18a381b04SJed Brown /* 28a381b04SJed Brown Code for timestepping with additive Runge-Kutta IMEX method 38a381b04SJed Brown 48a381b04SJed Brown Notes: 58a381b04SJed Brown The general system is written as 68a381b04SJed Brown 7f9c1d6abSBarry Smith F(t,U,Udot) = G(t,U) 88a381b04SJed Brown 98a381b04SJed Brown where F represents the stiff part of the physics and G represents the non-stiff part. 108a381b04SJed Brown 118a381b04SJed Brown */ 12b45d2f2cSJed Brown #include <petsc-private/tsimpl.h> /*I "petscts.h" I*/ 131e25c274SJed Brown #include <petscdm.h> 148a381b04SJed Brown 1519fd82e9SBarry Smith static TSARKIMEXType TSARKIMEXDefault = TSARKIMEX3; 168a381b04SJed Brown static PetscBool TSARKIMEXRegisterAllCalled; 178a381b04SJed Brown static PetscBool TSARKIMEXPackageInitialized; 18e817cc15SEmil Constantinescu static PetscInt explicit_stage_time_id; 1956dcabbaSDebojyoti Ghosh static PetscErrorCode TSExtrapolate_ARKIMEX(TS,PetscReal,Vec); 208a381b04SJed Brown 218a381b04SJed Brown typedef struct _ARKTableau *ARKTableau; 228a381b04SJed Brown struct _ARKTableau { 238a381b04SJed Brown char *name; 244f385281SJed Brown PetscInt order; /* Classical approximation order of the method */ 254f385281SJed Brown PetscInt s; /* Number of stages */ 26e817cc15SEmil Constantinescu PetscBool stiffly_accurate; /* The implicit part is stiffly accurate*/ 27e817cc15SEmil Constantinescu PetscBool FSAL_implicit; /* The implicit part is FSAL*/ 28e817cc15SEmil Constantinescu PetscBool explicit_first_stage; /* The implicit part has an explicit first stage*/ 294f385281SJed Brown PetscInt pinterp; /* Interpolation order */ 304f385281SJed Brown PetscReal *At,*bt,*ct; /* Stiff tableau */ 318a381b04SJed Brown PetscReal *A,*b,*c; /* Non-stiff tableau */ 32108c343cSJed Brown PetscReal *bembedt,*bembed; /* Embedded formula of order one less (order-1) */ 33cd652676SJed Brown PetscReal *binterpt,*binterp; /* Dense output formula */ 34108c343cSJed Brown PetscReal ccfl; /* Placeholder for CFL coefficient relative to forward Euler */ 358a381b04SJed Brown }; 368a381b04SJed Brown typedef struct _ARKTableauLink *ARKTableauLink; 378a381b04SJed Brown struct _ARKTableauLink { 388a381b04SJed Brown struct _ARKTableau tab; 398a381b04SJed Brown ARKTableauLink next; 408a381b04SJed Brown }; 418a381b04SJed Brown static ARKTableauLink ARKTableauList; 428a381b04SJed Brown 438a381b04SJed Brown typedef struct { 448a381b04SJed Brown ARKTableau tableau; 458a381b04SJed Brown Vec *Y; /* States computed during the step */ 468a381b04SJed Brown Vec *YdotI; /* Time derivatives for the stiff part */ 478a381b04SJed Brown Vec *YdotRHS; /* Function evaluations for the non-stiff part */ 489eef816dSJed Brown PetscBool prev_step_valid; /* Stored previous step (Y_prev, YdotI_prev, YdotRHS_prev) is valid */ 4956dcabbaSDebojyoti Ghosh Vec *Y_prev; /* States computed during the previous time step */ 5056dcabbaSDebojyoti Ghosh Vec *YdotI_prev; /* Time derivatives for the stiff part for the previous time step*/ 5156dcabbaSDebojyoti Ghosh Vec *YdotRHS_prev; /* Function evaluations for the non-stiff part for the previous time step*/ 52e817cc15SEmil Constantinescu Vec Ydot0; /* Holds the slope from the previous step in FSAL case */ 538a381b04SJed Brown Vec Ydot; /* Work vector holding Ydot during residual evaluation */ 548a381b04SJed Brown Vec Work; /* Generic work vector */ 558a381b04SJed Brown Vec Z; /* Ydot = shift(Y-Z) */ 568a381b04SJed Brown PetscScalar *work; /* Scalar work */ 57b296d7d5SJed Brown PetscReal scoeff; /* shift = scoeff/dt */ 588a381b04SJed Brown PetscReal stage_time; 594cc180ffSJed Brown PetscBool imex; 6056dcabbaSDebojyoti Ghosh PetscBool init_guess_extrp; /* Extrapolate initial guess from previous time-step stage values */ 61108c343cSJed Brown TSStepStatus status; 628a381b04SJed Brown } TS_ARKIMEX; 631f80e275SEmil Constantinescu /*MC 641f80e275SEmil Constantinescu TSARKIMEXARS122 - Second order ARK IMEX scheme. 658a381b04SJed Brown 661f80e275SEmil Constantinescu This method has one explicit stage and one implicit stage. 671f80e275SEmil Constantinescu 681f80e275SEmil Constantinescu References: 69d0685a90SJed Brown U. Ascher, S. Ruuth, R. J. Spiteri, Implicit-explicit Runge-Kutta methods for time dependent Partial Differential Equations. Appl. Numer. Math. 25, (1997), pp. 151-167. 701f80e275SEmil Constantinescu 711f80e275SEmil Constantinescu Level: advanced 721f80e275SEmil Constantinescu 731f80e275SEmil Constantinescu .seealso: TSARKIMEX 741f80e275SEmil Constantinescu M*/ 751f80e275SEmil Constantinescu /*MC 761f80e275SEmil Constantinescu TSARKIMEXA2 - Second order ARK IMEX scheme with A-stable implicit part. 771f80e275SEmil Constantinescu 781f80e275SEmil Constantinescu This method has an explicit stage and one implicit stage, and has an A-stable implicit scheme. This method was provided by Emil Constantinescu. 791f80e275SEmil Constantinescu 801f80e275SEmil Constantinescu Level: advanced 811f80e275SEmil Constantinescu 821f80e275SEmil Constantinescu .seealso: TSARKIMEX 831f80e275SEmil Constantinescu M*/ 841f80e275SEmil Constantinescu /*MC 851f80e275SEmil Constantinescu TSARKIMEXL2 - Second order ARK IMEX scheme with L-stable implicit part. 861f80e275SEmil Constantinescu 871f80e275SEmil Constantinescu This method has two implicit stages, and L-stable implicit scheme. 881f80e275SEmil Constantinescu 891f80e275SEmil Constantinescu References: 901f80e275SEmil Constantinescu L. Pareschi, G. Russo, Implicit-Explicit Runge-Kutta schemes and applications to hyperbolic systems with relaxations. Journal of Scientific Computing Volume: 25, Issue: 1, October, 2005, pp. 129-155 911f80e275SEmil Constantinescu 921f80e275SEmil Constantinescu Level: advanced 931f80e275SEmil Constantinescu 941f80e275SEmil Constantinescu .seealso: TSARKIMEX 951f80e275SEmil Constantinescu M*/ 961f80e275SEmil Constantinescu /*MC 97e817cc15SEmil Constantinescu TSARKIMEX1BEE - First order Backward Euler represented as an ARK IMEX scheme with extrapolation as error estimator. This is a 3-stage method. 98e817cc15SEmil Constantinescu 99e817cc15SEmil Constantinescu This method is aimed at starting the integration of implicit DAEs when explicit first-stage ARK methods are used. 100e817cc15SEmil Constantinescu 101e817cc15SEmil Constantinescu Level: advanced 102e817cc15SEmil Constantinescu 103e817cc15SEmil Constantinescu .seealso: TSARKIMEX 104e817cc15SEmil Constantinescu M*/ 105e817cc15SEmil Constantinescu /*MC 1061f80e275SEmil Constantinescu TSARKIMEX2C - Second order ARK IMEX scheme with L-stable implicit part. 1071f80e275SEmil Constantinescu 1081f80e275SEmil Constantinescu This method has one explicit stage and two implicit stages. The implicit part is the same as in TSARKIMEX2D and TSARKIMEX2E, but the explicit part has a larger stability region on the negative real axis. This method was provided by Emil Constantinescu. 1091f80e275SEmil Constantinescu 1101f80e275SEmil Constantinescu Level: advanced 1111f80e275SEmil Constantinescu 1121f80e275SEmil Constantinescu .seealso: TSARKIMEX 1131f80e275SEmil Constantinescu M*/ 11464f491ddSJed Brown /*MC 11564f491ddSJed Brown TSARKIMEX2D - Second order ARK IMEX scheme with L-stable implicit part. 11664f491ddSJed Brown 117617a39beSEmil Constantinescu This method has one explicit stage and two implicit stages. The stability function is independent of the explicit part in the infinity limit of the implict component. This method was provided by Emil Constantinescu. 11864f491ddSJed Brown 119b330ce4dSSatish Balay Level: advanced 120b330ce4dSSatish Balay 12164f491ddSJed Brown .seealso: TSARKIMEX 12264f491ddSJed Brown M*/ 12364f491ddSJed Brown /*MC 12464f491ddSJed Brown TSARKIMEX2E - Second order ARK IMEX scheme with L-stable implicit part. 12564f491ddSJed Brown 12664f491ddSJed Brown This method has one explicit stage and two implicit stages. It is is an optimal method developed by Emil Constantinescu. 12764f491ddSJed Brown 128b330ce4dSSatish Balay Level: advanced 129b330ce4dSSatish Balay 13064f491ddSJed Brown .seealso: TSARKIMEX 13164f491ddSJed Brown M*/ 13264f491ddSJed Brown /*MC 1336cf0794eSJed Brown TSARKIMEXPRSSP2 - Second order SSP ARK IMEX scheme. 1346cf0794eSJed Brown 1356cf0794eSJed Brown This method has three implicit stages. 1366cf0794eSJed Brown 1376cf0794eSJed Brown References: 1386cf0794eSJed Brown L. Pareschi, G. Russo, Implicit-Explicit Runge-Kutta schemes and applications to hyperbolic systems with relaxations. Journal of Scientific Computing Volume: 25, Issue: 1, October, 2005, pp. 129-155 1396cf0794eSJed Brown 1406cf0794eSJed Brown This method is referred to as SSP2-(3,3,2) in http://arxiv.org/abs/1110.4375 1416cf0794eSJed Brown 1426cf0794eSJed Brown Level: advanced 1436cf0794eSJed Brown 1446cf0794eSJed Brown .seealso: TSARKIMEX 1456cf0794eSJed Brown M*/ 1466cf0794eSJed Brown /*MC 14764f491ddSJed Brown TSARKIMEX3 - Third order ARK IMEX scheme with L-stable implicit part. 14864f491ddSJed Brown 14964f491ddSJed Brown This method has one explicit stage and three implicit stages. 15064f491ddSJed Brown 15164f491ddSJed Brown References: 15264f491ddSJed Brown Kennedy and Carpenter 2003. 15364f491ddSJed Brown 154b330ce4dSSatish Balay Level: advanced 155b330ce4dSSatish Balay 15664f491ddSJed Brown .seealso: TSARKIMEX 15764f491ddSJed Brown M*/ 15864f491ddSJed Brown /*MC 1596cf0794eSJed Brown TSARKIMEXARS443 - Third order ARK IMEX scheme. 1606cf0794eSJed Brown 1616cf0794eSJed Brown This method has one explicit stage and four implicit stages. 1626cf0794eSJed Brown 1636cf0794eSJed Brown References: 164d0685a90SJed Brown U. Ascher, S. Ruuth, R. J. Spiteri, Implicit-explicit Runge-Kutta methods for time dependent Partial Differential Equations. Appl. Numer. Math. 25, (1997), pp. 151-167. 1656cf0794eSJed Brown 1666cf0794eSJed Brown This method is referred to as ARS(4,4,3) in http://arxiv.org/abs/1110.4375 1676cf0794eSJed Brown 1686cf0794eSJed Brown Level: advanced 1696cf0794eSJed Brown 1706cf0794eSJed Brown .seealso: TSARKIMEX 1716cf0794eSJed Brown M*/ 1726cf0794eSJed Brown /*MC 1736cf0794eSJed Brown TSARKIMEXBPR3 - Third order ARK IMEX scheme. 1746cf0794eSJed Brown 1756cf0794eSJed Brown This method has one explicit stage and four implicit stages. 1766cf0794eSJed Brown 1776cf0794eSJed Brown References: 1786cf0794eSJed Brown This method is referred to as ARK3 in http://arxiv.org/abs/1110.4375 1796cf0794eSJed Brown 1806cf0794eSJed Brown Level: advanced 1816cf0794eSJed Brown 1826cf0794eSJed Brown .seealso: TSARKIMEX 1836cf0794eSJed Brown M*/ 1846cf0794eSJed Brown /*MC 18564f491ddSJed Brown TSARKIMEX4 - Fourth order ARK IMEX scheme with L-stable implicit part. 18664f491ddSJed Brown 18764f491ddSJed Brown This method has one explicit stage and four implicit stages. 