12302aa1bSDebojyoti Ghosh /* 22302aa1bSDebojyoti Ghosh Code for time stepping with the General Linear with Error Estimation method 32302aa1bSDebojyoti Ghosh 4642f3702SEmil Constantinescu 52302aa1bSDebojyoti Ghosh Notes: 62302aa1bSDebojyoti Ghosh The general system is written as 72302aa1bSDebojyoti Ghosh 82302aa1bSDebojyoti Ghosh Udot = F(t,U) 92302aa1bSDebojyoti Ghosh 102302aa1bSDebojyoti Ghosh */ 112302aa1bSDebojyoti Ghosh #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 122302aa1bSDebojyoti Ghosh #include <petscdm.h> 132302aa1bSDebojyoti Ghosh 14642f3702SEmil Constantinescu static PetscBool cited = PETSC_FALSE; 15642f3702SEmil Constantinescu static const char citation[] = 16642f3702SEmil Constantinescu "@ARTICLE{Constantinescu_TR2016b,\n" 17642f3702SEmil Constantinescu " author = {Constantinescu, E.M.},\n" 18642f3702SEmil Constantinescu " title = {Estimating Global Errors in Time Stepping},\n" 19642f3702SEmil Constantinescu " journal = {ArXiv e-prints},\n" 20642f3702SEmil Constantinescu " year = 2016,\n" 21642f3702SEmil Constantinescu " adsurl = {http://adsabs.harvard.edu/abs/2015arXiv150305166C}\n}\n"; 22642f3702SEmil Constantinescu 232302aa1bSDebojyoti Ghosh static TSGLEEType TSGLEEDefaultType = TSGLEE35; 242302aa1bSDebojyoti Ghosh static PetscBool TSGLEERegisterAllCalled; 252302aa1bSDebojyoti Ghosh static PetscBool TSGLEEPackageInitialized; 262302aa1bSDebojyoti Ghosh static PetscInt explicit_stage_time_id; 272302aa1bSDebojyoti Ghosh 282302aa1bSDebojyoti Ghosh typedef struct _GLEETableau *GLEETableau; 292302aa1bSDebojyoti Ghosh struct _GLEETableau { 302302aa1bSDebojyoti Ghosh char *name; 312302aa1bSDebojyoti Ghosh PetscInt order; /* Classical approximation order of the method i*/ 322302aa1bSDebojyoti Ghosh PetscInt s; /* Number of stages */ 332302aa1bSDebojyoti Ghosh PetscInt r; /* Number of steps */ 342302aa1bSDebojyoti Ghosh PetscReal gamma; /* LTE ratio */ 352302aa1bSDebojyoti Ghosh PetscReal *A,*B,*U,*V,*S,*F,*c; /* Tableau */ 362302aa1bSDebojyoti Ghosh PetscReal *Fembed; /* Embedded final method coefficients */ 37fd96ebc2SDebojyoti Ghosh PetscReal *Ferror; /* Coefficients for computing error */ 3857df6a1bSDebojyoti Ghosh PetscReal *Serror; /* Coefficients for initializing the error */ 392302aa1bSDebojyoti Ghosh PetscInt pinterp; /* Interpolation order */ 402302aa1bSDebojyoti Ghosh PetscReal *binterp; /* Interpolation coefficients */ 412302aa1bSDebojyoti Ghosh PetscReal ccfl; /* Placeholder for CFL coefficient relative to forward Euler */ 422302aa1bSDebojyoti Ghosh }; 432302aa1bSDebojyoti Ghosh typedef struct _GLEETableauLink *GLEETableauLink; 442302aa1bSDebojyoti Ghosh struct _GLEETableauLink { 452302aa1bSDebojyoti Ghosh struct _GLEETableau tab; 462302aa1bSDebojyoti Ghosh GLEETableauLink next; 472302aa1bSDebojyoti Ghosh }; 482302aa1bSDebojyoti Ghosh static GLEETableauLink GLEETableauList; 492302aa1bSDebojyoti Ghosh 502302aa1bSDebojyoti Ghosh typedef struct { 512302aa1bSDebojyoti Ghosh GLEETableau tableau; 522302aa1bSDebojyoti Ghosh Vec *Y; /* Solution vector (along with auxiliary solution y~ or eps) */ 532302aa1bSDebojyoti Ghosh Vec *X; /* Temporary solution vector */ 542302aa1bSDebojyoti Ghosh Vec *YStage; /* Stage values */ 552302aa1bSDebojyoti Ghosh Vec *YdotStage; /* Stage right hand side */ 562302aa1bSDebojyoti Ghosh Vec W; /* Right-hand-side for implicit stage solve */ 572302aa1bSDebojyoti Ghosh Vec Ydot; /* Work vector holding Ydot during residual evaluation */ 580a01e1b2SEmil Constantinescu Vec yGErr; /* Vector holding the global error after a step is completed */ 59ec0e3ee2SEmil Constantinescu PetscScalar *swork; /* Scalar work (size of the number of stages)*/ 60ec0e3ee2SEmil Constantinescu PetscScalar *rwork; /* Scalar work (size of the number of steps)*/ 612302aa1bSDebojyoti Ghosh PetscReal scoeff; /* shift = scoeff/dt */ 622302aa1bSDebojyoti Ghosh PetscReal stage_time; 632302aa1bSDebojyoti Ghosh TSStepStatus status; 642302aa1bSDebojyoti Ghosh } TS_GLEE; 652302aa1bSDebojyoti Ghosh 662302aa1bSDebojyoti Ghosh /*MC 672302aa1bSDebojyoti Ghosh TSGLEE23 - Second order three stage GLEE method 682302aa1bSDebojyoti Ghosh 692302aa1bSDebojyoti Ghosh This method has three stages. 702302aa1bSDebojyoti Ghosh s = 3, r = 2 712302aa1bSDebojyoti Ghosh 722302aa1bSDebojyoti Ghosh Level: advanced 732302aa1bSDebojyoti Ghosh 742302aa1bSDebojyoti Ghosh .seealso: TSGLEE 7536c34d14SEmil Constantinescu M*/ 762302aa1bSDebojyoti Ghosh /*MC 772302aa1bSDebojyoti Ghosh TSGLEE24 - Second order four stage GLEE method 782302aa1bSDebojyoti Ghosh 792302aa1bSDebojyoti Ghosh This method has four stages. 802302aa1bSDebojyoti Ghosh s = 4, r = 2 812302aa1bSDebojyoti Ghosh 822302aa1bSDebojyoti Ghosh Level: advanced 832302aa1bSDebojyoti Ghosh 842302aa1bSDebojyoti Ghosh .seealso: TSGLEE 8536c34d14SEmil Constantinescu M*/ 862302aa1bSDebojyoti Ghosh /*MC 872302aa1bSDebojyoti Ghosh TSGLEE25i - Second order five stage GLEE method 882302aa1bSDebojyoti Ghosh 892302aa1bSDebojyoti Ghosh This method has five stages. 902302aa1bSDebojyoti Ghosh s = 5, r = 2 912302aa1bSDebojyoti Ghosh 922302aa1bSDebojyoti Ghosh Level: advanced 932302aa1bSDebojyoti Ghosh 942302aa1bSDebojyoti Ghosh .seealso: TSGLEE 9536c34d14SEmil Constantinescu M*/ 962302aa1bSDebojyoti Ghosh /*MC 972302aa1bSDebojyoti Ghosh TSGLEE35 - Third order five stage GLEE method 982302aa1bSDebojyoti Ghosh 992302aa1bSDebojyoti Ghosh This method has five stages. 1002302aa1bSDebojyoti Ghosh s = 5, r = 2 1012302aa1bSDebojyoti Ghosh 1022302aa1bSDebojyoti Ghosh Level: advanced 1032302aa1bSDebojyoti Ghosh 1042302aa1bSDebojyoti Ghosh .seealso: TSGLEE 10536c34d14SEmil Constantinescu M*/ 1062302aa1bSDebojyoti Ghosh /*MC 1072302aa1bSDebojyoti Ghosh TSGLEEEXRK2A - Second order six stage GLEE method 1082302aa1bSDebojyoti Ghosh 1092302aa1bSDebojyoti Ghosh This method has six stages. 1102302aa1bSDebojyoti Ghosh s = 6, r = 2 1112302aa1bSDebojyoti Ghosh 1122302aa1bSDebojyoti Ghosh Level: advanced 1132302aa1bSDebojyoti Ghosh 1142302aa1bSDebojyoti Ghosh .seealso: TSGLEE 11536c34d14SEmil Constantinescu M*/ 1162302aa1bSDebojyoti Ghosh /*MC 1172302aa1bSDebojyoti Ghosh TSGLEERK32G1 - Third order eight stage GLEE method 1182302aa1bSDebojyoti Ghosh 1192302aa1bSDebojyoti Ghosh This method has eight stages. 1202302aa1bSDebojyoti Ghosh s = 8, r = 2 1212302aa1bSDebojyoti Ghosh 1222302aa1bSDebojyoti Ghosh Level: advanced 1232302aa1bSDebojyoti Ghosh 1242302aa1bSDebojyoti Ghosh .seealso: TSGLEE 12536c34d14SEmil Constantinescu M*/ 1262302aa1bSDebojyoti Ghosh /*MC 1272302aa1bSDebojyoti Ghosh TSGLEERK285EX - Second order nine stage GLEE method 1282302aa1bSDebojyoti Ghosh 1292302aa1bSDebojyoti Ghosh This method has nine stages. 1302302aa1bSDebojyoti Ghosh s = 9, r = 2 1312302aa1bSDebojyoti Ghosh 1322302aa1bSDebojyoti Ghosh Level: advanced 1332302aa1bSDebojyoti Ghosh 1342302aa1bSDebojyoti Ghosh .seealso: TSGLEE 13536c34d14SEmil Constantinescu M*/ 1362302aa1bSDebojyoti Ghosh 1372302aa1bSDebojyoti Ghosh /*@C 1382302aa1bSDebojyoti Ghosh TSGLEERegisterAll - Registers all of the General Linear with Error Estimation methods in TSGLEE 1392302aa1bSDebojyoti Ghosh 1402302aa1bSDebojyoti Ghosh Not Collective, but should be called by all processes which will need the schemes to be registered 1412302aa1bSDebojyoti Ghosh 1422302aa1bSDebojyoti Ghosh Level: advanced 1432302aa1bSDebojyoti Ghosh 1442302aa1bSDebojyoti Ghosh .keywords: TS, TSGLEE, register, all 1452302aa1bSDebojyoti Ghosh 1462302aa1bSDebojyoti Ghosh .seealso: TSGLEERegisterDestroy() 1472302aa1bSDebojyoti Ghosh @*/ 1482302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEERegisterAll(void) 1492302aa1bSDebojyoti Ghosh { 1502302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 1512302aa1bSDebojyoti Ghosh 1522302aa1bSDebojyoti Ghosh PetscFunctionBegin; 1532302aa1bSDebojyoti Ghosh if (TSGLEERegisterAllCalled) PetscFunctionReturn(0); 1542302aa1bSDebojyoti Ghosh TSGLEERegisterAllCalled = PETSC_TRUE; 1552302aa1bSDebojyoti Ghosh 1562302aa1bSDebojyoti Ghosh { 157b1fbfd33SSatish Balay #define GAMMA 0.5 1582302aa1bSDebojyoti Ghosh /* y-eps form */ 1592302aa1bSDebojyoti Ghosh const PetscInt 160ab8c5912SEmil Constantinescu p = 1, 161ab8c5912SEmil Constantinescu s = 3, 162ab8c5912SEmil Constantinescu r = 2; 163ab8c5912SEmil Constantinescu const PetscReal 164ab8c5912SEmil Constantinescu A[3][3] = {{1.0,0,0},{0,0.5,0},{0,0.5,0.5}}, 165ab8c5912SEmil Constantinescu B[2][3] = {{1.0,0,0},{-2.0,1.0,1.0}}, 166ab8c5912SEmil Constantinescu U[3][2] = {{1.0,0},{1.0,0.5},{1.0,0.5}}, 167ab8c5912SEmil Constantinescu V[2][2] = {{1,0},{0,1}}, 168ab8c5912SEmil Constantinescu S[2] = {1,0}, 169ab8c5912SEmil Constantinescu F[2] = {1,0}, 170b1fbfd33SSatish Balay Fembed[2] = {1,1-GAMMA}, 17157df6a1bSDebojyoti Ghosh Ferror[2] = {0,1}, 17257df6a1bSDebojyoti Ghosh Serror[2] = {1,0}; 173b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEEi1,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 174ab8c5912SEmil Constantinescu } 175ab8c5912SEmil Constantinescu { 176b1fbfd33SSatish Balay #undef GAMMA 177b1fbfd33SSatish Balay #define GAMMA 0.0 178ab8c5912SEmil Constantinescu /* y-eps form */ 179ab8c5912SEmil Constantinescu const PetscInt 1802302aa1bSDebojyoti Ghosh p = 2, 1812302aa1bSDebojyoti Ghosh s = 3, 1822302aa1bSDebojyoti Ghosh r = 2; 1832302aa1bSDebojyoti Ghosh const PetscReal 1842302aa1bSDebojyoti Ghosh A[3][3] = {{0,0,0},{1,0,0},{0.25,0.25,0}}, 1852302aa1bSDebojyoti Ghosh B[2][3] = {{1.0/12.0,1.0/12.0,5.0/6.0},{1.0/12.0,1.0/12.0,-1.0/6.0}}, 1862302aa1bSDebojyoti Ghosh U[3][2] = {{1,0},{1,10},{1,-1}}, 1872302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 1882302aa1bSDebojyoti Ghosh S[2] = {1,0}, 1892302aa1bSDebojyoti Ghosh F[2] = {1,0}, 190b1fbfd33SSatish Balay Fembed[2] = {1,1-GAMMA}, 19157df6a1bSDebojyoti Ghosh Ferror[2] = {0,1}, 19257df6a1bSDebojyoti Ghosh Serror[2] = {1,0}; 193b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEE23,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 1942302aa1bSDebojyoti Ghosh } 1952302aa1bSDebojyoti Ghosh { 196b1fbfd33SSatish Balay #undef GAMMA 197b1fbfd33SSatish Balay #define GAMMA 0.0 1982302aa1bSDebojyoti Ghosh /* y-y~ form */ 1992302aa1bSDebojyoti Ghosh const PetscInt 2002302aa1bSDebojyoti Ghosh p = 2, 2012302aa1bSDebojyoti Ghosh s = 4, 2022302aa1bSDebojyoti Ghosh r = 2; 2032302aa1bSDebojyoti Ghosh const PetscReal 2042302aa1bSDebojyoti Ghosh A[4][4] = {{0,0,0,0},{0.75,0,0,0},{0.25,29.0/60.0,0,0},{-21.0/44.0,145.0/44.0,-20.0/11.0,0}}, 2052302aa1bSDebojyoti Ghosh B[2][4] = {{109.0/275.0,58.0/75.0,-37.0/110.0,1.0/6.0},{3.0/11.0,0,75.0/88.0,-1.0/8.0}}, 2062302aa1bSDebojyoti Ghosh U[4][2] = {{0,1},{75.0/58.0,-17.0/58.0},{0,1},{0,1}}, 2072302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 2082302aa1bSDebojyoti Ghosh S[2] = {1,1}, 2092302aa1bSDebojyoti Ghosh F[2] = {1,0}, 210fd96ebc2SDebojyoti Ghosh Fembed[2] = {0,1}, 211b1fbfd33SSatish Balay Ferror[2] = {-1.0/(1.0-GAMMA),1.0/(1.0-GAMMA)}, 212b1fbfd33SSatish Balay Serror[2] = {1.0-GAMMA,1.0}; 213b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEE24,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 2142302aa1bSDebojyoti Ghosh } 2152302aa1bSDebojyoti Ghosh { 216b1fbfd33SSatish Balay #undef GAMMA 217b1fbfd33SSatish Balay #define GAMMA 0.0 2182302aa1bSDebojyoti Ghosh /* y-y~ form */ 2192302aa1bSDebojyoti Ghosh const PetscInt 2202302aa1bSDebojyoti Ghosh p = 2, 2212302aa1bSDebojyoti Ghosh s = 5, 2222302aa1bSDebojyoti Ghosh r = 2; 2232302aa1bSDebojyoti Ghosh const PetscReal 2242302aa1bSDebojyoti Ghosh A[5][5] = {{0,0,0,0,0}, 2252302aa1bSDebojyoti Ghosh {-0.94079244066783383269,0,0,0,0}, 2262302aa1bSDebojyoti Ghosh {0.64228187778301907108,0.10915356933958500042,0,0,0}, 2272302aa1bSDebojyoti Ghosh {-0.51764297742287450812,0.74414270351096040738,-0.71404164927824538121,0,0}, 2282302aa1bSDebojyoti Ghosh {-0.44696561556825969206,-0.76768425657590196518,0.20111608138142987881,0.93828186737840469796,0}}, 2292302aa1bSDebojyoti Ghosh B[2][5] = {{-0.029309178948150356153,-0.49671981884013874923,0.34275801517650053274,0.32941112623949194988,0.85385985637229662276}, 2302302aa1bSDebojyoti Ghosh {0.78133219686062535272,0.074238691892675897635,0.57957363498384957966,-0.24638502829674959968,-0.18875949544040123033}}, 2312302aa1bSDebojyoti Ghosh U[5][2] = {{0.16911424754448327735,0.83088575245551672265}, 2322302aa1bSDebojyoti Ghosh {0.53638465733199574340,0.46361534266800425660}, 2332302aa1bSDebojyoti Ghosh {0.39901579167169582526,0.60098420832830417474}, 2342302aa1bSDebojyoti Ghosh {0.87689005530618575480,0.12310994469381424520}, 2352302aa1bSDebojyoti Ghosh {0.99056100455550913009,0.0094389954444908699092}}, 2362302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 2372302aa1bSDebojyoti Ghosh S[2] = {1,1}, 2382302aa1bSDebojyoti Ghosh F[2] = {1,0}, 239fd96ebc2SDebojyoti Ghosh Fembed[2] = {0,1}, 240b1fbfd33SSatish Balay Ferror[2] = {-1.0/(1.0-GAMMA),1.0/(1.0-GAMMA)}, 241b1fbfd33SSatish Balay Serror[2] = {1.0-GAMMA,1.0}; 242b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEE25I,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 2432302aa1bSDebojyoti Ghosh } 2442302aa1bSDebojyoti Ghosh { 245b1fbfd33SSatish Balay #undef GAMMA 246b1fbfd33SSatish Balay #define GAMMA 0.0 2472302aa1bSDebojyoti Ghosh /* y-y~ form */ 2482302aa1bSDebojyoti Ghosh const PetscInt 2492302aa1bSDebojyoti Ghosh p = 3, 2502302aa1bSDebojyoti Ghosh s = 5, 2512302aa1bSDebojyoti Ghosh r = 2; 2522302aa1bSDebojyoti Ghosh const PetscReal 2532302aa1bSDebojyoti Ghosh A[5][5] = {{0,0,0,0,0}, 2542302aa1bSDebojyoti Ghosh {- 2169604947363702313.0 / 24313474998937147335.0,0,0,0,0}, 2552302aa1bSDebojyoti Ghosh {46526746497697123895.0 / 94116917485856474137.0,-10297879244026594958.0 / 49199457603717988219.0,0,0,0}, 2562302aa1bSDebojyoti Ghosh {23364788935845982499.0 / 87425311444725389446.0,-79205144337496116638.0 / 148994349441340815519.0,40051189859317443782.0 / 36487615018004984309.0,0,0}, 25717d8b14cSSatish Balay {42089522664062539205.0 / 124911313006412840286.0,-15074384760342762939.0 / 137927286865289746282.0,-62274678522253371016.0 / 125918573676298591413.0,13755475729852471739.0 / 79257927066651693390.0,0}}, 2582302aa1bSDebojyoti Ghosh B[2][5] = {{61546696837458703723.0 / 56982519523786160813.0,-55810892792806293355.0 / 206957624151308356511.0,24061048952676379087.0 / 158739347956038723465.0,3577972206874351339.0 / 7599733370677197135.0,-59449832954780563947.0 / 137360038685338563670.0}, 2592302aa1bSDebojyoti Ghosh {- 9738262186984159168.0 / 99299082461487742983.0,-32797097931948613195.0 / 61521565616362163366.0,42895514606418420631.0 / 71714201188501437336.0,22608567633166065068.0 / 55371917805607957003.0,94655809487476459565.0 / 151517167160302729021.0}}, 2602302aa1bSDebojyoti Ghosh U[5][2] = {{70820309139834661559.0 / 80863923579509469826.0,10043614439674808267.0 / 80863923579509469826.0}, 2612302aa1bSDebojyoti Ghosh {161694774978034105510.0 / 106187653640211060371.0,-55507121337823045139.0 / 106187653640211060371.0}, 2622302aa1bSDebojyoti Ghosh {78486094644566264568.0 / 88171030896733822981.0,9684936252167558413.0 / 88171030896733822981.0}, 2632302aa1bSDebojyoti Ghosh {65394922146334854435.0 / 84570853840405479554.0,19175931694070625119.0 / 84570853840405479554.0}, 2642302aa1bSDebojyoti Ghosh {8607282770183754108.0 / 108658046436496925911.0,100050763666313171803.0 / 108658046436496925911.0}}, 2652302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 2662302aa1bSDebojyoti Ghosh S[2] = {1,1}, 2672302aa1bSDebojyoti Ghosh F[2] = {1,0}, 268fd96ebc2SDebojyoti Ghosh Fembed[2] = {0,1}, 269b1fbfd33SSatish Balay Ferror[2] = {-1.0/(1.0-GAMMA),1.0/(1.0-GAMMA)}, 270b1fbfd33SSatish Balay Serror[2] = {1.0-GAMMA,1.0}; 271b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEE35,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 2722302aa1bSDebojyoti Ghosh } 2732302aa1bSDebojyoti Ghosh { 274b1fbfd33SSatish Balay #undef GAMMA 275b1fbfd33SSatish Balay #define GAMMA 0.25 2762302aa1bSDebojyoti Ghosh /* y-eps form */ 2772302aa1bSDebojyoti Ghosh const PetscInt 2782302aa1bSDebojyoti Ghosh p = 2, 2792302aa1bSDebojyoti Ghosh s = 6, 2802302aa1bSDebojyoti Ghosh r = 2; 2812302aa1bSDebojyoti Ghosh const PetscReal 2822302aa1bSDebojyoti Ghosh A[6][6] = {{0,0,0,0,0,0}, 2832302aa1bSDebojyoti Ghosh {1,0,0,0,0,0}, 2842302aa1bSDebojyoti Ghosh {0,0,0,0,0,0}, 2852302aa1bSDebojyoti Ghosh {0,0,0.5,0,0,0}, 2862302aa1bSDebojyoti Ghosh {0,0,0.25,0.25,0,0}, 2872302aa1bSDebojyoti Ghosh {0,0,0.25,0.25,0.5,0}}, 2882302aa1bSDebojyoti Ghosh B[2][6] = {{0.5,0.5,0,0,0,0}, 2892302aa1bSDebojyoti Ghosh {-2.0/3.0,-2.0/3.0,1.0/3.0,1.0/3.0,1.0/3.0,1.0/3.0}}, 2902302aa1bSDebojyoti Ghosh U[6][2] = {{1,0},{1,0},{1,0.75},{1,0.75},{1,0.75},{1,0.75}}, 2912302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 2922302aa1bSDebojyoti Ghosh S[2] = {1,0}, 2932302aa1bSDebojyoti Ghosh F[2] = {1,0}, 294b1fbfd33SSatish Balay Fembed[2] = {1,1-GAMMA}, 29557df6a1bSDebojyoti Ghosh Ferror[2] = {0,1}, 29657df6a1bSDebojyoti Ghosh Serror[2] = {1,0}; 297b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEEEXRK2A,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 2982302aa1bSDebojyoti Ghosh } 2992302aa1bSDebojyoti Ghosh { 300b1fbfd33SSatish Balay #undef GAMMA 301b1fbfd33SSatish Balay #define GAMMA 0.0 3022302aa1bSDebojyoti Ghosh /* y-eps form */ 3032302aa1bSDebojyoti Ghosh const PetscInt 3042302aa1bSDebojyoti Ghosh p = 3, 3052302aa1bSDebojyoti Ghosh s = 8, 3062302aa1bSDebojyoti Ghosh r = 2; 3072302aa1bSDebojyoti Ghosh const PetscReal 3082302aa1bSDebojyoti Ghosh A[8][8] = {{0,0,0,0,0,0,0,0}, 3092302aa1bSDebojyoti Ghosh {0.5,0,0,0,0,0,0,0}, 3102302aa1bSDebojyoti Ghosh {-1,2,0,0,0,0,0,0}, 3112302aa1bSDebojyoti Ghosh {1.0/6.0,2.0/3.0,1.0/6.0,0,0,0,0,0}, 3122302aa1bSDebojyoti Ghosh {0,0,0,0,0,0,0,0}, 3132302aa1bSDebojyoti Ghosh {-7.0/24.0,1.0/3.0,1.0/12.0,-1.0/8.0,0.5,0,0,0}, 3142302aa1bSDebojyoti Ghosh {7.0/6.0,-4.0/3.0,-1.0/3.0,0.5,-1.0,2.0,0,0}, 3152302aa1bSDebojyoti Ghosh {0,0,0,0,1.0/6.0,2.0/3.0,1.0/6.0,0}}, 