18a381b04SJed Brown /* 28a381b04SJed Brown Code for timestepping with additive Runge-Kutta IMEX method 38a381b04SJed Brown 48a381b04SJed Brown Notes: 58a381b04SJed Brown The general system is written as 68a381b04SJed Brown 7f9c1d6abSBarry Smith F(t,U,Udot) = G(t,U) 88a381b04SJed Brown 98a381b04SJed Brown where F represents the stiff part of the physics and G represents the non-stiff part. 108a381b04SJed Brown 118a381b04SJed Brown */ 12af0996ceSBarry Smith #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 131e25c274SJed Brown #include <petscdm.h> 148a381b04SJed Brown 1519fd82e9SBarry Smith static TSARKIMEXType TSARKIMEXDefault = TSARKIMEX3; 168a381b04SJed Brown static PetscBool TSARKIMEXRegisterAllCalled; 178a381b04SJed Brown static PetscBool TSARKIMEXPackageInitialized; 18e817cc15SEmil Constantinescu static PetscInt explicit_stage_time_id; 1956dcabbaSDebojyoti Ghosh static PetscErrorCode TSExtrapolate_ARKIMEX(TS,PetscReal,Vec); 208a381b04SJed Brown 218a381b04SJed Brown typedef struct _ARKTableau *ARKTableau; 228a381b04SJed Brown struct _ARKTableau { 238a381b04SJed Brown char *name; 244f385281SJed Brown PetscInt order; /* Classical approximation order of the method */ 254f385281SJed Brown PetscInt s; /* Number of stages */ 26e817cc15SEmil Constantinescu PetscBool stiffly_accurate; /* The implicit part is stiffly accurate*/ 27e817cc15SEmil Constantinescu PetscBool FSAL_implicit; /* The implicit part is FSAL*/ 28e817cc15SEmil Constantinescu PetscBool explicit_first_stage; /* The implicit part has an explicit first stage*/ 294f385281SJed Brown PetscInt pinterp; /* Interpolation order */ 304f385281SJed Brown PetscReal *At,*bt,*ct; /* Stiff tableau */ 318a381b04SJed Brown PetscReal *A,*b,*c; /* Non-stiff tableau */ 32108c343cSJed Brown PetscReal *bembedt,*bembed; /* Embedded formula of order one less (order-1) */ 33cd652676SJed Brown PetscReal *binterpt,*binterp; /* Dense output formula */ 34108c343cSJed Brown PetscReal ccfl; /* Placeholder for CFL coefficient relative to forward Euler */ 358a381b04SJed Brown }; 368a381b04SJed Brown typedef struct _ARKTableauLink *ARKTableauLink; 378a381b04SJed Brown struct _ARKTableauLink { 388a381b04SJed Brown struct _ARKTableau tab; 398a381b04SJed Brown ARKTableauLink next; 408a381b04SJed Brown }; 418a381b04SJed Brown static ARKTableauLink ARKTableauList; 428a381b04SJed Brown 438a381b04SJed Brown typedef struct { 448a381b04SJed Brown ARKTableau tableau; 458a381b04SJed Brown Vec *Y; /* States computed during the step */ 468a381b04SJed Brown Vec *YdotI; /* Time derivatives for the stiff part */ 478a381b04SJed Brown Vec *YdotRHS; /* Function evaluations for the non-stiff part */ 489eef816dSJed Brown PetscBool prev_step_valid; /* Stored previous step (Y_prev, YdotI_prev, YdotRHS_prev) is valid */ 4956dcabbaSDebojyoti Ghosh Vec *Y_prev; /* States computed during the previous time step */ 5056dcabbaSDebojyoti Ghosh Vec *YdotI_prev; /* Time derivatives for the stiff part for the previous time step*/ 5156dcabbaSDebojyoti Ghosh Vec *YdotRHS_prev; /* Function evaluations for the non-stiff part for the previous time step*/ 52e817cc15SEmil Constantinescu Vec Ydot0; /* Holds the slope from the previous step in FSAL case */ 538a381b04SJed Brown Vec Ydot; /* Work vector holding Ydot during residual evaluation */ 548a381b04SJed Brown Vec Work; /* Generic work vector */ 558a381b04SJed Brown Vec Z; /* Ydot = shift(Y-Z) */ 568a381b04SJed Brown PetscScalar *work; /* Scalar work */ 57b296d7d5SJed Brown PetscReal scoeff; /* shift = scoeff/dt */ 588a381b04SJed Brown PetscReal stage_time; 594cc180ffSJed Brown PetscBool imex; 6056dcabbaSDebojyoti Ghosh PetscBool init_guess_extrp; /* Extrapolate initial guess from previous time-step stage values */ 61108c343cSJed Brown TSStepStatus status; 628a381b04SJed Brown } TS_ARKIMEX; 631f80e275SEmil Constantinescu /*MC 641f80e275SEmil Constantinescu TSARKIMEXARS122 - Second order ARK IMEX scheme. 658a381b04SJed Brown 661f80e275SEmil Constantinescu This method has one explicit stage and one implicit stage. 671f80e275SEmil Constantinescu 681f80e275SEmil Constantinescu References: 6996a0c994SBarry Smith . 1. - U. Ascher, S. Ruuth, R. J. Spiteri, Implicit explicit Runge Kutta methods for time dependent Partial Differential Equations. Appl. Numer. Math. 25, (1997). 701f80e275SEmil Constantinescu 711f80e275SEmil Constantinescu Level: advanced 721f80e275SEmil Constantinescu 731f80e275SEmil Constantinescu .seealso: TSARKIMEX 741f80e275SEmil Constantinescu M*/ 751f80e275SEmil Constantinescu /*MC 761f80e275SEmil Constantinescu TSARKIMEXA2 - Second order ARK IMEX scheme with A-stable implicit part. 771f80e275SEmil Constantinescu 781f80e275SEmil Constantinescu This method has an explicit stage and one implicit stage, and has an A-stable implicit scheme. This method was provided by Emil Constantinescu. 791f80e275SEmil Constantinescu 801f80e275SEmil Constantinescu Level: advanced 811f80e275SEmil Constantinescu 821f80e275SEmil Constantinescu .seealso: TSARKIMEX 831f80e275SEmil Constantinescu M*/ 841f80e275SEmil Constantinescu /*MC 851f80e275SEmil Constantinescu TSARKIMEXL2 - Second order ARK IMEX scheme with L-stable implicit part. 861f80e275SEmil Constantinescu 871f80e275SEmil Constantinescu This method has two implicit stages, and L-stable implicit scheme. 881f80e275SEmil Constantinescu 891f80e275SEmil Constantinescu References: 9096a0c994SBarry Smith . 1. - L. Pareschi, G. Russo, Implicit Explicit Runge Kutta schemes and applications to hyperbolic systems with relaxations. Journal of Scientific Computing Volume: 25, Issue: 1, October, 2005. 911f80e275SEmil Constantinescu 921f80e275SEmil Constantinescu Level: advanced 931f80e275SEmil Constantinescu 941f80e275SEmil Constantinescu .seealso: TSARKIMEX 951f80e275SEmil Constantinescu M*/ 961f80e275SEmil Constantinescu /*MC 97e817cc15SEmil Constantinescu TSARKIMEX1BEE - First order Backward Euler represented as an ARK IMEX scheme with extrapolation as error estimator. This is a 3-stage method. 98e817cc15SEmil Constantinescu 99e817cc15SEmil Constantinescu This method is aimed at starting the integration of implicit DAEs when explicit first-stage ARK methods are used. 100e817cc15SEmil Constantinescu 101e817cc15SEmil Constantinescu Level: advanced 102e817cc15SEmil Constantinescu 103e817cc15SEmil Constantinescu .seealso: TSARKIMEX 104e817cc15SEmil Constantinescu M*/ 105e817cc15SEmil Constantinescu /*MC 1061f80e275SEmil Constantinescu TSARKIMEX2C - Second order ARK IMEX scheme with L-stable implicit part. 1071f80e275SEmil Constantinescu 1081f80e275SEmil Constantinescu This method has one explicit stage and two implicit stages. The implicit part is the same as in TSARKIMEX2D and TSARKIMEX2E, but the explicit part has a larger stability region on the negative real axis. This method was provided by Emil Constantinescu. 1091f80e275SEmil Constantinescu 1101f80e275SEmil Constantinescu Level: advanced 1111f80e275SEmil Constantinescu 1121f80e275SEmil Constantinescu .seealso: TSARKIMEX 1131f80e275SEmil Constantinescu M*/ 11464f491ddSJed Brown /*MC 11564f491ddSJed Brown TSARKIMEX2D - Second order ARK IMEX scheme with L-stable implicit part. 11664f491ddSJed Brown 117617a39beSEmil Constantinescu This method has one explicit stage and two implicit stages. The stability function is independent of the explicit part in the infinity limit of the implict component. This method was provided by Emil Constantinescu. 11864f491ddSJed Brown 119b330ce4dSSatish Balay Level: advanced 120b330ce4dSSatish Balay 12164f491ddSJed Brown .seealso: TSARKIMEX 12264f491ddSJed Brown M*/ 12364f491ddSJed Brown /*MC 12464f491ddSJed Brown TSARKIMEX2E - Second order ARK IMEX scheme with L-stable implicit part. 12564f491ddSJed Brown 12664f491ddSJed Brown This method has one explicit stage and two implicit stages. It is is an optimal method developed by Emil Constantinescu. 12764f491ddSJed Brown 128b330ce4dSSatish Balay Level: advanced 129b330ce4dSSatish Balay 13064f491ddSJed Brown .seealso: TSARKIMEX 13164f491ddSJed Brown M*/ 13264f491ddSJed Brown /*MC 1336cf0794eSJed Brown TSARKIMEXPRSSP2 - Second order SSP ARK IMEX scheme. 1346cf0794eSJed Brown 1356cf0794eSJed Brown This method has three implicit stages. 1366cf0794eSJed Brown 1376cf0794eSJed Brown References: 13896a0c994SBarry Smith . 1. - L. Pareschi, G. Russo, Implicit Explicit Runge Kutta schemes and applications to hyperbolic systems with relaxations. Journal of Scientific Computing Volume: 25, Issue: 1, October, 2005. 1396cf0794eSJed Brown 1406cf0794eSJed Brown This method is referred to as SSP2-(3,3,2) in http://arxiv.org/abs/1110.4375 1416cf0794eSJed Brown 1426cf0794eSJed Brown Level: advanced 1436cf0794eSJed Brown 1446cf0794eSJed Brown .seealso: TSARKIMEX 1456cf0794eSJed Brown M*/ 1466cf0794eSJed Brown /*MC 14764f491ddSJed Brown TSARKIMEX3 - Third order ARK IMEX scheme with L-stable implicit part. 14864f491ddSJed Brown 14964f491ddSJed Brown This method has one explicit stage and three implicit stages. 15064f491ddSJed Brown 15164f491ddSJed Brown References: 15296a0c994SBarry Smith . 1. - Kennedy and Carpenter 2003. 15364f491ddSJed Brown 154b330ce4dSSatish Balay Level: advanced 155b330ce4dSSatish Balay 15664f491ddSJed Brown .seealso: TSARKIMEX 15764f491ddSJed Brown M*/ 15864f491ddSJed Brown /*MC 1596cf0794eSJed Brown TSARKIMEXARS443 - Third order ARK IMEX scheme. 1606cf0794eSJed Brown 1616cf0794eSJed Brown This method has one explicit stage and four implicit stages. 1626cf0794eSJed Brown 1636cf0794eSJed Brown References: 16496a0c994SBarry Smith + 1. - U. Ascher, S. Ruuth, R. J. Spiteri, Implicit explicit Runge Kutta methods for time dependent Partial Differential Equations. Appl. Numer. Math. 25, (1997). 16596a0c994SBarry Smith - 2. - This method is referred to as ARS(4,4,3) in http://arxiv.org/abs/1110.4375 1666cf0794eSJed Brown 1676cf0794eSJed Brown Level: advanced 1686cf0794eSJed Brown 1696cf0794eSJed Brown .seealso: TSARKIMEX 1706cf0794eSJed Brown M*/ 1716cf0794eSJed Brown /*MC 1726cf0794eSJed Brown TSARKIMEXBPR3 - Third order ARK IMEX scheme. 1736cf0794eSJed Brown 1746cf0794eSJed Brown This method has one explicit stage and four implicit stages. 1756cf0794eSJed Brown 1766cf0794eSJed Brown References: 17796a0c994SBarry Smith . This method is referred to as ARK3 in http://arxiv.org/abs/1110.4375 1786cf0794eSJed Brown 1796cf0794eSJed Brown Level: advanced 1806cf0794eSJed Brown 1816cf0794eSJed Brown .seealso: TSARKIMEX 1826cf0794eSJed Brown M*/ 1836cf0794eSJed Brown /*MC 18464f491ddSJed Brown TSARKIMEX4 - Fourth order ARK IMEX scheme with L-stable implicit part. 18564f491ddSJed Brown 18664f491ddSJed Brown This method has one explicit stage and four implicit stages. 18764f491ddSJed Brown 18864f491ddSJed Brown References: 18996a0c994SBarry Smith . Kennedy and Carpenter 2003. 