18864f491ddSJed Brown 18964f491ddSJed Brown References: 19064f491ddSJed Brown Kennedy and Carpenter 2003. 19164f491ddSJed Brown 192b330ce4dSSatish Balay Level: advanced 193b330ce4dSSatish Balay 19464f491ddSJed Brown .seealso: TSARKIMEX 19564f491ddSJed Brown M*/ 19664f491ddSJed Brown /*MC 19764f491ddSJed Brown TSARKIMEX5 - Fifth order ARK IMEX scheme with L-stable implicit part. 19864f491ddSJed Brown 19964f491ddSJed Brown This method has one explicit stage and five implicit stages. 20064f491ddSJed Brown 20164f491ddSJed Brown References: 20264f491ddSJed Brown Kennedy and Carpenter 2003. 20364f491ddSJed Brown 204b330ce4dSSatish Balay Level: advanced 205b330ce4dSSatish Balay 20664f491ddSJed Brown .seealso: TSARKIMEX 20764f491ddSJed Brown M*/ 20864f491ddSJed Brown 2098a381b04SJed Brown #undef __FUNCT__ 2108a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegisterAll" 2118a381b04SJed Brown /*@C 2128a381b04SJed Brown TSARKIMEXRegisterAll - Registers all of the additive Runge-Kutta implicit-explicit methods in TSARKIMEX 2138a381b04SJed Brown 214fca742c7SJed Brown Not Collective, but should be called by all processes which will need the schemes to be registered 2158a381b04SJed Brown 2168a381b04SJed Brown Level: advanced 2178a381b04SJed Brown 2188a381b04SJed Brown .keywords: TS, TSARKIMEX, register, all 2198a381b04SJed Brown 2208a381b04SJed Brown .seealso: TSARKIMEXRegisterDestroy() 2218a381b04SJed Brown @*/ 2228a381b04SJed Brown PetscErrorCode TSARKIMEXRegisterAll(void) 2238a381b04SJed Brown { 2248a381b04SJed Brown PetscErrorCode ierr; 2258a381b04SJed Brown 2268a381b04SJed Brown PetscFunctionBegin; 2278a381b04SJed Brown if (TSARKIMEXRegisterAllCalled) PetscFunctionReturn(0); 2288a381b04SJed Brown TSARKIMEXRegisterAllCalled = PETSC_TRUE; 229e817cc15SEmil Constantinescu 230e817cc15SEmil Constantinescu { 231e817cc15SEmil Constantinescu const PetscReal 232e817cc15SEmil Constantinescu A[3][3] = {{0.0,0.0,0.0}, 233e817cc15SEmil Constantinescu {0.0,0.0,0.0}, 234748ad121SEmil Constantinescu {0.0,0.5,0.0}}, 235e817cc15SEmil Constantinescu At[3][3] = {{1.0,0.0,0.0}, 236e817cc15SEmil Constantinescu {0.0,0.5,0.0}, 237e817cc15SEmil Constantinescu {0.0,0.5,0.5}}, 238e817cc15SEmil Constantinescu b[3] = {0.0,0.5,0.5}, 239e817cc15SEmil Constantinescu bembedt[3] = {1.0,0.0,0.0}; 2400298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX1BEE,2,3,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 241e817cc15SEmil Constantinescu } 2428a381b04SJed Brown { 2438a381b04SJed Brown const PetscReal 2441f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2451f80e275SEmil Constantinescu {0.5,0.0}}, 2461f80e275SEmil Constantinescu At[2][2] = {{0.0,0.0}, 2471f80e275SEmil Constantinescu {0.0,0.5}}, 2481f80e275SEmil Constantinescu b[2] = {0.0,1.0}, 2491f80e275SEmil Constantinescu bembedt[2] = {0.5,0.5}; 2501f80e275SEmil Constantinescu /* binterpt[2][2] = {{1.0,-1.0},{0.0,1.0}}; second order dense output has poor stability properties and hence it is not currently in use*/ 2510298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXARS122,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 2521f80e275SEmil Constantinescu } 2531f80e275SEmil Constantinescu { 2541f80e275SEmil Constantinescu const PetscReal 2551f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2561f80e275SEmil Constantinescu {1.0,0.0}}, 2571f80e275SEmil Constantinescu At[2][2] = {{0.0,0.0}, 2581f80e275SEmil Constantinescu {0.5,0.5}}, 2591f80e275SEmil Constantinescu b[2] = {0.5,0.5}, 2601f80e275SEmil Constantinescu bembedt[2] = {0.0,1.0}; 2611f80e275SEmil Constantinescu /* binterpt[2][2] = {{1.0,-0.5},{0.0,0.5}} second order dense output has poor stability properties and hence it is not currently in use*/ 2620298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXA2,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 2631f80e275SEmil Constantinescu } 2641f80e275SEmil Constantinescu { 265da80777bSKarl Rupp /* const PetscReal us2 = 1.0-1.0/PetscSqrtReal((PetscReal)2.0); Direct evaluation: 0.2928932188134524755992. Used below to ensure all values are available at compile time */ 2661f80e275SEmil Constantinescu const PetscReal 2671f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2681f80e275SEmil Constantinescu {1.0,0.0}}, 269da80777bSKarl Rupp At[2][2] = {{0.2928932188134524755992,0.0}, 270da80777bSKarl Rupp {1.0-2.0*0.2928932188134524755992,0.2928932188134524755992}}, 2711f80e275SEmil Constantinescu b[2] = {0.5,0.5}, 2721f80e275SEmil Constantinescu bembedt[2] = {0.0,1.0}, 273da80777bSKarl Rupp binterpt[2][2] = {{ (0.2928932188134524755992-1.0)/(2.0*0.2928932188134524755992-1.0),-1/(2.0*(1.0-2.0*0.2928932188134524755992))}, 274da80777bSKarl Rupp {1-(0.2928932188134524755992-1.0)/(2.0*0.2928932188134524755992-1.0),-1/(2.0*(1.0-2.0*0.2928932188134524755992))}}, 2751f80e275SEmil Constantinescu binterp[2][2] = {{1.0,-0.5},{0.0,0.5}}; 2760298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXL2,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,2,binterpt[0],binterp[0]);CHKERRQ(ierr); 2771f80e275SEmil Constantinescu } 2781f80e275SEmil Constantinescu { 279da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 280da80777bSKarl Rupp const PetscReal 2818a381b04SJed Brown A[3][3] = {{0,0,0}, 282da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 283617a39beSEmil Constantinescu {0.5,0.5,0}}, 284da80777bSKarl Rupp At[3][3] = {{0,0,0}, 285da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 286da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 287da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 288da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 289da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 290da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 2910298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2C,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 2921f80e275SEmil Constantinescu } 2931f80e275SEmil Constantinescu { 294da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 295da80777bSKarl Rupp const PetscReal 2961f80e275SEmil Constantinescu A[3][3] = {{0,0,0}, 297da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 2988a381b04SJed Brown {0.75,0.25,0}}, 299da80777bSKarl Rupp At[3][3] = {{0,0,0}, 300da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 301da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 302da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 303da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 304da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 305da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 3060298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2D,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 3078a381b04SJed Brown } 30806db7b1cSJed Brown { /* Optimal for linear implicit part */ 309da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 310da80777bSKarl Rupp const PetscReal 311da80777bSKarl Rupp A[3][3] = {{0,0,0}, 312da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 313da80777bSKarl Rupp {(3-2*1.414213562373095048802)/6,(3+2*1.414213562373095048802)/6,0}}, 314da80777bSKarl Rupp At[3][3] = {{0,0,0}, 315da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 316da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 317da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 318da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 319da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 320da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 3210298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2E,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 322a3a57f36SJed Brown } 3236cf0794eSJed Brown { /* Optimal for linear implicit part */ 3246cf0794eSJed Brown const PetscReal 3256cf0794eSJed Brown A[3][3] = {{0,0,0}, 3266cf0794eSJed Brown {0.5,0,0}, 3276cf0794eSJed Brown {0.5,0.5,0}}, 3286cf0794eSJed Brown At[3][3] = {{0.25,0,0}, 3296cf0794eSJed Brown {0,0.25,0}, 3306cf0794eSJed Brown {1./3,1./3,1./3}}; 3310298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXPRSSP2,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,NULL,NULL,0,NULL,NULL);CHKERRQ(ierr); 3326cf0794eSJed Brown } 333a3a57f36SJed Brown { 334a3a57f36SJed Brown const PetscReal 335a3a57f36SJed Brown A[4][4] = {{0,0,0,0}, 3364040e9f2SJed Brown {1767732205903./2027836641118.,0,0,0}, 3374040e9f2SJed Brown {5535828885825./10492691773637.,788022342437./10882634858940.,0,0}, 3384040e9f2SJed Brown {6485989280629./16251701735622.,-4246266847089./9704473918619.,10755448449292./10357097424841.,0}}, 339a3a57f36SJed Brown At[4][4] = {{0,0,0,0}, 3404040e9f2SJed Brown {1767732205903./4055673282236.,1767732205903./4055673282236.,0,0}, 3414040e9f2SJed Brown {2746238789719./10658868560708.,-640167445237./6845629431997.,1767732205903./4055673282236.,0}, 3424040e9f2SJed Brown {1471266399579./7840856788654.,-4482444167858./7529755066697.,11266239266428./11593286722821.,1767732205903./4055673282236.}}, 343cc46b9d1SJed Brown bembedt[4] = {2756255671327./12835298489170.,-10771552573575./22201958757719.,9247589265047./10645013368117.,2193209047091./5459859503100.}, 3444040e9f2SJed Brown binterpt[4][2] = {{4655552711362./22874653954995., -215264564351./13552729205753.}, 3454040e9f2SJed Brown {-18682724506714./9892148508045.,17870216137069./13817060693119.}, 3464040e9f2SJed Brown {34259539580243./13192909600954.,-28141676662227./17317692491321.}, 3474040e9f2SJed Brown {584795268549./6622622206610., 2508943948391./7218656332882.