xref: /petsc/src/ts/impls/eimex/eimex.c (revision 1d27aa22b2f6148b2c4e3f06a75e0638d6493e09)
1af0996ceSBarry Smith #include <petsc/private/tsimpl.h> /*I   "petscts.h"   I*/
24042b796SJed Brown #include <petscdm.h>
37d5697caSHong Zhang 
47d5697caSHong Zhang static const PetscInt TSEIMEXDefault = 3;
57d5697caSHong Zhang 
67d5697caSHong Zhang typedef struct {
77d5697caSHong Zhang   PetscInt     row_ind;    /* Return the term T[row_ind][col_ind] */
87d5697caSHong Zhang   PetscInt     col_ind;    /* Return the term T[row_ind][col_ind] */
97d5697caSHong Zhang   PetscInt     nstages;    /* Numbers of stages in current scheme */
107d5697caSHong Zhang   PetscInt     max_rows;   /* Maximum number of rows */
117d5697caSHong Zhang   PetscInt    *N;          /* Harmonic sequence N[max_rows] */
127d5697caSHong Zhang   Vec          Y;          /* States computed during the step, used to complete the step */
137d5697caSHong Zhang   Vec          Z;          /* For shift*(Y-Z) */
147d5697caSHong Zhang   Vec         *T;          /* Working table, size determined by nstages */
157d5697caSHong Zhang   Vec          YdotRHS;    /* f(x) Work vector holding YdotRHS during residual evaluation */
167d5697caSHong Zhang   Vec          YdotI;      /* xdot-g(x) Work vector holding YdotI = G(t,x,xdot) when xdot =0 */
177d5697caSHong Zhang   Vec          Ydot;       /* f(x)+g(x) Work vector */
187d5697caSHong Zhang   Vec          VecSolPrev; /* Work vector holding the solution from the previous step (used for interpolation) */
197d5697caSHong Zhang   PetscReal    shift;
207d5697caSHong Zhang   PetscReal    ctime;
217d5697caSHong Zhang   PetscBool    recompute_jacobian; /* Recompute the Jacobian at each stage, default is to freeze the Jacobian at the start of each step */
227d5697caSHong Zhang   PetscBool    ord_adapt;          /* order adapativity */
237d5697caSHong Zhang   TSStepStatus status;
247d5697caSHong Zhang } TS_EIMEX;
257d5697caSHong Zhang 
267d5697caSHong Zhang /* This function is pure */
27d71ae5a4SJacob Faibussowitsch static PetscInt Map(PetscInt i, PetscInt j, PetscInt s)
28d71ae5a4SJacob Faibussowitsch {
297d5697caSHong Zhang   return ((2 * s - j + 1) * j / 2 + i - j);
307d5697caSHong Zhang }
317d5697caSHong Zhang 
32d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEvaluateStep_EIMEX(TS ts, PetscInt order, Vec X, PetscBool *done)
33d71ae5a4SJacob Faibussowitsch {
347d5697caSHong Zhang   TS_EIMEX      *ext = (TS_EIMEX *)ts->data;
357d5697caSHong Zhang   const PetscInt ns  = ext->nstages;
367d5697caSHong Zhang   PetscFunctionBegin;
379566063dSJacob Faibussowitsch   PetscCall(VecCopy(ext->T[Map(ext->row_ind, ext->col_ind, ns)], X));
383ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
397d5697caSHong Zhang }
407d5697caSHong Zhang 
41d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSStage_EIMEX(TS ts, PetscInt istage)
42d71ae5a4SJacob Faibussowitsch {
437d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
447d5697caSHong Zhang   PetscReal h;
457d5697caSHong Zhang   Vec       Y = ext->Y, Z = ext->Z;
467d5697caSHong Zhang   SNES      snes;
477d5697caSHong Zhang   TSAdapt   adapt;
487d5697caSHong Zhang   PetscInt  i, its, lits;
497d5697caSHong Zhang   PetscBool accept;
507d5697caSHong Zhang 
517d5697caSHong Zhang   PetscFunctionBegin;
529566063dSJacob Faibussowitsch   PetscCall(TSGetSNES(ts, &snes));
537d5697caSHong Zhang   h          = ts->time_step / ext->N[istage]; /* step size for the istage-th stage */
547d5697caSHong Zhang   ext->shift = 1. / h;
559566063dSJacob Faibussowitsch   PetscCall(SNESSetLagJacobian(snes, -2)); /* Recompute the Jacobian on this solve, but not again */
569566063dSJacob Faibussowitsch   PetscCall(VecCopy(ext->VecSolPrev, Y));  /* Take the previous solution as initial step */
577d5697caSHong Zhang 
587d5697caSHong Zhang   for (i = 0; i < ext->N[istage]; i++) {
597d5697caSHong Zhang     ext->ctime = ts->ptime + h * i;
609566063dSJacob Faibussowitsch     PetscCall(VecCopy(Y, Z)); /* Save the solution of the previous substep */
619566063dSJacob Faibussowitsch     PetscCall(SNESSolve(snes, NULL, Y));
629566063dSJacob Faibussowitsch     PetscCall(SNESGetIterationNumber(snes, &its));
639566063dSJacob Faibussowitsch     PetscCall(SNESGetLinearSolveIterations(snes, &lits));
649371c9d4SSatish Balay     ts->snes_its += its;