19064f491ddSJed Brown 191b330ce4dSSatish Balay Level: advanced 192b330ce4dSSatish Balay 19364f491ddSJed Brown .seealso: TSARKIMEX 19464f491ddSJed Brown M*/ 19564f491ddSJed Brown /*MC 19664f491ddSJed Brown TSARKIMEX5 - Fifth order ARK IMEX scheme with L-stable implicit part. 19764f491ddSJed Brown 19864f491ddSJed Brown This method has one explicit stage and five implicit stages. 19964f491ddSJed Brown 20064f491ddSJed Brown References: 20196a0c994SBarry Smith . Kennedy and Carpenter 2003. 20264f491ddSJed Brown 203b330ce4dSSatish Balay Level: advanced 204b330ce4dSSatish Balay 20564f491ddSJed Brown .seealso: TSARKIMEX 20664f491ddSJed Brown M*/ 20764f491ddSJed Brown 2088a381b04SJed Brown #undef __FUNCT__ 2098a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegisterAll" 2108a381b04SJed Brown /*@C 2118a381b04SJed Brown TSARKIMEXRegisterAll - Registers all of the additive Runge-Kutta implicit-explicit methods in TSARKIMEX 2128a381b04SJed Brown 213fca742c7SJed Brown Not Collective, but should be called by all processes which will need the schemes to be registered 2148a381b04SJed Brown 2158a381b04SJed Brown Level: advanced 2168a381b04SJed Brown 2178a381b04SJed Brown .keywords: TS, TSARKIMEX, register, all 2188a381b04SJed Brown 2198a381b04SJed Brown .seealso: TSARKIMEXRegisterDestroy() 2208a381b04SJed Brown @*/ 2218a381b04SJed Brown PetscErrorCode TSARKIMEXRegisterAll(void) 2228a381b04SJed Brown { 2238a381b04SJed Brown PetscErrorCode ierr; 2248a381b04SJed Brown 2258a381b04SJed Brown PetscFunctionBegin; 2268a381b04SJed Brown if (TSARKIMEXRegisterAllCalled) PetscFunctionReturn(0); 2278a381b04SJed Brown TSARKIMEXRegisterAllCalled = PETSC_TRUE; 228e817cc15SEmil Constantinescu 229e817cc15SEmil Constantinescu { 230e817cc15SEmil Constantinescu const PetscReal 231e817cc15SEmil Constantinescu A[3][3] = {{0.0,0.0,0.0}, 232e817cc15SEmil Constantinescu {0.0,0.0,0.0}, 233748ad121SEmil Constantinescu {0.0,0.5,0.0}}, 234e817cc15SEmil Constantinescu At[3][3] = {{1.0,0.0,0.0}, 235e817cc15SEmil Constantinescu {0.0,0.5,0.0}, 236e817cc15SEmil Constantinescu {0.0,0.5,0.5}}, 237e817cc15SEmil Constantinescu b[3] = {0.0,0.5,0.5}, 238e817cc15SEmil Constantinescu bembedt[3] = {1.0,0.0,0.0}; 2390298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX1BEE,2,3,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 240e817cc15SEmil Constantinescu } 2418a381b04SJed Brown { 2428a381b04SJed Brown const PetscReal 2431f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2441f80e275SEmil Constantinescu {0.5,0.0}}, 2451f80e275SEmil Constantinescu At[2][2] = {{0.0,0.0}, 2461f80e275SEmil Constantinescu {0.0,0.5}}, 2471f80e275SEmil Constantinescu b[2] = {0.0,1.0}, 2481f80e275SEmil Constantinescu bembedt[2] = {0.5,0.5}; 2491f80e275SEmil Constantinescu /* binterpt[2][2] = {{1.0,-1.0},{0.0,1.0}}; second order dense output has poor stability properties and hence it is not currently in use*/ 2500298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXARS122,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 2511f80e275SEmil Constantinescu } 2521f80e275SEmil Constantinescu { 2531f80e275SEmil Constantinescu const PetscReal 2541f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2551f80e275SEmil Constantinescu {1.0,0.0}}, 2561f80e275SEmil Constantinescu At[2][2] = {{0.0,0.0}, 2571f80e275SEmil Constantinescu {0.5,0.5}}, 2581f80e275SEmil Constantinescu b[2] = {0.5,0.5}, 2591f80e275SEmil Constantinescu bembedt[2] = {0.0,1.0}; 2601f80e275SEmil Constantinescu /* binterpt[2][2] = {{1.0,-0.5},{0.0,0.5}} second order dense output has poor stability properties and hence it is not currently in use*/ 2610298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXA2,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,1,b,NULL);CHKERRQ(ierr); 2621f80e275SEmil Constantinescu } 2631f80e275SEmil Constantinescu { 264da80777bSKarl Rupp /* const PetscReal us2 = 1.0-1.0/PetscSqrtReal((PetscReal)2.0); Direct evaluation: 0.2928932188134524755992. Used below to ensure all values are available at compile time */ 2651f80e275SEmil Constantinescu const PetscReal 2661f80e275SEmil Constantinescu A[2][2] = {{0.0,0.0}, 2671f80e275SEmil Constantinescu {1.0,0.0}}, 268da80777bSKarl Rupp At[2][2] = {{0.2928932188134524755992,0.0}, 269da80777bSKarl Rupp {1.0-2.0*0.2928932188134524755992,0.2928932188134524755992}}, 2701f80e275SEmil Constantinescu b[2] = {0.5,0.5}, 2711f80e275SEmil Constantinescu bembedt[2] = {0.0,1.0}, 272da80777bSKarl Rupp binterpt[2][2] = {{ (0.2928932188134524755992-1.0)/(2.0*0.2928932188134524755992-1.0),-1/(2.0*(1.0-2.0*0.2928932188134524755992))}, 273da80777bSKarl Rupp {1-(0.2928932188134524755992-1.0)/(2.0*0.2928932188134524755992-1.0),-1/(2.0*(1.0-2.0*0.2928932188134524755992))}}, 2741f80e275SEmil Constantinescu binterp[2][2] = {{1.0,-0.5},{0.0,0.5}}; 2750298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXL2,2,2,&At[0][0],b,NULL,&A[0][0],b,NULL,bembedt,bembedt,2,binterpt[0],binterp[0]);CHKERRQ(ierr); 2761f80e275SEmil Constantinescu } 2771f80e275SEmil Constantinescu { 278da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 279da80777bSKarl Rupp const PetscReal 2808a381b04SJed Brown A[3][3] = {{0,0,0}, 281da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 282617a39beSEmil Constantinescu {0.5,0.5,0}}, 283da80777bSKarl Rupp At[3][3] = {{0,0,0}, 284da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 285da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 286da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 287da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 288da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 289da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 2900298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2C,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 2911f80e275SEmil Constantinescu } 2921f80e275SEmil Constantinescu { 293da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 294da80777bSKarl Rupp const PetscReal 2951f80e275SEmil Constantinescu A[3][3] = {{0,0,0}, 296da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 2978a381b04SJed Brown {0.75,0.25,0}}, 298da80777bSKarl Rupp At[3][3] = {{0,0,0}, 299da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 300da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 301da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 302da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 303da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 304da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 3050298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2D,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 3068a381b04SJed Brown } 30706db7b1cSJed Brown { /* Optimal for linear implicit part */ 308da80777bSKarl Rupp /* const PetscReal s2 = PetscSqrtReal((PetscReal)2.0), Direct evaluation: 1.414213562373095048802. Used below to ensure all values are available at compile time */ 309da80777bSKarl Rupp const PetscReal 310da80777bSKarl Rupp A[3][3] = {{0,0,0}, 311da80777bSKarl Rupp {2-1.414213562373095048802,0,0}, 312da80777bSKarl Rupp {(3-2*1.414213562373095048802)/6,(3+2*1.414213562373095048802)/6,0}}, 313da80777bSKarl Rupp At[3][3] = {{0,0,0}, 314da80777bSKarl Rupp {1-1/1.414213562373095048802,1-1/1.414213562373095048802,0}, 315da80777bSKarl Rupp {1/(2*1.414213562373095048802),1/(2*1.414213562373095048802),1-1/1.414213562373095048802}}, 316da80777bSKarl Rupp bembedt[3] = {(4.-1.414213562373095048802)/8.,(4.-1.414213562373095048802)/8.,1/(2.*1.414213562373095048802)}, 317da80777bSKarl Rupp binterpt[3][2] = {{1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 318da80777bSKarl Rupp {1.0/1.414213562373095048802,-1.0/(2.0*1.414213562373095048802)}, 319da80777bSKarl Rupp {1.0-1.414213562373095048802,1.0/1.414213562373095048802}}; 3200298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX2E,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 321a3a57f36SJed Brown } 3226cf0794eSJed Brown { /* Optimal for linear implicit part */ 3236cf0794eSJed Brown const PetscReal 3246cf0794eSJed Brown A[3][3] = {{0,0,0}, 3256cf0794eSJed Brown {0.5,0,0}, 3266cf0794eSJed Brown {0.5,0.5,0}}, 3276cf0794eSJed Brown At[3][3] = {{0.25,0,0}, 3286cf0794eSJed Brown {0,0.25,0}, 3296cf0794eSJed Brown {1./3,1./3,1./3}}; 3300298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXPRSSP2,2,3,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,NULL,NULL,0,NULL,NULL);CHKERRQ(ierr); 3316cf0794eSJed Brown } 332a3a57f36SJed Brown { 333a3a57f36SJed Brown const PetscReal 334a3a57f36SJed Brown A[4][4] = {{0,0,0,0}, 3354040e9f2SJed Brown {1767732205903./2027836641118.,0,0,0}, 3364040e9f2SJed Brown {5535828885825./10492691773637.,788022342437./10882634858940.,0,0}, 3374040e9f2SJed Brown {6485989280629./16251701735622.,-4246266847089./9704473918619.,10755448449292./10357097424841.,0}}, 338a3a57f36SJed Brown At[4][4] = {{0,0,0,0}, 3394040e9f2SJed Brown {1767732205903./4055673282236.,1767732205903./4055673282236.,0,0}, 3404040e9f2SJed Brown {2746238789719./10658868560708.,-640167445237./6845629431997.,1767732205903./4055673282236.,0}, 3414040e9f2SJed Brown {1471266399579./7840856788654.,-4482444167858./7529755066697.,11266239266428./11593286722821.,1767732205903./4055673282236.}}, 342cc46b9d1SJed Brown bembedt[4] = {2756255671327./12835298489170.,-10771552573575./22201958757719.,9247589265047./10645013368117.,2193209047091./5459859503100.}, 3434040e9f2SJed Brown binterpt[4][2] = {{4655552711362./22874653954995., -215264564351./13552729205753.}, 3444040e9f2SJed Brown {-18682724506714./9892148508045.,17870216137069./13817060693119.}, 3454040e9f2SJed Brown {34259539580243./13192909600954.,-28141676662227./17317692491321.}, 3464040e9f2SJed Brown {584795268549./6622622206610., 2508943948391./7218656332882.