}}; 3480298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX3,3,4,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 349a3a57f36SJed Brown } 350a3a57f36SJed Brown { 351a3a57f36SJed Brown const PetscReal 352e74514c0SSatish Balay A[5][5] = {{0,0,0,0,0}, 3536cf0794eSJed Brown {1./2,0,0,0,0}, 3546cf0794eSJed Brown {11./18,1./18,0,0,0}, 3556cf0794eSJed Brown {5./6,-5./6,.5,0,0}, 3566cf0794eSJed Brown {1./4,7./4,3./4,-7./4,0}}, 3576cf0794eSJed Brown At[5][5] = {{0,0,0,0,0}, 3586cf0794eSJed Brown {0,1./2,0,0,0}, 3596cf0794eSJed Brown {0,1./6,1./2,0,0}, 3606cf0794eSJed Brown {0,-1./2,1./2,1./2,0}, 361108c343cSJed Brown {0,3./2,-3./2,1./2,1./2}}, 3620298fd71SBarry Smith *bembedt = NULL; 3630298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXARS443,3,5,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,0,NULL,NULL);CHKERRQ(ierr); 3646cf0794eSJed Brown } 3656cf0794eSJed Brown { 3666cf0794eSJed Brown const PetscReal 367e74514c0SSatish Balay A[5][5] = {{0,0,0,0,0}, 3686cf0794eSJed Brown {1,0,0,0,0}, 3696cf0794eSJed Brown {4./9,2./9,0,0,0}, 3706cf0794eSJed Brown {1./4,0,3./4,0,0}, 3716cf0794eSJed Brown {1./4,0,3./5,0,0}}, 372e74514c0SSatish Balay At[5][5] = {{0,0,0,0,0}, 3736cf0794eSJed Brown {.5,.5,0,0,0}, 3746cf0794eSJed Brown {5./18,-1./9,.5,0,0}, 3756cf0794eSJed Brown {.5,0,0,.5,0}, 376108c343cSJed Brown {.25,0,.75,-.5,.5}}, 3770298fd71SBarry Smith *bembedt = NULL; 3780298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXBPR3,3,5,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,0,NULL,NULL);CHKERRQ(ierr); 3796cf0794eSJed Brown } 3806cf0794eSJed Brown { 3816cf0794eSJed Brown const PetscReal 382a3a57f36SJed Brown A[6][6] = {{0,0,0,0,0,0}, 383a3a57f36SJed Brown {1./2,0,0,0,0,0}, 3844040e9f2SJed Brown {13861./62500.,6889./62500.,0,0,0,0}, 3854040e9f2SJed Brown {-116923316275./2393684061468.,-2731218467317./15368042101831.,9408046702089./11113171139209.,0,0,0}, 3864040e9f2SJed Brown {-451086348788./2902428689909.,-2682348792572./7519795681897.,12662868775082./11960479115383.,3355817975965./11060851509271.,0,0}, 3874040e9f2SJed Brown {647845179188./3216320057751.,73281519250./8382639484533.,552539513391./3454668386233.,3354512671639./8306763924573.,4040./17871.,0}}, 388a3a57f36SJed Brown At[6][6] = {{0,0,0,0,0,0}, 389a3a57f36SJed Brown {1./4,1./4,0,0,0,0}, 3904040e9f2SJed Brown {8611./62500.,-1743./31250.,1./4,0,0,0}, 3914040e9f2SJed Brown {5012029./34652500.,-654441./2922500.,174375./388108.,1./4,0,0}, 3924040e9f2SJed Brown {15267082809./155376265600.,-71443401./120774400.,730878875./902184768.,2285395./8070912.,1./4,0}, 3934040e9f2SJed Brown {82889./524892.,0,15625./83664.,69875./102672.,-2260./8211,1./4}}, 394cc46b9d1SJed Brown bembedt[6] = {4586570599./29645900160.,0,178811875./945068544.,814220225./1159782912.,-3700637./11593932.,61727./225920.}, 3954040e9f2SJed Brown binterpt[6][3] = {{6943876665148./7220017795957.,-54480133./30881146.,6818779379841./7100303317025.}, 396cd652676SJed Brown {0,0,0}, 3974040e9f2SJed Brown {7640104374378./9702883013639.,-11436875./14766696.,2173542590792./12501825683035.}, 3984040e9f2SJed Brown {-20649996744609./7521556579894.,174696575./18121608.,-31592104683404./5083833661969.}, 3994040e9f2SJed Brown {8854892464581./2390941311638.,-12120380./966161.,61146701046299./7138195549469.}, 4004040e9f2SJed Brown {-11397109935349./6675773540249.,3843./706.,-17219254887155./4939391667607.}}; 4010298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX4,4,6,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,3,binterpt[0],NULL);CHKERRQ(ierr); 402a3a57f36SJed Brown } 403a3a57f36SJed Brown { 404a3a57f36SJed Brown const PetscReal 405a3a57f36SJed Brown A[8][8] = {{0,0,0,0,0,0,0,0}, 406a3a57f36SJed Brown {41./100,0,0,0,0,0,0,0}, 4074040e9f2SJed Brown {367902744464./2072280473677.,677623207551./8224143866563.,0,0,0,0,0,0}, 4084040e9f2SJed Brown {1268023523408./10340822734521.,0,1029933939417./13636558850479.,0,0,0,0,0}, 4094040e9f2SJed Brown {14463281900351./6315353703477.,0,66114435211212./5879490589093.,-54053170152839./4284798021562.,0,0,0,0}, 4104040e9f2SJed Brown {14090043504691./34967701212078.,0,15191511035443./11219624916014.,-18461159152457./12425892160975.,-281667163811./9011619295870.,0,0,0}, 4114040e9f2SJed Brown {19230459214898./13134317526959.,0,21275331358303./2942455364971.,-38145345988419./4862620318723.,-1./8,-1./8,0,0}, 4124040e9f2SJed Brown {-19977161125411./11928030595625.,0,-40795976796054./6384907823539.,177454434618887./12078138498510.,782672205425./8267701900261.,-69563011059811./9646580694205.,7356628210526./4942186776405.,0}}, 413a3a57f36SJed Brown At[8][8] = {{0,0,0,0,0,0,0,0}, 4144040e9f2SJed Brown {41./200.,41./200.,0,0,0,0,0,0}, 4154040e9f2SJed Brown {41./400.,-567603406766./11931857230679.,41./200.,0,0,0,0,0}, 4164040e9f2SJed Brown {683785636431./9252920307686.,0,-110385047103./1367015193373.,41./200.,0,0,0,0}, 4174040e9f2SJed Brown {3016520224154./10081342136671.,0,30586259806659./12414158314087.,-22760509404356./11113319521817.,41./200.,0,0,0}, 4184040e9f2SJed Brown {218866479029./1489978393911.,0,638256894668./5436446318841.,-1179710474555./5321154724896.,-60928119172./8023461067671.,41./200.,0,0}, 4194040e9f2SJed Brown {1020004230633./5715676835656.,0,25762820946817./25263940353407.,-2161375909145./9755907335909.,-211217309593./5846859502534.,-4269925059573./7827059040749.,41./200,0}, 4204040e9f2SJed Brown {-872700587467./9133579230613.,0,0,22348218063261./9555858737531.,-1143369518992./8141816002931.,-39379526789629./19018526304540.,32727382324388./42900044865799.,41./200.}}, 421cc46b9d1SJed Brown bembedt[8] = {-975461918565./9796059967033.,0,0,78070527104295./32432590147079.,-548382580838./3424219808633.,-33438840321285./15594753105479.,3629800801594./4656183773603.,4035322873751./18575991585200.}, 4224040e9f2SJed Brown binterpt[8][3] = {{-17674230611817./10670229744614., 43486358583215./12773830924787., -9257016797708./5021505065439.}, 423cd652676SJed Brown {0, 0, 0 }, 424cd652676SJed Brown {0, 0, 0 }, 4254040e9f2SJed Brown {65168852399939./7868540260826., -91478233927265./11067650958493., 26096422576131./11239449250142.}, 4264040e9f2SJed Brown {15494834004392./5936557850923., -79368583304911./10890268929626., 92396832856987./20362823103730.}, 4274040e9f2SJed Brown {-99329723586156./26959484932159., -12239297817655./9152339842473., 30029262896817./10175596800299.}, 4284040e9f2SJed Brown {-19024464361622./5461577185407., 115839755401235./10719374521269., -26136350496073./3983972220547.}, 4294040e9f2SJed Brown {-6511271360970./6095937251113., 5843115559534./2180450260947., -5289405421727./3760307252460. }}; 4300298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX5,5,8,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,3,binterpt[0],NULL);CHKERRQ(ierr); 431a3a57f36SJed Brown } 4328a381b04SJed Brown PetscFunctionReturn(0); 4338a381b04SJed Brown } 4348a381b04SJed Brown 4358a381b04SJed Brown #undef __FUNCT__ 4368a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegisterDestroy" 4378a381b04SJed Brown /*@C 4388a381b04SJed Brown TSARKIMEXRegisterDestroy - Frees the list of schemes that were registered by TSARKIMEXRegister(). 4398a381b04SJed Brown 4408a381b04SJed Brown Not Collective 4418a381b04SJed Brown 4428a381b04SJed Brown Level: advanced 4438a381b04SJed Brown 4448a381b04SJed Brown .keywords: TSARKIMEX, register, destroy 445607a6623SBarry Smith .seealso: TSARKIMEXRegister(), TSARKIMEXRegisterAll() 4468a381b04SJed Brown @*/ 4478a381b04SJed Brown PetscErrorCode TSARKIMEXRegisterDestroy(void) 4488a381b04SJed Brown { 4498a381b04SJed Brown PetscErrorCode ierr; 4508a381b04SJed Brown ARKTableauLink link; 4518a381b04SJed Brown 4528a381b04SJed Brown PetscFunctionBegin; 4538a381b04SJed Brown while ((link = ARKTableauList)) { 4548a381b04SJed Brown ARKTableau t = &link->tab; 4558a381b04SJed Brown ARKTableauList = link->next; 4568a381b04SJed Brown ierr = PetscFree6(t->At,t->bt,t->ct,t->A,t->b,t->c);CHKERRQ(ierr); 457108c343cSJed Brown ierr = PetscFree2(t->bembedt,t->bembed);CHKERRQ(ierr); 458cd652676SJed Brown ierr = PetscFree2(t->binterpt,t->binterp);CHKERRQ(ierr); 4598a381b04SJed Brown ierr = PetscFree(t->name);CHKERRQ(ierr); 4608a381b04SJed Brown ierr = PetscFree(link);CHKERRQ(ierr); 4618a381b04SJed Brown } 4628a381b04SJed Brown TSARKIMEXRegisterAllCalled = PETSC_FALSE; 4638a381b04SJed Brown PetscFunctionReturn(0); 4648a381b04SJed Brown } 4658a381b04SJed Brown 4668a381b04SJed Brown #undef __FUNCT__ 4678a381b04SJed Brown #define __FUNCT__ "TSARKIMEXInitializePackage" 4688a381b04SJed Brown /*@C 4698a381b04SJed Brown TSARKIMEXInitializePackage - This function initializes everything in the TSARKIMEX package. It is called 4708a381b04SJed Brown from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_ARKIMEX() 4718a381b04SJed Brown when using static libraries. 4728a381b04SJed Brown 4738a381b04SJed Brown Level: developer 4748a381b04SJed Brown 4758a381b04SJed Brown .keywords: TS, TSARKIMEX, initialize, package 4768a381b04SJed Brown .seealso: PetscInitialize() 4778a381b04SJed Brown @*/ 478607a6623SBarry Smith PetscErrorCode TSARKIMEXInitializePackage(void) 4798a381b04SJed Brown { 4808a381b04SJed Brown PetscErrorCode ierr; 4818a381b04SJed Brown 4828a381b04SJed Brown PetscFunctionBegin; 4838a381b04SJed Brown if (TSARKIMEXPackageInitialized) PetscFunctionReturn(0); 4848a381b04SJed Brown TSARKIMEXPackageInitialized = PETSC_TRUE; 4858a381b04SJed Brown ierr = TSARKIMEXRegisterAll();CHKERRQ(ierr); 486e817cc15SEmil Constantinescu ierr = PetscObjectComposedDataRegister(&explicit_stage_time_id);CHKERRQ(ierr); 4878a381b04SJed Brown ierr = PetscRegisterFinalize(TSARKIMEXFinalizePackage);CHKERRQ(ierr); 4888a381b04SJed Brown PetscFunctionReturn(0); 4898a381b04SJed Brown } 4908a381b04SJed Brown 4918a381b04SJed Brown #undef __FUNCT__ 4928a381b04SJed Brown #define __FUNCT__ "TSARKIMEXFinalizePackage" 4938a381b04SJed Brown /*@C 4948a381b04SJed Brown TSARKIMEXFinalizePackage - This function destroys everything in the TSARKIMEX package. It is 4958a381b04SJed Brown called from PetscFinalize(). 4968a381b04SJed Brown 4978a381b04SJed Brown Level: developer 4988a381b04SJed Brown 4998a381b04SJed Brown .keywords: Petsc, destroy, package 5008a381b04SJed Brown .seealso: PetscFinalize() 5018a381b04SJed Brown @*/ 5028a381b04SJed Brown PetscErrorCode TSARKIMEXFinalizePackage(void) 5038a381b04SJed Brown { 5048a381b04SJed Brown PetscErrorCode ierr; 5058a381b04SJed Brown 5068a381b04SJed Brown PetscFunctionBegin; 5078a381b04SJed Brown TSARKIMEXPackageInitialized = PETSC_FALSE; 5088a381b04SJed Brown ierr = TSARKIMEXRegisterDestroy();CHKERRQ(ierr); 5098a381b04SJed Brown PetscFunctionReturn(0); 5108a381b04SJed Brown } 5118a381b04SJed Brown 5128a381b04SJed Brown #undef __FUNCT__ 5138a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegister" 514cd652676SJed Brown /*@C 515cd652676SJed Brown TSARKIMEXRegister - register an ARK IMEX scheme by providing the entries in the Butcher tableau and optionally embedded approximations and interpolation 516cd652676SJed Brown 517cd652676SJed Brown Not Collective, but the same schemes should be registered on all processes on which they will be used 518cd652676SJed Brown 519cd652676SJed Brown Input Parameters: 520cd652676SJed Brown + name - identifier for method 521cd652676SJed Brown . order - approximation order of method 522cd652676SJed Brown . s - number of stages, this is the dimension of the matrices below 523cd652676SJed Brown . At - Butcher table of stage coefficients for stiff part (dimension s*s, row-major) 5240298fd71SBarry Smith . bt - Butcher table for completing the stiff part of the step (dimension s; NULL to use the last row of At) 5250298fd71SBarry Smith . ct - Abscissa of each stiff stage (dimension s, NULL to use row sums of At) 526cd652676SJed Brown . A - Non-stiff stage coefficients (dimension s*s, row-major) 5270298fd71SBarry Smith . b - Non-stiff step completion table (dimension s; NULL to use last row of At) 5280298fd71SBarry Smith . c - Non-stiff abscissa (dimension s; NULL to use row sums of A) 5290298fd71SBarry Smith . bembedt - Stiff part of completion table for embedded method (dimension s; NULL if not available) 5300298fd71SBarry Smith . bembed - Non-stiff part of completion table for embedded method (dimension s; NULL to use bembedt if provided) 531cd652676SJed Brown . pinterp - Order of the interpolation scheme, equal to the number of columns of binterpt and binterp 532cd652676SJed Brown . binterpt - Coefficients of the interpolation formula for the stiff part (dimension s*pinterp) 5330298fd71SBarry Smith - binterp - Coefficients of the interpolation formula for the non-stiff part (dimension s*pinterp; NULL to reuse binterpt) 534cd652676SJed Brown 535cd652676SJed Brown Notes: 536cd652676SJed Brown Several ARK IMEX methods are provided, this function is only needed to create new methods. 