659371c9d4SSatish Balay     ts->ksp_its += lits;
669566063dSJacob Faibussowitsch     PetscCall(TSGetAdapt(ts, &adapt));
679566063dSJacob Faibussowitsch     PetscCall(TSAdaptCheckStage(adapt, ts, ext->ctime, Y, &accept));
687d5697caSHong Zhang   }
693ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
707d5697caSHong Zhang }
717d5697caSHong Zhang 
72d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSStep_EIMEX(TS ts)
73d71ae5a4SJacob Faibussowitsch {
747d5697caSHong Zhang   TS_EIMEX      *ext = (TS_EIMEX *)ts->data;
757d5697caSHong Zhang   const PetscInt ns  = ext->nstages;
767d5697caSHong Zhang   Vec           *T = ext->T, Y = ext->Y;
777d5697caSHong Zhang   SNES           snes;
787d5697caSHong Zhang   PetscInt       i, j;
797d5697caSHong Zhang   PetscBool      accept = PETSC_FALSE;
807453f775SEmil Constantinescu   PetscReal      alpha, local_error, local_error_a, local_error_r;
817d5697caSHong Zhang 
82d0609cedSBarry Smith   PetscFunctionBegin;
839566063dSJacob Faibussowitsch   PetscCall(TSGetSNES(ts, &snes));
849566063dSJacob Faibussowitsch   PetscCall(SNESSetType(snes, "ksponly"));
857d5697caSHong Zhang   ext->status = TS_STEP_INCOMPLETE;
867d5697caSHong Zhang 
879566063dSJacob Faibussowitsch   PetscCall(VecCopy(ts->vec_sol, ext->VecSolPrev));
887d5697caSHong Zhang 
897d5697caSHong Zhang   /* Apply n_j steps of the base method to obtain solutions of T(j,1),1<=j<=s */
907d5697caSHong Zhang   for (j = 0; j < ns; j++) {
919566063dSJacob Faibussowitsch     PetscCall(TSStage_EIMEX(ts, j));
929566063dSJacob Faibussowitsch     PetscCall(VecCopy(Y, T[j]));
937d5697caSHong Zhang   }
947d5697caSHong Zhang 
957d5697caSHong Zhang   for (i = 1; i < ns; i++) {
967d5697caSHong Zhang     for (j = i; j < ns; j++) {
977d5697caSHong Zhang       alpha = -(PetscReal)ext->N[j] / ext->N[j - i];
98d0609cedSBarry Smith       PetscCall(VecAXPBYPCZ(T[Map(j, i, ns)], alpha, 1.0, 0, T[Map(j, i - 1, ns)], T[Map(j - 1, i - 1, ns)])); /* T[j][i]=alpha*T[j][i-1]+T[j-1][i-1] */
997d5697caSHong Zhang       alpha = 1.0 / (1.0 + alpha);
1009566063dSJacob Faibussowitsch       PetscCall(VecScale(T[Map(j, i, ns)], alpha));
1017d5697caSHong Zhang     }
1027d5697caSHong Zhang   }
1037d5697caSHong Zhang 
1049566063dSJacob Faibussowitsch   PetscCall(TSEvaluateStep(ts, ns, ts->vec_sol, NULL)); /*update ts solution */
1057d5697caSHong Zhang 
1067d5697caSHong Zhang   if (ext->ord_adapt && ext->nstages < ext->max_rows) {
1077d5697caSHong Zhang     accept = PETSC_FALSE;
1087d5697caSHong Zhang     while (!accept && ext->nstages < ext->max_rows) {
1099566063dSJacob Faibussowitsch       PetscCall(TSErrorWeightedNorm(ts, ts->vec_sol, T[Map(ext->nstages - 1, ext->nstages - 2, ext->nstages)], ts->adapt->wnormtype, &local_error, &local_error_a, &local_error_r));
1107d5697caSHong Zhang       accept = (local_error < 1.0) ? PETSC_TRUE : PETSC_FALSE;
1117d5697caSHong Zhang 
1127d5697caSHong Zhang       if (!accept) { /* add one more stage*/
1139566063dSJacob Faibussowitsch         PetscCall(TSStage_EIMEX(ts, ext->nstages));
1149371c9d4SSatish Balay         ext->nstages++;
1159371c9d4SSatish Balay         ext->row_ind++;
1169371c9d4SSatish Balay         ext->col_ind++;
1177d5697caSHong Zhang         /*T table need to be recycled*/
1189566063dSJacob Faibussowitsch         PetscCall(VecDuplicateVecs(ts->vec_sol, (1 + ext->nstages) * ext->nstages / 2, &ext->T));
1197d5697caSHong Zhang         for (i = 0; i < ext->nstages - 1; i++) {
12048a46eb9SPierre Jolivet           for (j = 0; j <= i; j++) PetscCall(VecCopy(T[Map(i, j, ext->nstages - 1)], ext->T[Map(i, j, ext->nstages)]));
1217d5697caSHong Zhang         }
1229566063dSJacob Faibussowitsch         PetscCall(VecDestroyVecs(ext->nstages * (ext->nstages - 1) / 2, &T));
1237d5697caSHong Zhang         T = ext->T; /*reset the pointer*/
1247d5697caSHong Zhang         /*recycling finished, store the new solution*/
1259566063dSJacob Faibussowitsch         PetscCall(VecCopy(Y, T[ext->nstages - 1]));
1267d5697caSHong Zhang         /*extrapolation for the newly added stage*/
1277d5697caSHong Zhang         for (i = 1; i < ext->nstages; i++) {
1287d5697caSHong Zhang           alpha = -(PetscReal)ext->N[ext->nstages - 1] / ext->N[ext->nstages - 1 - i];