3162302aa1bSDebojyoti Ghosh B[2][8] = {{1.0/6.0,2.0/3.0,1.0/6.0,0,0,0,0,0}, 3172302aa1bSDebojyoti Ghosh {-1.0/6.0,-2.0/3.0,-1.0/6.0,0,1.0/6.0,2.0/3.0,1.0/6.0,0}}, 3182302aa1bSDebojyoti Ghosh U[8][2] = {{1,0},{1,0},{1,0},{1,0},{1,1},{1,1},{1,1},{1,1}}, 3192302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 3202302aa1bSDebojyoti Ghosh S[2] = {1,0}, 3212302aa1bSDebojyoti Ghosh F[2] = {1,0}, 322b1fbfd33SSatish Balay Fembed[2] = {1,1-GAMMA}, 32357df6a1bSDebojyoti Ghosh Ferror[2] = {0,1}, 32457df6a1bSDebojyoti Ghosh Serror[2] = {1,0}; 325b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEERK32G1,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 3262302aa1bSDebojyoti Ghosh } 3272302aa1bSDebojyoti Ghosh { 328b1fbfd33SSatish Balay #undef GAMMA 329b1fbfd33SSatish Balay #define GAMMA 0.25 3302302aa1bSDebojyoti Ghosh /* y-eps form */ 3312302aa1bSDebojyoti Ghosh const PetscInt 3322302aa1bSDebojyoti Ghosh p = 2, 3332302aa1bSDebojyoti Ghosh s = 9, 3342302aa1bSDebojyoti Ghosh r = 2; 3352302aa1bSDebojyoti Ghosh const PetscReal 3362302aa1bSDebojyoti Ghosh A[9][9] = {{0,0,0,0,0,0,0,0,0}, 3372302aa1bSDebojyoti Ghosh {0.585786437626904966,0,0,0,0,0,0,0,0}, 3382302aa1bSDebojyoti Ghosh {0.149999999999999994,0.849999999999999978,0,0,0,0,0,0,0}, 3392302aa1bSDebojyoti Ghosh {0,0,0,0,0,0,0,0,0}, 3402302aa1bSDebojyoti Ghosh {0,0,0,0.292893218813452483,0,0,0,0,0}, 3412302aa1bSDebojyoti Ghosh {0,0,0,0.0749999999999999972,0.424999999999999989,0,0,0,0}, 3422302aa1bSDebojyoti Ghosh {0,0,0,0.176776695296636893,0.176776695296636893,0.146446609406726241,0,0,0}, 3432302aa1bSDebojyoti Ghosh {0,0,0,0.176776695296636893,0.176776695296636893,0.146446609406726241,0.292893218813452483,0,0}, 3442302aa1bSDebojyoti Ghosh {0,0,0,0.176776695296636893,0.176776695296636893,0.146446609406726241,0.0749999999999999972,0.424999999999999989,0}}, 3452302aa1bSDebojyoti Ghosh B[2][9] = {{0.353553390593273786,0.353553390593273786,0.292893218813452483,0,0,0,0,0,0}, 3462302aa1bSDebojyoti Ghosh {-0.471404520791031678,-0.471404520791031678,-0.390524291751269959,0.235702260395515839,0.235702260395515839,0.195262145875634979,0.235702260395515839,0.235702260395515839,0.195262145875634979}}, 3472302aa1bSDebojyoti Ghosh U[9][2] = {{1,0},{1,0},{1,0},{1,0.75},{1,0.75},{1,0.75},{1,0.75},{1,0.75},{1,0.75}}, 3482302aa1bSDebojyoti Ghosh V[2][2] = {{1,0},{0,1}}, 3492302aa1bSDebojyoti Ghosh S[2] = {1,0}, 3502302aa1bSDebojyoti Ghosh F[2] = {1,0}, 351b1fbfd33SSatish Balay Fembed[2] = {1,1-GAMMA}, 35257df6a1bSDebojyoti Ghosh Ferror[2] = {0,1}, 35357df6a1bSDebojyoti Ghosh Serror[2] = {1,0}; 354b1fbfd33SSatish Balay ierr = TSGLEERegister(TSGLEERK285EX,p,s,r,GAMMA,&A[0][0],&B[0][0],&U[0][0],&V[0][0],S,F,NULL,Fembed,Ferror,Serror,0,NULL);CHKERRQ(ierr); 3552302aa1bSDebojyoti Ghosh } 3562302aa1bSDebojyoti Ghosh 3572302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 3582302aa1bSDebojyoti Ghosh } 3592302aa1bSDebojyoti Ghosh 3602302aa1bSDebojyoti Ghosh /*@C 3612302aa1bSDebojyoti Ghosh TSGLEERegisterDestroy - Frees the list of schemes that were registered by TSGLEERegister(). 3622302aa1bSDebojyoti Ghosh 3632302aa1bSDebojyoti Ghosh Not Collective 3642302aa1bSDebojyoti Ghosh 3652302aa1bSDebojyoti Ghosh Level: advanced 3662302aa1bSDebojyoti Ghosh 3672302aa1bSDebojyoti Ghosh .keywords: TSGLEE, register, destroy 3682302aa1bSDebojyoti Ghosh .seealso: TSGLEERegister(), TSGLEERegisterAll() 3692302aa1bSDebojyoti Ghosh @*/ 3702302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEERegisterDestroy(void) 3712302aa1bSDebojyoti Ghosh { 3722302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 3732302aa1bSDebojyoti Ghosh GLEETableauLink link; 3742302aa1bSDebojyoti Ghosh 3752302aa1bSDebojyoti Ghosh PetscFunctionBegin; 3762302aa1bSDebojyoti Ghosh while ((link = GLEETableauList)) { 3772302aa1bSDebojyoti Ghosh GLEETableau t = &link->tab; 3782302aa1bSDebojyoti Ghosh GLEETableauList = link->next; 3792302aa1bSDebojyoti Ghosh ierr = PetscFree5(t->A,t->B,t->U,t->V,t->c); CHKERRQ(ierr); 3802302aa1bSDebojyoti Ghosh ierr = PetscFree2(t->S,t->F); CHKERRQ(ierr); 3812302aa1bSDebojyoti Ghosh ierr = PetscFree (t->Fembed); CHKERRQ(ierr); 382fd96ebc2SDebojyoti Ghosh ierr = PetscFree (t->Ferror); CHKERRQ(ierr); 38357df6a1bSDebojyoti Ghosh ierr = PetscFree (t->Serror); CHKERRQ(ierr); 3842302aa1bSDebojyoti Ghosh ierr = PetscFree (t->binterp); CHKERRQ(ierr); 3852302aa1bSDebojyoti Ghosh ierr = PetscFree (t->name); CHKERRQ(ierr); 3862302aa1bSDebojyoti Ghosh ierr = PetscFree (link); CHKERRQ(ierr); 3872302aa1bSDebojyoti Ghosh } 3882302aa1bSDebojyoti Ghosh TSGLEERegisterAllCalled = PETSC_FALSE; 3892302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 3902302aa1bSDebojyoti Ghosh } 3912302aa1bSDebojyoti Ghosh 3922302aa1bSDebojyoti Ghosh /*@C 3932302aa1bSDebojyoti Ghosh TSGLEEInitializePackage - This function initializes everything in the TSGLEE package. It is called 3942302aa1bSDebojyoti Ghosh from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_GLEE() 3952302aa1bSDebojyoti Ghosh when using static libraries. 3962302aa1bSDebojyoti Ghosh 3972302aa1bSDebojyoti Ghosh Level: developer 3982302aa1bSDebojyoti Ghosh 3992302aa1bSDebojyoti Ghosh .keywords: TS, TSGLEE, initialize, package 4002302aa1bSDebojyoti Ghosh .seealso: PetscInitialize() 4012302aa1bSDebojyoti Ghosh @*/ 4022302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEEInitializePackage(void) 4032302aa1bSDebojyoti Ghosh { 4042302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 4052302aa1bSDebojyoti Ghosh 4062302aa1bSDebojyoti Ghosh PetscFunctionBegin; 4072302aa1bSDebojyoti Ghosh if (TSGLEEPackageInitialized) PetscFunctionReturn(0); 4082302aa1bSDebojyoti Ghosh TSGLEEPackageInitialized = PETSC_TRUE; 4092302aa1bSDebojyoti Ghosh ierr = TSGLEERegisterAll();CHKERRQ(ierr); 4102302aa1bSDebojyoti Ghosh ierr = PetscObjectComposedDataRegister(&explicit_stage_time_id);CHKERRQ(ierr); 4112302aa1bSDebojyoti Ghosh ierr = PetscRegisterFinalize(TSGLEEFinalizePackage);CHKERRQ(ierr); 4122302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 4132302aa1bSDebojyoti Ghosh } 4142302aa1bSDebojyoti Ghosh 4152302aa1bSDebojyoti Ghosh /*@C 4162302aa1bSDebojyoti Ghosh TSGLEEFinalizePackage - This function destroys everything in the TSGLEE package. It is 4172302aa1bSDebojyoti Ghosh called from PetscFinalize(). 4182302aa1bSDebojyoti Ghosh 4192302aa1bSDebojyoti Ghosh Level: developer 4202302aa1bSDebojyoti Ghosh 4212302aa1bSDebojyoti Ghosh .keywords: Petsc, destroy, package 4222302aa1bSDebojyoti Ghosh .seealso: PetscFinalize() 4232302aa1bSDebojyoti Ghosh @*/ 4242302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEEFinalizePackage(void) 4252302aa1bSDebojyoti Ghosh { 4262302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 4272302aa1bSDebojyoti Ghosh 4282302aa1bSDebojyoti Ghosh PetscFunctionBegin; 4292302aa1bSDebojyoti Ghosh TSGLEEPackageInitialized = PETSC_FALSE; 4302302aa1bSDebojyoti Ghosh ierr = TSGLEERegisterDestroy();CHKERRQ(ierr); 4312302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 4322302aa1bSDebojyoti Ghosh } 4332302aa1bSDebojyoti Ghosh 4342302aa1bSDebojyoti Ghosh /*@C 4352302aa1bSDebojyoti Ghosh TSGLEERegister - register an GLEE scheme by providing the entries in the Butcher tableau 4362302aa1bSDebojyoti Ghosh 4372302aa1bSDebojyoti Ghosh Not Collective, but the same schemes should be registered on all processes on which they will be used 4382302aa1bSDebojyoti Ghosh 4392302aa1bSDebojyoti Ghosh Input Parameters: 4402302aa1bSDebojyoti Ghosh + name - identifier for method 4412302aa1bSDebojyoti Ghosh . order - order of method 4422302aa1bSDebojyoti Ghosh . s - number of stages 4432302aa1bSDebojyoti Ghosh . r - number of steps 4442302aa1bSDebojyoti Ghosh . gamma - LTE ratio 4452302aa1bSDebojyoti Ghosh . A - stage coefficients (dimension s*s, row-major) 4462302aa1bSDebojyoti Ghosh . B - step completion coefficients (dimension r*s, row-major) 4472302aa1bSDebojyoti Ghosh . U - method coefficients (dimension s*r, row-major) 4482302aa1bSDebojyoti Ghosh . V - method coefficients (dimension r*r, row-major) 4492302aa1bSDebojyoti Ghosh . S - starting coefficients 4502302aa1bSDebojyoti Ghosh . F - finishing coefficients 4512302aa1bSDebojyoti Ghosh . c - abscissa (dimension s; NULL to use row sums of A) 4522302aa1bSDebojyoti Ghosh . Fembed - step completion coefficients for embedded method 453fd96ebc2SDebojyoti Ghosh . Ferror - error computation coefficients 45457df6a1bSDebojyoti Ghosh . Serror - error initialization coefficients 4552302aa1bSDebojyoti Ghosh . pinterp - order of interpolation (0 if unavailable) 4562302aa1bSDebojyoti Ghosh - binterp - array of interpolation coefficients (NULL if unavailable) 4572302aa1bSDebojyoti Ghosh 4582302aa1bSDebojyoti Ghosh Notes: 4592302aa1bSDebojyoti Ghosh Several GLEE methods are provided, this function is only needed to create new methods. 