537cd652676SJed Brown 538cd652676SJed Brown Level: advanced 539cd652676SJed Brown 540cd652676SJed Brown .keywords: TS, register 541cd652676SJed Brown 542cd652676SJed Brown .seealso: TSARKIMEX 543cd652676SJed Brown @*/ 54419fd82e9SBarry Smith PetscErrorCode TSARKIMEXRegister(TSARKIMEXType name,PetscInt order,PetscInt s, 5458a381b04SJed Brown const PetscReal At[],const PetscReal bt[],const PetscReal ct[], 546cd652676SJed Brown const PetscReal A[],const PetscReal b[],const PetscReal c[], 547108c343cSJed Brown const PetscReal bembedt[],const PetscReal bembed[], 548cd652676SJed Brown PetscInt pinterp,const PetscReal binterpt[],const PetscReal binterp[]) 5498a381b04SJed Brown { 5508a381b04SJed Brown PetscErrorCode ierr; 5518a381b04SJed Brown ARKTableauLink link; 5528a381b04SJed Brown ARKTableau t; 5538a381b04SJed Brown PetscInt i,j; 5548a381b04SJed Brown 5558a381b04SJed Brown PetscFunctionBegin; 5561795a4d1SJed Brown ierr = PetscCalloc1(1,&link);CHKERRQ(ierr); 5578a381b04SJed Brown t = &link->tab; 5588a381b04SJed Brown ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 5598a381b04SJed Brown t->order = order; 5608a381b04SJed Brown t->s = s; 561dcca6d9dSJed Brown ierr = PetscMalloc6(s*s,&t->At,s,&t->bt,s,&t->ct,s*s,&t->A,s,&t->b,s,&t->c);CHKERRQ(ierr); 5628a381b04SJed Brown ierr = PetscMemcpy(t->At,At,s*s*sizeof(At[0]));CHKERRQ(ierr); 5638a381b04SJed Brown ierr = PetscMemcpy(t->A,A,s*s*sizeof(A[0]));CHKERRQ(ierr); 5648a381b04SJed Brown if (bt) { ierr = PetscMemcpy(t->bt,bt,s*sizeof(bt[0]));CHKERRQ(ierr); } 5658a381b04SJed Brown else for (i=0; i<s; i++) t->bt[i] = At[(s-1)*s+i]; 5668a381b04SJed Brown if (b) { ierr = PetscMemcpy(t->b,b,s*sizeof(b[0]));CHKERRQ(ierr); } 5675dceddf7SDebojyoti Ghosh else for (i=0; i<s; i++) t->b[i] = t->bt[i]; 5688a381b04SJed Brown if (ct) { ierr = PetscMemcpy(t->ct,ct,s*sizeof(ct[0]));CHKERRQ(ierr); } 5698a381b04SJed Brown else for (i=0; i<s; i++) for (j=0,t->ct[i]=0; j<s; j++) t->ct[i] += At[i*s+j]; 5708a381b04SJed Brown if (c) { ierr = PetscMemcpy(t->c,c,s*sizeof(c[0]));CHKERRQ(ierr); } 5718a381b04SJed Brown else for (i=0; i<s; i++) for (j=0,t->c[i]=0; j<s; j++) t->c[i] += A[i*s+j]; 572e817cc15SEmil Constantinescu t->stiffly_accurate = PETSC_TRUE; 573e817cc15SEmil Constantinescu for (i=0; i<s; i++) if (t->At[(s-1)*s+i] != t->bt[i]) t->stiffly_accurate = PETSC_FALSE; 574e817cc15SEmil Constantinescu t->explicit_first_stage = PETSC_TRUE; 575e817cc15SEmil Constantinescu for (i=0; i<s; i++) if (t->At[i] != 0.0) t->explicit_first_stage = PETSC_FALSE; 576e817cc15SEmil Constantinescu /*def of FSAL can be made more precise*/ 5774e9d4bf5SJed Brown t->FSAL_implicit = (PetscBool)(t->explicit_first_stage && t->stiffly_accurate); 578108c343cSJed Brown if (bembedt) { 579dcca6d9dSJed Brown ierr = PetscMalloc2(s,&t->bembedt,s,&t->bembed);CHKERRQ(ierr); 580108c343cSJed Brown ierr = PetscMemcpy(t->bembedt,bembedt,s*sizeof(bembedt[0]));CHKERRQ(ierr); 581108c343cSJed Brown ierr = PetscMemcpy(t->bembed,bembed ? bembed : bembedt,s*sizeof(bembed[0]));CHKERRQ(ierr); 582108c343cSJed Brown } 583108c343cSJed Brown 5844f385281SJed Brown t->pinterp = pinterp; 585dcca6d9dSJed Brown ierr = PetscMalloc2(s*pinterp,&t->binterpt,s*pinterp,&t->binterp);CHKERRQ(ierr); 586cd652676SJed Brown ierr = PetscMemcpy(t->binterpt,binterpt,s*pinterp*sizeof(binterpt[0]));CHKERRQ(ierr); 587cd652676SJed Brown ierr = PetscMemcpy(t->binterp,binterp ? binterp : binterpt,s*pinterp*sizeof(binterpt[0]));CHKERRQ(ierr); 5888a381b04SJed Brown link->next = ARKTableauList; 5898a381b04SJed Brown ARKTableauList = link; 5908a381b04SJed Brown PetscFunctionReturn(0); 5918a381b04SJed Brown } 5928a381b04SJed Brown 5938a381b04SJed Brown #undef __FUNCT__ 594108c343cSJed Brown #define __FUNCT__ "TSEvaluateStep_ARKIMEX" 595108c343cSJed Brown /* 596108c343cSJed Brown The step completion formula is 597108c343cSJed Brown 598108c343cSJed Brown x1 = x0 - h bt^T YdotI + h b^T YdotRHS 599108c343cSJed Brown 600108c343cSJed Brown This function can be called before or after ts->vec_sol has been updated. 601108c343cSJed Brown Suppose we have a completion formula (bt,b) and an embedded formula (bet,be) of different order. 602108c343cSJed Brown We can write 603108c343cSJed Brown 604108c343cSJed Brown x1e = x0 - h bet^T YdotI + h be^T YdotRHS 605108c343cSJed Brown = x1 + h bt^T YdotI - h b^T YdotRHS - h bet^T YdotI + h be^T YdotRHS 606108c343cSJed Brown = x1 - h (bet - bt)^T YdotI + h (be - b)^T YdotRHS 607108c343cSJed Brown 608108c343cSJed Brown so we can evaluate the method with different order even after the step has been optimistically completed. 609108c343cSJed Brown */ 610108c343cSJed Brown static PetscErrorCode TSEvaluateStep_ARKIMEX(TS ts,PetscInt order,Vec X,PetscBool *done) 611108c343cSJed Brown { 612108c343cSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 613108c343cSJed Brown ARKTableau tab = ark->tableau; 614108c343cSJed Brown PetscScalar *w = ark->work; 615108c343cSJed Brown PetscReal h; 616108c343cSJed Brown PetscInt s = tab->s,j; 617108c343cSJed Brown PetscErrorCode ierr; 618108c343cSJed Brown 619108c343cSJed Brown PetscFunctionBegin; 620108c343cSJed Brown switch (ark->status) { 621108c343cSJed Brown case TS_STEP_INCOMPLETE: 622108c343cSJed Brown case TS_STEP_PENDING: 623108c343cSJed Brown h = ts->time_step; break; 624108c343cSJed Brown case TS_STEP_COMPLETE: 625108c343cSJed Brown h = ts->time_step_prev; break; 626ce94432eSBarry Smith default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 627108c343cSJed Brown } 628108c343cSJed Brown if (order == tab->order) { 629e817cc15SEmil Constantinescu if (ark->status == TS_STEP_INCOMPLETE) { 630740132f1SEmil Constantinescu if (!ark->imex && tab->stiffly_accurate) { /* Only the stiffly accurate implicit formula is used */ 631e817cc15SEmil Constantinescu ierr = VecCopy(ark->Y[s-1],X);CHKERRQ(ierr); 632e817cc15SEmil Constantinescu } else { /* Use the standard completion formula (bt,b) */ 633108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 634e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*tab->bt[j]; 635108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotI);CHKERRQ(ierr); 636e817cc15SEmil Constantinescu if (ark->imex) { /* Method is IMEX, complete the explicit formula */ 637108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*tab->b[j]; 638108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 639e817cc15SEmil Constantinescu } 640e817cc15SEmil Constantinescu } 641108c343cSJed Brown } else {ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);} 642108c343cSJed Brown if (done) *done = PETSC_TRUE; 643108c343cSJed Brown PetscFunctionReturn(0); 644108c343cSJed Brown } else if (order == tab->order-1) { 645108c343cSJed Brown if (!tab->bembedt) goto unavailable; 646108c343cSJed Brown if (ark->status == TS_STEP_INCOMPLETE) { /* Complete with the embedded method (bet,be) */ 647108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 648e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*tab->bembedt[j]; 649108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotI);CHKERRQ(ierr); 650108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*tab->bembed[j]; 651108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 652108c343cSJed Brown } else { /* Rollback and re-complete using (bet-be,be-b) */ 653108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 654e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*(tab->bembedt[j] - tab->bt[j]); 655108c343cSJed Brown ierr = VecMAXPY(X,tab->s,w,ark->YdotI);CHKERRQ(ierr); 656108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*(tab->bembed[j] - tab->b[j]); 657108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 658108c343cSJed Brown } 659108c343cSJed Brown if (done) *done = PETSC_TRUE; 660108c343cSJed Brown PetscFunctionReturn(0); 661108c343cSJed Brown } 662108c343cSJed Brown unavailable: 663108c343cSJed Brown if (done) *done = PETSC_FALSE; 664ce94432eSBarry Smith else SETERRQ3(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"ARKIMEX '%s' of order %D cannot evaluate step at order %D",tab->name,tab->order,order); 665108c343cSJed Brown PetscFunctionReturn(0); 666108c343cSJed Brown } 667108c343cSJed Brown 668108c343cSJed Brown #undef __FUNCT__ 66924655328SShri #define __FUNCT__ "TSRollBack_ARKIMEX" 67024655328SShri static PetscErrorCode TSRollBack_ARKIMEX(TS ts) 67124655328SShri { 67224655328SShri TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 67324655328SShri ARKTableau tab = ark->tableau; 67424655328SShri const PetscInt s = tab->s; 67524655328SShri const PetscReal *bt = tab->bt,*b = tab->b; 67624655328SShri PetscScalar *w = ark->work; 67724655328SShri Vec *YdotI = ark->YdotI,*YdotRHS = ark->YdotRHS; 67824655328SShri PetscInt j; 67924655328SShri PetscReal h=ts->time_step; 68024655328SShri PetscErrorCode ierr; 68124655328SShri 68224655328SShri PetscFunctionBegin; 68324655328SShri for (j=0; j<s; j++) w[j] = -h*bt[j]; 68424655328SShri ierr = VecMAXPY(ts->vec_sol,s,w,YdotI);CHKERRQ(ierr); 68524655328SShri for (j=0; j<s; j++) w[j] = -h*b[j]; 68624655328SShri ierr = VecMAXPY(ts->vec_sol,s,w,YdotRHS);CHKERRQ(ierr); 68724655328SShri ark->status = TS_STEP_INCOMPLETE; 68824655328SShri PetscFunctionReturn(0); 68924655328SShri } 69024655328SShri 69124655328SShri #undef __FUNCT__ 6928a381b04SJed Brown #define __FUNCT__ "TSStep_ARKIMEX" 6938a381b04SJed Brown static PetscErrorCode TSStep_ARKIMEX(TS ts) 6948a381b04SJed Brown { 6958a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 6968a381b04SJed