129d0609cedSBarry Smith           PetscCall(VecAXPBYPCZ(T[Map(ext->nstages - 1, i, ext->nstages)], alpha, 1.0, 0, T[Map(ext->nstages - 1, i - 1, ext->nstages)], T[Map(ext->nstages - 1 - 1, i - 1, ext->nstages)])); /*T[ext->nstages-1][i]=alpha*T[ext->nstages-1][i-1]+T[ext->nstages-1-1][i-1]*/
1307d5697caSHong Zhang           alpha = 1.0 / (1.0 + alpha);
1319566063dSJacob Faibussowitsch           PetscCall(VecScale(T[Map(ext->nstages - 1, i, ext->nstages)], alpha));
1327d5697caSHong Zhang         }
1337d5697caSHong Zhang         /*update ts solution */
1349566063dSJacob Faibussowitsch         PetscCall(TSEvaluateStep(ts, ext->nstages, ts->vec_sol, NULL));
1357d5697caSHong Zhang       } /*end if !accept*/
1367d5697caSHong Zhang     }   /*end while*/
1377d5697caSHong Zhang 
13848a46eb9SPierre Jolivet     if (ext->nstages == ext->max_rows) PetscCall(PetscInfo(ts, "Max number of rows has been used\n"));
1397d5697caSHong Zhang   } /*end if ext->ord_adapt*/
1407d5697caSHong Zhang   ts->ptime += ts->time_step;
1417d5697caSHong Zhang   ext->status = TS_STEP_COMPLETE;
1427d5697caSHong Zhang 
1437d5697caSHong Zhang   if (ext->status != TS_STEP_COMPLETE && !ts->reason) ts->reason = TS_DIVERGED_STEP_REJECTED;
1443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1457d5697caSHong Zhang }
1467d5697caSHong Zhang 
1477d5697caSHong Zhang /* cubic Hermit spline */
148d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSInterpolate_EIMEX(TS ts, PetscReal itime, Vec X)
149d71ae5a4SJacob Faibussowitsch {
1507d5697caSHong Zhang   TS_EIMEX       *ext = (TS_EIMEX *)ts->data;
1517d5697caSHong Zhang   PetscReal       t, a, b;
152be5899b3SLisandro Dalcin   Vec             Y0 = ext->VecSolPrev, Y1 = ext->Y, Ydot = ext->Ydot, YdotI = ext->YdotI;
153be5899b3SLisandro Dalcin   const PetscReal h = ts->ptime - ts->ptime_prev;
1547d5697caSHong Zhang   PetscFunctionBegin;
1557d5697caSHong Zhang   t = (itime - ts->ptime + h) / h;
1567d5697caSHong Zhang   /* YdotI = -f(x)-g(x) */
1577d5697caSHong Zhang 
1589566063dSJacob Faibussowitsch   PetscCall(VecZeroEntries(Ydot));
1599566063dSJacob Faibussowitsch   PetscCall(TSComputeIFunction(ts, ts->ptime - h, Y0, Ydot, YdotI, PETSC_FALSE));
1607d5697caSHong Zhang 
16116dc5bacSEmil Constantinescu   a = 2.0 * t * t * t - 3.0 * t * t + 1.0;
16216dc5bacSEmil Constantinescu   b = -(t * t * t - 2.0 * t * t + t) * h;
1639566063dSJacob Faibussowitsch   PetscCall(VecAXPBYPCZ(X, a, b, 0.0, Y0, YdotI));
1647d5697caSHong Zhang 
1659566063dSJacob Faibussowitsch   PetscCall(TSComputeIFunction(ts, ts->ptime, Y1, Ydot, YdotI, PETSC_FALSE));
16616dc5bacSEmil Constantinescu   a = -2.0 * t * t * t + 3.0 * t * t;
16716dc5bacSEmil Constantinescu   b = -(t * t * t - t * t) * h;
1689566063dSJacob Faibussowitsch   PetscCall(VecAXPBYPCZ(X, a, b, 1.0, Y1, YdotI));
1697d5697caSHong Zhang 
1703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1717d5697caSHong Zhang }
1727d5697caSHong Zhang 
173d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSReset_EIMEX(TS ts)
174d71ae5a4SJacob Faibussowitsch {
1757d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
1767d5697caSHong Zhang   PetscInt  ns;
1777d5697caSHong Zhang 
1787d5697caSHong Zhang   PetscFunctionBegin;
1797d5697caSHong Zhang   ns = ext->nstages;
1809566063dSJacob Faibussowitsch   PetscCall(VecDestroyVecs((1 + ns) * ns / 2, &ext->T));
1819566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->Y));
1829566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->Z));
1839566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->YdotRHS));
1849566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->YdotI));
1859566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->Ydot));
1869566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&ext->VecSolPrev));
1879566063dSJacob Faibussowitsch   PetscCall(PetscFree(ext->N));
1883ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1897d5697caSHong Zhang }
1907d5697caSHong Zhang 
191d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSDestroy_EIMEX(TS ts)
192d71ae5a4SJacob Faibussowitsch {
1937d5697caSHong Zhang   PetscFunctionBegin;
1949566063dSJacob Faibussowitsch   PetscCall(TSReset_EIMEX(ts));
1959566063dSJacob Faibussowitsch   PetscCall(PetscFree(ts->data));
1969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetMaxRows_C", NULL));
1979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetRowCol_C", NULL));