4602302aa1bSDebojyoti Ghosh 4612302aa1bSDebojyoti Ghosh Level: advanced 4622302aa1bSDebojyoti Ghosh 4632302aa1bSDebojyoti Ghosh .keywords: TS, register 4642302aa1bSDebojyoti Ghosh 4652302aa1bSDebojyoti Ghosh .seealso: TSGLEE 4662302aa1bSDebojyoti Ghosh @*/ 4672302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEERegister(TSGLEEType name,PetscInt order,PetscInt s, PetscInt r, 4682302aa1bSDebojyoti Ghosh PetscReal gamma, 4692302aa1bSDebojyoti Ghosh const PetscReal A[],const PetscReal B[], 4702302aa1bSDebojyoti Ghosh const PetscReal U[],const PetscReal V[], 4712302aa1bSDebojyoti Ghosh const PetscReal S[],const PetscReal F[], 472fd96ebc2SDebojyoti Ghosh const PetscReal c[], 473fd96ebc2SDebojyoti Ghosh const PetscReal Fembed[],const PetscReal Ferror[], 47457df6a1bSDebojyoti Ghosh const PetscReal Serror[], 4752302aa1bSDebojyoti Ghosh PetscInt pinterp, const PetscReal binterp[]) 4762302aa1bSDebojyoti Ghosh { 4772302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 4782302aa1bSDebojyoti Ghosh GLEETableauLink link; 4792302aa1bSDebojyoti Ghosh GLEETableau t; 4802302aa1bSDebojyoti Ghosh PetscInt i,j; 4812302aa1bSDebojyoti Ghosh 4822302aa1bSDebojyoti Ghosh PetscFunctionBegin; 4832302aa1bSDebojyoti Ghosh ierr = PetscMalloc(sizeof(*link),&link);CHKERRQ(ierr); 4842302aa1bSDebojyoti Ghosh ierr = PetscMemzero(link,sizeof(*link));CHKERRQ(ierr); 4852302aa1bSDebojyoti Ghosh t = &link->tab; 4862302aa1bSDebojyoti Ghosh ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 4872302aa1bSDebojyoti Ghosh t->order = order; 4882302aa1bSDebojyoti Ghosh t->s = s; 4892302aa1bSDebojyoti Ghosh t->r = r; 4902302aa1bSDebojyoti Ghosh t->gamma = gamma; 4912302aa1bSDebojyoti Ghosh ierr = PetscMalloc5(s*s,&t->A,r*r,&t->V,s,&t->c,r*s,&t->B,s*r,&t->U); CHKERRQ(ierr); 4922302aa1bSDebojyoti Ghosh ierr = PetscMalloc2(r,&t->S,r,&t->F); CHKERRQ(ierr); 4932302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->A,A,s*s*sizeof(A[0]));CHKERRQ(ierr); 4942302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->B,B,r*s*sizeof(B[0]));CHKERRQ(ierr); 4952302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->U,U,s*r*sizeof(U[0]));CHKERRQ(ierr); 4962302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->V,V,r*r*sizeof(V[0]));CHKERRQ(ierr); 4972302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->S,S,r *sizeof(S[0]));CHKERRQ(ierr); 4982302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->F,F,r *sizeof(F[0]));CHKERRQ(ierr); 4992302aa1bSDebojyoti Ghosh if (c) { 5002302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->c,c,s*sizeof(c[0])); CHKERRQ(ierr); 5012302aa1bSDebojyoti Ghosh } else { 5022302aa1bSDebojyoti Ghosh for (i=0; i<s; i++) for (j=0,t->c[i]=0; j<s; j++) t->c[i] += A[i*s+j]; 5032302aa1bSDebojyoti Ghosh } 5042302aa1bSDebojyoti Ghosh ierr = PetscMalloc1(r,&t->Fembed);CHKERRQ(ierr); 505fd96ebc2SDebojyoti Ghosh ierr = PetscMalloc1(r,&t->Ferror);CHKERRQ(ierr); 50657df6a1bSDebojyoti Ghosh ierr = PetscMalloc1(r,&t->Serror);CHKERRQ(ierr); 5072302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->Fembed,Fembed,r*sizeof(Fembed[0]));CHKERRQ(ierr); 508fd96ebc2SDebojyoti Ghosh ierr = PetscMemcpy(t->Ferror,Ferror,r*sizeof(Ferror[0]));CHKERRQ(ierr); 50957df6a1bSDebojyoti Ghosh ierr = PetscMemcpy(t->Serror,Serror,r*sizeof(Serror[0]));CHKERRQ(ierr); 5102302aa1bSDebojyoti Ghosh t->pinterp = pinterp; 5112302aa1bSDebojyoti Ghosh ierr = PetscMalloc1(s*pinterp,&t->binterp);CHKERRQ(ierr); 5122302aa1bSDebojyoti Ghosh ierr = PetscMemcpy(t->binterp,binterp,s*pinterp*sizeof(binterp[0]));CHKERRQ(ierr); 5132302aa1bSDebojyoti Ghosh 5142302aa1bSDebojyoti Ghosh link->next = GLEETableauList; 5152302aa1bSDebojyoti Ghosh GLEETableauList = link; 5162302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 5172302aa1bSDebojyoti Ghosh } 5182302aa1bSDebojyoti Ghosh 5192302aa1bSDebojyoti Ghosh static PetscErrorCode TSEvaluateStep_GLEE(TS ts,PetscInt order,Vec X,PetscBool *done) 5202302aa1bSDebojyoti Ghosh { 5212302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*) ts->data; 5222302aa1bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 5232302aa1bSDebojyoti Ghosh PetscReal h, *B = tab->B, *V = tab->V, 524fd96ebc2SDebojyoti Ghosh *F = tab->F, 525fd96ebc2SDebojyoti Ghosh *Fembed = tab->Fembed; 5262302aa1bSDebojyoti Ghosh PetscInt s = tab->s, r = tab->r, i, j; 5272302aa1bSDebojyoti Ghosh Vec *Y = glee->Y, *YdotStage = glee->YdotStage; 528ec0e3ee2SEmil Constantinescu PetscScalar *ws = glee->swork, *wr = glee->rwork; 5292302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 5302302aa1bSDebojyoti Ghosh 5312302aa1bSDebojyoti Ghosh PetscFunctionBegin; 5322302aa1bSDebojyoti Ghosh 5332302aa1bSDebojyoti Ghosh switch (glee->status) { 5342302aa1bSDebojyoti Ghosh case TS_STEP_INCOMPLETE: 5352302aa1bSDebojyoti Ghosh case TS_STEP_PENDING: 5362302aa1bSDebojyoti Ghosh h = ts->time_step; break; 5372302aa1bSDebojyoti Ghosh case TS_STEP_COMPLETE: 538ed450d42SEmil Constantinescu h = ts->ptime - ts->ptime_prev; break; 5392302aa1bSDebojyoti Ghosh default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 5402302aa1bSDebojyoti Ghosh } 5412302aa1bSDebojyoti Ghosh 5422302aa1bSDebojyoti Ghosh if (order == tab->order) { 5432302aa1bSDebojyoti Ghosh 5442302aa1bSDebojyoti Ghosh /* Note: Irrespective of whether status is TS_STEP_INCOMPLETE 545fd96ebc2SDebojyoti Ghosh or TS_STEP_COMPLETE, glee->X has the solution at the 5462302aa1bSDebojyoti Ghosh beginning of the time step. So no need to roll-back. 5472302aa1bSDebojyoti Ghosh */ 5482302aa1bSDebojyoti Ghosh if (glee->status == TS_STEP_INCOMPLETE) { 5492302aa1bSDebojyoti Ghosh for (i=0; i<r; i++) { 5502302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(Y[i]); CHKERRQ(ierr); 551ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = V[i*r+j]; 552ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(Y[i],r,wr,glee->X); CHKERRQ(ierr); 553ec0e3ee2SEmil Constantinescu for (j=0; j<s; j++) ws[j] = h*B[i*s+j]; 554ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(Y[i],s,ws,YdotStage); CHKERRQ(ierr); 5552302aa1bSDebojyoti Ghosh } 5562302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(X);CHKERRQ(ierr); 557ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = F[j]; 558ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(X,r,wr,Y);CHKERRQ(ierr); 5592302aa1bSDebojyoti Ghosh } else {ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);} 5602302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 5612302aa1bSDebojyoti Ghosh 5622302aa1bSDebojyoti Ghosh } else if (order == tab->order-1) { 5632302aa1bSDebojyoti Ghosh 5642302aa1bSDebojyoti Ghosh /* Complete with the embedded method (Fembed) */ 5652302aa1bSDebojyoti Ghosh for (i=0; i<r; i++) { 5662302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(Y[i]); CHKERRQ(ierr); 567ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = V[i*r+j]; 568ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(Y[i],r,wr,glee->X); CHKERRQ(ierr); 569ec0e3ee2SEmil Constantinescu for (j=0; j<s; j++) ws[j] = h*B[i*s+j]; 570ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(Y[i],s,ws,YdotStage); CHKERRQ(ierr); 5712302aa1bSDebojyoti Ghosh } 5722302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(X);CHKERRQ(ierr); 573ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = Fembed[j]; 574ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(X,r,wr,Y);CHKERRQ(ierr); 575fd96ebc2SDebojyoti Ghosh 5762302aa1bSDebojyoti Ghosh if (done) *done = PETSC_TRUE; 5772302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 5782302aa1bSDebojyoti Ghosh } 5792302aa1bSDebojyoti Ghosh if (done) *done = PETSC_FALSE; 5802302aa1bSDebojyoti Ghosh else SETERRQ3(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"GLEE '%s' of order %D cannot evaluate step at order %D",tab->name,tab->order,order); 5812302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 5822302aa1bSDebojyoti Ghosh } 5832302aa1bSDebojyoti Ghosh 5842302aa1bSDebojyoti Ghosh static PetscErrorCode TSStep_GLEE(TS ts) 5852302aa1bSDebojyoti Ghosh { 5862302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 5872302aa1bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 5882302aa1bSDebojyoti Ghosh const PetscInt s = tab->s, r = tab->r; 5892302aa1bSDebojyoti Ghosh PetscReal *A = tab->A, *U = tab->U, 5902302aa1bSDebojyoti Ghosh *F = tab->F, 5912302aa1bSDebojyoti Ghosh *c = tab->c; 5922302aa1bSDebojyoti Ghosh Vec *Y = glee->Y, *X = glee->X, 5932302aa1bSDebojyoti Ghosh *YStage = glee->YStage, 5942302aa1bSDebojyoti Ghosh *YdotStage = glee->YdotStage, 5952302aa1bSDebojyoti Ghosh W = glee->W; 5962302aa1bSDebojyoti Ghosh SNES snes; 597ec0e3ee2SEmil Constantinescu PetscScalar *ws = glee->swork, *wr = glee->rwork; 5982302aa1bSDebojyoti Ghosh TSAdapt adapt; 5992302aa1bSDebojyoti Ghosh PetscInt i,j,reject,next_scheme,its,lits; 6002302aa1bSDebojyoti Ghosh PetscReal next_time_step; 6012302aa1bSDebojyoti Ghosh PetscReal t; 6022302aa1bSDebojyoti Ghosh PetscBool accept; 6032302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 6042302aa1bSDebojyoti Ghosh 6052302aa1bSDebojyoti Ghosh PetscFunctionBegin; 606642f3702SEmil Constantinescu ierr = PetscCitationsRegister(citation,&cited);CHKERRQ(ierr); 607642f3702SEmil Constantinescu 6082302aa1bSDebojyoti Ghosh for (i=0; i<r; i++) { ierr = VecCopy(Y[i],X[i]); CHKERRQ(ierr); } 6092302aa1bSDebojyoti Ghosh 6102302aa1bSDebojyoti Ghosh ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 6112302aa1bSDebojyoti Ghosh next_time_step = ts->time_step; 6122302aa1bSDebojyoti Ghosh t = ts->ptime; 6132302aa1bSDebojyoti Ghosh accept = PETSC_TRUE; 6142302aa1bSDebojyoti Ghosh glee->status = TS_STEP_INCOMPLETE; 6152302aa1bSDebojyoti Ghosh 6162302aa1bSDebojyoti Ghosh for (reject=0; reject<ts->max_reject && !ts->reason; reject++,ts->reject++) { 6172302aa1bSDebojyoti Ghosh 6182302aa1bSDebojyoti Ghosh PetscReal h = ts->time_step; 6192302aa1bSDebojyoti Ghosh ierr = TSPreStep(ts);CHKERRQ(ierr); 6202302aa1bSDebojyoti Ghosh 6212302aa1bSDebojyoti Ghosh for (i=0; i<s; i++) { 6222302aa1bSDebojyoti Ghosh 6232302aa1bSDebojyoti Ghosh glee->stage_time = t + h*c[i]; 6242302aa1bSDebojyoti Ghosh ierr = TSPreStage(ts,glee->stage_time); CHKERRQ(ierr); 6252302aa1bSDebojyoti Ghosh 6262302aa1bSDebojyoti Ghosh if (A[i*s+i] == 0) { /* Explicit stage */ 6272302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(YStage[i]);CHKERRQ(ierr); 628ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = U[i*r+j]; 629ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(YStage[i],r,wr,X);CHKERRQ(ierr); 630ec0e3ee2SEmil Constantinescu for (j=0; j<i; j++) ws[j] = h*A[i*s+j]; 631ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(YStage[i],i,ws,YdotStage);CHKERRQ(ierr); 6322302aa1bSDebojyoti Ghosh } else { /* Implicit stage */ 6332302aa1bSDebojyoti Ghosh glee->scoeff = 1.0/A[i*s+i]; 6342302aa1bSDebojyoti Ghosh /* compute right-hand-side */ 6352302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(W);CHKERRQ(ierr); 636ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = U[i*r+j]; 637ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(W,r,wr,X);CHKERRQ(ierr); 638ec0e3ee2SEmil Constantinescu for (j=0; j<i; j++) ws[j] = h*A[i*s+j]; 639ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(W,i,ws,YdotStage);CHKERRQ(ierr); 6402302aa1bSDebojyoti Ghosh ierr = VecScale(W,glee->scoeff/h);CHKERRQ(ierr); 6412302aa1bSDebojyoti Ghosh /* set initial guess */ 6422302aa1bSDebojyoti Ghosh ierr = VecCopy(i>0 ? YStage[i-1] : ts->vec_sol,YStage[i]);CHKERRQ(ierr); 6432302aa1bSDebojyoti Ghosh /* solve for this stage */ 6442302aa1bSDebojyoti Ghosh ierr = SNESSolve(snes,W,YStage[i]);CHKERRQ(ierr); 6452302aa1bSDebojyoti Ghosh ierr = SNESGetIterationNumber(snes,&its);CHKERRQ(ierr); 6462302aa1bSDebojyoti Ghosh ierr = SNESGetLinearSolveIterations(snes,&lits);CHKERRQ(ierr); 6472302aa1bSDebojyoti Ghosh ts->snes_its += its; ts->ksp_its += lits; 6482302aa1bSDebojyoti Ghosh } 6492302aa1bSDebojyoti Ghosh ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 650d6629dc5SEmil Constantinescu ierr = TSAdaptCheckStage(adapt,ts,glee->stage_time,YStage[i],&accept);CHKERRQ(ierr); 6512302aa1bSDebojyoti Ghosh if (!accept) goto reject_step; 6522302aa1bSDebojyoti Ghosh ierr = TSPostStage(ts,glee->stage_time,i,YStage); CHKERRQ(ierr); 6532302aa1bSDebojyoti Ghosh ierr = TSComputeRHSFunction(ts,t+h*c[i],YStage[i],YdotStage[i]);CHKERRQ(ierr); 6542302aa1bSDebojyoti Ghosh } 6552302aa1bSDebojyoti Ghosh ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 6562302aa1bSDebojyoti Ghosh glee->status = TS_STEP_PENDING; 6572302aa1bSDebojyoti Ghosh 6582302aa1bSDebojyoti Ghosh /* Register only the current method as a candidate because we're not supporting multiple candidates yet. */ 6592302aa1bSDebojyoti Ghosh ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 6602302aa1bSDebojyoti Ghosh ierr = TSAdaptCandidatesClear(adapt);CHKERRQ(ierr); 6611917a363SLisandro Dalcin ierr = TSAdaptCandidateAdd(adapt,tab->name,tab->order,1,tab->ccfl,(PetscReal)tab->s,PETSC_TRUE);CHKERRQ(ierr); 6622302aa1bSDebojyoti Ghosh ierr = TSAdaptChoose(adapt,ts,ts->time_step,&next_scheme,&next_time_step,&accept);CHKERRQ(ierr); 6632302aa1bSDebojyoti Ghosh if (accept) { 6642302aa1bSDebojyoti Ghosh /* ignore next_scheme for now */ 6652302aa1bSDebojyoti Ghosh ts->ptime += ts->time_step; 6662302aa1bSDebojyoti Ghosh ts->time_step = next_time_step; 6672302aa1bSDebojyoti Ghosh glee->status = TS_STEP_COMPLETE; 6680a01e1b2SEmil Constantinescu /* compute and store the global error */ 6690a01e1b2SEmil Constantinescu /* Note: this is not needed if TSAdaptGLEE is not used */ 6700a01e1b2SEmil Constantinescu ierr = TSGetTimeError(ts,0,&(glee->yGErr));CHKERRQ(ierr); 6712302aa1bSDebojyoti Ghosh ierr = PetscObjectComposedDataSetReal((PetscObject)ts->vec_sol,explicit_stage_time_id,ts->ptime);CHKERRQ(ierr); 6722302aa1bSDebojyoti Ghosh break; 6732302aa1bSDebojyoti Ghosh } else { /* Roll back the current step */ 674ec0e3ee2SEmil Constantinescu for (j=0; j<r; j++) wr[j] = F[j]; 675ec0e3ee2SEmil Constantinescu ierr = VecMAXPY(ts->vec_sol,r,wr,X);CHKERRQ(ierr); 6762302aa1bSDebojyoti Ghosh ts->time_step = next_time_step; 6772302aa1bSDebojyoti Ghosh glee->status = TS_STEP_INCOMPLETE; 6782302aa1bSDebojyoti Ghosh } 6792302aa1bSDebojyoti Ghosh reject_step: continue; 6802302aa1bSDebojyoti Ghosh } 6812302aa1bSDebojyoti Ghosh if (glee->status != TS_STEP_COMPLETE && !ts->reason) ts->reason = TS_DIVERGED_STEP_REJECTED; 6822302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 6832302aa1bSDebojyoti Ghosh } 6842302aa1bSDebojyoti Ghosh 6852302aa1bSDebojyoti Ghosh static PetscErrorCode TSInterpolate_GLEE(TS ts,PetscReal itime,Vec X) 6862302aa1bSDebojyoti Ghosh { 6872302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 6882302aa1bSDebojyoti Ghosh PetscInt s=glee->tableau->s, pinterp=glee->tableau->pinterp,i,j; 6892302aa1bSDebojyoti Ghosh PetscReal h,tt,t; 6902302aa1bSDebojyoti Ghosh PetscScalar *b; 6912302aa1bSDebojyoti Ghosh const PetscReal *B = glee->tableau->binterp; 6922302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 6932302aa1bSDebojyoti Ghosh 6942302aa1bSDebojyoti Ghosh PetscFunctionBegin; 6952302aa1bSDebojyoti Ghosh if (!B) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSGLEE %s does not have an interpolation formula",glee->tableau->name); 6962302aa1bSDebojyoti Ghosh switch (glee->status) { 6972302aa1bSDebojyoti Ghosh case TS_STEP_INCOMPLETE: 6982302aa1bSDebojyoti Ghosh case TS_STEP_PENDING: 6992302aa1bSDebojyoti Ghosh h = ts->time_step; 7002302aa1bSDebojyoti Ghosh t = (itime - ts->ptime)/h; 7012302aa1bSDebojyoti Ghosh break; 7022302aa1bSDebojyoti Ghosh case TS_STEP_COMPLETE: 703ed450d42SEmil Constantinescu h = ts->ptime - ts->ptime_prev; 7042302aa1bSDebojyoti Ghosh t = (itime - ts->ptime)/h + 1; /* In the interval [0,1] */ 7052302aa1bSDebojyoti Ghosh break; 7062302aa1bSDebojyoti Ghosh default: SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_PLIB,"Invalid TSStepStatus"); 7072302aa1bSDebojyoti Ghosh } 7082302aa1bSDebojyoti Ghosh ierr = PetscMalloc1(s,&b);CHKERRQ(ierr); 7092302aa1bSDebojyoti Ghosh for (i=0; i<s; i++) b[i] = 0; 7102302aa1bSDebojyoti Ghosh for (j=0,tt=t; j<pinterp; j++,tt*=t) { 7112302aa1bSDebojyoti Ghosh for (i=0; i<s; i++) { 7122302aa1bSDebojyoti Ghosh b[i] += h * B[i*pinterp+j] * tt; 7132302aa1bSDebojyoti Ghosh } 7142302aa1bSDebojyoti Ghosh } 7152302aa1bSDebojyoti Ghosh ierr = VecCopy(glee->YStage[0],X);CHKERRQ(ierr); 7162302aa1bSDebojyoti Ghosh ierr = VecMAXPY(X,s,b,glee->YdotStage);CHKERRQ(ierr); 7172302aa1bSDebojyoti Ghosh ierr = PetscFree(b);CHKERRQ(ierr); 7182302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 7192302aa1bSDebojyoti Ghosh } 7202302aa1bSDebojyoti Ghosh 7212302aa1bSDebojyoti Ghosh /*------------------------------------------------------------*/ 7222302aa1bSDebojyoti Ghosh static PetscErrorCode TSReset_GLEE(TS ts) 7232302aa1bSDebojyoti Ghosh { 7242302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 7252302aa1bSDebojyoti Ghosh PetscInt s, r; 7262302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 7272302aa1bSDebojyoti Ghosh 7282302aa1bSDebojyoti Ghosh PetscFunctionBegin; 7292302aa1bSDebojyoti Ghosh if (!glee->tableau) PetscFunctionReturn(0); 7302302aa1bSDebojyoti Ghosh s = glee->tableau->s; 7312302aa1bSDebojyoti Ghosh r = glee->tableau->r; 7322302aa1bSDebojyoti Ghosh ierr = VecDestroyVecs(r,&glee->Y);CHKERRQ(ierr); 7332302aa1bSDebojyoti Ghosh ierr = VecDestroyVecs(r,&glee->X);CHKERRQ(ierr); 7342302aa1bSDebojyoti Ghosh ierr = VecDestroyVecs(s,&glee->YStage);CHKERRQ(ierr); 7352302aa1bSDebojyoti Ghosh ierr = VecDestroyVecs(s,&glee->YdotStage);CHKERRQ(ierr); 7362302aa1bSDebojyoti Ghosh ierr = VecDestroy(&glee->Ydot);CHKERRQ(ierr); 7370a01e1b2SEmil Constantinescu ierr = VecDestroy(&glee->yGErr);CHKERRQ(ierr); 7382302aa1bSDebojyoti Ghosh ierr = VecDestroy(&glee->W);CHKERRQ(ierr); 739ec0e3ee2SEmil Constantinescu ierr = PetscFree2(glee->swork,glee->rwork);CHKERRQ(ierr); 7402302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 7412302aa1bSDebojyoti Ghosh } 7422302aa1bSDebojyoti Ghosh 7432302aa1bSDebojyoti Ghosh static PetscErrorCode TSDestroy_GLEE(TS ts) 7442302aa1bSDebojyoti