Brown ARKTableau tab = ark->tableau; 6978a381b04SJed Brown const PetscInt s = tab->s; 69824655328SShri const PetscReal *At = tab->At,*A = tab->A,*ct = tab->ct,*c = tab->c; 699406d0ec2SJed Brown PetscScalar *w = ark->work; 700e817cc15SEmil Constantinescu Vec *Y = ark->Y,*YdotI = ark->YdotI,*YdotRHS = ark->YdotRHS,Ydot = ark->Ydot,Ydot0 = ark->Ydot0,W = ark->Work,Z = ark->Z; 70156dcabbaSDebojyoti Ghosh PetscBool init_guess_extrp = ark->init_guess_extrp; 702108c343cSJed Brown TSAdapt adapt; 7038a381b04SJed Brown SNES snes; 704108c343cSJed Brown PetscInt i,j,its,lits,reject,next_scheme; 705108c343cSJed Brown PetscReal t; 70624655328SShri PetscReal next_time_step; 707108c343cSJed Brown PetscBool accept; 7088a381b04SJed Brown PetscErrorCode ierr; 7098a381b04SJed Brown 7108a381b04SJed Brown PetscFunctionBegin; 711e817cc15SEmil Constantinescu if (ts->equation_type >= TS_EQ_IMPLICIT && tab->explicit_first_stage) { 712e817cc15SEmil Constantinescu PetscReal valid_time; 713e817cc15SEmil Constantinescu PetscBool isvalid; 71460427346SBarry Smith ierr = PetscObjectComposedDataGetReal((PetscObject)ts->vec_sol,explicit_stage_time_id,valid_time,isvalid);CHKERRQ(ierr); 715e817cc15SEmil Constantinescu if (!isvalid || valid_time != ts->ptime) { 716e817cc15SEmil Constantinescu TS ts_start; 71719436ca2SJed Brown 718*34561852SEmil Constantinescu ierr = TSDuplicate(PetscObjectComm((PetscObject)ts),ts,&ts_start);CHKERRQ(ierr); 719bbd56ea5SKarl Rupp 720e817cc15SEmil Constantinescu ierr = TSSetSolution(ts_start,ts->vec_sol);CHKERRQ(ierr); 721e817cc15SEmil Constantinescu ierr = TSSetTime(ts_start,ts->ptime);CHKERRQ(ierr); 722eb082435SEmil Constantinescu ierr = TSSetDuration(ts_start,1,ts->ptime+ts->time_step);CHKERRQ(ierr); 723740132f1SEmil Constantinescu ierr = TSSetTimeStep(ts_start,ts->time_step);CHKERRQ(ierr); 724e817cc15SEmil Constantinescu ierr = TSSetType(ts_start,TSARKIMEX);CHKERRQ(ierr); 725740132f1SEmil Constantinescu ierr = TSARKIMEXSetFullyImplicit(ts_start,PETSC_TRUE);CHKERRQ(ierr); 726e817cc15SEmil Constantinescu ierr = TSARKIMEXSetType(ts_start,TSARKIMEX1BEE);CHKERRQ(ierr); 727*34561852SEmil Constantinescu 728e817cc15SEmil Constantinescu ierr = TSSolve(ts_start,ts->vec_sol);CHKERRQ(ierr); 729e817cc15SEmil Constantinescu ierr = TSGetTime(ts_start,&ts->ptime);CHKERRQ(ierr); 730bbd56ea5SKarl Rupp 731740132f1SEmil Constantinescu ts->time_step = ts_start->time_step; 732740132f1SEmil Constantinescu ts->steps++; 733e817cc15SEmil Constantinescu ierr = VecCopy(((TS_ARKIMEX*)ts_start->data)->Ydot0,Ydot0);CHKERRQ(ierr); 734*34561852SEmil Constantinescu 735*34561852SEmil Constantinescu ierr = TSDuplicateDestroy(ts,ts_start);CHKERRQ(ierr); 736*34561852SEmil Constantinescu 737e817cc15SEmil Constantinescu } 738e817cc15SEmil Constantinescu } 739e817cc15SEmil Constantinescu 7408a381b04SJed Brown ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 7418a381b04SJed Brown t = ts->ptime; 74224655328SShri next_time_step = ts->time_step; 743108c343cSJed Brown accept = PETSC_TRUE; 744108c343cSJed Brown ark->status = TS_STEP_INCOMPLETE; 7458a381b04SJed Brown 746e817cc15SEmil Constantinescu 74797335746SJed Brown for (reject=0; reject<ts->max_reject && !ts->reason; reject++,ts->reject++) { 748108c343cSJed Brown PetscReal h = ts->time_step; 749b8123daeSJed Brown ierr = TSPreStep(ts);CHKERRQ(ierr); 7508a381b04SJed Brown for (i=0; i<s; i++) { 7519be3e283SDebojyoti Ghosh ark->stage_time = t + h*ct[i]; 7528a381b04SJed Brown if (At[i*s+i] == 0) { /* This stage is explicit */ 7538a381b04SJed Brown ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 754e817cc15SEmil Constantinescu for (j=0; j<i; j++) w[j] = h*At[i*s+j]; 7558a381b04SJed Brown ierr = VecMAXPY(Y[i],i,w,YdotI);CHKERRQ(ierr); 7568a381b04SJed Brown for (j=0; j<i; j++) w[j] = h*A[i*s+j]; 7578a381b04SJed Brown ierr = VecMAXPY(Y[i],i,w,YdotRHS);CHKERRQ(ierr); 7588a381b04SJed Brown } else { 759b296d7d5SJed Brown ark->scoeff = 1./At[i*s+i]; 760b8123daeSJed Brown ierr = TSPreStage(ts,ark->stage_time);CHKERRQ(ierr); 7618a381b04SJed Brown /* Affine part */ 7628a381b04SJed Brown ierr = VecZeroEntries(W);CHKERRQ(ierr); 7638a381b04SJed Brown for (j=0; j<i; j++) w[j] = h*A[i*s+j]; 7648a381b04SJed Brown ierr = VecMAXPY(W,i,w,YdotRHS);CHKERRQ(ierr); 765b296d7d5SJed Brown ierr = VecScale(W, ark->scoeff/h);CHKERRQ(ierr); 766f16577ceSEmil Constantinescu 7678a381b04SJed Brown /* Ydot = shift*(Y-Z) */ 7688a381b04SJed Brown ierr = VecCopy(ts->vec_sol,Z);CHKERRQ(ierr); 769e817cc15SEmil Constantinescu for (j=0; j<i; j++) w[j] = h*At[i*s+j]; 7704f385281SJed Brown ierr = VecMAXPY(Z,i,w,YdotI);CHKERRQ(ierr); 771f16577ceSEmil Constantinescu 7729eef816dSJed Brown if (init_guess_extrp && ark->prev_step_valid) { 77356dcabbaSDebojyoti Ghosh /* Initial guess extrapolated from previous time step stage values */ 77456dcabbaSDebojyoti Ghosh ierr = TSExtrapolate_ARKIMEX(ts,c[i],Y[i]);CHKERRQ(ierr); 77556dcabbaSDebojyoti Ghosh } else { 7768a381b04SJed Brown /* Initial guess taken from last stage */ 7778a381b04SJed Brown ierr = VecCopy(i>0 ? Y[i-1] : ts->vec_sol,Y[i]);CHKERRQ(ierr); 77856dcabbaSDebojyoti Ghosh } 7798a381b04SJed Brown ierr = SNESSolve(snes,W,Y[i]);CHKERRQ(ierr); 7808a381b04SJed Brown ierr = SNESGetIterationNumber(snes,&its);CHKERRQ(ierr); 7818a381b04SJed Brown ierr = SNESGetLinearSolveIterations(snes,&lits);CHKERRQ(ierr); 7825ef26d82SJed Brown ts->snes_its += its; ts->ksp_its += lits; 783552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 78497335746SJed Brown ierr = TSAdaptCheckStage(adapt,ts,&accept);CHKERRQ(ierr); 7851be93e3eSJed Brown if (!accept) { 7861be93e3eSJed Brown /* We are likely rejecting the step because of solver or function domain problems so we should not attempt to 7871be93e3eSJed Brown * use extrapolation to initialize the solves on the next attempt. */ 7881be93e3eSJed Brown ark->prev_step_valid = PETSC_FALSE; 7891be93e3eSJed Brown goto reject_step; 7901be93e3eSJed Brown } 7918a381b04SJed Brown } 7929be3e283SDebojyoti Ghosh ierr = TSPostStage(ts,ark->stage_time,i,Y); CHKERRQ(ierr); 793e817cc15SEmil Constantinescu if (ts->equation_type>=TS_EQ_IMPLICIT) { 794e817cc15SEmil Constantinescu if (i==0 && tab->explicit_first_stage) { 795e817cc15SEmil Constantinescu ierr = VecCopy(Ydot0,YdotI[0]);CHKERRQ(ierr); 796e817cc15SEmil Constantinescu } else { 797e817cc15SEmil Constantinescu ierr = VecAXPBYPCZ(YdotI[i],-ark->scoeff/h,ark->scoeff/h,0,Z,Y[i]);CHKERRQ(ierr); /* Ydot = shift*(X-Z) */ 798e817cc15SEmil Constantinescu } 799e817cc15SEmil Constantinescu } else { 8008a381b04SJed Brown ierr = VecZeroEntries(Ydot);CHKERRQ(ierr); 8014cc180ffSJed Brown ierr = TSComputeIFunction(ts,t+h*ct[i],Y[i],Ydot,YdotI[i],ark->imex);CHKERRQ(ierr); 802e817cc15SEmil Constantinescu ierr = VecScale(YdotI[i], -1.0);CHKERRQ(ierr); 8034cc180ffSJed Brown if (ark->imex) { 8048a381b04SJed Brown ierr = TSComputeRHSFunction(ts,t+h*c[i],Y[i],YdotRHS[i]);CHKERRQ(ierr); 8054cc180ffSJed Brown } else { 8064cc180ffSJed Brown ierr = VecZeroEntries(YdotRHS[i]);CHKERRQ(ierr); 8074cc180ffSJed Brown } 8088a381b04SJed Brown } 809e817cc15SEmil Constantinescu } 8100298fd71SBarry Smith ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 811108c343cSJed Brown ark->status = TS_STEP_PENDING; 8128a381b04SJed Brown 813108c343cSJed Brown /* Register only the current method as a candidate because we're not supporting multiple candidates yet. */ 814552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 815108c343cSJed Brown ierr = TSAdaptCandidatesClear(adapt);CHKERRQ(ierr); 816108c343cSJed Brown ierr = TSAdaptCandidateAdd(adapt,tab->name,tab->order,1,tab->ccfl,1.*tab->s,PETSC_TRUE);CHKERRQ(ierr); 817108c343cSJed Brown ierr = TSAdaptChoose(adapt,ts,ts->time_step,&next_scheme,&next_time_step,&accept);CHKERRQ(ierr); 818108c343cSJed Brown if (accept) { 819108c343cSJed Brown /* ignore next_scheme for now */ 8208a381b04SJed Brown ts->ptime += ts->time_step; 821cdbf8f93SLisandro Dalcin ts->time_step = next_time_step; 8228a381b04SJed Brown ts->steps++; 823e817cc15SEmil Constantinescu if (ts->equation_type>=TS_EQ_IMPLICIT) { /* save the initial slope for the next step*/ 824e817cc15SEmil Constantinescu ierr = VecCopy(YdotI[s-1],Ydot0);CHKERRQ(ierr); 825e817cc15SEmil Constantinescu } 826108c343cSJed Brown ark->status = TS_STEP_COMPLETE; 827e817cc15SEmil Constantinescu if (tab->explicit_first_stage) { 828e817cc15SEmil Constantinescu ierr = PetscObjectComposedDataSetReal((PetscObject)ts->vec_sol,explicit_stage_time_id,ts->ptime);CHKERRQ(ierr); 829e817cc15SEmil Constantinescu } 83064b5d2f7SDebojyoti Ghosh /* Save the Y, YdotI, YdotRHS for extrapolation initial guess */ 83164b5d2f7SDebojyoti Ghosh if (ark->init_guess_extrp) { 83264b5d2f7SDebojyoti Ghosh for (i = 0; i<s; i++) { 83364b5d2f7SDebojyoti Ghosh ierr = VecCopy(Y[i],ark->Y_prev[i]);CHKERRQ(ierr); 83464b5d2f7SDebojyoti Ghosh ierr = VecCopy(YdotRHS[i],ark->YdotRHS_prev[i]);CHKERRQ(ierr); 83564b5d2f7SDebojyoti Ghosh ierr = VecCopy(YdotI[i],ark->YdotI_prev[i]);CHKERRQ(ierr); 83664b5d2f7SDebojyoti Ghosh } 8379eef816dSJed Brown ark->prev_step_valid = PETSC_TRUE; 83864b5d2f7SDebojyoti Ghosh } 839108c343cSJed Brown break; 840108c343cSJed Brown } else { /* Roll back the current step */ 84124655328SShri ts->ptime += next_time_step; /* This will be undone in rollback */ 842108c343cSJed Brown ark->status = TS_STEP_INCOMPLETE; 84324655328SShri ierr = TSRollBack(ts);CHKERRQ(ierr); 844108c343cSJed Brown } 845476b6736SJed Brown reject_step: continue; 846108c343cSJed Brown } 847b2ce242eSJed Brown if (ark->status != TS_STEP_COMPLETE && !ts->reason) ts->reason = TS_DIVERGED_STEP_REJECTED; 8488a381b04SJed Brown PetscFunctionReturn(0); 8498a381b04SJed Brown } 8508a381b04SJed Brown 851cd652676SJed Brown #undef __FUNCT__ 852cd652676SJed Brown #define __FUNCT__ "TSInterpolate_ARKIMEX" 853cd652676SJed Brown static PetscErrorCode TSInterpolate_ARKIMEX(TS ts,PetscReal itime,Vec X) 854cd652676SJed Brown { 855cd652676SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 8564f385281SJed Brown PetscInt s = ark->tableau->s,pinterp = ark->tableau->pinterp,i,j; 857108c343cSJed Brown PetscReal h; 858108c343cSJed Brown PetscReal tt,t; 859cd652676SJed Brown PetscScalar *bt,*b; 860cd652676SJed Brown const PetscReal *Bt = ark->tableau->binterpt,*B = ark->tableau->binterp; 861cd652676SJed Brown PetscErrorCode ierr; 862cd652676SJed Brown 863cd652676SJed Brown PetscFunctionBegin; 864ce94432eSBarry Smith if (!Bt || !B) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSARKIMEX %s does not have an interpolation formula",ark->tableau->name); 865108c343cSJed Brown switch (ark->status) { 866108c343cSJed Brown case TS_STEP_INCOMPLETE: 