1989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetOrdAdapt_C", NULL));
1993ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2007d5697caSHong Zhang }
2017d5697caSHong Zhang 
202d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEIMEXGetVecs(TS ts, DM dm, Vec *Z, Vec *Ydot, Vec *YdotI, Vec *YdotRHS)
203d71ae5a4SJacob Faibussowitsch {
2047d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
2057d5697caSHong Zhang 
2067d5697caSHong Zhang   PetscFunctionBegin;
2077d5697caSHong Zhang   if (Z) {
2087d5697caSHong Zhang     if (dm && dm != ts->dm) {
2099566063dSJacob Faibussowitsch       PetscCall(DMGetNamedGlobalVector(dm, "TSEIMEX_Z", Z));
2107d5697caSHong Zhang     } else *Z = ext->Z;
2117d5697caSHong Zhang   }
2127d5697caSHong Zhang   if (Ydot) {
2137d5697caSHong Zhang     if (dm && dm != ts->dm) {
2149566063dSJacob Faibussowitsch       PetscCall(DMGetNamedGlobalVector(dm, "TSEIMEX_Ydot", Ydot));
2157d5697caSHong Zhang     } else *Ydot = ext->Ydot;
2167d5697caSHong Zhang   }
2177d5697caSHong Zhang   if (YdotI) {
2187d5697caSHong Zhang     if (dm && dm != ts->dm) {
2199566063dSJacob Faibussowitsch       PetscCall(DMGetNamedGlobalVector(dm, "TSEIMEX_YdotI", YdotI));
2207d5697caSHong Zhang     } else *YdotI = ext->YdotI;
2217d5697caSHong Zhang   }
2227d5697caSHong Zhang   if (YdotRHS) {
2237d5697caSHong Zhang     if (dm && dm != ts->dm) {
2249566063dSJacob Faibussowitsch       PetscCall(DMGetNamedGlobalVector(dm, "TSEIMEX_YdotRHS", YdotRHS));
2257d5697caSHong Zhang     } else *YdotRHS = ext->YdotRHS;
2267d5697caSHong Zhang   }
2273ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2287d5697caSHong Zhang }
2297d5697caSHong Zhang 
230d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEIMEXRestoreVecs(TS ts, DM dm, Vec *Z, Vec *Ydot, Vec *YdotI, Vec *YdotRHS)
231d71ae5a4SJacob Faibussowitsch {
2327d5697caSHong Zhang   PetscFunctionBegin;
2337d5697caSHong Zhang   if (Z) {
23448a46eb9SPierre Jolivet     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSEIMEX_Z", Z));
2357d5697caSHong Zhang   }
2367d5697caSHong Zhang   if (Ydot) {
23748a46eb9SPierre Jolivet     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSEIMEX_Ydot", Ydot));
2387d5697caSHong Zhang   }
2397d5697caSHong Zhang   if (YdotI) {
24048a46eb9SPierre Jolivet     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSEIMEX_YdotI", YdotI));
2417d5697caSHong Zhang   }
2427d5697caSHong Zhang   if (YdotRHS) {
24348a46eb9SPierre Jolivet     if (dm && dm != ts->dm) PetscCall(DMRestoreNamedGlobalVector(dm, "TSEIMEX_YdotRHS", YdotRHS));
2447d5697caSHong Zhang   }
2453ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2467d5697caSHong Zhang }
2477d5697caSHong Zhang 
2487d5697caSHong Zhang /*
2497d5697caSHong Zhang   This defines the nonlinear equation that is to be solved with SNES
2507d5697caSHong Zhang   Fn[t0+Theta*dt, U, (U-U0)*shift] = 0
2517d5697caSHong Zhang   In the case of Backward Euler, Fn = (U-U0)/h-g(t1,U))
2527d5697caSHong Zhang   Since FormIFunction calculates G = ydot - g(t,y), ydot will be set to (U-U0)/h
2537d5697caSHong Zhang */
254d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESTSFormFunction_EIMEX(SNES snes, Vec X, Vec G, TS ts)
255d71ae5a4SJacob Faibussowitsch {
2567d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
2577d5697caSHong Zhang   Vec       Ydot, Z;
2587d5697caSHong Zhang   DM        dm, dmsave;
2597d5697caSHong Zhang 
2607d5697caSHong Zhang   PetscFunctionBegin;
2619566063dSJacob Faibussowitsch   PetscCall(VecZeroEntries(G));
2627d5697caSHong Zhang 
2639566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
2649566063dSJacob Faibussowitsch   PetscCall(TSEIMEXGetVecs(ts, dm, &Z, &Ydot, NULL, NULL));
2659566063dSJacob Faibussowitsch   PetscCall(VecZeroEntries(Ydot));
2667d5697caSHong Zhang   dmsave = ts->dm;
2677d5697caSHong Zhang   ts->dm = dm;
2689566063dSJacob Faibussowitsch   PetscCall(TSComputeIFunction(ts, ext->ctime, X, Ydot, G, PETSC_FALSE));
2697d5697caSHong Zhang   /* PETSC_FALSE indicates non-imex, adding explicit RHS to the implicit I function.  */
2709566063dSJacob Faibussowitsch   PetscCall(VecCopy(G, Ydot));
2717d5697caSHong Zhang   ts->dm = dmsave;
2729566063dSJacob Faibussowitsch   PetscCall(TSEIMEXRestoreVecs(ts, dm, &Z, &Ydot, NULL, NULL));
2737d5697caSHong Zhang 
