish Balay PetscErrorCode FormFunctionGradient(Tao tao, Vec X, PetscReal *f, Vec G, void *ptr) { 195c4762a1bSJed Brown AppCtx *user = (AppCtx *)ptr; 196c4762a1bSJed Brown PetscInt i, j, k, ind; 197c4762a1bSJed Brown PetscInt xe, ye, xsm, ysm, xep, yep; 198c4762a1bSJed Brown PetscInt xs, ys, xm, ym, gxm, gym, gxs, gys; 199c4762a1bSJed Brown PetscInt mx = user->mx, my = user->my; 200c4762a1bSJed Brown PetscReal three = 3.0, zero = 0.0, *x, floc, cdiv3 = user->param / three; 201c4762a1bSJed Brown PetscReal p5 = 0.5, area, val, flin, fquad; 202c4762a1bSJed Brown PetscReal v, vb, vl, vr, vt, dvdx, dvdy; 203c4762a1bSJed Brown PetscReal hx = 1.0 / (user->mx + 1); 204c4762a1bSJed Brown PetscReal hy = 1.0 / (user->my + 1); 205c4762a1bSJed Brown Vec localX = user->localX; 206c4762a1bSJed Brown 207c4762a1bSJed Brown PetscFunctionBegin; 208c4762a1bSJed Brown /* Initialize */ 209c4762a1bSJed Brown flin = fquad = zero; 210c4762a1bSJed Brown 2119566063dSJacob Faibussowitsch PetscCall(VecSet(G, zero)); 212c4762a1bSJed Brown /* 213c4762a1bSJed Brown Scatter ghost points to local vector,using the 2-step process 214c4762a1bSJed Brown DMGlobalToLocalBegin(),DMGlobalToLocalEnd(). 215c4762a1bSJed Brown By placing code between these two statements, computations can be 216c4762a1bSJed Brown done while messages are in transition. 217c4762a1bSJed Brown */ 2189566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalBegin(user->dm, X, INSERT_VALUES, localX)); 2199566063dSJacob Faibussowitsch PetscCall(DMGlobalToLocalEnd(user->dm, X, INSERT_VALUES, localX)); 220c4762a1bSJed Brown 221c4762a1bSJed Brown /* Get pointer to vector data */ 2229566063dSJacob Faibussowitsch PetscCall(VecGetArray(localX, &x)); 223c4762a1bSJed Brown 224c4762a1bSJed Brown /* Get local mesh boundaries */ 2259566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(user->dm, &xs, &ys, NULL, &xm, &ym, NULL)); 2269566063dSJacob Faibussowitsch PetscCall(DMDAGetGhostCorners(user->dm, &gxs, &gys, NULL, &gxm, &gym, NULL)); 227c4762a1bSJed Brown 228c4762a1bSJed Brown /* Set local loop dimensions */ 229c4762a1bSJed Brown xe = xs + xm; 230c4762a1bSJed Brown ye = ys + ym; 231c4762a1bSJed Brown if (xs == 0) xsm = xs - 1; 232c4762a1bSJed Brown else xsm = xs; 233c4762a1bSJed Brown if (ys == 0) ysm = ys - 1; 234c4762a1bSJed Brown else ysm = ys; 235c4762a1bSJed Brown if (xe == mx) xep = xe + 1; 236c4762a1bSJed Brown else xep = xe; 237c4762a1bSJed Brown if (ye == my) yep = ye + 1; 238c4762a1bSJed Brown else yep = ye; 239c4762a1bSJed Brown 240c4762a1bSJed Brown /* Compute local gradient contributions over the lower triangular elements */ 241c4762a1bSJed Brown for (j = ysm; j < ye; j++) { /* for (j=-1; j<my; j++) */ 242c4762a1bSJed Brown for (i = xsm; i < xe; i++) { /* for (i=-1; i<mx; i++) */ 243c4762a1bSJed Brown k = (j - gys) * gxm + i - gxs; 244c4762a1bSJed Brown v = zero; 245c4762a1bSJed Brown vr = zero; 246c4762a1bSJed Brown vt = zero; 247c4762a1bSJed Brown if (i >= 0 && j >= 0) v = x[k]; 248c4762a1bSJed Brown if (i < mx - 1 && j > -1) vr = x[k + 1]; 249c4762a1bSJed Brown if (i > -1 && j < my - 1) vt = x[k + gxm]; 250c4762a1bSJed Brown dvdx = (vr - v) / hx; 251c4762a1bSJed Brown dvdy = (vt - v) / hy; 252c4762a1bSJed Brown if (i != -1 && j != -1) { 253*9371c9d4SSatish Balay ind = k; 254*9371c9d4SSatish Balay val = -dvdx / hx - dvdy / hy - cdiv3; 2559566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &k, &val, ADD_VALUES)); 256c4762a1bSJed Brown } 257c4762a1bSJed Brown if (i != mx - 1 && j != -1) { 258*9371c9d4SSatish Balay ind = k + 1; 259*9371c9d4SSatish