}}; 3470298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX3,3,4,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,2,binterpt[0],NULL);CHKERRQ(ierr); 348a3a57f36SJed Brown } 349a3a57f36SJed Brown { 350a3a57f36SJed Brown const PetscReal 351e74514c0SSatish Balay A[5][5] = {{0,0,0,0,0}, 3526cf0794eSJed Brown {1./2,0,0,0,0}, 3536cf0794eSJed Brown {11./18,1./18,0,0,0}, 3546cf0794eSJed Brown {5./6,-5./6,.5,0,0}, 3556cf0794eSJed Brown {1./4,7./4,3./4,-7./4,0}}, 3566cf0794eSJed Brown At[5][5] = {{0,0,0,0,0}, 3576cf0794eSJed Brown {0,1./2,0,0,0}, 3586cf0794eSJed Brown {0,1./6,1./2,0,0}, 3596cf0794eSJed Brown {0,-1./2,1./2,1./2,0}, 360108c343cSJed Brown {0,3./2,-3./2,1./2,1./2}}, 3610298fd71SBarry Smith *bembedt = NULL; 3620298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXARS443,3,5,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,0,NULL,NULL);CHKERRQ(ierr); 3636cf0794eSJed Brown } 3646cf0794eSJed Brown { 3656cf0794eSJed Brown const PetscReal 366e74514c0SSatish Balay A[5][5] = {{0,0,0,0,0}, 3676cf0794eSJed Brown {1,0,0,0,0}, 3686cf0794eSJed Brown {4./9,2./9,0,0,0}, 3696cf0794eSJed Brown {1./4,0,3./4,0,0}, 3706cf0794eSJed Brown {1./4,0,3./5,0,0}}, 371e74514c0SSatish Balay At[5][5] = {{0,0,0,0,0}, 3726cf0794eSJed Brown {.5,.5,0,0,0}, 3736cf0794eSJed Brown {5./18,-1./9,.5,0,0}, 3746cf0794eSJed Brown {.5,0,0,.5,0}, 375108c343cSJed Brown {.25,0,.75,-.5,.5}}, 3760298fd71SBarry Smith *bembedt = NULL; 3770298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEXBPR3,3,5,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,0,NULL,NULL);CHKERRQ(ierr); 3786cf0794eSJed Brown } 3796cf0794eSJed Brown { 3806cf0794eSJed Brown const PetscReal 381a3a57f36SJed Brown A[6][6] = {{0,0,0,0,0,0}, 382a3a57f36SJed Brown {1./2,0,0,0,0,0}, 3834040e9f2SJed Brown {13861./62500.,6889./62500.,0,0,0,0}, 3844040e9f2SJed Brown {-116923316275./2393684061468.,-2731218467317./15368042101831.,9408046702089./11113171139209.,0,0,0}, 3854040e9f2SJed Brown {-451086348788./2902428689909.,-2682348792572./7519795681897.,12662868775082./11960479115383.,3355817975965./11060851509271.,0,0}, 3864040e9f2SJed Brown {647845179188./3216320057751.,73281519250./8382639484533.,552539513391./3454668386233.,3354512671639./8306763924573.,4040./17871.,0}}, 387a3a57f36SJed Brown At[6][6] = {{0,0,0,0,0,0}, 388a3a57f36SJed Brown {1./4,1./4,0,0,0,0}, 3894040e9f2SJed Brown {8611./62500.,-1743./31250.,1./4,0,0,0}, 3904040e9f2SJed Brown {5012029./34652500.,-654441./2922500.,174375./388108.,1./4,0,0}, 3914040e9f2SJed Brown {15267082809./155376265600.,-71443401./120774400.,730878875./902184768.,2285395./8070912.,1./4,0}, 3924040e9f2SJed Brown {82889./524892.,0,15625./83664.,69875./102672.,-2260./8211,1./4}}, 393cc46b9d1SJed Brown bembedt[6] = {4586570599./29645900160.,0,178811875./945068544.,814220225./1159782912.,-3700637./11593932.,61727./225920.}, 3944040e9f2SJed Brown binterpt[6][3] = {{6943876665148./7220017795957.,-54480133./30881146.,6818779379841./7100303317025.}, 395cd652676SJed Brown {0,0,0}, 3964040e9f2SJed Brown {7640104374378./9702883013639.,-11436875./14766696.,2173542590792./12501825683035.}, 3974040e9f2SJed Brown {-20649996744609./7521556579894.,174696575./18121608.,-31592104683404./5083833661969.}, 3984040e9f2SJed Brown {8854892464581./2390941311638.,-12120380./966161.,61146701046299./7138195549469.}, 3994040e9f2SJed Brown {-11397109935349./6675773540249.,3843./706.,-17219254887155./4939391667607.}}; 4000298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX4,4,6,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,3,binterpt[0],NULL);CHKERRQ(ierr); 401a3a57f36SJed Brown } 402a3a57f36SJed Brown { 403a3a57f36SJed Brown const PetscReal 404a3a57f36SJed Brown A[8][8] = {{0,0,0,0,0,0,0,0}, 405a3a57f36SJed Brown {41./100,0,0,0,0,0,0,0}, 4064040e9f2SJed Brown {367902744464./2072280473677.,677623207551./8224143866563.,0,0,0,0,0,0}, 4074040e9f2SJed Brown {1268023523408./10340822734521.,0,1029933939417./13636558850479.,0,0,0,0,0}, 4084040e9f2SJed Brown {14463281900351./6315353703477.,0,66114435211212./5879490589093.,-54053170152839./4284798021562.,0,0,0,0}, 4094040e9f2SJed Brown {14090043504691./34967701212078.,0,15191511035443./11219624916014.,-18461159152457./12425892160975.,-281667163811./9011619295870.,0,0,0}, 4104040e9f2SJed Brown {19230459214898./13134317526959.,0,21275331358303./2942455364971.,-38145345988419./4862620318723.,-1./8,-1./8,0,0}, 4114040e9f2SJed Brown {-19977161125411./11928030595625.,0,-40795976796054./6384907823539.,177454434618887./12078138498510.,782672205425./8267701900261.,-69563011059811./9646580694205.,7356628210526./4942186776405.,0}}, 412a3a57f36SJed Brown At[8][8] = {{0,0,0,0,0,0,0,0}, 4134040e9f2SJed Brown {41./200.,41./200.,0,0,0,0,0,0}, 4144040e9f2SJed Brown {41./400.,-567603406766./11931857230679.,41./200.,0,0,0,0,0}, 4154040e9f2SJed Brown {683785636431./9252920307686.,0,-110385047103./1367015193373.,41./200.,0,0,0,0}, 4164040e9f2SJed Brown {3016520224154./10081342136671.,0,30586259806659./12414158314087.,-22760509404356./11113319521817.,41./200.,0,0,0}, 4174040e9f2SJed Brown {218866479029./1489978393911.,0,638256894668./5436446318841.,-1179710474555./5321154724896.,-60928119172./8023461067671.,41./200.,0,0}, 4184040e9f2SJed Brown {1020004230633./5715676835656.,0,25762820946817./25263940353407.,-2161375909145./9755907335909.,-211217309593./5846859502534.,-4269925059573./7827059040749.,41./200,0}, 4194040e9f2SJed Brown {-872700587467./9133579230613.,0,0,22348218063261./9555858737531.,-1143369518992./8141816002931.,-39379526789629./19018526304540.,32727382324388./42900044865799.,41./200.}}, 420cc46b9d1SJed Brown bembedt[8] = {-975461918565./9796059967033.,0,0,78070527104295./32432590147079.,-548382580838./3424219808633.,-33438840321285./15594753105479.,3629800801594./4656183773603.,4035322873751./18575991585200.}, 4214040e9f2SJed Brown binterpt[8][3] = {{-17674230611817./10670229744614., 43486358583215./12773830924787., -9257016797708./5021505065439.}, 422cd652676SJed Brown {0, 0, 0 }, 423cd652676SJed Brown {0, 0, 0 }, 4244040e9f2SJed Brown {65168852399939./7868540260826., -91478233927265./11067650958493., 26096422576131./11239449250142.}, 4254040e9f2SJed Brown {15494834004392./5936557850923., -79368583304911./10890268929626., 92396832856987./20362823103730.}, 4264040e9f2SJed Brown {-99329723586156./26959484932159., -12239297817655./9152339842473., 30029262896817./10175596800299.}, 4274040e9f2SJed Brown {-19024464361622./5461577185407., 115839755401235./10719374521269., -26136350496073./3983972220547.}, 4284040e9f2SJed Brown {-6511271360970./6095937251113., 5843115559534./2180450260947., -5289405421727./3760307252460. }}; 4290298fd71SBarry Smith ierr = TSARKIMEXRegister(TSARKIMEX5,5,8,&At[0][0],NULL,NULL,&A[0][0],NULL,NULL,bembedt,bembedt,3,binterpt[0],NULL);CHKERRQ(ierr); 430a3a57f36SJed Brown } 4318a381b04SJed Brown PetscFunctionReturn(0); 4328a381b04SJed Brown } 4338a381b04SJed Brown 4348a381b04SJed Brown #undef __FUNCT__ 4358a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegisterDestroy" 4368a381b04SJed Brown /*@C 4378a381b04SJed Brown TSARKIMEXRegisterDestroy - Frees the list of schemes that were registered by TSARKIMEXRegister(). 4388a381b04SJed Brown 4398a381b04SJed Brown Not Collective 4408a381b04SJed Brown 4418a381b04SJed Brown Level: advanced 4428a381b04SJed Brown 4438a381b04SJed Brown .keywords: TSARKIMEX, register, destroy 444607a6623SBarry Smith .seealso: TSARKIMEXRegister(), TSARKIMEXRegisterAll() 4458a381b04SJed Brown @*/ 4468a381b04SJed Brown PetscErrorCode TSARKIMEXRegisterDestroy(void) 4478a381b04SJed Brown { 4488a381b04SJed Brown PetscErrorCode ierr; 4498a381b04SJed Brown ARKTableauLink link; 4508a381b04SJed Brown 4518a381b04SJed Brown PetscFunctionBegin; 4528a381b04SJed Brown while ((link = ARKTableauList)) { 4538a381b04SJed Brown ARKTableau t = &link->tab; 4548a381b04SJed Brown ARKTableauList = link->next; 4558a381b04SJed Brown ierr = PetscFree6(t->At,t->bt,t->ct,t->A,t->b,t->c);CHKERRQ(ierr); 456108c343cSJed Brown ierr = PetscFree2(t->bembedt,t->bembed);CHKERRQ(ierr); 457cd652676SJed Brown ierr = PetscFree2(t->binterpt,t->binterp);CHKERRQ(ierr); 4588a381b04SJed Brown ierr = PetscFree(t->name);CHKERRQ(ierr); 4598a381b04SJed Brown ierr = PetscFree(link);CHKERRQ(ierr); 4608a381b04SJed Brown } 4618a381b04SJed Brown TSARKIMEXRegisterAllCalled = PETSC_FALSE; 4628a381b04SJed Brown PetscFunctionReturn(0); 4638a381b04SJed Brown } 4648a381b04SJed Brown 4658a381b04SJed Brown #undef __FUNCT__ 4668a381b04SJed Brown #define __FUNCT__ "TSARKIMEXInitializePackage" 4678a381b04SJed Brown /*@C 4688a381b04SJed Brown TSARKIMEXInitializePackage - This function initializes everything in the TSARKIMEX package. It is called 4698a381b04SJed Brown from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_ARKIMEX() 4708a381b04SJed Brown when using static libraries. 4718a381b04SJed Brown 4728a381b04SJed Brown Level: developer 4738a381b04SJed Brown 4748a381b04SJed Brown .keywords: TS, TSARKIMEX, initialize, package 4758a381b04SJed Brown .seealso: PetscInitialize() 4768a381b04SJed Brown @*/ 477607a6623SBarry Smith PetscErrorCode TSARKIMEXInitializePackage(void) 4788a381b04SJed Brown { 4798a381b04SJed Brown PetscErrorCode ierr; 4808a381b04SJed Brown 4818a381b04SJed Brown PetscFunctionBegin; 4828a381b04SJed Brown if (TSARKIMEXPackageInitialized) PetscFunctionReturn(0); 4838a381b04SJed Brown TSARKIMEXPackageInitialized = PETSC_TRUE; 4848a381b04SJed Brown ierr = TSARKIMEXRegisterAll();CHKERRQ(ierr); 485e817cc15SEmil Constantinescu ierr = PetscObjectComposedDataRegister(&explicit_stage_time_id);CHKERRQ(ierr); 4868a381b04SJed Brown ierr = PetscRegisterFinalize(TSARKIMEXFinalizePackage);CHKERRQ(ierr); 4878a381b04SJed Brown PetscFunctionReturn(0); 4888a381b04SJed Brown } 4898a381b04SJed Brown 4908a381b04SJed Brown #undef __FUNCT__ 4918a381b04SJed Brown #define __FUNCT__ "TSARKIMEXFinalizePackage" 4928a381b04SJed Brown /*@C 4938a381b04SJed Brown TSARKIMEXFinalizePackage - This function destroys everything in the TSARKIMEX package. It is 4948a381b04SJed Brown called from PetscFinalize(). 4958a381b04SJed Brown 4968a381b04SJed Brown Level: developer 4978a381b04SJed Brown 4988a381b04SJed Brown .keywords: Petsc, destroy, package 4998a381b04SJed Brown .seealso: PetscFinalize() 5008a381b04SJed Brown @*/ 5018a381b04SJed Brown PetscErrorCode TSARKIMEXFinalizePackage(void) 5028a381b04SJed Brown { 5038a381b04SJed Brown PetscErrorCode ierr; 5048a381b04SJed Brown 5058a381b04SJed Brown PetscFunctionBegin; 5068a381b04SJed Brown TSARKIMEXPackageInitialized = PETSC_FALSE; 5078a381b04SJed Brown ierr = TSARKIMEXRegisterDestroy();CHKERRQ(ierr); 5088a381b04SJed Brown PetscFunctionReturn(0); 5098a381b04SJed Brown } 5108a381b04SJed Brown 5118a381b04SJed Brown #undef __FUNCT__ 5128a381b04SJed Brown #define __FUNCT__ "TSARKIMEXRegister" 513cd652676SJed Brown /*@C 514cd652676SJed Brown TSARKIMEXRegister - register an ARK IMEX scheme by providing the entries in the Butcher tableau and optionally embedded approximations and interpolation 515cd652676SJed Brown 516cd652676SJed Brown Not Collective, but the same schemes should be registered on all processes on which they will be used 517cd652676SJed Brown 518cd652676SJed Brown Input Parameters: 519cd652676SJed Brown + name - identifier for method 520cd652676SJed Brown . order - approximation order of method 521cd652676SJed Brown . s - number of stages, this is the dimension of the matrices below 522cd652676SJed Brown . At - Butcher table of stage coefficients for stiff part (dimension s*s, row-major) 5230298fd71SBarry Smith . bt - Butcher table for completing the stiff part of the step (dimension s; NULL to use the last row of At) 5240298fd71SBarry Smith . ct - Abscissa of each stiff stage (dimension s, NULL to use row sums of At) 525cd652676SJed Brown . A - Non-stiff stage coefficients (dimension s*s, row-major) 5260298fd71SBarry Smith . b - Non-stiff step completion table (dimension s; NULL to use last row of At) 5270298fd71SBarry Smith . c - Non-stiff abscissa (dimension s; NULL to use row sums of A) 5280298fd71SBarry Smith . bembedt - Stiff part of completion table for embedded method (dimension s; NULL if not available) 5290298fd71SBarry Smith . bembed - Non-stiff part of completion table for embedded method (dimension s; NULL to use bembedt if provided) 530cd652676SJed Brown . pinterp - Order of the interpolation scheme, equal to the number of columns of binterpt and binterp 531cd652676SJed Brown . binterpt - Coefficients of the interpolation formula for the stiff part (dimension s*pinterp) 5320298fd71SBarry Smith - binterp - Coefficients of the interpolation formula for the non-stiff part (dimension s*pinterp; NULL to reuse binterpt) 533cd652676SJed Brown 534cd652676SJed Brown Notes: 535cd652676SJed Brown Several ARK IMEX methods are provided, this function is only needed to create new methods. 