2743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2757d5697caSHong Zhang }
2767d5697caSHong Zhang 
2777d5697caSHong Zhang /*
2787d5697caSHong Zhang  This defined the Jacobian matrix for SNES. Jn = (I/h-g'(t,y))
2797d5697caSHong Zhang  */
280d71ae5a4SJacob Faibussowitsch static PetscErrorCode SNESTSFormJacobian_EIMEX(SNES snes, Vec X, Mat A, Mat B, TS ts)
281d71ae5a4SJacob Faibussowitsch {
2827d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
2837d5697caSHong Zhang   Vec       Ydot;
2847d5697caSHong Zhang   DM        dm, dmsave;
2857d5697caSHong Zhang   PetscFunctionBegin;
2869566063dSJacob Faibussowitsch   PetscCall(SNESGetDM(snes, &dm));
2879566063dSJacob Faibussowitsch   PetscCall(TSEIMEXGetVecs(ts, dm, NULL, &Ydot, NULL, NULL));
2889566063dSJacob Faibussowitsch   /*  PetscCall(VecZeroEntries(Ydot)); */
2897d5697caSHong Zhang   /* ext->Ydot have already been computed in SNESTSFormFunction_EIMEX (SNES guarantees this) */
2907d5697caSHong Zhang   dmsave = ts->dm;
2917d5697caSHong Zhang   ts->dm = dm;
2929566063dSJacob Faibussowitsch   PetscCall(TSComputeIJacobian(ts, ts->ptime, X, Ydot, ext->shift, A, B, PETSC_TRUE));
2937d5697caSHong Zhang   ts->dm = dmsave;
2949566063dSJacob Faibussowitsch   PetscCall(TSEIMEXRestoreVecs(ts, dm, NULL, &Ydot, NULL, NULL));
2953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2967d5697caSHong Zhang }
2977d5697caSHong Zhang 
298d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMCoarsenHook_TSEIMEX(DM fine, DM coarse, void *ctx)
299d71ae5a4SJacob Faibussowitsch {
3007d5697caSHong Zhang   PetscFunctionBegin;
3013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3027d5697caSHong Zhang }
3037d5697caSHong Zhang 
304d71ae5a4SJacob Faibussowitsch static PetscErrorCode DMRestrictHook_TSEIMEX(DM fine, Mat restrct, Vec rscale, Mat inject, DM coarse, void *ctx)
305d71ae5a4SJacob Faibussowitsch {
3067d5697caSHong Zhang   TS  ts = (TS)ctx;
3077d5697caSHong Zhang   Vec Z, Z_c;
3087d5697caSHong Zhang 
3097d5697caSHong Zhang   PetscFunctionBegin;
3109566063dSJacob Faibussowitsch   PetscCall(TSEIMEXGetVecs(ts, fine, &Z, NULL, NULL, NULL));
3119566063dSJacob Faibussowitsch   PetscCall(TSEIMEXGetVecs(ts, coarse, &Z_c, NULL, NULL, NULL));
3129566063dSJacob Faibussowitsch   PetscCall(MatRestrict(restrct, Z, Z_c));
3139566063dSJacob Faibussowitsch   PetscCall(VecPointwiseMult(Z_c, rscale, Z_c));
3149566063dSJacob Faibussowitsch   PetscCall(TSEIMEXRestoreVecs(ts, fine, &Z, NULL, NULL, NULL));
3159566063dSJacob Faibussowitsch   PetscCall(TSEIMEXRestoreVecs(ts, coarse, &Z_c, NULL, NULL, NULL));
3163ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3177d5697caSHong Zhang }
3187d5697caSHong Zhang 
319d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSSetUp_EIMEX(TS ts)
320d71ae5a4SJacob Faibussowitsch {
3217d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
3227d5697caSHong Zhang   DM        dm;
3237d5697caSHong Zhang 
324955c1f14SBarry Smith   PetscFunctionBegin;
3257d5697caSHong Zhang   if (!ext->N) { /* ext->max_rows not set */
3269566063dSJacob Faibussowitsch     PetscCall(TSEIMEXSetMaxRows(ts, TSEIMEXDefault));
3277d5697caSHong Zhang   }
3287d5697caSHong Zhang   if (-1 == ext->row_ind && -1 == ext->col_ind) {
3299566063dSJacob Faibussowitsch     PetscCall(TSEIMEXSetRowCol(ts, ext->max_rows, ext->max_rows));
3307d5697caSHong Zhang   } else { /* ext->row_ind and col_ind already set */
33148a46eb9SPierre Jolivet     if (ext->ord_adapt) PetscCall(PetscInfo(ts, "Order adaptivity is enabled and TSEIMEXSetRowCol or -ts_eimex_row_col option will take no effect\n"));
3327d5697caSHong Zhang   }
3337d5697caSHong Zhang 
3347d5697caSHong Zhang   if (ext->ord_adapt) {
3357d5697caSHong Zhang     ext->nstages = 2; /* Start with the 2-stage scheme */
3369566063dSJacob Faibussowitsch     PetscCall(TSEIMEXSetRowCol(ts, ext->nstages, ext->nstages));
3377d5697caSHong Zhang   } else {
3387d5697caSHong Zhang     ext->nstages = ext->max_rows; /* by default nstages is the same as max_rows, this can be changed by setting order adaptivity */
3397d5697caSHong Zhang   }
3407d5697caSHong Zhang 
3419566063dSJacob Faibussowitsch   PetscCall(TSGetAdapt(ts, &ts->adapt));
3422ffb9264SLisandro Dalcin 
3439566063dSJacob Faibussowitsch   PetscCall(VecDuplicateVecs(ts->vec_sol, (1 + ext->nstages) * ext->nstages / 2, &ext->T)); /* full T table */