Ghosh { 7452302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 7462302aa1bSDebojyoti Ghosh 7472302aa1bSDebojyoti Ghosh PetscFunctionBegin; 7482302aa1bSDebojyoti Ghosh ierr = TSReset_GLEE(ts);CHKERRQ(ierr); 7492302aa1bSDebojyoti Ghosh ierr = PetscFree(ts->data);CHKERRQ(ierr); 7502302aa1bSDebojyoti Ghosh ierr = PetscObjectComposeFunction((PetscObject)ts,"TSGLEEGetType_C",NULL);CHKERRQ(ierr); 7512302aa1bSDebojyoti Ghosh ierr = PetscObjectComposeFunction((PetscObject)ts,"TSGLEESetType_C",NULL);CHKERRQ(ierr); 7522302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 7532302aa1bSDebojyoti Ghosh } 7542302aa1bSDebojyoti Ghosh 7552302aa1bSDebojyoti Ghosh static PetscErrorCode TSGLEEGetVecs(TS ts,DM dm,Vec *Ydot) 7562302aa1bSDebojyoti Ghosh { 7572302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 7582302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 7592302aa1bSDebojyoti Ghosh 7602302aa1bSDebojyoti Ghosh PetscFunctionBegin; 7612302aa1bSDebojyoti Ghosh if (Ydot) { 7622302aa1bSDebojyoti Ghosh if (dm && dm != ts->dm) { 7632302aa1bSDebojyoti Ghosh ierr = DMGetNamedGlobalVector(dm,"TSGLEE_Ydot",Ydot);CHKERRQ(ierr); 7642302aa1bSDebojyoti Ghosh } else *Ydot = glee->Ydot; 7652302aa1bSDebojyoti Ghosh } 7662302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 7672302aa1bSDebojyoti Ghosh } 7682302aa1bSDebojyoti Ghosh 7692302aa1bSDebojyoti Ghosh 7702302aa1bSDebojyoti Ghosh static PetscErrorCode TSGLEERestoreVecs(TS ts,DM dm,Vec *Ydot) 7712302aa1bSDebojyoti Ghosh { 7722302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 7732302aa1bSDebojyoti Ghosh 7742302aa1bSDebojyoti Ghosh PetscFunctionBegin; 7752302aa1bSDebojyoti Ghosh if (Ydot) { 7762302aa1bSDebojyoti Ghosh if (dm && dm != ts->dm) { 7772302aa1bSDebojyoti Ghosh ierr = DMRestoreNamedGlobalVector(dm,"TSGLEE_Ydot",Ydot);CHKERRQ(ierr); 7782302aa1bSDebojyoti Ghosh } 7792302aa1bSDebojyoti Ghosh } 7802302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 7812302aa1bSDebojyoti Ghosh } 7822302aa1bSDebojyoti Ghosh 7832302aa1bSDebojyoti Ghosh /* 7842302aa1bSDebojyoti Ghosh This defines the nonlinear equation that is to be solved with SNES 7852302aa1bSDebojyoti Ghosh */ 7862302aa1bSDebojyoti Ghosh static PetscErrorCode SNESTSFormFunction_GLEE(SNES snes,Vec X,Vec F,TS ts) 7872302aa1bSDebojyoti Ghosh { 7882302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 7892302aa1bSDebojyoti Ghosh DM dm,dmsave; 7902302aa1bSDebojyoti Ghosh Vec Ydot; 7912302aa1bSDebojyoti Ghosh PetscReal shift = glee->scoeff / ts->time_step; 7922302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 7932302aa1bSDebojyoti Ghosh 7942302aa1bSDebojyoti Ghosh PetscFunctionBegin; 7952302aa1bSDebojyoti Ghosh ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 7962302aa1bSDebojyoti Ghosh ierr = TSGLEEGetVecs(ts,dm,&Ydot);CHKERRQ(ierr); 7972302aa1bSDebojyoti Ghosh /* Set Ydot = shift*X */ 7982302aa1bSDebojyoti Ghosh ierr = VecCopy(X,Ydot);CHKERRQ(ierr); 7992302aa1bSDebojyoti Ghosh ierr = VecScale(Ydot,shift);CHKERRQ(ierr); 8002302aa1bSDebojyoti Ghosh dmsave = ts->dm; 8012302aa1bSDebojyoti Ghosh ts->dm = dm; 8022302aa1bSDebojyoti Ghosh 8032302aa1bSDebojyoti Ghosh ierr = TSComputeIFunction(ts,glee->stage_time,X,Ydot,F,PETSC_FALSE);CHKERRQ(ierr); 8042302aa1bSDebojyoti Ghosh 8052302aa1bSDebojyoti Ghosh ts->dm = dmsave; 8062302aa1bSDebojyoti Ghosh ierr = TSGLEERestoreVecs(ts,dm,&Ydot);CHKERRQ(ierr); 8072302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8082302aa1bSDebojyoti Ghosh } 8092302aa1bSDebojyoti Ghosh 8102302aa1bSDebojyoti Ghosh static PetscErrorCode SNESTSFormJacobian_GLEE(SNES snes,Vec X,Mat A,Mat B,TS ts) 8112302aa1bSDebojyoti Ghosh { 8122302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 8132302aa1bSDebojyoti Ghosh DM dm,dmsave; 8142302aa1bSDebojyoti Ghosh Vec Ydot; 8152302aa1bSDebojyoti Ghosh PetscReal shift = glee->scoeff / ts->time_step; 8162302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 8172302aa1bSDebojyoti Ghosh 8182302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8192302aa1bSDebojyoti Ghosh ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); 8202302aa1bSDebojyoti Ghosh ierr = TSGLEEGetVecs(ts,dm,&Ydot);CHKERRQ(ierr); 8212302aa1bSDebojyoti Ghosh /* glee->Ydot has already been computed in SNESTSFormFunction_GLEE (SNES guarantees this) */ 8222302aa1bSDebojyoti Ghosh dmsave = ts->dm; 8232302aa1bSDebojyoti Ghosh ts->dm = dm; 8242302aa1bSDebojyoti Ghosh 8252302aa1bSDebojyoti Ghosh ierr = TSComputeIJacobian(ts,glee->stage_time,X,Ydot,shift,A,B,PETSC_FALSE);CHKERRQ(ierr); 8262302aa1bSDebojyoti Ghosh 8272302aa1bSDebojyoti Ghosh ts->dm = dmsave; 8282302aa1bSDebojyoti Ghosh ierr = TSGLEERestoreVecs(ts,dm,&Ydot);CHKERRQ(ierr); 8292302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8302302aa1bSDebojyoti Ghosh } 8312302aa1bSDebojyoti Ghosh 8322302aa1bSDebojyoti Ghosh static PetscErrorCode DMCoarsenHook_TSGLEE(DM fine,DM coarse,void *ctx) 8332302aa1bSDebojyoti Ghosh { 8342302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8352302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8362302aa1bSDebojyoti Ghosh } 8372302aa1bSDebojyoti Ghosh 8382302aa1bSDebojyoti Ghosh static PetscErrorCode DMRestrictHook_TSGLEE(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 8392302aa1bSDebojyoti Ghosh { 8402302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8412302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8422302aa1bSDebojyoti Ghosh } 8432302aa1bSDebojyoti Ghosh 8442302aa1bSDebojyoti Ghosh 8452302aa1bSDebojyoti Ghosh static PetscErrorCode DMSubDomainHook_TSGLEE(DM dm,DM subdm,void *ctx) 8462302aa1bSDebojyoti Ghosh { 8472302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8482302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8492302aa1bSDebojyoti Ghosh } 8502302aa1bSDebojyoti Ghosh 8512302aa1bSDebojyoti Ghosh static PetscErrorCode DMSubDomainRestrictHook_TSGLEE(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx) 8522302aa1bSDebojyoti Ghosh { 8532302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8542302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8552302aa1bSDebojyoti Ghosh } 8562302aa1bSDebojyoti Ghosh 8572302aa1bSDebojyoti Ghosh static PetscErrorCode TSSetUp_GLEE(TS ts) 8582302aa1bSDebojyoti Ghosh { 8592302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 8602302aa1bSDebojyoti Ghosh GLEETableau tab; 8612302aa1bSDebojyoti Ghosh PetscInt s,r; 8622302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 8632302aa1bSDebojyoti Ghosh DM dm; 8642302aa1bSDebojyoti Ghosh 8652302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8662302aa1bSDebojyoti Ghosh if (!glee->tableau) { 8672302aa1bSDebojyoti Ghosh ierr = TSGLEESetType(ts,TSGLEEDefaultType);CHKERRQ(ierr); 8682302aa1bSDebojyoti Ghosh } 8692302aa1bSDebojyoti Ghosh tab = glee->tableau; 8702302aa1bSDebojyoti Ghosh s = tab->s; 8712302aa1bSDebojyoti Ghosh r = tab->r; 8722302aa1bSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,r,&glee->Y);CHKERRQ(ierr); 8732302aa1bSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,r,&glee->X);CHKERRQ(ierr); 8742302aa1bSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&glee->YStage);CHKERRQ(ierr); 8752302aa1bSDebojyoti Ghosh ierr = VecDuplicateVecs(ts->vec_sol,s,&glee->YdotStage);CHKERRQ(ierr); 8762302aa1bSDebojyoti Ghosh ierr = VecDuplicate(ts->vec_sol,&glee->Ydot);CHKERRQ(ierr); 8770a01e1b2SEmil Constantinescu ierr = VecDuplicate(ts->vec_sol,&glee->yGErr);CHKERRQ(ierr); 878657c1e31SEmil Constantinescu ierr = VecZeroEntries(glee->yGErr);CHKERRQ(ierr); 8792302aa1bSDebojyoti Ghosh ierr = VecDuplicate(ts->vec_sol,&glee->W);CHKERRQ(ierr); 880ec0e3ee2SEmil Constantinescu ierr = PetscMalloc2(s,&glee->swork,r,&glee->rwork); CHKERRQ(ierr); 8812302aa1bSDebojyoti Ghosh ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 8822302aa1bSDebojyoti Ghosh if (dm) { 8832302aa1bSDebojyoti Ghosh ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSGLEE,DMRestrictHook_TSGLEE,ts);CHKERRQ(ierr); 8842302aa1bSDebojyoti Ghosh ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSGLEE,DMSubDomainRestrictHook_TSGLEE,ts);CHKERRQ(ierr); 8852302aa1bSDebojyoti Ghosh } 8862302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 8872302aa1bSDebojyoti Ghosh } 8882302aa1bSDebojyoti Ghosh 8892302aa1bSDebojyoti Ghosh PetscErrorCode TSStartingMethod_GLEE(TS ts) 8902302aa1bSDebojyoti Ghosh { 8912302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 8926e2e232bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 8936e2e232bSDebojyoti Ghosh PetscInt r=tab->r,i; 8946e2e232bSDebojyoti Ghosh PetscReal *S=tab->S; 8952302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 8962302aa1bSDebojyoti Ghosh 8972302aa1bSDebojyoti Ghosh PetscFunctionBegin; 8982302aa1bSDebojyoti Ghosh for (i=0; i<r; i++) { 8992302aa1bSDebojyoti Ghosh ierr = VecZeroEntries(glee->Y[i]);CHKERRQ(ierr); 9002302aa1bSDebojyoti Ghosh ierr = VecAXPY(glee->Y[i],S[i],ts->vec_sol);CHKERRQ(ierr); 9012302aa1bSDebojyoti Ghosh } 9022302aa1bSDebojyoti Ghosh 