536cd652676SJed Brown 537cd652676SJed Brown Level: advanced 538cd652676SJed Brown 539cd652676SJed Brown .keywords: TS, register 540cd652676SJed Brown 541cd652676SJed Brown .seealso: TSARKIMEX 542cd652676SJed Brown @*/ 54319fd82e9SBarry Smith PetscErrorCode TSARKIMEXRegister(TSARKIMEXType name,PetscInt order,PetscInt s, 5448a381b04SJed Brown const PetscReal At[],const PetscReal bt[],const PetscReal ct[], 545cd652676SJed Brown const PetscReal A[],const PetscReal b[],const PetscReal c[], 546108c343cSJed Brown const PetscReal bembedt[],const PetscReal bembed[], 547cd652676SJed Brown PetscInt pinterp,const PetscReal binterpt[],const PetscReal binterp[]) 5488a381b04SJed Brown { 5498a381b04SJed Brown PetscErrorCode ierr; 5508a381b04SJed Brown ARKTableauLink link; 5518a381b04SJed Brown ARKTableau t; 5528a381b04SJed Brown PetscInt i,j; 5538a381b04SJed Brown 5548a381b04SJed Brown PetscFunctionBegin; 5551795a4d1SJed Brown ierr = PetscCalloc1(1,&link);CHKERRQ(ierr); 5568a381b04SJed Brown t = &link->tab; 5578a381b04SJed Brown ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 5588a381b04SJed Brown t->order = order; 5598a381b04SJed Brown t->s = s; 560dcca6d9dSJed Brown ierr = PetscMalloc6(s*s,&t->At,s,&t->bt,s,&t->ct,s*s,&t->A,s,&t->b,s,&t->c);CHKERRQ(ierr); 5618a381b04SJed Brown ierr = PetscMemcpy(t->At,At,s*s*sizeof(At[0]));CHKERRQ(ierr); 5628a381b04SJed Brown ierr = PetscMemcpy(t->A,A,s*s*sizeof(A[0]));CHKERRQ(ierr); 5638a381b04SJed Brown if (bt) { ierr = PetscMemcpy(t->bt,bt,s*sizeof(bt[0]));CHKERRQ(ierr); } 5648a381b04SJed Brown else for (i=0; i<s; i++) t->bt[i] = At[(s-1)*s+i]; 5658a381b04SJed Brown if (b) { ierr = PetscMemcpy(t->b,b,s*sizeof(b[0]));CHKERRQ(ierr); } 5665dceddf7SDebojyoti Ghosh else for (i=0; i<s; i++) t->b[i] = t->bt[i]; 5678a381b04SJed Brown if (ct) { ierr = PetscMemcpy(t->ct,ct,s*sizeof(ct[0]));CHKERRQ(ierr); } 5688a381b04SJed Brown else for (i=0; i<s; i++) for (j=0,t->ct[i]=0; j<s; j++) t->ct[i] += At[i*s+j]; 5698a381b04SJed Brown if (c) { ierr = PetscMemcpy(t->c,c,s*sizeof(c[0]));CHKERRQ(ierr); } 5708a381b04SJed Brown else for (i=0; i<s; i++) for (j=0,t->c[i]=0; j<s; j++) t->c[i] += A[i*s+j]; 571e817cc15SEmil Constantinescu t->stiffly_accurate = PETSC_TRUE; 572e817cc15SEmil Constantinescu for (i=0; i<s; i++) if (t->At[(s-1)*s+i] != t->bt[i]) t->stiffly_accurate = PETSC_FALSE; 573e817cc15SEmil Constantinescu t->explicit_first_stage = PETSC_TRUE; 574e817cc15SEmil Constantinescu for (i=0; i<s; i++) if (t->At[i] != 0.0) t->explicit_first_stage = PETSC_FALSE; 575e817cc15SEmil Constantinescu /*def of FSAL can be made more precise*/ 5764e9d4bf5SJed Brown t->FSAL_implicit = (PetscBool)(t->explicit_first_stage && t->stiffly_accurate); 577108c343cSJed Brown if (bembedt) { 578dcca6d9dSJed Brown ierr = PetscMalloc2(s,&t->bembedt,s,&t->bembed);CHKERRQ(ierr); 579108c343cSJed Brown ierr = PetscMemcpy(t->bembedt,bembedt,s*sizeof(bembedt[0]));CHKERRQ(ierr); 580108c343cSJed Brown ierr = PetscMemcpy(t->bembed,bembed ? bembed : bembedt,s*sizeof(bembed[0]));CHKERRQ(ierr); 581108c343cSJed Brown } 582108c343cSJed Brown 5834f385281SJed Brown t->pinterp = pinterp; 584dcca6d9dSJed Brown ierr = PetscMalloc2(s*pinterp,&t->binterpt,s*pinterp,&t->binterp);CHKERRQ(ierr); 585cd652676SJed Brown ierr = PetscMemcpy(t->binterpt,binterpt,s*pinterp*sizeof(binterpt[0]));CHKERRQ(ierr); 586cd652676SJed Brown ierr = PetscMemcpy(t->binterp,binterp ? binterp : binterpt,s*pinterp*sizeof(binterpt[0]));CHKERRQ(ierr); 5878a381b04SJed Brown link->next = ARKTableauList; 5888a381b04SJed Brown ARKTableauList = link; 5898a381b04SJed Brown PetscFunctionReturn(0); 5908a381b04SJed Brown } 5918a381b04SJed Brown 5928a381b04SJed Brown #undef __FUNCT__ 593108c343cSJed Brown #define __FUNCT__ "TSEvaluateStep_ARKIMEX" 594108c343cSJed Brown /* 595108c343cSJed Brown The step completion formula is 596108c343cSJed Brown 597108c343cSJed Brown x1 = x0 - h bt^T YdotI + h b^T YdotRHS 598108c343cSJed Brown 599108c343cSJed Brown This function can be called before or after ts->vec_sol has been updated. 600108c343cSJed Brown Suppose we have a completion formula (bt,b) and an embedded formula (bet,be) of different order. 601108c343cSJed Brown We can write 602108c343cSJed Brown 603108c343cSJed Brown x1e = x0 - h bet^T YdotI + h be^T YdotRHS 604108c343cSJed Brown = x1 + h bt^T YdotI - h b^T YdotRHS - h bet^T YdotI + h be^T YdotRHS 605108c343cSJed Brown = x1 - h (bet - bt)^T YdotI + h (be - b)^T YdotRHS 606108c343cSJed Brown 607108c343cSJed Brown so we can evaluate the method with different order even after the step has been optimistically completed. 608108c343cSJed Brown */ 609108c343cSJed Brown static PetscErrorCode TSEvaluateStep_ARKIMEX(TS ts,PetscInt order,Vec X,PetscBool *done) 610108c343cSJed Brown { 611108c343cSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 612108c343cSJed Brown ARKTableau tab = ark->tableau; 613108c343cSJed Brown PetscScalar *w = ark->work; 614108c343cSJed Brown PetscReal h; 615108c343cSJed Brown PetscInt s = tab->s,j; 616108c343cSJed Brown PetscErrorCode ierr; 617108c343cSJed Brown 618108c343cSJed Brown PetscFunctionBegin; 619108c343cSJed Brown switch (ark->status) { 620108c343cSJed Brown case TS_STEP_INCOMPLETE: 621108c343cSJed Brown case TS_STEP_PENDING: 622108c343cSJed Brown h = ts->time_step; break; 623108c343cSJed Brown case TS_STEP_COMPLETE: 624108c343cSJed Brown h = ts->time_step_prev; break; 625ce94432eSBarry Smith default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 626108c343cSJed Brown } 627108c343cSJed Brown if (order == tab->order) { 628e817cc15SEmil Constantinescu if (ark->status == TS_STEP_INCOMPLETE) { 629740132f1SEmil Constantinescu if (!ark->imex && tab->stiffly_accurate) { /* Only the stiffly accurate implicit formula is used */ 630e817cc15SEmil Constantinescu ierr = VecCopy(ark->Y[s-1],X);CHKERRQ(ierr); 631e817cc15SEmil Constantinescu } else { /* Use the standard completion formula (bt,b) */ 632108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 633e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*tab->bt[j]; 634108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotI);CHKERRQ(ierr); 635e817cc15SEmil Constantinescu if (ark->imex) { /* Method is IMEX, complete the explicit formula */ 636108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*tab->b[j]; 637108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 638e817cc15SEmil Constantinescu } 639e817cc15SEmil Constantinescu } 640108c343cSJed Brown } else {ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);} 641108c343cSJed Brown if (done) *done = PETSC_TRUE; 642108c343cSJed Brown PetscFunctionReturn(0); 643108c343cSJed Brown } else if (order == tab->order-1) { 644108c343cSJed Brown if (!tab->bembedt) goto unavailable; 645108c343cSJed Brown if (ark->status == TS_STEP_INCOMPLETE) { /* Complete with the embedded method (bet,be) */ 646108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 647e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*tab->bembedt[j]; 648108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotI);CHKERRQ(ierr); 649108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*tab->bembed[j]; 650108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 651108c343cSJed Brown } else { /* Rollback and re-complete using (bet-be,be-b) */ 652108c343cSJed Brown ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 653e817cc15SEmil Constantinescu for (j=0; j<s; j++) w[j] = h*(tab->bembedt[j] - tab->bt[j]); 654108c343cSJed Brown ierr = VecMAXPY(X,tab->s,w,ark->YdotI);CHKERRQ(ierr); 655108c343cSJed Brown for (j=0; j<s; j++) w[j] = h*(tab->bembed[j] - tab->b[j]); 656108c343cSJed Brown ierr = VecMAXPY(X,s,w,ark->YdotRHS);CHKERRQ(ierr); 657108c343cSJed Brown } 658108c343cSJed Brown if (done) *done = PETSC_TRUE; 659108c343cSJed Brown PetscFunctionReturn(0); 660108c343cSJed Brown } 661108c343cSJed Brown unavailable: 662108c343cSJed Brown if (done) *done = PETSC_FALSE; 663a7fac7c2SEmil Constantinescu else SETERRQ3(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"ARKIMEX '%s' of order %D cannot evaluate step at order %D. Consider using -ts_adapt_type none or a different method that has an embedded estimate.",tab->name,tab->order,order); 664108c343cSJed Brown PetscFunctionReturn(0); 665108c343cSJed Brown } 666108c343cSJed Brown 667108c343cSJed Brown #undef __FUNCT__ 66824655328SShri #define __FUNCT__ "TSRollBack_ARKIMEX" 66924655328SShri static PetscErrorCode TSRollBack_ARKIMEX(TS ts) 67024655328SShri { 67124655328SShri TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 67224655328SShri ARKTableau tab = ark->tableau; 67324655328SShri const PetscInt s = tab->s; 67424655328SShri const PetscReal *bt = tab->bt,*b = tab->b; 67524655328SShri PetscScalar *w = ark->work; 67624655328SShri Vec *YdotI = ark->YdotI,*YdotRHS = ark->YdotRHS; 67724655328SShri PetscInt j; 67824655328SShri PetscReal h=ts->time_step; 67924655328SShri PetscErrorCode ierr; 68024655328SShri 68124655328SShri PetscFunctionBegin; 68224655328SShri for (j=0; j<s; j++) w[j] = -h*bt[j]; 68324655328SShri ierr = VecMAXPY(ts->vec_sol,s,w,YdotI);CHKERRQ(ierr); 68424655328SShri for (j=0; j<s; j++) w[j] = -h*b[j]; 68524655328SShri ierr = VecMAXPY(ts->vec_sol,s,w,YdotRHS);CHKERRQ(ierr); 68624655328SShri ark->status = TS_STEP_INCOMPLETE; 68724655328SShri PetscFunctionReturn(0); 68824655328SShri } 68924655328SShri 69024655328SShri #undef __FUNCT__ 6918a381b04SJed Brown #define __FUNCT__ "TSStep_ARKIMEX" 6928a381b04SJed Brown static PetscErrorCode TSStep_ARKIMEX(TS ts) 6938a381b04SJed Brown { 6948a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 6958a381b04SJed Brown ARKTableau tab = ark->tableau; 6968a381b04SJed Brown const PetscInt s = tab->s; 69724655328SShri const PetscReal *At = tab->At,*A = tab->A,*ct = tab->ct,*c = tab->c; 698406d0ec2SJed Brown PetscScalar *w = ark->work; 6991297b224SEmil Constantinescu Vec *Y = ark->Y,*YdotI = ark->YdotI,*YdotRHS = ark->YdotRHS,Ydot = ark->Ydot,Ydot0 = ark->Ydot0,Z = ark->Z; 70056dcabbaSDebojyoti Ghosh PetscBool init_guess_extrp = ark->init_guess_extrp; 701108c343cSJed Brown TSAdapt adapt; 7028a381b04SJed Brown SNES snes; 703108c343cSJed Brown PetscInt i,j,its,lits,reject,next_scheme; 704108c343cSJed Brown PetscReal t; 70524655328SShri PetscReal next_time_step; 