867108c343cSJed Brown case TS_STEP_PENDING: 868108c343cSJed Brown h = ts->time_step; 869108c343cSJed Brown t = (itime - ts->ptime)/h; 870108c343cSJed Brown break; 871108c343cSJed Brown case TS_STEP_COMPLETE: 872108c343cSJed Brown h = ts->time_step_prev; 873108c343cSJed Brown t = (itime - ts->ptime)/h + 1; /* In the interval [0,1] */ 874108c343cSJed Brown break; 875ce94432eSBarry Smith default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 876108c343cSJed Brown } 877dcca6d9dSJed Brown ierr = PetscMalloc2(s,&bt,s,&b);CHKERRQ(ierr); 878cd652676SJed Brown for (i=0; i<s; i++) bt[i] = b[i] = 0; 8794f385281SJed Brown for (j=0,tt=t; j<pinterp; j++,tt*=t) { 880cd652676SJed Brown for (i=0; i<s; i++) { 881c1758d98SDebojyoti Ghosh bt[i] += h * Bt[i*pinterp+j] * tt; 882108c343cSJed Brown b[i] += h * B[i*pinterp+j] * tt; 883cd652676SJed Brown } 884cd652676SJed Brown } 885cd652676SJed Brown ierr = VecCopy(ark->Y[0],X);CHKERRQ(ierr); 886cd652676SJed Brown ierr = VecMAXPY(X,s,bt,ark->YdotI);CHKERRQ(ierr); 887cd652676SJed Brown ierr = VecMAXPY(X,s,b,ark->YdotRHS);CHKERRQ(ierr); 888cd652676SJed Brown ierr = PetscFree2(bt,b);CHKERRQ(ierr); 889cd652676SJed Brown PetscFunctionReturn(0); 890cd652676SJed Brown } 891cd652676SJed Brown 89256dcabbaSDebojyoti Ghosh #undef __FUNCT__ 89356dcabbaSDebojyoti Ghosh #define __FUNCT__ "TSExtrapolate_ARKIMEX" 89456dcabbaSDebojyoti Ghosh static PetscErrorCode TSExtrapolate_ARKIMEX(TS ts,PetscReal c,Vec X) 89556dcabbaSDebojyoti Ghosh { 89656dcabbaSDebojyoti Ghosh TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 89756dcabbaSDebojyoti Ghosh PetscInt s = ark->tableau->s,pinterp = ark->tableau->pinterp,i,j; 89856dcabbaSDebojyoti Ghosh PetscReal h; 89956dcabbaSDebojyoti Ghosh PetscReal tt,t; 90056dcabbaSDebojyoti Ghosh PetscScalar *bt,*b; 90156dcabbaSDebojyoti Ghosh const PetscReal *Bt = ark->tableau->binterpt,*B = ark->tableau->binterp; 90256dcabbaSDebojyoti Ghosh PetscErrorCode ierr; 90356dcabbaSDebojyoti Ghosh 90456dcabbaSDebojyoti Ghosh PetscFunctionBegin; 90556dcabbaSDebojyoti Ghosh if (!Bt || !B) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSARKIMEX %s does not have an interpolation formula",ark->tableau->name); 90656dcabbaSDebojyoti Ghosh t = 1.0 + (ts->time_step/ts->time_step_prev)*c; 90781d12688SDebojyoti Ghosh h = ts->time_step; 908dcca6d9dSJed Brown ierr = PetscMalloc2(s,&bt,s,&b);CHKERRQ(ierr); 90956dcabbaSDebojyoti Ghosh for (i=0; i<s; i++) bt[i] = b[i] = 0; 91056dcabbaSDebojyoti Ghosh for (j=0,tt=t; j<pinterp; j++,tt*=t) { 91156dcabbaSDebojyoti Ghosh for (i=0; i<s; i++) { 91281d12688SDebojyoti Ghosh bt[i] += h * Bt[i*pinterp+j] * tt; 91356dcabbaSDebojyoti Ghosh b[i] += h * B[i*pinterp+j] * tt; 91456dcabbaSDebojyoti Ghosh } 91556dcabbaSDebojyoti Ghosh } 9169eef816dSJed Brown if (!ark->prev_step_valid) SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"Stages from previous step have not been stored"); 91756dcabbaSDebojyoti Ghosh ierr = VecCopy(ark->Y_prev[0],X);CHKERRQ(ierr); 91856dcabbaSDebojyoti Ghosh ierr = VecMAXPY(X,s,bt,ark->YdotI_prev);CHKERRQ(ierr); 91956dcabbaSDebojyoti Ghosh ierr = VecMAXPY(X,s,b,ark->YdotRHS_prev);CHKERRQ(ierr); 92056dcabbaSDebojyoti Ghosh ierr = PetscFree2(bt,b);CHKERRQ(ierr); 92156dcabbaSDebojyoti Ghosh PetscFunctionReturn(0); 92256dcabbaSDebojyoti Ghosh } 92356dcabbaSDebojyoti Ghosh 9248a381b04SJed Brown /*------------------------------------------------------------*/ 9258a381b04SJed Brown #undef __FUNCT__ 9268a381b04SJed Brown #define __FUNCT__ "TSReset_ARKIMEX" 9278a381b04SJed Brown static PetscErrorCode TSReset_ARKIMEX(TS ts) 9288a381b04SJed Brown { 9298a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 9308a381b04SJed Brown PetscInt s; 9318a381b04SJed Brown PetscErrorCode ierr; 9328a381b04SJed Brown 9338a381b04SJed Brown PetscFunctionBegin; 9348a381b04SJed Brown if (!ark->tableau) PetscFunctionReturn(0); 9358a381b04SJed Brown s = ark->tableau->s; 9368a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->Y);CHKERRQ(ierr); 9378a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->YdotI);CHKERRQ(ierr); 9388a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->YdotRHS);CHKERRQ(ierr); 9390bf495dbSBarry Smith if (ark->init_guess_extrp) { 94056dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->Y_prev);CHKERRQ(ierr); 94156dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->YdotI_prev);CHKERRQ(ierr); 94256dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->YdotRHS_prev);CHKERRQ(ierr); 94356dcabbaSDebojyoti Ghosh } 9448a381b04SJed Brown ierr = VecDestroy(&ark->Ydot);CHKERRQ(ierr); 9458a381b04SJed Brown ierr = VecDestroy(&ark->Work);CHKERRQ(ierr); 946e817cc15SEmil Constantinescu ierr = VecDestroy(&ark->Ydot0);CHKERRQ(ierr); 9478a381b04SJed Brown ierr = VecDestroy(&ark->Z);CHKERRQ(ierr); 9488a381b04SJed Brown ierr = PetscFree(ark->work);CHKERRQ(ierr); 9498a381b04SJed Brown PetscFunctionReturn(0); 9508a381b04SJed Brown } 9518a381b04SJed Brown 9528a381b04SJed Brown #undef __FUNCT__ 9538a381b04SJed Brown #define __FUNCT__ "TSDestroy_ARKIMEX" 9548a381b04SJed Brown static PetscErrorCode TSDestroy_ARKIMEX(TS ts) 9558a381b04SJed Brown { 9568a381b04SJed Brown PetscErrorCode ierr; 9578a381b04SJed Brown 9588a381b04SJed Brown PetscFunctionBegin; 9598a381b04SJed Brown ierr = TSReset_ARKIMEX(ts);CHKERRQ(ierr); 9608a381b04SJed Brown ierr = PetscFree(ts->data);CHKERRQ(ierr); 961bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXGetType_C",NULL);CHKERRQ(ierr); 962bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetType_C",NULL);CHKERRQ(ierr); 963bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetFullyImplicit_C",NULL);CHKERRQ(ierr); 9648a381b04SJed Brown PetscFunctionReturn(0); 9658a381b04SJed Brown } 9668a381b04SJed Brown 967d5e6173cSPeter Brune 968d5e6173cSPeter Brune #undef __FUNCT__ 969d5e6173cSPeter Brune #define __FUNCT__ "TSARKIMEXGetVecs" 970d5e6173cSPeter Brune static PetscErrorCode TSARKIMEXGetVecs(TS ts,DM dm,Vec *Z,Vec *Ydot) 971d5e6173cSPeter Brune { 972d5e6173cSPeter Brune TS_ARKIMEX *ax = (TS_ARKIMEX*)ts->data; 973d5e6173cSPeter Brune PetscErrorCode ierr; 974d5e6173cSPeter Brune 975d5e6173cSPeter Brune PetscFunctionBegin; 976d5e6173cSPeter Brune if (Z) { 977d5e6173cSPeter Brune if (dm && dm != ts->dm) { 978d5e6173cSPeter Brune ierr = DMGetNamedGlobalVector(dm,"TSARKIMEX_Z",Z);CHKERRQ(ierr); 979d5e6173cSPeter Brune } else *Z = ax->Z; 980d5e6173cSPeter Brune } 981d5e6173cSPeter Brune if (Ydot) { 982d5e6173cSPeter Brune if (dm && dm != ts->dm) { 983d5e6173cSPeter Brune ierr = DMGetNamedGlobalVector(dm,"TSARKIMEX_Ydot",Ydot);CHKERRQ(ierr); 984d5e6173cSPeter Brune } else *Ydot = ax->Ydot; 985d5e6173cSPeter Brune } 986d5e6173cSPeter Brune PetscFunctionReturn(0); 987d5e6173cSPeter Brune } 988d5e6173cSPeter Brune 989d5e6173cSPeter Brune 990d5e6173cSPeter Brune #undef __FUNCT__ 991d5e6173cSPeter Brune #define __FUNCT__ "TSARKIMEXRestoreVecs" 992d5e6173cSPeter Brune static PetscErrorCode TSARKIMEXRestoreVecs(TS ts,DM dm,Vec *Z,Vec *Ydot) 993d5e6173cSPeter Brune { 994d5e6173cSPeter Brune PetscErrorCode ierr; 995d5e6173cSPeter Brune 996d5e6173cSPeter Brune PetscFunctionBegin; 997d5e6173cSPeter Brune if (Z) { 998d5e6173cSPeter Brune if (dm && dm != ts->dm) { 999d5e6173cSPeter Brune ierr = DMRestoreNamedGlobalVector(dm,"TSARKIMEX_Z",Z);CHKERRQ(ierr); 1000d5e6173cSPeter Brune } 1001d5e6173cSPeter Brune } 1002d5e6173cSPeter Brune if (Ydot) { 1003d5e6173cSPeter Brune if (dm && dm != ts->dm) { 1004d5e6173cSPeter Brune ierr = DMRestoreNamedGlobalVector(dm,"TSARKIMEX_Ydot",Ydot);CHKERRQ(ierr); 1005d5e6173cSPeter Brune } 1006d5e6173cSPeter Brune } 1007d5e6173cSPeter Brune PetscFunctionReturn(0); 1008d5e6173cSPeter Brune } 1009d5e6173cSPeter Brune 10108a381b04SJed Brown /* 10118a381b04SJed Brown This defines the nonlinear equation that is to be solved with SNES 10128a381b04SJed Brown G(U) = F[t0+Theta*dt, U, (U-U0)*shift] = 0 10138a381b04SJed Brown */ 10148a381b04SJed Brown #undef __FUNCT__ 10158a381b04SJed Brown #define __FUNCT__ "SNESTSFormFunction_ARKIMEX" 10168a381b04SJed Brown static PetscErrorCode SNESTSFormFunction_ARKIMEX(SNES snes,Vec X,Vec F,TS ts) 10178a381b04SJed Brown { 10188a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1019d5e6173cSPeter Brune DM dm,dmsave; 1020d5e6173cSPeter Brune Vec Z,Ydot; 1021b296d7d5SJed Brown PetscReal shift = ark->scoeff / ts->time_step; 10228a381b04SJed Brown PetscErrorCode ierr; 10238a381b04SJed Brown 10248a381b04SJed Brown PetscFunctionBegin; 1025d5e6173cSPeter Brune ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 1026d5e6173cSPeter Brune ierr = TSARKIMEXGetVecs(ts,dm,&Z,&Ydot);CHKERRQ(ierr); 1027b296d7d5SJed Brown ierr = VecAXPBYPCZ(Ydot,-shift,shift,0,Z,X);CHKERRQ(ierr); /* Ydot = shift*(X-Z) */ 1028d5e6173cSPeter Brune dmsave = ts->dm; 1029d5e6173cSPeter Brune ts->dm = dm; 1030740132f1SEmil Constantinescu 1031d5e6173cSPeter Brune ierr = TSComputeIFunction(ts,ark->stage_time,X,Ydot,F,ark->imex);CHKERRQ(ierr); 1032e817cc15SEmil Constantinescu 1033d5e6173cSPeter Brune ts->dm = dmsave; 1034d5e6173cSPeter Brune ierr = TSARKIMEXRestoreVecs(ts,dm,&Z,&Ydot);CHKERRQ(ierr); 10358a381b04SJed Brown PetscFunctionReturn(0); 10368a381b04SJed Brown } 10378a381b04SJed Brown 10388a381b04SJed Brown #undef __FUNCT__ 10398a381b04SJed Brown #define __FUNCT__ "SNESTSFormJacobian_ARKIMEX" 1040d1e9a80fSBarry Smith static PetscErrorCode SNESTSFormJacobian_ARKIMEX(SNES snes,Vec X,Mat A,Mat B,TS ts) 10418a381b04SJed Brown { 10428a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1043d5e6173cSPeter Brune DM dm,dmsave; 1044d5e6173cSPeter Brune Vec Ydot; 1045b296d7d5SJed Brown PetscReal shift = ark->scoeff / ts->time_step; 10468a381b04SJed Brown PetscErrorCode ierr; 10478a381b04SJed Brown 10488a381b04SJed Brown PetscFunctionBegin; 1049d5e6173cSPeter Brune ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 10500298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,dm,NULL,&Ydot);CHKERRQ(ierr); 10518a381b04SJed Brown /* ark->Ydot has already been computed in SNESTSFormFunction_ARKIMEX (SNES guarantees this) */ 1052d5e6173cSPeter Brune dmsave = ts->dm; 1053d5e6173cSPeter Brune ts->dm = dm; 1054740132f1SEmil Constantinescu 1055d1e9a80fSBarry Smith ierr = TSComputeIJacobian(ts,ark->stage_time,X,Ydot,shift,A,B,ark->imex);CHKERRQ(ierr); 1056740132f1SEmil Constantinescu 1057d5e6173cSPeter Brune ts->dm = dmsave; 10580298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,dm,NULL,&Ydot);CHKERRQ(ierr); 1059d5e6173cSPeter Brune PetscFunctionReturn(0); 1060d5e6173cSPeter Brune } 1061d5e6173cSPeter Brune 1062d5e6173cSPeter Brune #undef __FUNCT__ 1063d5e6173cSPeter Brune #define __FUNCT__ "DMCoarsenHook_TSARKIMEX" 1064d5e6173cSPeter Brune static PetscErrorCode DMCoarsenHook_TSARKIMEX(DM fine,DM coarse,void *ctx) 1065d5e6173cSPeter Brune { 1066d5e6173cSPeter Brune PetscFunctionBegin; 1067d5e6173cSPeter Brune PetscFunctionReturn(0); 1068d5e6173cSPeter Brune } 1069d5e6173cSPeter Brune 1070d5e6173cSPeter Brune #undef __FUNCT__ 1071d5e6173cSPeter Brune #define __FUNCT__ "DMRestrictHook_TSARKIMEX" 1072d5e6173cSPeter Brune static PetscErrorCode DMRestrictHook_TSARKIMEX(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 1073d5e6173cSPeter Brune { 1074d5e6173cSPeter Brune TS ts = (TS)ctx; 1075d5e6173cSPeter Brune PetscErrorCode ierr; 1076d5e6173cSPeter Brune Vec Z,Z_c; 1077d5e6173cSPeter Brune 1078d5e6173cSPeter Brune PetscFunctionBegin; 10790298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,fine,&Z,NULL);CHKERRQ(ierr); 10800298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,coarse,&Z_c,NULL);CHKERRQ(ierr); 1081d5e6173cSPeter Brune ierr = MatRestrict(restrct,Z,Z_c);CHKERRQ(ierr); 1082d5e6173cSPeter Brune ierr = VecPointwiseMult(Z_c,rscale,Z_c);CHKERRQ(ierr); 10830298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,fine,&Z,NULL);CHKERRQ(ierr); 10840298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,coarse,&Z_c,NULL);CHKERRQ(ierr); 10858a381b04SJed Brown PetscFunctionReturn(0); 10868a381b04SJed Brown } 10878a381b04SJed Brown 1088cdb298fcSPeter Brune 1089cdb298fcSPeter Brune #undef __FUNCT__ 1090cdb298fcSPeter Brune #define __FUNCT__ "DMSubDomainHook_TSARKIMEX" 1091cdb298fcSPeter Brune static PetscErrorCode DMSubDomainHook_TSARKIMEX(DM dm,DM subdm,void *ctx) 1092cdb298fcSPeter Brune { 1093cdb298fcSPeter Brune PetscFunctionBegin; 1094cdb298fcSPeter Brune PetscFunctionReturn(0); 1095cdb298fcSPeter Brune } 1096cdb298fcSPeter Brune 1097cdb298fcSPeter Brune #undef __FUNCT__ 1098cdb298fcSPeter Brune #define __FUNCT__ "DMSubDomainRestrictHook_TSARKIMEX" 1099cdb298fcSPeter Brune static PetscErrorCode DMSubDomainRestrictHook_TSARKIMEX(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx) 1100cdb298fcSPeter Brune { 1101cdb298fcSPeter Brune TS ts = (TS)ctx; 1102cdb298fcSPeter Brune PetscErrorCode ierr; 1103cdb298fcSPeter Brune Vec Z,Z_c; 1104cdb298fcSPeter Brune 1105cdb298fcSPeter Brune PetscFunctionBegin; 11060298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,dm,&Z,NULL);CHKERRQ(ierr); 11070298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,subdm,&Z_c,NULL);CHKERRQ(ierr); 1108cdb298fcSPeter Brune 1109cdb298fcSPeter Brune ierr = VecScatterBegin(gscat,Z,Z_c,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1110cdb298fcSPeter Brune ierr = VecScatterEnd(gscat,Z,Z_c,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1111cdb298fcSPeter Brune 11120298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,dm,&Z,NULL);CHKERRQ(ierr); 11130298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,subdm,&Z_c,NULL);CHKERRQ(ierr); 1114cdb298fcSPeter Brune PetscFunctionReturn(0); 1115cdb298fcSPeter Brune } 1116cdb298fcSPeter Brune 11178a381b04SJed Brown #undef __FUNCT__ 11188a381b04SJed Brown #define __FUNCT__ "TSSetUp_ARKIMEX" 11198a381b04SJed Brown static PetscErrorCode TSSetUp_ARKIMEX(TS ts) 11208a381b04SJed Brown { 11218a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1122f2c2a1b9SBarry Smith ARKTableau tab; 1123f2c2a1b9SBarry Smith PetscInt s; 11248a381b04SJed Brown PetscErrorCode ierr; 1125d5e6173cSPeter Brune DM dm; 1126f9c1d6abSBarry Smith 11278a381b04SJed Brown PetscFunctionBegin; 11288a381b04SJed Brown if (!ark->tableau) { 1129e24355feSJed Brown ierr = TSARKIMEXSetType(ts,TSARKIMEXDefault);CHKERRQ(ierr); 11308a381b04SJed Brown } 1131f2c2a1b9SBarry Smith tab = ark->tableau; 1132f2c2a1b9SBarry Smith s = tab->s; 11338a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->Y);CHKERRQ(ierr); 11348a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotI);CHKERRQ(ierr); 11358a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotRHS);CHKERRQ(ierr); 113656dcabbaSDebojyoti Ghosh if (ark->init_guess_extrp) { 113756dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->Y_prev);CHKERRQ(ierr); 113856dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotI_prev);CHKERRQ(ierr); 113956dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotRHS_prev);CHKERRQ(ierr); 114056dcabbaSDebojyoti Ghosh } 11418a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Ydot);CHKERRQ(ierr); 11428a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Work);CHKERRQ(ierr); 1143e817cc15SEmil Constantinescu ierr = VecDuplicate(ts->vec_sol,&ark->Ydot0);CHKERRQ(ierr); 11448a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Z);CHKERRQ(ierr); 1145785e854fSJed Brown ierr = PetscMalloc1(s,&ark->work);CHKERRQ(ierr); 1146d5e6173cSPeter Brune ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 1147d5e6173cSPeter Brune if (dm) { 1148d5e6173cSPeter Brune ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSARKIMEX,DMRestrictHook_TSARKIMEX,ts);CHKERRQ(ierr); 1149cdb298fcSPeter Brune ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSARKIMEX,DMSubDomainRestrictHook_TSARKIMEX,ts);CHKERRQ(ierr); 1150d5e6173cSPeter Brune } 11518a381b04SJed Brown PetscFunctionReturn(0); 11528a381b04SJed Brown } 11538a381b04SJed Brown /*------------------------------------------------------------*/ 11548a381b04SJed Brown 11558a381b04SJed Brown #undef __FUNCT__ 11568a381b04SJed Brown #define __FUNCT__ "TSSetFromOptions_ARKIMEX" 11578c34d3f5SBarry Smith static PetscErrorCode TSSetFromOptions_ARKIMEX(PetscOptions *PetscOptionsObject,TS ts) 11588a381b04SJed Brown { 11594cc180ffSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 11608a381b04SJed Brown PetscErrorCode ierr; 11618a381b04SJed Brown char arktype[256]; 11628a381b04SJed Brown 11638a381b04SJed Brown PetscFunctionBegin; 1164e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"ARKIMEX ODE solver options");CHKERRQ(ierr); 11658a381b04SJed Brown { 11668a381b04SJed Brown ARKTableauLink link; 11678a381b04SJed Brown PetscInt count,choice; 11688a381b04SJed Brown PetscBool flg; 11698a381b04SJed Brown const char **namelist; 11708caf3d72SBarry Smith ierr = PetscStrncpy(arktype,TSARKIMEXDefault,sizeof(arktype));CHKERRQ(ierr); 11718a381b04SJed Brown for (link=ARKTableauList,count=0; link; link=link->next,count++) ; 1172785e854fSJed Brown ierr = PetscMalloc1(count,&namelist);CHKERRQ(ierr); 11738a381b04SJed Brown for (link=ARKTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 11748a381b04SJed Brown ierr = PetscOptionsEList("-ts_arkimex_type","Family of ARK IMEX method","TSARKIMEXSetType",(const char*const*)namelist,count,arktype,&choice,&flg);CHKERRQ(ierr); 11758a381b04SJed Brown ierr = TSARKIMEXSetType(ts,flg ? namelist[choice] : arktype);CHKERRQ(ierr); 11768a381b04SJed Brown ierr = PetscFree(namelist);CHKERRQ(ierr); 11774cc180ffSJed Brown flg = (PetscBool) !ark->imex; 11780298fd71SBarry Smith ierr = PetscOptionsBool("-ts_arkimex_fully_implicit","Solve the problem fully implicitly","TSARKIMEXSetFullyImplicit",flg,&flg,NULL);CHKERRQ(ierr); 11794cc180ffSJed Brown ark->imex = (PetscBool) !flg; 118056dcabbaSDebojyoti Ghosh ark->init_guess_extrp = PETSC_FALSE; 118156dcabbaSDebojyoti Ghosh ierr = PetscOptionsBool("-ts_arkimex_initial_guess_extrapolate","Extrapolate the initial guess for the stage solution from stage values of the previous time step","",ark->init_guess_extrp,&ark->init_guess_extrp,NULL);CHKERRQ(ierr); 11828a381b04SJed Brown } 11838a381b04SJed Brown ierr = PetscOptionsTail();CHKERRQ(ierr); 11848a381b04SJed Brown PetscFunctionReturn(0); 11858a381b04SJed Brown } 11868a381b04SJed Brown 11878a381b04SJed Brown #undef __FUNCT__ 11888a381b04SJed Brown #define __FUNCT__ "PetscFormatRealArray" 11898a381b04SJed Brown static PetscErrorCode PetscFormatRealArray(char buf[],size_t len,const char *fmt,PetscInt n,const PetscReal x[]) 11908a381b04SJed Brown { 1191257d2499SJed Brown PetscErrorCode ierr; 1192f1d86077SJed Brown PetscInt i; 1193f1d86077SJed Brown size_t left,count; 11948a381b04SJed Brown char *p; 11958a381b04SJed Brown 11968a381b04SJed Brown PetscFunctionBegin; 1197f1d86077SJed Brown for (i=0,p=buf,left=len; i<n; i++) { 1198f1d86077SJed Brown ierr = PetscSNPrintfCount(p,left,fmt,&count,x[i]);CHKERRQ(ierr); 11998a381b04SJed Brown if (count >= left) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Insufficient space in buffer"); 12008a381b04SJed Brown left -= count; 12018a381b04SJed Brown p += count; 12028a381b04SJed Brown *p++ = ' '; 12038a381b04SJed Brown } 12048a381b04SJed Brown p[i ? 0 : -1] = 0; 12058a381b04SJed Brown PetscFunctionReturn(0); 12068a381b04SJed Brown } 12078a381b04SJed Brown 12088a381b04SJed Brown #undef __FUNCT__ 12098a381b04SJed Brown #define __FUNCT__ "TSView_ARKIMEX" 12108a381b04SJed Brown static PetscErrorCode TSView_ARKIMEX(TS ts,PetscViewer viewer) 12118a381b04SJed Brown { 12128a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 12138a381b04SJed Brown ARKTableau tab = ark->tableau; 12148a381b04SJed Brown PetscBool iascii; 12158a381b04SJed Brown PetscErrorCode ierr; 1216559eea31SJed Brown TSAdapt adapt; 12178a381b04SJed Brown 12188a381b04SJed Brown PetscFunctionBegin; 1219251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 12208a381b04SJed Brown if (iascii) { 122119fd82e9SBarry Smith TSARKIMEXType arktype; 12228a381b04SJed Brown char buf[512]; 12238a381b04SJed Brown ierr = TSARKIMEXGetType(ts,&arktype);CHKERRQ(ierr); 12248a381b04SJed Brown ierr = PetscViewerASCIIPrintf(viewer," ARK IMEX %s\n",arktype);CHKERRQ(ierr); 12258caf3d72SBarry Smith ierr = PetscFormatRealArray(buf,sizeof(buf),"% 8.6f",tab->s,tab->ct);CHKERRQ(ierr); 122631f6fcc0SJed Brown ierr = PetscViewerASCIIPrintf(viewer," Stiff abscissa ct = %s\n",buf);CHKERRQ(ierr); 12278caf3d72SBarry Smith ierr = PetscFormatRealArray(buf,sizeof(buf),"% 8.6f",tab->s,tab->c);CHKERRQ(ierr); 1228e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"Stiffly accurate: %s\n",tab->stiffly_accurate ? "yes" : "no");CHKERRQ(ierr); 1229e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"Explicit first stage: %s\n",tab->explicit_first_stage ? "yes" : "no");CHKERRQ(ierr); 1230e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"FSAL property: %s\n",tab->FSAL_implicit ? "yes" : "no");CHKERRQ(ierr); 123131f6fcc0SJed Brown ierr = PetscViewerASCIIPrintf(viewer," Nonstiff abscissa c = %s\n",buf);CHKERRQ(ierr); 12328a381b04SJed Brown } 1233552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 1234559eea31SJed Brown ierr = TSAdaptView(adapt,viewer);CHKERRQ(ierr); 1235d52bd9f3SBarry Smith ierr = SNESView(ts->snes,viewer);CHKERRQ(ierr); 12368a381b04SJed Brown PetscFunctionReturn(0); 