9032302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 9042302aa1bSDebojyoti Ghosh } 9052302aa1bSDebojyoti Ghosh 9062302aa1bSDebojyoti Ghosh 9072302aa1bSDebojyoti Ghosh /*------------------------------------------------------------*/ 9082302aa1bSDebojyoti Ghosh 9096b234c65SEmil Constantinescu static PetscErrorCode TSSetFromOptions_GLEE(PetscOptionItems *PetscOptionsObject,TS ts) 9102302aa1bSDebojyoti Ghosh { 9112302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 9122302aa1bSDebojyoti Ghosh char gleetype[256]; 9132302aa1bSDebojyoti Ghosh 9142302aa1bSDebojyoti Ghosh PetscFunctionBegin; 9152302aa1bSDebojyoti Ghosh ierr = PetscOptionsHead(PetscOptionsObject,"GLEE ODE solver options");CHKERRQ(ierr); 9162302aa1bSDebojyoti Ghosh { 9172302aa1bSDebojyoti Ghosh GLEETableauLink link; 9182302aa1bSDebojyoti Ghosh PetscInt count,choice; 9192302aa1bSDebojyoti Ghosh PetscBool flg; 9202302aa1bSDebojyoti Ghosh const char **namelist; 9212302aa1bSDebojyoti Ghosh 9222302aa1bSDebojyoti Ghosh ierr = PetscStrncpy(gleetype,TSGLEEDefaultType,sizeof(gleetype));CHKERRQ(ierr); 9232302aa1bSDebojyoti Ghosh for (link=GLEETableauList,count=0; link; link=link->next,count++) ; 9242302aa1bSDebojyoti Ghosh ierr = PetscMalloc1(count,&namelist);CHKERRQ(ierr); 9252302aa1bSDebojyoti Ghosh for (link=GLEETableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 9262302aa1bSDebojyoti Ghosh ierr = PetscOptionsEList("-ts_glee_type","Family of GLEE method","TSGLEESetType",(const char*const*)namelist,count,gleetype,&choice,&flg);CHKERRQ(ierr); 9272302aa1bSDebojyoti Ghosh ierr = TSGLEESetType(ts,flg ? namelist[choice] : gleetype);CHKERRQ(ierr); 9282302aa1bSDebojyoti Ghosh ierr = PetscFree(namelist);CHKERRQ(ierr); 9292302aa1bSDebojyoti Ghosh } 9302302aa1bSDebojyoti Ghosh ierr = PetscOptionsTail();CHKERRQ(ierr); 9312302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 9322302aa1bSDebojyoti Ghosh } 9332302aa1bSDebojyoti Ghosh 9342302aa1bSDebojyoti Ghosh static PetscErrorCode PetscFormatRealArray(char buf[],size_t len,const char *fmt,PetscInt n,const PetscReal x[]) 9352302aa1bSDebojyoti Ghosh { 9362302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 9372302aa1bSDebojyoti Ghosh PetscInt i; 9382302aa1bSDebojyoti Ghosh size_t left,count; 9392302aa1bSDebojyoti Ghosh char *p; 9402302aa1bSDebojyoti Ghosh 9412302aa1bSDebojyoti Ghosh PetscFunctionBegin; 9422302aa1bSDebojyoti Ghosh for (i=0,p=buf,left=len; i<n; i++) { 9432302aa1bSDebojyoti Ghosh ierr = PetscSNPrintfCount(p,left,fmt,&count,x[i]);CHKERRQ(ierr); 9442302aa1bSDebojyoti Ghosh if (count >= left) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Insufficient space in buffer"); 9452302aa1bSDebojyoti Ghosh left -= count; 9462302aa1bSDebojyoti Ghosh p += count; 9472302aa1bSDebojyoti Ghosh *p++ = ' '; 9482302aa1bSDebojyoti Ghosh } 9492302aa1bSDebojyoti Ghosh p[i ? 0 : -1] = 0; 9502302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 9512302aa1bSDebojyoti Ghosh } 9522302aa1bSDebojyoti Ghosh 9532302aa1bSDebojyoti Ghosh static PetscErrorCode TSView_GLEE(TS ts,PetscViewer viewer) 9542302aa1bSDebojyoti Ghosh { 9552302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 9562302aa1bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 9572302aa1bSDebojyoti Ghosh PetscBool iascii; 9582302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 9592302aa1bSDebojyoti Ghosh 9602302aa1bSDebojyoti Ghosh PetscFunctionBegin; 9612302aa1bSDebojyoti Ghosh ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 9622302aa1bSDebojyoti Ghosh if (iascii) { 9632302aa1bSDebojyoti Ghosh TSGLEEType gleetype; 9642302aa1bSDebojyoti Ghosh char buf[512]; 9652302aa1bSDebojyoti Ghosh ierr = TSGLEEGetType(ts,&gleetype);CHKERRQ(ierr); 966*efd4aadfSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," GLEE type %s\n",gleetype);CHKERRQ(ierr); 9672302aa1bSDebojyoti Ghosh ierr = PetscFormatRealArray(buf,sizeof(buf),"% 8.6f",tab->s,tab->c);CHKERRQ(ierr); 9682302aa1bSDebojyoti Ghosh ierr = PetscViewerASCIIPrintf(viewer," Abscissa c = %s\n",buf);CHKERRQ(ierr); 9692302aa1bSDebojyoti Ghosh /* Note: print out r as well */ 9702302aa1bSDebojyoti Ghosh } 9712302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 9722302aa1bSDebojyoti Ghosh } 9732302aa1bSDebojyoti Ghosh 9742302aa1bSDebojyoti Ghosh static PetscErrorCode TSLoad_GLEE(TS ts,PetscViewer viewer) 9752302aa1bSDebojyoti Ghosh { 9762302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 9772302aa1bSDebojyoti Ghosh SNES snes; 9782302aa1bSDebojyoti Ghosh TSAdapt tsadapt; 9792302aa1bSDebojyoti Ghosh 9802302aa1bSDebojyoti Ghosh PetscFunctionBegin; 9812302aa1bSDebojyoti Ghosh ierr = TSGetAdapt(ts,&tsadapt);CHKERRQ(ierr); 9822302aa1bSDebojyoti Ghosh ierr = TSAdaptLoad(tsadapt,viewer);CHKERRQ(ierr); 9832302aa1bSDebojyoti Ghosh ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); 9842302aa1bSDebojyoti Ghosh ierr = SNESLoad(snes,viewer);CHKERRQ(ierr); 9852302aa1bSDebojyoti Ghosh /* function and Jacobian context for SNES when used with TS is always ts object */ 9862302aa1bSDebojyoti Ghosh ierr = SNESSetFunction(snes,NULL,NULL,ts);CHKERRQ(ierr); 9872302aa1bSDebojyoti Ghosh ierr = SNESSetJacobian(snes,NULL,NULL,NULL,ts);CHKERRQ(ierr); 9882302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 9892302aa1bSDebojyoti Ghosh } 9902302aa1bSDebojyoti Ghosh 9912302aa1bSDebojyoti Ghosh /*@C 9922302aa1bSDebojyoti Ghosh TSGLEESetType - Set the type of GLEE scheme 9932302aa1bSDebojyoti Ghosh 9942302aa1bSDebojyoti Ghosh Logically collective 9952302aa1bSDebojyoti Ghosh 9962302aa1bSDebojyoti Ghosh Input Parameter: 9972302aa1bSDebojyoti Ghosh + ts - timestepping context 9982302aa1bSDebojyoti Ghosh - gleetype - type of GLEE-scheme 9992302aa1bSDebojyoti Ghosh 10002302aa1bSDebojyoti Ghosh Level: intermediate 10012302aa1bSDebojyoti Ghosh 10022302aa1bSDebojyoti Ghosh .seealso: TSGLEEGetType(), TSGLEE 10032302aa1bSDebojyoti Ghosh @*/ 10042302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEESetType(TS ts,TSGLEEType gleetype) 10052302aa1bSDebojyoti Ghosh { 10062302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 10072302aa1bSDebojyoti Ghosh 10082302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10092302aa1bSDebojyoti Ghosh PetscValidHeaderSpecific(ts,TS_CLASSID,1); 1010b92453a8SLisandro Dalcin PetscValidCharPointer(gleetype,2); 10112302aa1bSDebojyoti Ghosh ierr = PetscTryMethod(ts,"TSGLEESetType_C",(TS,TSGLEEType),(ts,gleetype));CHKERRQ(ierr); 10122302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10132302aa1bSDebojyoti Ghosh } 10142302aa1bSDebojyoti Ghosh 10152302aa1bSDebojyoti Ghosh /*@C 10162302aa1bSDebojyoti Ghosh TSGLEEGetType - Get the type of GLEE scheme 10172302aa1bSDebojyoti Ghosh 10182302aa1bSDebojyoti Ghosh Logically collective 10192302aa1bSDebojyoti Ghosh 10202302aa1bSDebojyoti Ghosh Input Parameter: 10212302aa1bSDebojyoti Ghosh . ts - timestepping context 10222302aa1bSDebojyoti Ghosh 10232302aa1bSDebojyoti Ghosh Output Parameter: 10242302aa1bSDebojyoti Ghosh . gleetype - type of GLEE-scheme 10252302aa1bSDebojyoti Ghosh 10262302aa1bSDebojyoti Ghosh Level: intermediate 10272302aa1bSDebojyoti Ghosh 10282302aa1bSDebojyoti Ghosh .seealso: TSGLEESetType() 10292302aa1bSDebojyoti Ghosh @*/ 10302302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEEGetType(TS ts,TSGLEEType *gleetype) 10312302aa1bSDebojyoti Ghosh { 10322302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 10332302aa1bSDebojyoti Ghosh 10342302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10352302aa1bSDebojyoti Ghosh PetscValidHeaderSpecific(ts,TS_CLASSID,1); 10362302aa1bSDebojyoti Ghosh ierr = PetscUseMethod(ts,"TSGLEEGetType_C",(TS,TSGLEEType*),(ts,gleetype));CHKERRQ(ierr); 10372302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10382302aa1bSDebojyoti Ghosh } 10392302aa1bSDebojyoti Ghosh 10402302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEEGetType_GLEE(TS ts,TSGLEEType *gleetype) 10412302aa1bSDebojyoti Ghosh { 10422302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 10432302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 10442302aa1bSDebojyoti Ghosh 10452302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10462302aa1bSDebojyoti Ghosh if (!glee->tableau) { 10472302aa1bSDebojyoti Ghosh ierr = TSGLEESetType(ts,TSGLEEDefaultType);CHKERRQ(ierr); 10482302aa1bSDebojyoti Ghosh } 10492302aa1bSDebojyoti Ghosh *gleetype = glee->tableau->name; 10502302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10512302aa1bSDebojyoti Ghosh } 10522302aa1bSDebojyoti Ghosh PetscErrorCode TSGLEESetType_GLEE(TS ts,TSGLEEType gleetype) 10532302aa1bSDebojyoti Ghosh { 10542302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 10552302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 10562302aa1bSDebojyoti Ghosh PetscBool match; 10572302aa1bSDebojyoti Ghosh GLEETableauLink link; 10582302aa1bSDebojyoti Ghosh 10592302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10602302aa1bSDebojyoti Ghosh if (glee->tableau) { 10612302aa1bSDebojyoti Ghosh