706108c343cSJed Brown PetscBool accept; 7078a381b04SJed Brown PetscErrorCode ierr; 708f85781f1SEmil Constantinescu SNESConvergedReason snes_reason; 7098a381b04SJed Brown 7108a381b04SJed Brown PetscFunctionBegin; 7110e27d5d5SShri if (ts->equation_type >= TS_EQ_IMPLICIT && tab->explicit_first_stage && (!ts->event || (ts->event && ts->event->status != TSEVENT_PROCESSING))) { 712e817cc15SEmil Constantinescu PetscReal valid_time; 713e817cc15SEmil Constantinescu PetscBool isvalid; 71460427346SBarry Smith ierr = PetscObjectComposedDataGetReal((PetscObject)ts->vec_sol,explicit_stage_time_id,valid_time,isvalid);CHKERRQ(ierr); 715e817cc15SEmil Constantinescu if (!isvalid || valid_time != ts->ptime) { 716e817cc15SEmil Constantinescu TS ts_start; 717baa10174SEmil Constantinescu SNES snes_dup=NULL; 71819436ca2SJed Brown 719baa10174SEmil Constantinescu ierr = TSClone(ts,&ts_start);CHKERRQ(ierr); 720bbd56ea5SKarl Rupp 721e817cc15SEmil Constantinescu ierr = TSSetSolution(ts_start,ts->vec_sol);CHKERRQ(ierr); 722e817cc15SEmil Constantinescu ierr = TSSetTime(ts_start,ts->ptime);CHKERRQ(ierr); 723eb082435SEmil Constantinescu ierr = TSSetDuration(ts_start,1,ts->ptime+ts->time_step);CHKERRQ(ierr); 724feed9e9dSBarry Smith ierr = TSSetExactFinalTime(ts_start,TS_EXACTFINALTIME_STEPOVER);CHKERRQ(ierr); 725740132f1SEmil Constantinescu ierr = TSSetTimeStep(ts_start,ts->time_step);CHKERRQ(ierr); 726e817cc15SEmil Constantinescu ierr = TSSetType(ts_start,TSARKIMEX);CHKERRQ(ierr); 727740132f1SEmil Constantinescu ierr = TSARKIMEXSetFullyImplicit(ts_start,PETSC_TRUE);CHKERRQ(ierr); 728e817cc15SEmil Constantinescu ierr = TSARKIMEXSetType(ts_start,TSARKIMEX1BEE);CHKERRQ(ierr); 72934561852SEmil Constantinescu 730e817cc15SEmil Constantinescu ierr = TSSolve(ts_start,ts->vec_sol);CHKERRQ(ierr); 731e817cc15SEmil Constantinescu ierr = TSGetTime(ts_start,&ts->ptime);CHKERRQ(ierr); 732bbd56ea5SKarl Rupp 733740132f1SEmil Constantinescu ts->time_step = ts_start->time_step; 734740132f1SEmil Constantinescu ts->steps++; 735e817cc15SEmil Constantinescu ierr = VecCopy(((TS_ARKIMEX*)ts_start->data)->Ydot0,Ydot0);CHKERRQ(ierr); 73634561852SEmil Constantinescu 737d15a3a53SEmil Constantinescu /* Set the correct TS in SNES */ 738d15a3a53SEmil Constantinescu /* We'll try to bypass this by changing the method on the fly */ 739e5168f73SEmil Constantinescu ierr = TSGetSNES(ts,&snes_dup);CHKERRQ(ierr); 740e5168f73SEmil Constantinescu ierr = TSSetSNES(ts,snes_dup);CHKERRQ(ierr); 741d15a3a53SEmil Constantinescu 742166a6834SEmil Constantinescu ierr = TSDestroy(&ts_start);CHKERRQ(ierr); 743e817cc15SEmil Constantinescu } 744e817cc15SEmil Constantinescu } 745e817cc15SEmil Constantinescu 7468a381b04SJed Brown ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 7478a381b04SJed Brown t = ts->ptime; 74824655328SShri next_time_step = ts->time_step; 749108c343cSJed Brown accept = PETSC_TRUE; 750108c343cSJed Brown ark->status = TS_STEP_INCOMPLETE; 7518a381b04SJed Brown 752e817cc15SEmil Constantinescu 75397335746SJed Brown for (reject=0; reject<ts->max_reject && !ts->reason; reject++,ts->reject++) { 754108c343cSJed Brown PetscReal h = ts->time_step; 7558a381b04SJed Brown for (i=0; i<s; i++) { 7569be3e283SDebojyoti Ghosh ark->stage_time = t + h*ct[i]; 7578a381b04SJed Brown if (At[i*s+i] == 0) { /* This stage is explicit */ 7586c4ed002SBarry Smith if(i!=0 && ts->equation_type>=TS_EQ_IMPLICIT) SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"Explicit stages other than the first one are not supported for implicit problems"); 7598a381b04SJed Brown ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 760e817cc15SEmil Constantinescu for (j=0; j<i; j++) w[j] = h*At[i*s+j]; 7618a381b04SJed Brown ierr = VecMAXPY(Y[i],i,w,YdotI);CHKERRQ(ierr); 7628a381b04SJed Brown for (j=0; j<i; j++) w[j] = h*A[i*s+j]; 7638a381b04SJed Brown ierr = VecMAXPY(Y[i],i,w,YdotRHS);CHKERRQ(ierr); 7648a381b04SJed Brown } else { 765b296d7d5SJed Brown ark->scoeff = 1./At[i*s+i]; 766b8123daeSJed Brown ierr = TSPreStage(ts,ark->stage_time);CHKERRQ(ierr); 767f16577ceSEmil Constantinescu 7688a381b04SJed Brown /* Ydot = shift*(Y-Z) */ 7698a381b04SJed Brown ierr = VecCopy(ts->vec_sol,Z);CHKERRQ(ierr); 770e817cc15SEmil Constantinescu for (j=0; j<i; j++) w[j] = h*At[i*s+j]; 7714f385281SJed Brown ierr = VecMAXPY(Z,i,w,YdotI);CHKERRQ(ierr); 772c58d1302SEmil Constantinescu for (j=0; j<i; j++) w[j] = h*A[i*s+j]; 773c58d1302SEmil Constantinescu ierr = VecMAXPY(Z,i,w,YdotRHS);CHKERRQ(ierr); 774f16577ceSEmil Constantinescu 7759eef816dSJed Brown if (init_guess_extrp && ark->prev_step_valid) { 77656dcabbaSDebojyoti Ghosh /* Initial guess extrapolated from previous time step stage values */ 77756dcabbaSDebojyoti Ghosh ierr = TSExtrapolate_ARKIMEX(ts,c[i],Y[i]);CHKERRQ(ierr); 77856dcabbaSDebojyoti Ghosh } else { 7798a381b04SJed Brown /* Initial guess taken from last stage */ 7808a381b04SJed Brown ierr = VecCopy(i>0 ? Y[i-1] : ts->vec_sol,Y[i]);CHKERRQ(ierr); 78156dcabbaSDebojyoti Ghosh } 782baa10174SEmil Constantinescu ierr = SNESSolve(snes,NULL,Y[i]);CHKERRQ(ierr); 7838a381b04SJed Brown ierr = SNESGetIterationNumber(snes,&its);CHKERRQ(ierr); 7848a381b04SJed Brown ierr = SNESGetLinearSolveIterations(snes,&lits);CHKERRQ(ierr); 7855ef26d82SJed Brown ts->snes_its += its; ts->ksp_its += lits; 786552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 787b295832fSPierre Barbier de Reuille ierr = TSAdaptCheckStage(adapt,ts,ark->stage_time,Y[i],&accept);CHKERRQ(ierr); 7881be93e3eSJed Brown if (!accept) { 7891be93e3eSJed Brown /* We are likely rejecting the step because of solver or function domain problems so we should not attempt to 7901be93e3eSJed Brown * use extrapolation to initialize the solves on the next attempt. */ 7911be93e3eSJed Brown ark->prev_step_valid = PETSC_FALSE; 7921be93e3eSJed Brown goto reject_step; 7931be93e3eSJed Brown } 7948a381b04SJed Brown } 7959be3e283SDebojyoti Ghosh ierr = TSPostStage(ts,ark->stage_time,i,Y); CHKERRQ(ierr); 796e817cc15SEmil Constantinescu if (ts->equation_type>=TS_EQ_IMPLICIT) { 797e817cc15SEmil Constantinescu if (i==0 && tab->explicit_first_stage) { 7986c4ed002SBarry Smith if(!tab->stiffly_accurate ) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSARKIMEX %s is not stiffly accurate and therefore explicit-first stage methods cannot be used if the equation is implicit because the slope cannot be evaluated",ark->tableau->name); 799df5e1e3dSEmil Constantinescu ierr = VecCopy(Ydot0,YdotI[0]);CHKERRQ(ierr); /* YdotI = YdotI(tn-1) */ 800e817cc15SEmil Constantinescu } else { 801df5e1e3dSEmil Constantinescu ierr = VecAXPBYPCZ(YdotI[i],-ark->scoeff/h,ark->scoeff/h,0,Z,Y[i]);CHKERRQ(ierr); /* YdotI = shift*(X-Z) */ 802e817cc15SEmil Constantinescu } 803e817cc15SEmil Constantinescu } else { 8045eca1a21SEmil Constantinescu if (i==0 && tab->explicit_first_stage) { 8058a381b04SJed Brown ierr = VecZeroEntries(Ydot);CHKERRQ(ierr); 806df5e1e3dSEmil Constantinescu ierr = TSComputeIFunction(ts,t+h*ct[i],Y[i],Ydot,YdotI[i],ark->imex);CHKERRQ(ierr);/* YdotI = -G(t,Y,0) */ 807e817cc15SEmil Constantinescu ierr = VecScale(YdotI[i], -1.0);CHKERRQ(ierr); 8085eca1a21SEmil Constantinescu } else { 809df5e1e3dSEmil Constantinescu ierr = VecAXPBYPCZ(YdotI[i],-ark->scoeff/h,ark->scoeff/h,0,Z,Y[i]);CHKERRQ(ierr); /* YdotI = shift*(X-Z) */ 8105eca1a21SEmil Constantinescu } 8114cc180ffSJed Brown if (ark->imex) { 8128a381b04SJed Brown ierr = TSComputeRHSFunction(ts,t+h*c[i],Y[i],YdotRHS[i]);CHKERRQ(ierr); 8134cc180ffSJed Brown } else { 8144cc180ffSJed Brown ierr = VecZeroEntries(YdotRHS[i]);CHKERRQ(ierr); 8154cc180ffSJed Brown } 8168a381b04SJed Brown } 817e817cc15SEmil Constantinescu } 8180298fd71SBarry Smith ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 819108c343cSJed Brown ark->status = TS_STEP_PENDING; 8208a381b04SJed Brown 821108c343cSJed Brown /* Register only the current method as a candidate because we're not supporting multiple candidates yet. */ 822552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 823108c343cSJed Brown ierr = TSAdaptCandidatesClear(adapt);CHKERRQ(ierr); 824108c343cSJed Brown ierr = TSAdaptCandidateAdd(adapt,tab->name,tab->order,1,tab->ccfl,1.*tab->s,PETSC_TRUE);CHKERRQ(ierr); 825108c343cSJed Brown ierr = TSAdaptChoose(adapt,ts,ts->time_step,&next_scheme,&next_time_step,&accept);CHKERRQ(ierr); 826108c343cSJed Brown if (accept) { 827108c343cSJed Brown /* ignore next_scheme for now */ 8288a381b04SJed Brown ts->ptime += ts->time_step; 829cdbf8f93SLisandro Dalcin ts->time_step = next_time_step; 8308a381b04SJed Brown ts->steps++; 831e817cc15SEmil Constantinescu if (ts->equation_type>=TS_EQ_IMPLICIT) { /* save the initial slope for the next step*/ 832e817cc15SEmil Constantinescu ierr = VecCopy(YdotI[s-1],Ydot0);CHKERRQ(ierr); 833e817cc15SEmil Constantinescu } 834108c343cSJed Brown ark->status = TS_STEP_COMPLETE; 835e817cc15SEmil Constantinescu if (tab->explicit_first_stage) { 836e817cc15SEmil Constantinescu ierr = PetscObjectComposedDataSetReal((PetscObject)ts->vec_sol,explicit_stage_time_id,ts->ptime);CHKERRQ(ierr); 837e817cc15SEmil Constantinescu } 83864b5d2f7SDebojyoti Ghosh /* Save the Y, YdotI, YdotRHS for extrapolation initial guess */ 83964b5d2f7SDebojyoti Ghosh if (ark->init_guess_extrp) { 84064b5d2f7SDebojyoti Ghosh for (i = 0; i<s; i++) { 84164b5d2f7SDebojyoti Ghosh ierr = VecCopy(Y[i],ark->Y_prev[i]);CHKERRQ(ierr); 84264b5d2f7SDebojyoti Ghosh ierr = VecCopy(YdotRHS[i],ark->YdotRHS_prev[i]);CHKERRQ(ierr); 84364b5d2f7SDebojyoti Ghosh ierr = VecCopy(YdotI[i],ark->YdotI_prev[i]);CHKERRQ(ierr); 84464b5d2f7SDebojyoti Ghosh } 8459eef816dSJed Brown ark->prev_step_valid = PETSC_TRUE; 84664b5d2f7SDebojyoti Ghosh } 847108c343cSJed Brown break; 848108c343cSJed Brown } else { /* Roll back the current step */ 84924655328SShri ts->ptime += next_time_step; /* This will be undone in rollback */ 850108c343cSJed Brown ark->status = TS_STEP_INCOMPLETE; 85124655328SShri ierr = TSRollBack(ts);CHKERRQ(ierr); 852108c343cSJed Brown } 853476b6736SJed Brown reject_step: continue; 854108c343cSJed Brown } 855f85781f1SEmil Constantinescu if (ark->status != TS_STEP_COMPLETE && !ts->reason){ 856f85781f1SEmil Constantinescu ierr=SNESGetConvergedReason(snes,&snes_reason);CHKERRQ(ierr); 857f85781f1SEmil Constantinescu if(snes_reason<0) ts->reason = TS_DIVERGED_NONLINEAR_SOLVE; 858f85781f1SEmil Constantinescu else ts->reason = TS_DIVERGED_STEP_REJECTED; 859f85781f1SEmil Constantinescu } 8608a381b04SJed Brown PetscFunctionReturn(0); 8618a381b04SJed Brown } 8628a381b04SJed Brown 863cd652676SJed Brown #undef __FUNCT__ 864cd652676SJed Brown #define __FUNCT__ "TSInterpolate_ARKIMEX" 865cd652676SJed Brown static PetscErrorCode TSInterpolate_ARKIMEX(TS ts,PetscReal itime,Vec X) 866cd652676SJed Brown { 867cd652676SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 8684f385281SJed Brown PetscInt s = ark->tableau->s,pinterp = ark->tableau->pinterp,i,j; 869108c343cSJed Brown PetscReal