12378a381b04SJed Brown } 12388a381b04SJed Brown 12398a381b04SJed Brown #undef __FUNCT__ 1240f2c2a1b9SBarry Smith #define __FUNCT__ "TSLoad_ARKIMEX" 1241f2c2a1b9SBarry Smith static PetscErrorCode TSLoad_ARKIMEX(TS ts,PetscViewer viewer) 1242f2c2a1b9SBarry Smith { 1243f2c2a1b9SBarry Smith PetscErrorCode ierr; 1244f2c2a1b9SBarry Smith SNES snes; 1245ad6bc421SBarry Smith TSAdapt tsadapt; 1246f2c2a1b9SBarry Smith 1247f2c2a1b9SBarry Smith PetscFunctionBegin; 1248552698daSJed Brown ierr = TSGetAdapt(ts,&tsadapt);CHKERRQ(ierr); 1249ad6bc421SBarry Smith ierr = TSAdaptLoad(tsadapt,viewer);CHKERRQ(ierr); 1250f2c2a1b9SBarry Smith ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 1251f2c2a1b9SBarry Smith ierr = SNESLoad(snes,viewer);CHKERRQ(ierr); 1252ad6bc421SBarry Smith /* function and Jacobian context for SNES when used with TS is always ts object */ 12530298fd71SBarry Smith ierr = SNESSetFunction(snes,NULL,NULL,ts);CHKERRQ(ierr); 12540298fd71SBarry Smith ierr = SNESSetJacobian(snes,NULL,NULL,NULL,ts);CHKERRQ(ierr); 1255f2c2a1b9SBarry Smith PetscFunctionReturn(0); 1256f2c2a1b9SBarry Smith } 1257f2c2a1b9SBarry Smith 1258f2c2a1b9SBarry Smith #undef __FUNCT__ 12598a381b04SJed Brown #define __FUNCT__ "TSARKIMEXSetType" 12608a381b04SJed Brown /*@C 12618a381b04SJed Brown TSARKIMEXSetType - Set the type of ARK IMEX scheme 12628a381b04SJed Brown 12638a381b04SJed Brown Logically collective 12648a381b04SJed Brown 12658a381b04SJed Brown Input Parameter: 12668a381b04SJed Brown + ts - timestepping context 12678a381b04SJed Brown - arktype - type of ARK-IMEX scheme 12688a381b04SJed Brown 12698a381b04SJed Brown Level: intermediate 12708a381b04SJed Brown 1271020d8f30SJed Brown .seealso: TSARKIMEXGetType(), TSARKIMEX, TSARKIMEX2D, TSARKIMEX2E, TSARKIMEXPRSSP2, TSARKIMEX3, TSARKIMEXBPR3, TSARKIMEXARS443, TSARKIMEX4, TSARKIMEX5 12728a381b04SJed Brown @*/ 127319fd82e9SBarry Smith PetscErrorCode TSARKIMEXSetType(TS ts,TSARKIMEXType arktype) 12748a381b04SJed Brown { 12758a381b04SJed Brown PetscErrorCode ierr; 12768a381b04SJed Brown 12778a381b04SJed Brown PetscFunctionBegin; 12788a381b04SJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 127919fd82e9SBarry Smith ierr = PetscTryMethod(ts,"TSARKIMEXSetType_C",(TS,TSARKIMEXType),(ts,arktype));CHKERRQ(ierr); 12808a381b04SJed Brown PetscFunctionReturn(0); 12818a381b04SJed Brown } 12828a381b04SJed Brown 12838a381b04SJed Brown #undef __FUNCT__ 12848a381b04SJed Brown #define __FUNCT__ "TSARKIMEXGetType" 12858a381b04SJed Brown /*@C 12868a381b04SJed Brown TSARKIMEXGetType - Get the type of ARK IMEX scheme 12878a381b04SJed Brown 12888a381b04SJed Brown Logically collective 12898a381b04SJed Brown 12908a381b04SJed Brown Input Parameter: 12918a381b04SJed Brown . ts - timestepping context 12928a381b04SJed Brown 12938a381b04SJed Brown Output Parameter: 12948a381b04SJed Brown . arktype - type of ARK-IMEX scheme 12958a381b04SJed Brown 12968a381b04SJed Brown Level: intermediate 12978a381b04SJed Brown 12988a381b04SJed Brown .seealso: TSARKIMEXGetType() 12998a381b04SJed Brown @*/ 130019fd82e9SBarry Smith PetscErrorCode TSARKIMEXGetType(TS ts,TSARKIMEXType *arktype) 13018a381b04SJed Brown { 13028a381b04SJed Brown PetscErrorCode ierr; 13038a381b04SJed Brown 13048a381b04SJed Brown PetscFunctionBegin; 13058a381b04SJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 130619fd82e9SBarry Smith ierr = PetscUseMethod(ts,"TSARKIMEXGetType_C",(TS,TSARKIMEXType*),(ts,arktype));CHKERRQ(ierr); 13078a381b04SJed Brown PetscFunctionReturn(0); 13088a381b04SJed Brown } 13098a381b04SJed Brown 13104cc180ffSJed Brown #undef __FUNCT__ 13114cc180ffSJed Brown #define __FUNCT__ "TSARKIMEXSetFullyImplicit" 13124cc180ffSJed Brown /*@C 13134cc180ffSJed Brown TSARKIMEXSetFullyImplicit - Solve both parts of the equation implicitly 13144cc180ffSJed Brown 13154cc180ffSJed Brown Logically collective 13164cc180ffSJed Brown 13174cc180ffSJed Brown Input Parameter: 13184cc180ffSJed Brown + ts - timestepping context 13194cc180ffSJed Brown - flg - PETSC_TRUE for fully implicit 13204cc180ffSJed Brown 13214cc180ffSJed Brown Level: intermediate 13224cc180ffSJed Brown 13234cc180ffSJed Brown .seealso: TSARKIMEXGetType() 13244cc180ffSJed Brown @*/ 13254cc180ffSJed Brown PetscErrorCode TSARKIMEXSetFullyImplicit(TS ts,PetscBool flg) 13264cc180ffSJed Brown { 13274cc180ffSJed Brown PetscErrorCode ierr; 13284cc180ffSJed Brown 13294cc180ffSJed Brown PetscFunctionBegin; 13304cc180ffSJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 13314cc180ffSJed Brown ierr = PetscTryMethod(ts,"TSARKIMEXSetFullyImplicit_C",(TS,PetscBool),(ts,flg));CHKERRQ(ierr); 13324cc180ffSJed Brown PetscFunctionReturn(0); 13334cc180ffSJed Brown } 13344cc180ffSJed Brown 13358a381b04SJed Brown #undef __FUNCT__ 13368a381b04SJed Brown #define __FUNCT__ "TSARKIMEXGetType_ARKIMEX" 133719fd82e9SBarry Smith PetscErrorCode TSARKIMEXGetType_ARKIMEX(TS ts,TSARKIMEXType *arktype) 13388a381b04SJed Brown { 13398a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13408a381b04SJed Brown PetscErrorCode ierr; 13418a381b04SJed Brown 13428a381b04SJed Brown PetscFunctionBegin; 1343f2c2a1b9SBarry Smith if (!ark->tableau) { 1344f2c2a1b9SBarry Smith ierr = TSARKIMEXSetType(ts,TSARKIMEXDefault);CHKERRQ(ierr); 1345f2c2a1b9SBarry Smith } 13468a381b04SJed Brown *arktype = ark->tableau->name; 13478a381b04SJed Brown PetscFunctionReturn(0); 13488a381b04SJed Brown } 13498a381b04SJed Brown #undef __FUNCT__ 13508a381b04SJed Brown #define __FUNCT__ "TSARKIMEXSetType_ARKIMEX" 135119fd82e9SBarry Smith PetscErrorCode TSARKIMEXSetType_ARKIMEX(TS ts,TSARKIMEXType arktype) 13528a381b04SJed Brown { 13538a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13548a381b04SJed Brown PetscErrorCode ierr; 13558a381b04SJed Brown PetscBool match; 13568a381b04SJed Brown ARKTableauLink link; 13578a381b04SJed Brown 13588a381b04SJed Brown PetscFunctionBegin; 13598a381b04SJed Brown if (ark->tableau) { 13608a381b04SJed Brown ierr = PetscStrcmp(ark->tableau->name,arktype,&match);CHKERRQ(ierr); 13618a381b04SJed Brown if (match) PetscFunctionReturn(0); 13628a381b04SJed Brown } 13638a381b04SJed Brown for (link = ARKTableauList; link; link=link->next) { 13648a381b04SJed Brown ierr = PetscStrcmp(link->tab.name,arktype,&match);CHKERRQ(ierr); 13658a381b04SJed Brown if (match) { 13668a381b04SJed Brown ierr = TSReset_ARKIMEX(ts);CHKERRQ(ierr); 13678a381b04SJed Brown ark->tableau = &link->tab; 13688a381b04SJed Brown PetscFunctionReturn(0); 13698a381b04SJed Brown } 13708a381b04SJed Brown } 1371ce94432eSBarry Smith SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",arktype); 13728a381b04SJed Brown PetscFunctionReturn(0); 13738a381b04SJed Brown } 13744cc180ffSJed Brown #undef __FUNCT__ 13754cc180ffSJed Brown #define __FUNCT__ "TSARKIMEXSetFullyImplicit_ARKIMEX" 13764cc180ffSJed Brown PetscErrorCode TSARKIMEXSetFullyImplicit_ARKIMEX(TS ts,PetscBool flg) 13774cc180ffSJed Brown { 13784cc180ffSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13794cc180ffSJed Brown 13804cc180ffSJed Brown PetscFunctionBegin; 13814cc180ffSJed Brown ark->imex = (PetscBool)!flg; 13824cc180ffSJed Brown PetscFunctionReturn(0); 13834cc180ffSJed Brown } 13848a381b04SJed Brown 13858a381b04SJed Brown /* ------------------------------------------------------------ */ 13868a381b04SJed Brown /*MC 1387a4386c9eSJed Brown TSARKIMEX - ODE and DAE solver using Additive Runge-Kutta IMEX schemes 13888a381b04SJed Brown 1389fca742c7SJed Brown These methods are intended for problems with well-separated time scales, especially when a slow scale is strongly 1390fca742c7SJed Brown nonlinear such that it is expensive to solve with a fully implicit method. The user should provide the stiff part 1391fca742c7SJed Brown of the equation using TSSetIFunction() and the non-stiff part with TSSetRHSFunction(). 1392fca742c7SJed Brown 1393fca742c7SJed Brown Notes: 1394a4386c9eSJed Brown The default is TSARKIMEX3, it can be changed with TSARKIMEXSetType() or -ts_arkimex_type 1395c8058688SBarry Smith 1396a4386c9eSJed Brown Methods with an explicit stage can only be used with ODE in which the stiff part G(t,X,Xdot) has the form Xdot + Ghat(t,X). 1397fca742c7SJed Brown 1398d0685a90SJed Brown Consider trying TSROSW if the stiff part is linear or weakly nonlinear. 1399d0685a90SJed Brown 14008a381b04SJed Brown Level: beginner 14018a381b04SJed Brown 1402d0685a90SJed Brown .seealso: TSCreate(), TS, TSSetType(), TSARKIMEXSetType(), TSARKIMEXGetType(), TSARKIMEXSetFullyImplicit(), TSARKIMEX1BEE, 1403d0685a90SJed Brown TSARKIMEX2C, TSARKIMEX2D, TSARKIMEX2E, TSARKIMEX3, TSARKIMEXL2, TSARKIMEXA2, TSARKIMEXARS122, 1404d0685a90SJed Brown TSARKIMEX4, TSARKIMEX5, TSARKIMEXPRSSP2, TSARKIMEXARS443, TSARKIMEXBPR3, TSARKIMEXType, TSARKIMEXRegister() 14058a381b04SJed Brown 14068a381b04SJed Brown M*/ 14078a381b04SJed Brown #undef __FUNCT__ 14088a381b04SJed Brown #define __FUNCT__ "TSCreate_ARKIMEX" 14098cc058d9SJed Brown PETSC_EXTERN PetscErrorCode TSCreate_ARKIMEX(TS ts) 14108a381b04SJed Brown { 14118a381b04SJed Brown TS_ARKIMEX *th; 14128a381b04SJed Brown PetscErrorCode ierr; 14138a381b04SJed Brown 14148a381b04SJed Brown PetscFunctionBegin; 1415607a6623SBarry Smith ierr = TSARKIMEXInitializePackage();CHKERRQ(ierr); 14168a381b04SJed Brown 14178a381b04SJed Brown ts->ops->reset = TSReset_ARKIMEX; 14188a381b04SJed Brown ts->ops->destroy = TSDestroy_ARKIMEX; 14198a381b04SJed Brown ts->ops->view = TSView_ARKIMEX; 1420f2c2a1b9SBarry Smith ts->ops->load = TSLoad_ARKIMEX; 14218a381b04SJed Brown ts->ops->setup = TSSetUp_ARKIMEX; 14228a381b04SJed Brown ts->ops->step = TSStep_ARKIMEX; 1423cd652676SJed Brown ts->ops->interpolate = TSInterpolate_ARKIMEX; 1424108c343cSJed Brown ts->ops->evaluatestep = TSEvaluateStep_ARKIMEX; 142524655328SShri ts->ops->rollback = TSRollBack_ARKIMEX; 14268a381b04SJed Brown ts->ops->setfromoptions = TSSetFromOptions_ARKIMEX; 14278a381b04SJed Brown ts->ops->snesfunction = SNESTSFormFunction_ARKIMEX; 14288a381b04SJed Brown ts->ops->snesjacobian = SNESTSFormJacobian_ARKIMEX; 14298a381b04SJed Brown 1430b00a9115SJed Brown ierr = PetscNewLog(ts,&th);CHKERRQ(ierr); 14318a381b04SJed Brown ts->data = (void*)th; 14324cc180ffSJed Brown th->imex = PETSC_TRUE; 14338a381b04SJed Brown 1434bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXGetType_C",TSARKIMEXGetType_ARKIMEX);CHKERRQ(ierr); 1435bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetType_C",TSARKIMEXSetType_ARKIMEX);CHKERRQ(ierr); 1436bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetFullyImplicit_C",TSARKIMEXSetFullyImplicit_ARKIMEX);CHKERRQ(ierr); 14378a381b04SJed Brown PetscFunctionReturn(0); 14388a381b04SJed Brown } 1439