3449566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->YdotI));
3459566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->YdotRHS));
3469566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->Ydot));
3479566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->VecSolPrev));
3489566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->Y));
3499566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(ts->vec_sol, &ext->Z));
3509566063dSJacob Faibussowitsch   PetscCall(TSGetDM(ts, &dm));
3511baa6e33SBarry Smith   if (dm) PetscCall(DMCoarsenHookAdd(dm, DMCoarsenHook_TSEIMEX, DMRestrictHook_TSEIMEX, ts));
3523ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3537d5697caSHong Zhang }
3547d5697caSHong Zhang 
355d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSSetFromOptions_EIMEX(TS ts, PetscOptionItems *PetscOptionsObject)
356d71ae5a4SJacob Faibussowitsch {
3577d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
3589200755eSBarry Smith   PetscInt  tindex[2];
3597d5697caSHong Zhang   PetscInt  np = 2, nrows = TSEIMEXDefault;
3609200755eSBarry Smith 
3617d5697caSHong Zhang   PetscFunctionBegin;
3629200755eSBarry Smith   tindex[0] = TSEIMEXDefault;
3639200755eSBarry Smith   tindex[1] = TSEIMEXDefault;
364d0609cedSBarry Smith   PetscOptionsHeadBegin(PetscOptionsObject, "EIMEX ODE solver options");
3657d5697caSHong Zhang   {
3667d5697caSHong Zhang     PetscBool flg;
3679566063dSJacob Faibussowitsch     PetscCall(PetscOptionsInt("-ts_eimex_max_rows", "Define the maximum number of rows used", "TSEIMEXSetMaxRows", nrows, &nrows, &flg)); /* default value 3 */
3681baa6e33SBarry Smith     if (flg) PetscCall(TSEIMEXSetMaxRows(ts, nrows));
3699566063dSJacob Faibussowitsch     PetscCall(PetscOptionsIntArray("-ts_eimex_row_col", "Return the specific term in the T table", "TSEIMEXSetRowCol", tindex, &np, &flg));
37048a46eb9SPierre Jolivet     if (flg) PetscCall(TSEIMEXSetRowCol(ts, tindex[0], tindex[1]));
3719566063dSJacob Faibussowitsch     PetscCall(PetscOptionsBool("-ts_eimex_order_adapt", "Solve the problem with adaptive order", "TSEIMEXSetOrdAdapt", ext->ord_adapt, &ext->ord_adapt, NULL));
3727d5697caSHong Zhang   }
373d0609cedSBarry Smith   PetscOptionsHeadEnd();
3743ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3757d5697caSHong Zhang }
3767d5697caSHong Zhang 
377d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSView_EIMEX(TS ts, PetscViewer viewer)
378d71ae5a4SJacob Faibussowitsch {
3797d5697caSHong Zhang   PetscFunctionBegin;
3803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
3817d5697caSHong Zhang }
3827d5697caSHong Zhang 
3837d5697caSHong Zhang /*@C
384bcf0153eSBarry Smith   TSEIMEXSetMaxRows - Set the maximum number of rows for `TSEIMEX` schemes
3857d5697caSHong Zhang 
38620f4b53cSBarry Smith   Logically Collective
3877d5697caSHong Zhang 
388d8d19677SJose E. Roman   Input Parameters:
3897d5697caSHong Zhang + ts    - timestepping context
3907d5697caSHong Zhang - nrows - maximum number of rows
3917d5697caSHong Zhang 
3927d5697caSHong Zhang   Level: intermediate
3937d5697caSHong Zhang 
3941cc06b55SBarry Smith .seealso: [](ch_ts), `TSEIMEXSetRowCol()`, `TSEIMEXSetOrdAdapt()`, `TSEIMEX`
3957d5697caSHong Zhang @*/
396d71ae5a4SJacob Faibussowitsch PetscErrorCode TSEIMEXSetMaxRows(TS ts, PetscInt nrows)
397d71ae5a4SJacob Faibussowitsch {
3987d5697caSHong Zhang   PetscFunctionBegin;
3997d5697caSHong Zhang   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
400cac4c232SBarry Smith   PetscTryMethod(ts, "TSEIMEXSetMaxRows_C", (TS, PetscInt), (ts, nrows));
4013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4027d5697caSHong Zhang }
4037d5697caSHong Zhang 
4047d5697caSHong Zhang /*@C
4052fe279fdSBarry Smith   TSEIMEXSetRowCol - Set the number of rows and the number of columns for the tableau that represents the T solution in the `TSEIMEX` scheme
4067d5697caSHong Zhang 
40720f4b53cSBarry Smith   Logically Collective
4087d5697caSHong Zhang 
409d8d19677SJose E. Roman   Input Parameters:
4107d5697caSHong Zhang + ts  - timestepping context
4112fe279fdSBarry Smith . row - the row
4122fe279fdSBarry Smith - col - the column
4137d5697caSHong Zhang 
4147d5697caSHong Zhang   Level: intermediate
4157d5697caSHong Zhang 
4161cc06b55SBarry Smith .seealso: [](ch_ts), `TSEIMEXSetMaxRows()`, `TSEIMEXSetOrdAdapt()`, `TSEIMEX`