Balay val = dvdx / hx - cdiv3; 2609566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &ind, &val, ADD_VALUES)); 261c4762a1bSJed Brown } 262c4762a1bSJed Brown if (i != -1 && j != my - 1) { 263*9371c9d4SSatish Balay ind = k + gxm; 264*9371c9d4SSatish Balay val = dvdy / hy - cdiv3; 2659566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &ind, &val, ADD_VALUES)); 266c4762a1bSJed Brown } 267c4762a1bSJed Brown fquad += dvdx * dvdx + dvdy * dvdy; 268c4762a1bSJed Brown flin -= cdiv3 * (v + vr + vt); 269c4762a1bSJed Brown } 270c4762a1bSJed Brown } 271c4762a1bSJed Brown 272c4762a1bSJed Brown /* Compute local gradient contributions over the upper triangular elements */ 273c4762a1bSJed Brown for (j = ys; j < yep; j++) { /* for (j=0; j<=my; j++) */ 274c4762a1bSJed Brown for (i = xs; i < xep; i++) { /* for (i=0; i<=mx; i++) */ 275c4762a1bSJed Brown k = (j - gys) * gxm + i - gxs; 276c4762a1bSJed Brown vb = zero; 277c4762a1bSJed Brown vl = zero; 278c4762a1bSJed Brown v = zero; 279c4762a1bSJed Brown if (i < mx && j > 0) vb = x[k - gxm]; 280c4762a1bSJed Brown if (i > 0 && j < my) vl = x[k - 1]; 281c4762a1bSJed Brown if (i < mx && j < my) v = x[k]; 282c4762a1bSJed Brown dvdx = (v - vl) / hx; 283c4762a1bSJed Brown dvdy = (v - vb) / hy; 284c4762a1bSJed Brown if (i != mx && j != 0) { 285*9371c9d4SSatish Balay ind = k - gxm; 286*9371c9d4SSatish Balay val = -dvdy / hy - cdiv3; 2879566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &ind, &val, ADD_VALUES)); 288c4762a1bSJed Brown } 289c4762a1bSJed Brown if (i != 0 && j != my) { 290*9371c9d4SSatish Balay ind = k - 1; 291*9371c9d4SSatish Balay val = -dvdx / hx - cdiv3; 2929566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &ind, &val, ADD_VALUES)); 293c4762a1bSJed Brown } 294c4762a1bSJed Brown if (i != mx && j != my) { 295*9371c9d4SSatish Balay ind = k; 296*9371c9d4SSatish Balay val = dvdx / hx + dvdy / hy - cdiv3; 2979566063dSJacob Faibussowitsch PetscCall(VecSetValuesLocal(G, 1, &ind, &val, ADD_VALUES)); 298c4762a1bSJed Brown } 299c4762a1bSJed Brown fquad += dvdx * dvdx + dvdy * dvdy; 300c4762a1bSJed Brown flin -= cdiv3 * (vb + vl + v); 301c4762a1bSJed Brown } 302c4762a1bSJed Brown } 303c4762a1bSJed Brown 304c4762a1bSJed Brown /* Restore vector */ 3059566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(localX, &x)); 306c4762a1bSJed Brown 307c4762a1bSJed Brown /* Assemble gradient vector */ 3089566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(G)); 3099566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(G)); 310c4762a1bSJed Brown 311c4762a1bSJed Brown /* Scale the gradient */ 312c4762a1bSJed Brown area = p5 * hx * hy; 313c4762a1bSJed Brown floc = area * (p5 * fquad + flin); 3149566063dSJacob Faibussowitsch PetscCall(VecScale(G, area)); 315c4762a1bSJed Brown 3169566063dSJacob Faibussowitsch /* Sum function contributions from all processes */ /* TODO: Change to PetscCallMPI() */ 3179566063dSJacob Faibussowitsch PetscCall((PetscErrorCode)MPI_Allreduce((void *)&floc, (void *)f, 1, MPIU_REAL, MPIU_SUM, MPI_COMM_WORLD)); 318c4762a1bSJed Brown 3199566063dSJacob Faibussowitsch PetscCall(PetscLogFlops((ye - ysm) * (xe - xsm) * 20 + (xep - xs) * (yep - ys) * 16)); 320c4762a1bSJed Brown PetscFunctionReturn(0); 321c4762a1bSJed Brown } 322c4762a1bSJed Brown 323*9371c9d4SSatish Balay PetscErrorCode FormHessian(Tao tao, Vec X, Mat A, Mat Hpre, void *ctx) { 324c4762a1bSJed Brown AppCtx *user = (AppCtx *)ctx; 325c4762a1bSJed Brown PetscInt i, j, k; 326c4762a1bSJed Brown PetscInt col[5], row; 327c4762a1bSJed Brown PetscInt