h; 870108c343cSJed Brown PetscReal tt,t; 871cd652676SJed Brown PetscScalar *bt,*b; 872cd652676SJed Brown const PetscReal *Bt = ark->tableau->binterpt,*B = ark->tableau->binterp; 873cd652676SJed Brown PetscErrorCode ierr; 874cd652676SJed Brown 875cd652676SJed Brown PetscFunctionBegin; 876ce94432eSBarry Smith if (!Bt || !B) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSARKIMEX %s does not have an interpolation formula",ark->tableau->name); 877108c343cSJed Brown switch (ark->status) { 878108c343cSJed Brown case TS_STEP_INCOMPLETE: 879108c343cSJed Brown case TS_STEP_PENDING: 880108c343cSJed Brown h = ts->time_step; 881108c343cSJed Brown t = (itime - ts->ptime)/h; 882108c343cSJed Brown break; 883108c343cSJed Brown case TS_STEP_COMPLETE: 884108c343cSJed Brown h = ts->time_step_prev; 885108c343cSJed Brown t = (itime - ts->ptime)/h + 1; /* In the interval [0,1] */ 886108c343cSJed Brown break; 887ce94432eSBarry Smith default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 888108c343cSJed Brown } 889dcca6d9dSJed Brown ierr = PetscMalloc2(s,&bt,s,&b);CHKERRQ(ierr); 890cd652676SJed Brown for (i=0; i<s; i++) bt[i] = b[i] = 0; 8914f385281SJed Brown for (j=0,tt=t; j<pinterp; j++,tt*=t) { 892cd652676SJed Brown for (i=0; i<s; i++) { 893c1758d98SDebojyoti Ghosh bt[i] += h * Bt[i*pinterp+j] * tt; 894108c343cSJed Brown b[i] += h * B[i*pinterp+j] * tt; 895cd652676SJed Brown } 896cd652676SJed Brown } 897cd652676SJed Brown ierr = VecCopy(ark->Y[0],X);CHKERRQ(ierr); 898cd652676SJed Brown ierr = VecMAXPY(X,s,bt,ark->YdotI);CHKERRQ(ierr); 899cd652676SJed Brown ierr = VecMAXPY(X,s,b,ark->YdotRHS);CHKERRQ(ierr); 900cd652676SJed Brown ierr = PetscFree2(bt,b);CHKERRQ(ierr); 901cd652676SJed Brown PetscFunctionReturn(0); 902cd652676SJed Brown } 903cd652676SJed Brown 90456dcabbaSDebojyoti Ghosh #undef __FUNCT__ 90556dcabbaSDebojyoti Ghosh #define __FUNCT__ "TSExtrapolate_ARKIMEX" 90656dcabbaSDebojyoti Ghosh static PetscErrorCode TSExtrapolate_ARKIMEX(TS ts,PetscReal c,Vec X) 90756dcabbaSDebojyoti Ghosh { 90856dcabbaSDebojyoti Ghosh TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 90956dcabbaSDebojyoti Ghosh PetscInt s = ark->tableau->s,pinterp = ark->tableau->pinterp,i,j; 91056dcabbaSDebojyoti Ghosh PetscReal h; 91156dcabbaSDebojyoti Ghosh PetscReal tt,t; 91256dcabbaSDebojyoti Ghosh PetscScalar *bt,*b; 91356dcabbaSDebojyoti Ghosh const PetscReal *Bt = ark->tableau->binterpt,*B = ark->tableau->binterp; 91456dcabbaSDebojyoti Ghosh PetscErrorCode ierr; 91556dcabbaSDebojyoti Ghosh 91656dcabbaSDebojyoti Ghosh PetscFunctionBegin; 91756dcabbaSDebojyoti Ghosh if (!Bt || !B) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSARKIMEX %s does not have an interpolation formula",ark->tableau->name); 91856dcabbaSDebojyoti Ghosh t = 1.0 + (ts->time_step/ts->time_step_prev)*c; 91981d12688SDebojyoti Ghosh h = ts->time_step; 920dcca6d9dSJed Brown ierr = PetscMalloc2(s,&bt,s,&b);CHKERRQ(ierr); 92156dcabbaSDebojyoti Ghosh for (i=0; i<s; i++) bt[i] = b[i] = 0; 92256dcabbaSDebojyoti Ghosh for (j=0,tt=t; j<pinterp; j++,tt*=t) { 92356dcabbaSDebojyoti Ghosh for (i=0; i<s; i++) { 92481d12688SDebojyoti Ghosh bt[i] += h * Bt[i*pinterp+j] * tt; 92556dcabbaSDebojyoti Ghosh b[i] += h * B[i*pinterp+j] * tt; 92656dcabbaSDebojyoti Ghosh } 92756dcabbaSDebojyoti Ghosh } 9289eef816dSJed Brown if (!ark->prev_step_valid) SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"Stages from previous step have not been stored"); 92956dcabbaSDebojyoti Ghosh ierr = VecCopy(ark->Y_prev[0],X);CHKERRQ(ierr); 93056dcabbaSDebojyoti Ghosh ierr = VecMAXPY(X,s,bt,ark->YdotI_prev);CHKERRQ(ierr); 93156dcabbaSDebojyoti Ghosh ierr = VecMAXPY(X,s,b,ark->YdotRHS_prev);CHKERRQ(ierr); 93256dcabbaSDebojyoti Ghosh ierr = PetscFree2(bt,b);CHKERRQ(ierr); 93356dcabbaSDebojyoti Ghosh PetscFunctionReturn(0); 93456dcabbaSDebojyoti Ghosh } 93556dcabbaSDebojyoti Ghosh 9368a381b04SJed Brown /*------------------------------------------------------------*/ 9378a381b04SJed Brown #undef __FUNCT__ 9388a381b04SJed Brown #define __FUNCT__ "TSReset_ARKIMEX" 9398a381b04SJed Brown static PetscErrorCode TSReset_ARKIMEX(TS ts) 9408a381b04SJed Brown { 9418a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 9428a381b04SJed Brown PetscInt s; 9438a381b04SJed Brown PetscErrorCode ierr; 9448a381b04SJed Brown 9458a381b04SJed Brown PetscFunctionBegin; 9468a381b04SJed Brown if (!ark->tableau) PetscFunctionReturn(0); 9478a381b04SJed Brown s = ark->tableau->s; 9488a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->Y);CHKERRQ(ierr); 9498a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->YdotI);CHKERRQ(ierr); 9508a381b04SJed Brown ierr = VecDestroyVecs(s,&ark->YdotRHS);CHKERRQ(ierr); 9510bf495dbSBarry Smith if (ark->init_guess_extrp) { 95256dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->Y_prev);CHKERRQ(ierr); 95356dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->YdotI_prev);CHKERRQ(ierr); 95456dcabbaSDebojyoti Ghosh ierr = VecDestroyVecs(s,&ark->YdotRHS_prev);CHKERRQ(ierr); 95556dcabbaSDebojyoti Ghosh } 9568a381b04SJed Brown ierr = VecDestroy(&ark->Ydot);CHKERRQ(ierr); 9578a381b04SJed Brown ierr = VecDestroy(&ark->Work);CHKERRQ(ierr); 958e817cc15SEmil Constantinescu ierr = VecDestroy(&ark->Ydot0);CHKERRQ(ierr); 9598a381b04SJed Brown ierr = VecDestroy(&ark->Z);CHKERRQ(ierr); 9608a381b04SJed Brown ierr = PetscFree(ark->work);CHKERRQ(ierr); 9618a381b04SJed Brown PetscFunctionReturn(0); 9628a381b04SJed Brown } 9638a381b04SJed Brown 9648a381b04SJed Brown #undef __FUNCT__ 9658a381b04SJed Brown #define __FUNCT__ "TSDestroy_ARKIMEX" 9668a381b04SJed Brown static PetscErrorCode TSDestroy_ARKIMEX(TS ts) 9678a381b04SJed Brown { 9688a381b04SJed Brown PetscErrorCode ierr; 9698a381b04SJed Brown 9708a381b04SJed Brown PetscFunctionBegin; 9718a381b04SJed Brown ierr = TSReset_ARKIMEX(ts);CHKERRQ(ierr); 9728a381b04SJed Brown ierr = PetscFree(ts->data);CHKERRQ(ierr); 973bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXGetType_C",NULL);CHKERRQ(ierr); 974bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetType_C",NULL);CHKERRQ(ierr); 975bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetFullyImplicit_C",NULL);CHKERRQ(ierr); 9768a381b04SJed Brown PetscFunctionReturn(0); 9778a381b04SJed Brown } 9788a381b04SJed Brown 979d5e6173cSPeter Brune 980d5e6173cSPeter Brune #undef __FUNCT__ 981d5e6173cSPeter Brune #define __FUNCT__ "TSARKIMEXGetVecs" 982d5e6173cSPeter Brune static PetscErrorCode TSARKIMEXGetVecs(TS ts,DM dm,Vec *Z,Vec *Ydot) 983d5e6173cSPeter Brune { 984d5e6173cSPeter Brune TS_ARKIMEX *ax = (TS_ARKIMEX*)ts->data; 985d5e6173cSPeter Brune PetscErrorCode ierr; 986d5e6173cSPeter Brune 987d5e6173cSPeter Brune PetscFunctionBegin; 988d5e6173cSPeter Brune if (Z) { 989d5e6173cSPeter Brune if (dm && dm != ts->dm) { 990d5e6173cSPeter Brune ierr = DMGetNamedGlobalVector(dm,"TSARKIMEX_Z",Z);CHKERRQ(ierr); 991d5e6173cSPeter Brune } else *Z = ax->Z; 992d5e6173cSPeter Brune } 993d5e6173cSPeter Brune if (Ydot) { 994d5e6173cSPeter Brune if (dm && dm != ts->dm) { 995d5e6173cSPeter Brune ierr = DMGetNamedGlobalVector(dm,"TSARKIMEX_Ydot",Ydot);CHKERRQ(ierr); 996d5e6173cSPeter Brune } else *Ydot = ax->Ydot; 997d5e6173cSPeter Brune } 998d5e6173cSPeter Brune PetscFunctionReturn(0); 999d5e6173cSPeter Brune } 1000d5e6173cSPeter Brune 1001d5e6173cSPeter Brune 1002d5e6173cSPeter Brune #undef __FUNCT__ 1003d5e6173cSPeter Brune #define __FUNCT__ "TSARKIMEXRestoreVecs" 1004d5e6173cSPeter Brune static PetscErrorCode TSARKIMEXRestoreVecs(TS ts,DM dm,Vec *Z,Vec *Ydot) 1005d5e6173cSPeter Brune { 1006d5e6173cSPeter Brune PetscErrorCode ierr; 1007d5e6173cSPeter Brune 1008d5e6173cSPeter Brune PetscFunctionBegin; 1009d5e6173cSPeter Brune if (Z) { 1010d5e6173cSPeter Brune if (dm && dm != ts->dm) { 1011d5e6173cSPeter Brune ierr = DMRestoreNamedGlobalVector(dm,"TSARKIMEX_Z",Z);CHKERRQ(ierr); 1012d5e6173cSPeter Brune } 1013d5e6173cSPeter Brune } 1014d5e6173cSPeter Brune if (Ydot) { 1015d5e6173cSPeter Brune if (dm && dm != ts->dm) { 1016d5e6173cSPeter Brune ierr = DMRestoreNamedGlobalVector(dm,"TSARKIMEX_Ydot",Ydot);CHKERRQ(ierr); 1017d5e6173cSPeter Brune } 1018d5e6173cSPeter Brune } 1019d5e6173cSPeter Brune PetscFunctionReturn(0); 1020d5e6173cSPeter Brune } 1021d5e6173cSPeter Brune 10228a381b04SJed Brown /* 10238a381b04SJed Brown This defines the nonlinear equation that is to be solved with SNES 10248a381b04SJed Brown G(U) = F[t0+Theta*dt, U, (U-U0)*shift] = 0 10258a381b04SJed Brown */ 10268a381b04SJed Brown #undef __FUNCT__ 10278a381b04SJed Brown #define __FUNCT__ "SNESTSFormFunction_ARKIMEX" 10288a381b04SJed Brown static PetscErrorCode SNESTSFormFunction_ARKIMEX(SNES snes,Vec X,Vec F,TS ts) 10298a381b04SJed Brown { 10308a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1031d5e6173cSPeter Brune DM dm,dmsave; 1032d5e6173cSPeter Brune Vec Z,Ydot; 1033b296d7d5SJed Brown PetscReal shift = ark->scoeff / ts->time_step; 10348a381b04SJed Brown PetscErrorCode ierr; 10358a381b04SJed Brown 10368a381b04SJed Brown PetscFunctionBegin; 1037d5e6173cSPeter Brune ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 1038d5e6173cSPeter Brune ierr = TSARKIMEXGetVecs(ts,dm,&Z,&Ydot);CHKERRQ(ierr); 1039b296d7d5SJed Brown ierr = VecAXPBYPCZ(Ydot,-shift,shift,0,Z,X);CHKERRQ(ierr); /* Ydot = shift*(X-Z) */ 1040d5e6173cSPeter Brune dmsave = ts->dm; 1041d5e6173cSPeter Brune ts->dm = dm; 1042740132f1SEmil Constantinescu 1043d5e6173cSPeter Brune ierr = TSComputeIFunction(ts,ark->stage_time,X,Ydot,F,ark->imex);CHKERRQ(ierr); 1044e817cc15SEmil Constantinescu 1045d5e6173cSPeter Brune ts->dm = dmsave; 1046d5e6173cSPeter Brune ierr = TSARKIMEXRestoreVecs(ts,dm,&Z,&Ydot);CHKERRQ(ierr); 10478a381b04SJed Brown PetscFunctionReturn(0); 10488a381b04SJed Brown } 10498a381b04SJed Brown 10508a381b04SJed Brown #undef __FUNCT__ 10518a381b04SJed Brown #define __FUNCT__ "SNESTSFormJacobian_ARKIMEX" 1052d1e9a80fSBarry Smith static PetscErrorCode SNESTSFormJacobian_ARKIMEX(SNES snes,Vec X,Mat A,Mat B,TS ts) 10538a381b04SJed Brown { 10548a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1055d5e6173cSPeter Brune DM dm,dmsave; 1056d5e6173cSPeter Brune Vec Ydot; 1057b296d7d5SJed Brown PetscReal shift = ark->scoeff / ts->time_step; 10588a381b04SJed Brown PetscErrorCode ierr; 10598a381b04SJed Brown 10608a381b04SJed Brown PetscFunctionBegin; 1061d5e6173cSPeter Brune ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 10620298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,dm,NULL,&Ydot);CHKERRQ(ierr); 10638a381b04SJed Brown /* ark->Ydot has already been computed in SNESTSFormFunction_ARKIMEX (SNES guarantees this) */ 1064d5e6173cSPeter Brune dmsave = ts->dm; 1065d5e6173cSPeter Brune ts->dm = dm; 1066740132f1SEmil Constantinescu 1067d1e9a80fSBarry Smith ierr = TSComputeIJacobian(ts,ark->stage_time,X,Ydot,shift,A,B,ark->imex);CHKERRQ(ierr); 1068740132f1SEmil Constantinescu 1069d5e6173cSPeter Brune ts->dm = dmsave; 