4177d5697caSHong Zhang @*/
418d71ae5a4SJacob Faibussowitsch PetscErrorCode TSEIMEXSetRowCol(TS ts, PetscInt row, PetscInt col)
419d71ae5a4SJacob Faibussowitsch {
4207d5697caSHong Zhang   PetscFunctionBegin;
4217d5697caSHong Zhang   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
422cac4c232SBarry Smith   PetscTryMethod(ts, "TSEIMEXSetRowCol_C", (TS, PetscInt, PetscInt), (ts, row, col));
4233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4247d5697caSHong Zhang }
4257d5697caSHong Zhang 
4267d5697caSHong Zhang /*@C
427bcf0153eSBarry Smith   TSEIMEXSetOrdAdapt - Set the order adaptativity for the `TSEIMEX` schemes
4287d5697caSHong Zhang 
42920f4b53cSBarry Smith   Logically Collective
4307d5697caSHong Zhang 
431d8d19677SJose E. Roman   Input Parameters:
4327d5697caSHong Zhang + ts  - timestepping context
433b43aa488SJacob Faibussowitsch - flg - index in the T table
4347d5697caSHong Zhang 
4357d5697caSHong Zhang   Level: intermediate
4367d5697caSHong Zhang 
43742747ad1SJacob Faibussowitsch .seealso: [](ch_ts), `TSEIMEXSetRowCol()`, `TSEIMEX`
4387d5697caSHong Zhang @*/
439d71ae5a4SJacob Faibussowitsch PetscErrorCode TSEIMEXSetOrdAdapt(TS ts, PetscBool flg)
440d71ae5a4SJacob Faibussowitsch {
4417d5697caSHong Zhang   PetscFunctionBegin;
4427d5697caSHong Zhang   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
443cac4c232SBarry Smith   PetscTryMethod(ts, "TSEIMEXSetOrdAdapt_C", (TS, PetscBool), (ts, flg));
4443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4457d5697caSHong Zhang }
4467d5697caSHong Zhang 
447d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEIMEXSetMaxRows_EIMEX(TS ts, PetscInt nrows)
448d71ae5a4SJacob Faibussowitsch {
4497d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
4507d5697caSHong Zhang   PetscInt  i;
4517d5697caSHong Zhang 
4527d5697caSHong Zhang   PetscFunctionBegin;
45363a3b9bcSJacob Faibussowitsch   PetscCheck(nrows >= 0 && nrows <= 100, ((PetscObject)ts)->comm, PETSC_ERR_ARG_OUTOFRANGE, "Max number of rows (current value %" PetscInt_FMT ") should be an integer number between 1 and 100", nrows);
4549566063dSJacob Faibussowitsch   PetscCall(PetscFree(ext->N));
4557d5697caSHong Zhang   ext->max_rows = nrows;
4569566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(nrows, &ext->N));
4577d5697caSHong Zhang   for (i = 0; i < nrows; i++) ext->N[i] = i + 1;
4583ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4597d5697caSHong Zhang }
4607d5697caSHong Zhang 
461d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEIMEXSetRowCol_EIMEX(TS ts, PetscInt row, PetscInt col)
462d71ae5a4SJacob Faibussowitsch {
4637d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
4647d5697caSHong Zhang 
4657d5697caSHong Zhang   PetscFunctionBegin;
46663a3b9bcSJacob Faibussowitsch   PetscCheck(row >= 1 && col >= 1, ((PetscObject)ts)->comm, PETSC_ERR_ARG_OUTOFRANGE, "The row or column index (current value %" PetscInt_FMT ",%" PetscInt_FMT ") should not be less than 1 ", row, col);
4679371c9d4SSatish Balay   PetscCheck(row <= ext->max_rows && col <= ext->max_rows, ((PetscObject)ts)->comm, PETSC_ERR_ARG_OUTOFRANGE, "The row or column index (current value %" PetscInt_FMT ",%" PetscInt_FMT ") exceeds the maximum number of rows %" PetscInt_FMT, row, col,
4689371c9d4SSatish Balay              ext->max_rows);
46963a3b9bcSJacob Faibussowitsch   PetscCheck(col <= row, ((PetscObject)ts)->comm, PETSC_ERR_ARG_OUTOFRANGE, "The column index (%" PetscInt_FMT ") exceeds the row index (%" PetscInt_FMT ")", col, row);
4707d5697caSHong Zhang 
4717d5697caSHong Zhang   ext->row_ind = row - 1;
4727d5697caSHong Zhang   ext->col_ind = col - 1; /* Array index in C starts from 0 */
4733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4747d5697caSHong Zhang }
4757d5697caSHong Zhang 
476d71ae5a4SJacob Faibussowitsch static PetscErrorCode TSEIMEXSetOrdAdapt_EIMEX(TS ts, PetscBool flg)
477d71ae5a4SJacob Faibussowitsch {
4787d5697caSHong Zhang   TS_EIMEX *ext = (TS_EIMEX *)ts->data;
4797d5697caSHong Zhang   PetscFunctionBegin;
4807d5697caSHong Zhang   ext->ord_adapt = flg;
4813ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4827d5697caSHong Zhang }
4837d5697caSHong Zhang 
4847d5697caSHong Zhang /*MC
485*1d27aa22SBarry Smith    TSEIMEX - Time stepping with Extrapolated IMEX methods {cite}`constantinescu_a2010a`.