xs, xm, gxs, gxm, ys, ym, gys, gym; 328c4762a1bSJed Brown PetscReal v[5]; 329c4762a1bSJed Brown PetscReal hx = 1.0 / (user->mx + 1), hy = 1.0 / (user->my + 1), hxhx = 1.0 / (hx * hx), hyhy = 1.0 / (hy * hy), area = 0.5 * hx * hy; 330c4762a1bSJed Brown 331c4762a1bSJed Brown /* Compute the quadratic term in the objective function */ 332c4762a1bSJed Brown 333c4762a1bSJed Brown /* 334c4762a1bSJed Brown Get local grid boundaries 335c4762a1bSJed Brown */ 336c4762a1bSJed Brown 337c4762a1bSJed Brown PetscFunctionBegin; 3389566063dSJacob Faibussowitsch PetscCall(DMDAGetCorners(user->dm, &xs, &ys, NULL, &xm, &ym, NULL)); 3399566063dSJacob Faibussowitsch PetscCall(DMDAGetGhostCorners(user->dm, &gxs, &gys, NULL, &gxm, &gym, NULL)); 340c4762a1bSJed Brown 341c4762a1bSJed Brown for (j = ys; j < ys + ym; j++) { 342c4762a1bSJed Brown for (i = xs; i < xs + xm; i++) { 343c4762a1bSJed Brown row = (j - gys) * gxm + (i - gxs); 344c4762a1bSJed Brown 345c4762a1bSJed Brown k = 0; 346c4762a1bSJed Brown if (j > gys) { 347*9371c9d4SSatish Balay v[k] = -2 * hyhy; 348*9371c9d4SSatish Balay col[k] = row - gxm; 349*9371c9d4SSatish Balay k++; 350c4762a1bSJed Brown } 351c4762a1bSJed Brown 352c4762a1bSJed Brown if (i > gxs) { 353*9371c9d4SSatish Balay v[k] = -2 * hxhx; 354*9371c9d4SSatish Balay col[k] = row - 1; 355*9371c9d4SSatish Balay k++; 356c4762a1bSJed Brown } 357c4762a1bSJed Brown 358*9371c9d4SSatish Balay v[k] = 4.0 * (hxhx + hyhy); 359*9371c9d4SSatish Balay col[k] = row; 360*9371c9d4SSatish Balay k++; 361c4762a1bSJed Brown 362c4762a1bSJed Brown if (i + 1 < gxs + gxm) { 363*9371c9d4SSatish Balay v[k] = -2.0 * hxhx; 364*9371c9d4SSatish Balay col[k] = row + 1; 365*9371c9d4SSatish Balay k++; 366c4762a1bSJed Brown } 367c4762a1bSJed Brown 368c4762a1bSJed Brown if (j + 1 < gys + gym) { 369*9371c9d4SSatish Balay v[k] = -2 * hyhy; 370*9371c9d4SSatish Balay col[k] = row + gxm; 371*9371c9d4SSatish Balay k++; 372c4762a1bSJed Brown } 373c4762a1bSJed Brown 3749566063dSJacob Faibussowitsch PetscCall(MatSetValuesLocal(A, 1, &row, k, col, v, INSERT_VALUES)); 375c4762a1bSJed Brown } 376c4762a1bSJed Brown } 377c4762a1bSJed Brown /* 378c4762a1bSJed Brown Assemble matrix, using the 2-step process: 379c4762a1bSJed Brown MatAssemblyBegin(), MatAssemblyEnd(). 380c4762a1bSJed Brown By placing code between these two statements, computations can be 381c4762a1bSJed Brown done while messages are in transition. 382c4762a1bSJed Brown */ 3839566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 3849566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 385c4762a1bSJed Brown /* 386c4762a1bSJed Brown Tell the matrix we will never add a new nonzero location to the 387c4762a1bSJed Brown matrix. If we do it will generate an error. 388c4762a1bSJed Brown */ 3899566063dSJacob Faibussowitsch PetscCall(MatScale(A, area)); 3909566063dSJacob Faibussowitsch PetscCall(MatSetOption(A, MAT_NEW_NONZERO_LOCATION_ERR, PETSC_TRUE)); 3919566063dSJacob Faibussowitsch PetscCall(MatSetOption(A, MAT_SYMMETRIC, PETSC_TRUE)); 3929566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(9 * xm * ym + 49 * xm)); 393c4762a1bSJed Brown PetscFunctionReturn(0); 394c4762a1bSJed Brown } 395c4762a1bSJed Brown 396c4762a1bSJed Brown /*TEST 397c4762a1bSJed Brown 398c4762a1bSJed Brown build: 399c4762a1bSJed Brown requires: !complex 400c4762a1bSJed Brown 401c4762a1bSJed Brown test: 402c4762a1bSJed Brown suffix: 1 403c4762a1bSJed Brown nsize: 2 404c4762a1bSJed Brown args: -tao_smonitor -tao_type nls -mx 16 -my 16 -tao_gatol 1.e-4 405c4762a1bSJed Brown 406c4762a1bSJed Brown TEST*/ 407