ierr = PetscStrcmp(glee->tableau->name,gleetype,&match);CHKERRQ(ierr); 10622302aa1bSDebojyoti Ghosh if (match) PetscFunctionReturn(0); 10632302aa1bSDebojyoti Ghosh } 10642302aa1bSDebojyoti Ghosh for (link = GLEETableauList; link; link=link->next) { 10652302aa1bSDebojyoti Ghosh ierr = PetscStrcmp(link->tab.name,gleetype,&match);CHKERRQ(ierr); 10662302aa1bSDebojyoti Ghosh if (match) { 10672302aa1bSDebojyoti Ghosh ierr = TSReset_GLEE(ts);CHKERRQ(ierr); 10682302aa1bSDebojyoti Ghosh glee->tableau = &link->tab; 10692302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10702302aa1bSDebojyoti Ghosh } 10712302aa1bSDebojyoti Ghosh } 10722302aa1bSDebojyoti Ghosh SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",gleetype); 10732302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10742302aa1bSDebojyoti Ghosh } 10752302aa1bSDebojyoti Ghosh 10762302aa1bSDebojyoti Ghosh static PetscErrorCode TSGetStages_GLEE(TS ts,PetscInt *ns,Vec **Y) 10772302aa1bSDebojyoti Ghosh { 10782302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 10792302aa1bSDebojyoti Ghosh 10802302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10812302aa1bSDebojyoti Ghosh *ns = glee->tableau->s; 1082d5509560SEmil Constantinescu if(Y) *Y = glee->YStage; 10832302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 10842302aa1bSDebojyoti Ghosh } 10852302aa1bSDebojyoti Ghosh 1086b2bf4f3aSDebojyoti Ghosh PetscErrorCode TSGetSolutionComponents_GLEE(TS ts,PetscInt *n,Vec *Y) 10872302aa1bSDebojyoti Ghosh { 10882302aa1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 10892302aa1bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 10906e2e232bSDebojyoti Ghosh PetscErrorCode ierr; 10912302aa1bSDebojyoti Ghosh 10922302aa1bSDebojyoti Ghosh PetscFunctionBegin; 10934cdd57e5SDebojyoti Ghosh if (!Y) *n = tab->r; 10942302aa1bSDebojyoti Ghosh else { 10954cdd57e5SDebojyoti Ghosh if ((*n >= 0) && (*n < tab->r)) { 10964cdd57e5SDebojyoti Ghosh ierr = VecCopy(glee->Y[*n],*Y); CHKERRQ(ierr); 10979657682dSDebojyoti Ghosh } else SETERRQ3(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_OUTOFRANGE,"Second argument (%d) out of range[%d,%d].",*n,0,tab->r-1); 10982302aa1bSDebojyoti Ghosh } 10992302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 11002302aa1bSDebojyoti Ghosh } 11012302aa1bSDebojyoti Ghosh 11024cdd57e5SDebojyoti Ghosh PetscErrorCode TSGetAuxSolution_GLEE(TS ts,Vec *X) 11034cdd57e5SDebojyoti Ghosh { 11044cdd57e5SDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 11054cdd57e5SDebojyoti Ghosh GLEETableau tab = glee->tableau; 11064cdd57e5SDebojyoti Ghosh PetscReal *F = tab->Fembed; 11074cdd57e5SDebojyoti Ghosh PetscInt r = tab->r; 11084cdd57e5SDebojyoti Ghosh Vec *Y = glee->Y; 1109ec0e3ee2SEmil Constantinescu PetscScalar *wr = glee->rwork; 1110ec0e3ee2SEmil Constantinescu PetscInt i; 11114cdd57e5SDebojyoti Ghosh PetscErrorCode ierr; 11124cdd57e5SDebojyoti Ghosh 11134cdd57e5SDebojyoti Ghosh PetscFunctionBegin; 11144cdd57e5SDebojyoti Ghosh ierr = VecZeroEntries(*X);CHKERRQ(ierr); 1115ec0e3ee2SEmil Constantinescu for (i=0; i<r; i++) wr[i] = F[i]; 1116ec0e3ee2SEmil Constantinescu ierr = VecMAXPY((*X),r,wr,Y);CHKERRQ(ierr); 11174cdd57e5SDebojyoti Ghosh PetscFunctionReturn(0); 11184cdd57e5SDebojyoti Ghosh } 11194cdd57e5SDebojyoti Ghosh 11200a01e1b2SEmil Constantinescu PetscErrorCode TSGetTimeError_GLEE(TS ts,PetscInt n,Vec *X) 11214cdd57e5SDebojyoti Ghosh { 11224cdd57e5SDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 11234cdd57e5SDebojyoti Ghosh GLEETableau tab = glee->tableau; 11244cdd57e5SDebojyoti Ghosh PetscReal *F = tab->Ferror; 11254cdd57e5SDebojyoti Ghosh PetscInt r = tab->r; 11264cdd57e5SDebojyoti Ghosh Vec *Y = glee->Y; 1127ec0e3ee2SEmil Constantinescu PetscScalar *wr = glee->rwork; 1128ec0e3ee2SEmil Constantinescu PetscInt i; 11294cdd57e5SDebojyoti Ghosh PetscErrorCode ierr; 11304cdd57e5SDebojyoti Ghosh 11314cdd57e5SDebojyoti Ghosh PetscFunctionBegin; 11324cdd57e5SDebojyoti Ghosh ierr = VecZeroEntries(*X);CHKERRQ(ierr); 1133657c1e31SEmil Constantinescu if(n==0){ 1134ec0e3ee2SEmil Constantinescu for (i=0; i<r; i++) wr[i] = F[i]; 1135ec0e3ee2SEmil Constantinescu ierr = VecMAXPY((*X),r,wr,Y);CHKERRQ(ierr); 11360a01e1b2SEmil Constantinescu } else if(n==-1) { 1137657c1e31SEmil Constantinescu *X=glee->yGErr; 11380a01e1b2SEmil Constantinescu } 11394cdd57e5SDebojyoti Ghosh PetscFunctionReturn(0); 11404cdd57e5SDebojyoti Ghosh } 11414cdd57e5SDebojyoti Ghosh 114257df6a1bSDebojyoti Ghosh PetscErrorCode TSSetTimeError_GLEE(TS ts,Vec X) 114357df6a1bSDebojyoti Ghosh { 114457df6a1bSDebojyoti Ghosh TS_GLEE *glee = (TS_GLEE*)ts->data; 114557df6a1bSDebojyoti Ghosh GLEETableau tab = glee->tableau; 114657df6a1bSDebojyoti Ghosh PetscReal *S = tab->Serror; 114757df6a1bSDebojyoti Ghosh PetscInt r = tab->r,i; 114857df6a1bSDebojyoti Ghosh Vec *Y = glee->Y; 114957df6a1bSDebojyoti Ghosh PetscErrorCode ierr; 115057df6a1bSDebojyoti Ghosh 115157df6a1bSDebojyoti Ghosh PetscFunctionBegin; 11529657682dSDebojyoti Ghosh if (r != 2) SETERRQ2(PetscObjectComm((PetscObject)ts),PETSC_ERR_SUP,"TSSetTimeError_GLEE not supported for '%s' with r=%D.",tab->name,tab->r); 115357df6a1bSDebojyoti Ghosh for (i=1; i<r; i++) { 115457df6a1bSDebojyoti Ghosh ierr = VecCopy(ts->vec_sol,Y[i]); CHKERRQ(ierr); 115557df6a1bSDebojyoti Ghosh ierr = VecAXPBY(Y[i],S[0],S[1],X); CHKERRQ(ierr); 1156642ca4e8SEmil Constantinescu ierr = VecCopy(X,glee->yGErr); CHKERRQ(ierr); 115757df6a1bSDebojyoti Ghosh } 115857df6a1bSDebojyoti Ghosh PetscFunctionReturn(0); 115957df6a1bSDebojyoti Ghosh } 116057df6a1bSDebojyoti Ghosh 11612302aa1bSDebojyoti Ghosh /* ------------------------------------------------------------ */ 11622302aa1bSDebojyoti Ghosh /*MC 11632302aa1bSDebojyoti Ghosh TSGLEE - ODE and DAE solver using General Linear with Error Estimation schemes 11642302aa1bSDebojyoti Ghosh 11652302aa1bSDebojyoti Ghosh The user should provide the right hand side of the equation 11662302aa1bSDebojyoti Ghosh using TSSetRHSFunction(). 11672302aa1bSDebojyoti Ghosh 11682302aa1bSDebojyoti Ghosh Notes: 11692302aa1bSDebojyoti Ghosh The default is TSGLEE35, it can be changed with TSGLEESetType() or -ts_glee_type 11702302aa1bSDebojyoti Ghosh 11712302aa1bSDebojyoti Ghosh Level: beginner 11722302aa1bSDebojyoti Ghosh 11732302aa1bSDebojyoti Ghosh .seealso: TSCreate(), TS, TSSetType(), TSGLEESetType(), TSGLEEGetType(), 11742302aa1bSDebojyoti Ghosh TSGLEE23, TTSGLEE24, TSGLEE35, TSGLEE25I, TSGLEEEXRK2A, 11752302aa1bSDebojyoti Ghosh TSGLEERK32G1, TSGLEERK285EX, TSGLEEType, TSGLEERegister() 11762302aa1bSDebojyoti Ghosh 11772302aa1bSDebojyoti Ghosh M*/ 11782302aa1bSDebojyoti Ghosh PETSC_EXTERN PetscErrorCode TSCreate_GLEE(TS ts) 11792302aa1bSDebojyoti Ghosh { 11802302aa1bSDebojyoti Ghosh TS_GLEE *th; 11812302aa1bSDebojyoti Ghosh PetscErrorCode ierr; 11822302aa1bSDebojyoti Ghosh 11832302aa1bSDebojyoti Ghosh PetscFunctionBegin; 11842302aa1bSDebojyoti Ghosh #if !defined(PETSC_USE_DYNAMIC_LIBRARIES) 11852302aa1bSDebojyoti Ghosh ierr = TSGLEEInitializePackage();CHKERRQ(ierr); 11862302aa1bSDebojyoti Ghosh #endif 11872302aa1bSDebojyoti Ghosh 11882302aa1bSDebojyoti Ghosh ts->ops->reset = TSReset_GLEE; 11892302aa1bSDebojyoti Ghosh ts->ops->destroy = TSDestroy_GLEE; 11902302aa1bSDebojyoti Ghosh ts->ops->view = TSView_GLEE; 11912302aa1bSDebojyoti Ghosh ts->ops->load = TSLoad_GLEE; 11922302aa1bSDebojyoti Ghosh ts->ops->setup = TSSetUp_GLEE; 11932302aa1bSDebojyoti Ghosh ts->ops->step = TSStep_GLEE; 11942302aa1bSDebojyoti Ghosh ts->ops->interpolate = TSInterpolate_GLEE; 11952302aa1bSDebojyoti Ghosh ts->ops->evaluatestep = TSEvaluateStep_GLEE; 11962302aa1bSDebojyoti Ghosh ts->ops->setfromoptions = TSSetFromOptions_GLEE; 11972302aa1bSDebojyoti Ghosh ts->ops->getstages = TSGetStages_GLEE; 11982302aa1bSDebojyoti Ghosh ts->ops->snesfunction = SNESTSFormFunction_GLEE; 11992302aa1bSDebojyoti Ghosh ts->ops->snesjacobian = SNESTSFormJacobian_GLEE; 1200b2bf4f3aSDebojyoti Ghosh ts->ops->getsolutioncomponents = TSGetSolutionComponents_GLEE; 12014cdd57e5SDebojyoti Ghosh ts->ops->getauxsolution = TSGetAuxSolution_GLEE; 12024cdd57e5SDebojyoti Ghosh ts->ops->gettimeerror = TSGetTimeError_GLEE; 120357df6a1bSDebojyoti Ghosh ts->ops->settimeerror = TSSetTimeError_GLEE; 12042302aa1bSDebojyoti Ghosh ts->ops->startingmethod = TSStartingMethod_GLEE; 1205b80d5313SLisandro Dalcin ts->default_adapt_type = TSADAPTGLEE; 12062302aa1bSDebojyoti Ghosh 1207*efd4aadfSBarry Smith ts->usessnes = PETSC_TRUE; 1208*efd4aadfSBarry Smith 12092302aa1bSDebojyoti Ghosh ierr = PetscNewLog(ts,&th);CHKERRQ(ierr); 12102302aa1bSDebojyoti Ghosh ts->data = (void*)th; 12112302aa1bSDebojyoti Ghosh 12122302aa1bSDebojyoti Ghosh ierr = PetscObjectComposeFunction((PetscObject)ts,"TSGLEEGetType_C",TSGLEEGetType_GLEE);CHKERRQ(ierr); 12132302aa1bSDebojyoti Ghosh ierr = PetscObjectComposeFunction((PetscObject)ts,"TSGLEESetType_C",TSGLEESetType_GLEE);CHKERRQ(ierr); 12142302aa1bSDebojyoti Ghosh PetscFunctionReturn(0); 12152302aa1bSDebojyoti Ghosh } 1216