486679f3ef1SBarry Smith 
487679f3ef1SBarry Smith    These methods are intended for problems with well-separated time scales, especially when a slow scale is strongly nonlinear such that it
488bcf0153eSBarry Smith    is expensive to solve with a fully implicit method. The user should provide the stiff part of the equation using `TSSetIFunction()` and the
489bcf0153eSBarry Smith    non-stiff part with `TSSetRHSFunction()`.
490bcf0153eSBarry Smith 
491bcf0153eSBarry Smith       Level: beginner
4927d5697caSHong Zhang 
4937d5697caSHong Zhang   Notes:
494bcf0153eSBarry Smith   The default is a 3-stage scheme, it can be changed with `TSEIMEXSetMaxRows()` or -ts_eimex_max_rows
4957d5697caSHong Zhang 
496*1d27aa22SBarry Smith   This method currently only works with ODE, for which the stiff part $ G(t,X,Xdot) $  has the form $ Xdot + Ghat(t,X)$.
4977d5697caSHong Zhang 
498679f3ef1SBarry Smith   The general system is written as
499679f3ef1SBarry Smith 
500*1d27aa22SBarry Smith   $$
501679f3ef1SBarry Smith   G(t,X,Xdot) = F(t,X)
502*1d27aa22SBarry Smith   $$
503679f3ef1SBarry Smith 
504679f3ef1SBarry Smith   where G represents the stiff part and F represents the non-stiff part. The user should provide the stiff part
505bcf0153eSBarry Smith   of the equation using TSSetIFunction() and the non-stiff part with `TSSetRHSFunction()`.
506679f3ef1SBarry Smith   This method is designed to be linearly implicit on G and can use an approximate and lagged Jacobian.
507679f3ef1SBarry Smith 
508679f3ef1SBarry Smith   Another common form for the system is
509679f3ef1SBarry Smith 
510*1d27aa22SBarry Smith   $$
511679f3ef1SBarry Smith   y'=f(x)+g(x)
512*1d27aa22SBarry Smith   $$
513679f3ef1SBarry Smith 
514679f3ef1SBarry Smith   The relationship between F,G and f,g is
515679f3ef1SBarry Smith 
516*1d27aa22SBarry Smith   $$
517679f3ef1SBarry Smith   G = y'-g(x), F = f(x)
518*1d27aa22SBarry Smith   $$
519679f3ef1SBarry Smith 
5201cc06b55SBarry Smith .seealso: [](ch_ts), `TSCreate()`, `TS`, `TSSetType()`, `TSEIMEXSetMaxRows()`, `TSEIMEXSetRowCol()`, `TSEIMEXSetOrdAdapt()`, `TSType`
5217d5697caSHong Zhang  M*/
522d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode TSCreate_EIMEX(TS ts)
523d71ae5a4SJacob Faibussowitsch {
5247d5697caSHong Zhang   TS_EIMEX *ext;
5257d5697caSHong Zhang 
5267d5697caSHong Zhang   PetscFunctionBegin;
5277d5697caSHong Zhang 
5287d5697caSHong Zhang   ts->ops->reset          = TSReset_EIMEX;
5297d5697caSHong Zhang   ts->ops->destroy        = TSDestroy_EIMEX;
5307d5697caSHong Zhang   ts->ops->view           = TSView_EIMEX;
5317d5697caSHong Zhang   ts->ops->setup          = TSSetUp_EIMEX;
5327d5697caSHong Zhang   ts->ops->step           = TSStep_EIMEX;
5337d5697caSHong Zhang   ts->ops->interpolate    = TSInterpolate_EIMEX;
5347d5697caSHong Zhang   ts->ops->evaluatestep   = TSEvaluateStep_EIMEX;
5357d5697caSHong Zhang   ts->ops->setfromoptions = TSSetFromOptions_EIMEX;
5367d5697caSHong Zhang   ts->ops->snesfunction   = SNESTSFormFunction_EIMEX;
5377d5697caSHong Zhang   ts->ops->snesjacobian   = SNESTSFormJacobian_EIMEX;
5382ffb9264SLisandro Dalcin   ts->default_adapt_type  = TSADAPTNONE;
5397d5697caSHong Zhang 
540efd4aadfSBarry Smith   ts->usessnes = PETSC_TRUE;
541efd4aadfSBarry Smith 
5424dfa11a4SJacob Faibussowitsch   PetscCall(PetscNew(&ext));
5437d5697caSHong Zhang   ts->data = (void *)ext;
5447d5697caSHong Zhang 
5457d5697caSHong Zhang   ext->ord_adapt = PETSC_FALSE; /* By default, no order adapativity */
5467d5697caSHong Zhang   ext->row_ind   = -1;
5477d5697caSHong Zhang   ext->col_ind   = -1;
5487d5697caSHong Zhang   ext->max_rows  = TSEIMEXDefault;
5497d5697caSHong Zhang   ext->nstages   = TSEIMEXDefault;
5507d5697caSHong Zhang 
5519566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetMaxRows_C", TSEIMEXSetMaxRows_EIMEX));
5529566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetRowCol_C", TSEIMEXSetRowCol_EIMEX));
5539566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)ts, "TSEIMEXSetOrdAdapt_C", TSEIMEXSetOrdAdapt_EIMEX));
5543ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5557d5697caSHong Zhang }
556