10700298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,dm,NULL,&Ydot);CHKERRQ(ierr); 1071d5e6173cSPeter Brune PetscFunctionReturn(0); 1072d5e6173cSPeter Brune } 1073d5e6173cSPeter Brune 1074d5e6173cSPeter Brune #undef __FUNCT__ 1075d5e6173cSPeter Brune #define __FUNCT__ "DMCoarsenHook_TSARKIMEX" 1076d5e6173cSPeter Brune static PetscErrorCode DMCoarsenHook_TSARKIMEX(DM fine,DM coarse,void *ctx) 1077d5e6173cSPeter Brune { 1078d5e6173cSPeter Brune PetscFunctionBegin; 1079d5e6173cSPeter Brune PetscFunctionReturn(0); 1080d5e6173cSPeter Brune } 1081d5e6173cSPeter Brune 1082d5e6173cSPeter Brune #undef __FUNCT__ 1083d5e6173cSPeter Brune #define __FUNCT__ "DMRestrictHook_TSARKIMEX" 1084d5e6173cSPeter Brune static PetscErrorCode DMRestrictHook_TSARKIMEX(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 1085d5e6173cSPeter Brune { 1086d5e6173cSPeter Brune TS ts = (TS)ctx; 1087d5e6173cSPeter Brune PetscErrorCode ierr; 1088d5e6173cSPeter Brune Vec Z,Z_c; 1089d5e6173cSPeter Brune 1090d5e6173cSPeter Brune PetscFunctionBegin; 10910298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,fine,&Z,NULL);CHKERRQ(ierr); 10920298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,coarse,&Z_c,NULL);CHKERRQ(ierr); 1093d5e6173cSPeter Brune ierr = MatRestrict(restrct,Z,Z_c);CHKERRQ(ierr); 1094d5e6173cSPeter Brune ierr = VecPointwiseMult(Z_c,rscale,Z_c);CHKERRQ(ierr); 10950298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,fine,&Z,NULL);CHKERRQ(ierr); 10960298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,coarse,&Z_c,NULL);CHKERRQ(ierr); 10978a381b04SJed Brown PetscFunctionReturn(0); 10988a381b04SJed Brown } 10998a381b04SJed Brown 1100cdb298fcSPeter Brune 1101cdb298fcSPeter Brune #undef __FUNCT__ 1102cdb298fcSPeter Brune #define __FUNCT__ "DMSubDomainHook_TSARKIMEX" 1103cdb298fcSPeter Brune static PetscErrorCode DMSubDomainHook_TSARKIMEX(DM dm,DM subdm,void *ctx) 1104cdb298fcSPeter Brune { 1105cdb298fcSPeter Brune PetscFunctionBegin; 1106cdb298fcSPeter Brune PetscFunctionReturn(0); 1107cdb298fcSPeter Brune } 1108cdb298fcSPeter Brune 1109cdb298fcSPeter Brune #undef __FUNCT__ 1110cdb298fcSPeter Brune #define __FUNCT__ "DMSubDomainRestrictHook_TSARKIMEX" 1111cdb298fcSPeter Brune static PetscErrorCode DMSubDomainRestrictHook_TSARKIMEX(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx) 1112cdb298fcSPeter Brune { 1113cdb298fcSPeter Brune TS ts = (TS)ctx; 1114cdb298fcSPeter Brune PetscErrorCode ierr; 1115cdb298fcSPeter Brune Vec Z,Z_c; 1116cdb298fcSPeter Brune 1117cdb298fcSPeter Brune PetscFunctionBegin; 11180298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,dm,&Z,NULL);CHKERRQ(ierr); 11190298fd71SBarry Smith ierr = TSARKIMEXGetVecs(ts,subdm,&Z_c,NULL);CHKERRQ(ierr); 1120cdb298fcSPeter Brune 1121cdb298fcSPeter Brune ierr = VecScatterBegin(gscat,Z,Z_c,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1122cdb298fcSPeter Brune ierr = VecScatterEnd(gscat,Z,Z_c,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1123cdb298fcSPeter Brune 11240298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,dm,&Z,NULL);CHKERRQ(ierr); 11250298fd71SBarry Smith ierr = TSARKIMEXRestoreVecs(ts,subdm,&Z_c,NULL);CHKERRQ(ierr); 1126cdb298fcSPeter Brune PetscFunctionReturn(0); 1127cdb298fcSPeter Brune } 1128cdb298fcSPeter Brune 11298a381b04SJed Brown #undef __FUNCT__ 11308a381b04SJed Brown #define __FUNCT__ "TSSetUp_ARKIMEX" 11318a381b04SJed Brown static PetscErrorCode TSSetUp_ARKIMEX(TS ts) 11328a381b04SJed Brown { 11338a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 1134f2c2a1b9SBarry Smith ARKTableau tab; 1135f2c2a1b9SBarry Smith PetscInt s; 11368a381b04SJed Brown PetscErrorCode ierr; 1137d5e6173cSPeter Brune DM dm; 1138f9c1d6abSBarry Smith 11398a381b04SJed Brown PetscFunctionBegin; 11408a381b04SJed Brown if (!ark->tableau) { 1141e24355feSJed Brown ierr = TSARKIMEXSetType(ts,TSARKIMEXDefault);CHKERRQ(ierr); 11428a381b04SJed Brown } 1143f2c2a1b9SBarry Smith tab = ark->tableau; 1144f2c2a1b9SBarry Smith s = tab->s; 11458a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->Y);CHKERRQ(ierr); 11468a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotI);CHKERRQ(ierr); 11478a381b04SJed Brown ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotRHS);CHKERRQ(ierr); 114856dcabbaSDebojyoti Ghosh if (ark->init_guess_extrp) { 114956dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->Y_prev);CHKERRQ(ierr); 115056dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotI_prev);CHKERRQ(ierr); 115156dcabbaSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&ark->YdotRHS_prev);CHKERRQ(ierr); 115256dcabbaSDebojyoti Ghosh } 11538a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Ydot);CHKERRQ(ierr); 11548a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Work);CHKERRQ(ierr); 1155e817cc15SEmil Constantinescu ierr = VecDuplicate(ts->vec_sol,&ark->Ydot0);CHKERRQ(ierr); 11568a381b04SJed Brown ierr = VecDuplicate(ts->vec_sol,&ark->Z);CHKERRQ(ierr); 1157785e854fSJed Brown ierr = PetscMalloc1(s,&ark->work);CHKERRQ(ierr); 1158d5e6173cSPeter Brune ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 1159d5e6173cSPeter Brune if (dm) { 1160d5e6173cSPeter Brune ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSARKIMEX,DMRestrictHook_TSARKIMEX,ts);CHKERRQ(ierr); 1161cdb298fcSPeter Brune ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSARKIMEX,DMSubDomainRestrictHook_TSARKIMEX,ts);CHKERRQ(ierr); 1162d5e6173cSPeter Brune } 11638a381b04SJed Brown PetscFunctionReturn(0); 11648a381b04SJed Brown } 11658a381b04SJed Brown /*------------------------------------------------------------*/ 11668a381b04SJed Brown 11678a381b04SJed Brown #undef __FUNCT__ 11688a381b04SJed Brown #define __FUNCT__ "TSSetFromOptions_ARKIMEX" 11694416b707SBarry Smith static PetscErrorCode TSSetFromOptions_ARKIMEX(PetscOptionItems *PetscOptionsObject,TS ts) 11708a381b04SJed Brown { 11714cc180ffSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 11728a381b04SJed Brown PetscErrorCode ierr; 11738a381b04SJed Brown char arktype[256]; 11748a381b04SJed Brown 11758a381b04SJed Brown PetscFunctionBegin; 1176e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"ARKIMEX ODE solver options");CHKERRQ(ierr); 11778a381b04SJed Brown { 11788a381b04SJed Brown ARKTableauLink link; 11798a381b04SJed Brown PetscInt count,choice; 11808a381b04SJed Brown PetscBool flg; 11818a381b04SJed Brown const char **namelist; 11828caf3d72SBarry Smith ierr = PetscStrncpy(arktype,TSARKIMEXDefault,sizeof(arktype));CHKERRQ(ierr); 11838a381b04SJed Brown for (link=ARKTableauList,count=0; link; link=link->next,count++) ; 1184785e854fSJed Brown ierr = PetscMalloc1(count,&namelist);CHKERRQ(ierr); 11858a381b04SJed Brown for (link=ARKTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 11868a381b04SJed Brown ierr = PetscOptionsEList("-ts_arkimex_type","Family of ARK IMEX method","TSARKIMEXSetType",(const char*const*)namelist,count,arktype,&choice,&flg);CHKERRQ(ierr); 11878a381b04SJed Brown ierr = TSARKIMEXSetType(ts,flg ? namelist[choice] : arktype);CHKERRQ(ierr); 11888a381b04SJed Brown ierr = PetscFree(namelist);CHKERRQ(ierr); 11894cc180ffSJed Brown flg = (PetscBool) !ark->imex; 11900298fd71SBarry Smith ierr = PetscOptionsBool("-ts_arkimex_fully_implicit","Solve the problem fully implicitly","TSARKIMEXSetFullyImplicit",flg,&flg,NULL);CHKERRQ(ierr); 11914cc180ffSJed Brown ark->imex = (PetscBool) !flg; 119256dcabbaSDebojyoti Ghosh ark->init_guess_extrp = PETSC_FALSE; 119356dcabbaSDebojyoti Ghosh ierr = PetscOptionsBool("-ts_arkimex_initial_guess_extrapolate","Extrapolate the initial guess for the stage solution from stage values of the previous time step","",ark->init_guess_extrp,&ark->init_guess_extrp,NULL);CHKERRQ(ierr); 11948a381b04SJed Brown } 11958a381b04SJed Brown ierr = PetscOptionsTail();CHKERRQ(ierr); 11968a381b04SJed Brown PetscFunctionReturn(0); 11978a381b04SJed Brown } 11988a381b04SJed Brown 11998a381b04SJed Brown #undef __FUNCT__ 12008a381b04SJed Brown #define __FUNCT__ "PetscFormatRealArray" 12018a381b04SJed Brown static PetscErrorCode PetscFormatRealArray(char buf[],size_t len,const char *fmt,PetscInt n,const PetscReal x[]) 12028a381b04SJed Brown { 1203257d2499SJed Brown PetscErrorCode ierr; 1204f1d86077SJed Brown PetscInt i; 1205f1d86077SJed Brown size_t left,count; 12068a381b04SJed Brown char *p; 12078a381b04SJed Brown 12088a381b04SJed Brown PetscFunctionBegin; 1209f1d86077SJed Brown for (i=0,p=buf,left=len; i<n; i++) { 1210f1d86077SJed Brown ierr = PetscSNPrintfCount(p,left,fmt,&count,x[i]);CHKERRQ(ierr); 12118a381b04SJed Brown if (count >= left) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Insufficient space in buffer"); 12128a381b04SJed Brown left -= count; 12138a381b04SJed Brown p += count; 12148a381b04SJed Brown *p++ = ' '; 12158a381b04SJed Brown } 12168a381b04SJed Brown p[i ? 0 : -1] = 0; 12178a381b04SJed Brown PetscFunctionReturn(0); 12188a381b04SJed Brown } 12198a381b04SJed Brown 12208a381b04SJed Brown #undef __FUNCT__ 12218a381b04SJed Brown #define __FUNCT__ "TSView_ARKIMEX" 12228a381b04SJed Brown static PetscErrorCode TSView_ARKIMEX(TS ts,PetscViewer viewer) 12238a381b04SJed Brown { 12248a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 12258a381b04SJed Brown PetscBool iascii; 12268a381b04SJed Brown PetscErrorCode ierr; 1227559eea31SJed Brown TSAdapt adapt; 12288a381b04SJed Brown 12298a381b04SJed Brown PetscFunctionBegin; 1230251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 12318a381b04SJed Brown if (iascii) { 1232*9c334d8fSLisandro Dalcin ARKTableau tab = ark->tableau; 123319fd82e9SBarry Smith TSARKIMEXType arktype; 12348a381b04SJed Brown char buf[512]; 12358a381b04SJed Brown ierr = TSARKIMEXGetType(ts,&arktype);CHKERRQ(ierr); 12368a381b04SJed Brown ierr = PetscViewerASCIIPrintf(viewer," ARK IMEX %s\n",arktype);CHKERRQ(ierr); 12378caf3d72SBarry Smith ierr = PetscFormatRealArray(buf,sizeof(buf),"% 8.6f",tab->s,tab->ct);CHKERRQ(ierr); 123831f6fcc0SJed Brown ierr = PetscViewerASCIIPrintf(viewer," Stiff abscissa ct = %s\n",buf);CHKERRQ(ierr); 12398caf3d72SBarry Smith ierr = PetscFormatRealArray(buf,sizeof(buf),"% 8.6f",tab->s,tab->c);CHKERRQ(ierr); 1240e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"Stiffly accurate: %s\n",tab->stiffly_accurate ? "yes" : "no");CHKERRQ(ierr); 1241e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"Explicit first stage: %s\n",tab->explicit_first_stage ? "yes" : "no");CHKERRQ(ierr); 1242e817cc15SEmil Constantinescu ierr = PetscViewerASCIIPrintf(viewer,"FSAL property: %s\n",tab->FSAL_implicit ? "yes" : "no");CHKERRQ(ierr); 124331f6fcc0SJed Brown ierr = PetscViewerASCIIPrintf(viewer," Nonstiff abscissa c = %s\n",buf);CHKERRQ(ierr); 12448a381b04SJed Brown } 1245552698daSJed Brown ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 1246559eea31SJed Brown ierr = TSAdaptView(adapt,viewer);CHKERRQ(ierr); 1247d52bd9f3SBarry Smith ierr = SNESView(ts->snes,viewer);CHKERRQ(ierr); 12488a381b04SJed Brown PetscFunctionReturn(0); 12498a381b04SJed Brown } 12508a381b04SJed Brown 12518a381b04SJed Brown #undef __FUNCT__ 1252f2c2a1b9SBarry Smith #define __FUNCT__ "TSLoad_ARKIMEX" 1253f2c2a1b9SBarry Smith static PetscErrorCode TSLoad_ARKIMEX(TS ts,PetscViewer viewer) 1254f2c2a1b9SBarry Smith { 1255f2c2a1b9SBarry Smith PetscErrorCode ierr; 1256f2c2a1b9SBarry Smith SNES snes; 1257*9c334d8fSLisandro Dalcin TSAdapt adapt; 1258f2c2a1b9SBarry Smith 1259f2c2a1b9SBarry Smith PetscFunctionBegin; 1260*9c334d8fSLisandro Dalcin ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 1261*9c334d8fSLisandro Dalcin ierr = TSAdaptLoad(adapt,viewer);CHKERRQ(ierr); 1262f2c2a1b9SBarry Smith ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 1263f2c2a1b9SBarry Smith ierr = SNESLoad(snes,viewer);CHKERRQ(ierr); 1264ad6bc421SBarry Smith /* function and Jacobian context for SNES when used with TS is always ts object */ 12650298fd71SBarry Smith ierr = SNESSetFunction(snes,NULL,NULL,ts);CHKERRQ(ierr); 12660298fd71SBarry Smith ierr = SNESSetJacobian(snes,NULL,NULL,NULL,ts);CHKERRQ(ierr); 1267f2c2a1b9SBarry Smith PetscFunctionReturn(0); 1268f2c2a1b9SBarry Smith } 1269f2c2a1b9SBarry Smith 1270f2c2a1b9SBarry Smith #undef __FUNCT__ 12718a381b04SJed Brown #define __FUNCT__ "TSARKIMEXSetType" 12728a381b04SJed Brown /*@C 12738a381b04SJed Brown TSARKIMEXSetType - Set the type of ARK IMEX scheme 12748a381b04SJed Brown 12758a381b04SJed Brown Logically collective 12768a381b04SJed Brown 12778a381b04SJed Brown Input Parameter: 12788a381b04SJed Brown + ts - timestepping context 12798a381b04SJed Brown - arktype - type of ARK-IMEX scheme 12808a381b04SJed Brown 12818a381b04SJed Brown Level: intermediate 12828a381b04SJed Brown 1283020d8f30SJed Brown .seealso: TSARKIMEXGetType(), TSARKIMEX, TSARKIMEX2D, TSARKIMEX2E, TSARKIMEXPRSSP2, TSARKIMEX3, TSARKIMEXBPR3, TSARKIMEXARS443, TSARKIMEX4, TSARKIMEX5 12848a381b04SJed Brown @*/ 128519fd82e9SBarry Smith PetscErrorCode TSARKIMEXSetType(TS ts,TSARKIMEXType arktype) 12868a381b04SJed Brown { 12878a381b04SJed Brown PetscErrorCode ierr; 12888a381b04SJed Brown 12898a381b04SJed Brown PetscFunctionBegin; 12908a381b04SJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 129119fd82e9SBarry Smith ierr = PetscTryMethod(ts,"TSARKIMEXSetType_C",(TS,TSARKIMEXType),(ts,arktype));CHKERRQ(ierr); 12928a381b04SJed Brown PetscFunctionReturn(0); 12938a381b04SJed Brown } 12948a381b04SJed Brown 12958a381b04SJed Brown #undef __FUNCT__ 12968a381b04SJed Brown #define __FUNCT__ "TSARKIMEXGetType" 12978a381b04SJed Brown /*@C 12988a381b04SJed Brown TSARKIMEXGetType - Get the type of ARK IMEX scheme 12998a381b04SJed Brown 13008a381b04SJed Brown Logically collective 13018a381b04SJed Brown 13028a381b04SJed Brown Input Parameter: 13038a381b04SJed Brown . ts - timestepping context 13048a381b04SJed Brown 13058a381b04SJed Brown Output Parameter: 13068a381b04SJed Brown . arktype - type of ARK-IMEX scheme 13078a381b04SJed Brown 13088a381b04SJed Brown Level: intermediate 13098a381b04SJed Brown 13108a381b04SJed Brown .seealso: TSARKIMEXGetType() 13118a381b04SJed Brown @*/ 131219fd82e9SBarry Smith PetscErrorCode TSARKIMEXGetType(TS ts,TSARKIMEXType *arktype) 13138a381b04SJed Brown { 13148a381b04SJed Brown PetscErrorCode ierr; 13158a381b04SJed Brown 13168a381b04SJed Brown PetscFunctionBegin; 13178a381b04SJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 131819fd82e9SBarry Smith ierr = PetscUseMethod(ts,"TSARKIMEXGetType_C",(TS,TSARKIMEXType*),(ts,arktype));CHKERRQ(ierr); 13198a381b04SJed Brown PetscFunctionReturn(0); 13208a381b04SJed Brown } 13218a381b04SJed Brown 13224cc180ffSJed Brown #undef __FUNCT__ 13234cc180ffSJed Brown #define __FUNCT__ "TSARKIMEXSetFullyImplicit" 132416353aafSBarry Smith /*@ 13254cc180ffSJed Brown TSARKIMEXSetFullyImplicit - Solve both parts of the equation implicitly 13264cc180ffSJed Brown 13274cc180ffSJed Brown Logically collective 13284cc180ffSJed Brown 13294cc180ffSJed Brown Input Parameter: 13304cc180ffSJed Brown + ts - timestepping context 13314cc180ffSJed Brown - flg - PETSC_TRUE for fully implicit 13324cc180ffSJed Brown 13334cc180ffSJed Brown Level: intermediate 13344cc180ffSJed Brown 13354cc180ffSJed Brown .seealso: TSARKIMEXGetType() 13364cc180ffSJed Brown @*/ 13374cc180ffSJed Brown PetscErrorCode TSARKIMEXSetFullyImplicit(TS ts,PetscBool flg) 13384cc180ffSJed Brown { 13394cc180ffSJed Brown PetscErrorCode ierr; 13404cc180ffSJed Brown 13414cc180ffSJed Brown PetscFunctionBegin; 13424cc180ffSJed Brown PetscValidHeaderSpecific(ts,TS_CLASSID,1); 13434cc180ffSJed Brown ierr = PetscTryMethod(ts,"TSARKIMEXSetFullyImplicit_C",(TS,PetscBool),(ts,flg));CHKERRQ(ierr); 13444cc180ffSJed Brown PetscFunctionReturn(0); 13454cc180ffSJed Brown } 13464cc180ffSJed Brown 13478a381b04SJed Brown #undef __FUNCT__ 13488a381b04SJed Brown #define __FUNCT__ "TSARKIMEXGetType_ARKIMEX" 1349e0877f53SBarry Smith static PetscErrorCode TSARKIMEXGetType_ARKIMEX(TS ts,TSARKIMEXType *arktype) 13508a381b04SJed Brown { 13518a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13528a381b04SJed Brown PetscErrorCode ierr; 13538a381b04SJed Brown 13548a381b04SJed Brown PetscFunctionBegin; 1355f2c2a1b9SBarry Smith if (!ark->tableau) { 1356f2c2a1b9SBarry Smith ierr = TSARKIMEXSetType(ts,TSARKIMEXDefault);CHKERRQ(ierr); 1357f2c2a1b9SBarry Smith } 13588a381b04SJed Brown *arktype = ark->tableau->name; 13598a381b04SJed Brown PetscFunctionReturn(0); 13608a381b04SJed Brown } 13618a381b04SJed Brown #undef __FUNCT__ 13628a381b04SJed Brown #define __FUNCT__ "TSARKIMEXSetType_ARKIMEX" 1363e0877f53SBarry Smith static PetscErrorCode TSARKIMEXSetType_ARKIMEX(TS ts,TSARKIMEXType arktype) 13648a381b04SJed Brown { 13658a381b04SJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13668a381b04SJed Brown PetscErrorCode ierr; 13678a381b04SJed Brown PetscBool match; 13688a381b04SJed Brown ARKTableauLink link; 13698a381b04SJed Brown 13708a381b04SJed Brown PetscFunctionBegin; 13718a381b04SJed Brown if (ark->tableau) { 13728a381b04SJed Brown ierr = PetscStrcmp(ark->tableau->name,arktype,&match);CHKERRQ(ierr); 13738a381b04SJed Brown if (match) PetscFunctionReturn(0); 13748a381b04SJed Brown } 13758a381b04SJed Brown for (link = ARKTableauList; link; link=link->next) { 13768a381b04SJed Brown ierr = PetscStrcmp(link->tab.name,arktype,&match);CHKERRQ(ierr); 13778a381b04SJed Brown if (match) { 13788a381b04SJed Brown ierr = TSReset_ARKIMEX(ts);CHKERRQ(ierr); 13798a381b04SJed Brown ark->tableau = &link->tab; 13808a381b04SJed Brown PetscFunctionReturn(0); 13818a381b04SJed Brown } 13828a381b04SJed Brown } 1383ce94432eSBarry Smith SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",arktype); 13848a381b04SJed Brown PetscFunctionReturn(0); 13858a381b04SJed Brown } 1386e0877f53SBarry Smith 13874cc180ffSJed Brown #undef __FUNCT__ 13884cc180ffSJed Brown #define __FUNCT__ "TSARKIMEXSetFullyImplicit_ARKIMEX" 1389e0877f53SBarry Smith static PetscErrorCode TSARKIMEXSetFullyImplicit_ARKIMEX(TS ts,PetscBool flg) 13904cc180ffSJed Brown { 13914cc180ffSJed Brown TS_ARKIMEX *ark = (TS_ARKIMEX*)ts->data; 13924cc180ffSJed Brown 13934cc180ffSJed Brown PetscFunctionBegin; 13944cc180ffSJed Brown ark->imex = (PetscBool)!flg; 13954cc180ffSJed Brown PetscFunctionReturn(0); 13964cc180ffSJed Brown } 13978a381b04SJed Brown 13988a381b04SJed Brown /* ------------------------------------------------------------ */ 13998a381b04SJed Brown /*MC 1400a4386c9eSJed Brown TSARKIMEX - ODE and DAE solver using Additive Runge-Kutta IMEX schemes 14018a381b04SJed Brown 1402fca742c7SJed Brown These methods are intended for problems with well-separated time scales, especially when a slow scale is strongly 1403fca742c7SJed Brown nonlinear such that it is expensive to solve with a fully implicit method. The user should provide the stiff part 1404fca742c7SJed Brown of the equation using TSSetIFunction() and the non-stiff part with TSSetRHSFunction(). 1405fca742c7SJed Brown 1406fca742c7SJed Brown Notes: 1407a4386c9eSJed Brown The default is TSARKIMEX3, it can be changed with TSARKIMEXSetType() or -ts_arkimex_type 1408c8058688SBarry Smith 14095eca1a21SEmil Constantinescu If the equation is implicit or a DAE, then TSSetEquationType() needs to be set accordingly. Refer to the manual for further information. 14105eca1a21SEmil Constantinescu 1411a4386c9eSJed Brown Methods with an explicit stage can only be used with ODE in which the stiff part G(t,X,Xdot) has the form Xdot + Ghat(t,X). 1412fca742c7SJed Brown 1413d0685a90SJed Brown Consider trying TSROSW if the stiff part is linear or weakly nonlinear. 1414d0685a90SJed Brown 14158a381b04SJed Brown Level: beginner 14168a381b04SJed Brown 1417d0685a90SJed Brown .seealso: TSCreate(), TS, TSSetType(), TSARKIMEXSetType(), TSARKIMEXGetType(), TSARKIMEXSetFullyImplicit(), TSARKIMEX1BEE, 1418d0685a90SJed Brown TSARKIMEX2C, TSARKIMEX2D, TSARKIMEX2E, TSARKIMEX3, TSARKIMEXL2, TSARKIMEXA2, TSARKIMEXARS122, 1419d0685a90SJed Brown TSARKIMEX4, TSARKIMEX5, TSARKIMEXPRSSP2, TSARKIMEXARS443, TSARKIMEXBPR3, TSARKIMEXType, TSARKIMEXRegister() 14208a381b04SJed Brown 14218a381b04SJed Brown M*/ 14228a381b04SJed Brown #undef __FUNCT__ 14238a381b04SJed Brown #define __FUNCT__ "TSCreate_ARKIMEX" 14248cc058d9SJed Brown PETSC_EXTERN PetscErrorCode TSCreate_ARKIMEX(TS ts) 14258a381b04SJed Brown { 14268a381b04SJed Brown TS_ARKIMEX *th; 14278a381b04SJed Brown PetscErrorCode ierr; 14288a381b04SJed Brown 14298a381b04SJed Brown PetscFunctionBegin; 1430607a6623SBarry Smith ierr = TSARKIMEXInitializePackage();CHKERRQ(ierr); 14318a381b04SJed Brown 14328a381b04SJed Brown ts->ops->reset = TSReset_ARKIMEX; 14338a381b04SJed Brown ts->ops->destroy = TSDestroy_ARKIMEX; 14348a381b04SJed Brown ts->ops->view = TSView_ARKIMEX; 1435f2c2a1b9SBarry Smith ts->ops->load = TSLoad_ARKIMEX; 14368a381b04SJed Brown ts->ops->setup = TSSetUp_ARKIMEX; 14378a381b04SJed Brown ts->ops->step = TSStep_ARKIMEX; 1438cd652676SJed Brown ts->ops->interpolate = TSInterpolate_ARKIMEX; 1439108c343cSJed Brown ts->ops->evaluatestep = TSEvaluateStep_ARKIMEX; 144024655328SShri ts->ops->rollback = TSRollBack_ARKIMEX; 14418a381b04SJed Brown ts->ops->setfromoptions = TSSetFromOptions_ARKIMEX; 14428a381b04SJed Brown ts->ops->snesfunction = SNESTSFormFunction_ARKIMEX; 14438a381b04SJed Brown ts->ops->snesjacobian = SNESTSFormJacobian_ARKIMEX; 14448a381b04SJed Brown 1445b00a9115SJed Brown ierr = PetscNewLog(ts,&th);CHKERRQ(ierr); 14468a381b04SJed Brown ts->data = (void*)th; 14474cc180ffSJed Brown th->imex = PETSC_TRUE; 14488a381b04SJed Brown 1449bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXGetType_C",TSARKIMEXGetType_ARKIMEX);CHKERRQ(ierr); 1450bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetType_C",TSARKIMEXSetType_ARKIMEX);CHKERRQ(ierr); 1451bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)ts,"TSARKIMEXSetFullyImplicit_C",TSARKIMEXSetFullyImplicit_ARKIMEX);CHKERRQ(ierr); 14528a381b04SJed Brown PetscFunctionReturn(0); 14538a381b04SJed Brown } 1454