1d249a78fSBarry Smith /* 2d249a78fSBarry Smith Provides a PETSc interface to RADAU5 solver. 3d249a78fSBarry Smith 4d249a78fSBarry Smith */ 5d249a78fSBarry Smith #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 6d249a78fSBarry Smith 7d249a78fSBarry Smith typedef struct { 86ffeb343SBarry Smith Vec work, workf; 9d249a78fSBarry Smith } TS_Radau5; 10d249a78fSBarry Smith 119371c9d4SSatish Balay void FVPOL(int *N, double *X, double *Y, double *F, double *RPAR, void *IPAR) { 126ffeb343SBarry Smith TS ts = (TS)IPAR; 136ffeb343SBarry Smith TS_Radau5 *cvode = (TS_Radau5 *)ts->data; 146ffeb343SBarry Smith DM dm; 156ffeb343SBarry Smith DMTS tsdm; 166ffeb343SBarry Smith TSIFunction ifunction; 176ffeb343SBarry Smith 189566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecPlaceArray(cvode->work, Y)); 199566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecPlaceArray(cvode->workf, F)); 206ffeb343SBarry Smith 216ffeb343SBarry Smith /* Now compute the right hand side function, via IFunction unless only the more efficient RHSFunction is set */ 229566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, TSGetDM(ts, &dm)); 239566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, DMGetDMTS(dm, &tsdm)); 249566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, DMTSGetIFunction(dm, &ifunction, NULL)); 256ffeb343SBarry Smith if (!ifunction) { 269566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, TSComputeRHSFunction(ts, *X, cvode->work, cvode->workf)); 27e68ccae8SBarry Smith } else { /* If rhsfunction is also set, this computes both parts and scale them to the right hand side */ 286ffeb343SBarry Smith Vec yydot; 296ffeb343SBarry Smith 309566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecDuplicate(cvode->work, &yydot)); 319566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecZeroEntries(yydot)); 329566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, TSComputeIFunction(ts, *X, cvode->work, yydot, cvode->workf, PETSC_FALSE)); 339566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecScale(cvode->workf, -1.)); 349566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecDestroy(&yydot)); 356ffeb343SBarry Smith } 366ffeb343SBarry Smith 379566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecResetArray(cvode->work)); 389566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecResetArray(cvode->workf)); 396ffeb343SBarry Smith } 406ffeb343SBarry Smith 419371c9d4SSatish Balay void JVPOL(PetscInt *N, PetscScalar *X, PetscScalar *Y, PetscScalar *DFY, int *LDFY, PetscScalar *RPAR, void *IPAR) { 428acf3572SBarry Smith TS ts = (TS)IPAR; 438acf3572SBarry Smith TS_Radau5 *cvode = (TS_Radau5 *)ts->data; 448acf3572SBarry Smith Vec yydot; 458acf3572SBarry Smith Mat mat; 468acf3572SBarry Smith PetscInt n; 47d249a78fSBarry Smith 489566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecPlaceArray(cvode->work, Y)); 499566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecDuplicate(cvode->work, &yydot)); 509566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecGetSize(yydot, &n)); 519566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatCreateSeqDense(PETSC_COMM_SELF, n, n, DFY, &mat)); 529566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecZeroEntries(yydot)); 539566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, TSComputeIJacobian(ts, *X, cvode->work, yydot, 0, mat, mat, PETSC_FALSE)); 549566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatScale(mat, -1.0)); 559566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, MatDestroy(&mat)); 569566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecDestroy(&yydot)); 579566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecResetArray(cvode->work)); 588acf3572SBarry Smith } 598acf3572SBarry Smith 609371c9d4SSatish Balay void SOLOUT(int *NR, double *XOLD, double *X, double *Y, double *CONT, double *LRC, int *N, double *RPAR, void *IPAR, int *IRTRN) { 61d249a78fSBarry Smith TS ts = (TS)IPAR; 62d249a78fSBarry Smith TS_Radau5 *cvode = (TS_Radau5 *)ts->data; 63d249a78fSBarry Smith 649566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecPlaceArray(cvode->work, Y)); 65d249a78fSBarry Smith ts->time_step = *X - *XOLD; 669566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, TSMonitor(ts, *NR - 1, *X, cvode->work)); 679566063dSJacob Faibussowitsch PetscCallAbort(PETSC_COMM_SELF, VecResetArray(cvode->work)); 68d249a78fSBarry Smith } 69d249a78fSBarry Smith 70d249a78fSBarry Smith void radau5_(int *, void *, double *, double *, double *, double *, double *, double *, int *, void *, int *, int *, int *, void *, int *, int *, int *, void *, int *, double *, int *, int *, int *, double *, void *, int *); 71d249a78fSBarry Smith 729371c9d4SSatish Balay PetscErrorCode TSSolve_Radau5(TS ts) { 73d249a78fSBarry Smith TS_Radau5 *cvode = (TS_Radau5 *)ts->data; 74d249a78fSBarry Smith PetscScalar *Y, *WORK, X, XEND, RTOL, ATOL, H, RPAR; 75d249a78fSBarry Smith PetscInt ND, *IWORK, LWORK, LIWORK, MUJAC, MLMAS, MUMAS, IDID, ITOL; 76d249a78fSBarry Smith int IJAC, MLJAC, IMAS, IOUT; 77d249a78fSBarry Smith 78d249a78fSBarry Smith PetscFunctionBegin; 799566063dSJacob Faibussowitsch PetscCall(VecGetArray(ts->vec_sol, &Y)); 809566063dSJacob Faibussowitsch PetscCall(VecGetSize(ts->vec_sol, &ND)); 819566063dSJacob Faibussowitsch PetscCall(VecCreateSeqWithArray(PETSC_COMM_SELF, 1, ND, NULL, &cvode->work)); 829566063dSJacob Faibussowitsch PetscCall(VecCreateSeqWithArray(PETSC_COMM_SELF, 1, ND, NULL, &cvode->workf)); 83d249a78fSBarry Smith 84d249a78fSBarry Smith LWORK = 4 * ND * ND + 12 * ND + 20; 85d249a78fSBarry Smith LIWORK = 3 * ND + 20; 86d249a78fSBarry Smith 879566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(LWORK, &WORK, LIWORK, &IWORK)); 88d249a78fSBarry Smith 89d249a78fSBarry Smith /* C --- PARAMETER IN THE DIFFERENTIAL EQUATION */ 90d249a78fSBarry Smith RPAR = 1.0e-6; 91d249a78fSBarry Smith /* C --- COMPUTE THE JACOBIAN ANALYTICALLY */ 92d249a78fSBarry Smith IJAC = 1; 93d249a78fSBarry Smith /* C --- JACOBIAN IS A FULL MATRIX */ 94d249a78fSBarry Smith MLJAC = ND; 95d249a78fSBarry Smith /* C --- DIFFERENTIAL EQUATION IS IN EXPLICIT FORM*/ 96d249a78fSBarry Smith IMAS = 0; 97d249a78fSBarry Smith /* C --- OUTPUT ROUTINE IS USED DURING INTEGRATION*/ 98d249a78fSBarry Smith IOUT = 1; 99d249a78fSBarry Smith /* C --- INITIAL VALUES*/ 100d249a78fSBarry Smith X = ts->ptime; 101d249a78fSBarry Smith /* C --- ENDPOINT OF INTEGRATION */ 102d249a78fSBarry Smith XEND = ts->max_time; 103d249a78fSBarry Smith /* C --- REQUIRED TOLERANCE */ 1046ffeb343SBarry Smith RTOL = ts->rtol; 1056ffeb343SBarry Smith ATOL = ts->atol; 106d249a78fSBarry Smith ITOL = 0; 107d249a78fSBarry Smith /* C --- INITIAL STEP SIZE */ 10869a506b1SBarry Smith H = ts->time_step; 109d249a78fSBarry Smith 110e68ccae8SBarry Smith /* output MUJAC MLMAS IDID; currently all ignored */ 111d249a78fSBarry Smith 112d249a78fSBarry Smith radau5_(&ND, FVPOL, &X, Y, &XEND, &H, &RTOL, &ATOL, &ITOL, JVPOL, &IJAC, &MLJAC, &MUJAC, FVPOL, &IMAS, &MLMAS, &MUMAS, SOLOUT, &IOUT, WORK, &LWORK, IWORK, &LIWORK, &RPAR, (void *)ts, &IDID); 113d249a78fSBarry Smith 1149566063dSJacob Faibussowitsch PetscCall(PetscFree2(WORK, IWORK)); 115d249a78fSBarry Smith PetscFunctionReturn(0); 116d249a78fSBarry Smith } 117d249a78fSBarry Smith 1189371c9d4SSatish Balay PetscErrorCode TSDestroy_Radau5(TS ts) { 119d249a78fSBarry Smith TS_Radau5 *cvode = (TS_Radau5 *)ts->data; 120d249a78fSBarry Smith 121d249a78fSBarry Smith PetscFunctionBegin; 1229566063dSJacob Faibussowitsch PetscCall(VecDestroy(&cvode->work)); 1239566063dSJacob Faibussowitsch PetscCall(VecDestroy(&cvode->workf)); 1249566063dSJacob Faibussowitsch PetscCall(PetscFree(ts->data)); 125d249a78fSBarry Smith PetscFunctionReturn(0); 126d249a78fSBarry Smith } 127d249a78fSBarry Smith 128d249a78fSBarry Smith /*MC 129d249a78fSBarry Smith TSRADAU5 - ODE solver using the RADAU5 package 130d249a78fSBarry Smith 13195452b02SPatrick Sanan Notes: 13295452b02SPatrick Sanan This uses its own nonlinear solver and dense matrix direct solver so PETSc SNES and KSP options do not apply. 133e68ccae8SBarry Smith Uses its own time-step adaptivity (but uses the TS rtol and atol, and initial timestep) 134e68ccae8SBarry Smith Uses its own memory for the dense matrix storage and factorization 135e68ccae8SBarry Smith Can only handle ODEs of the form \cdot{u} = -F(t,u) + G(t,u) 136d249a78fSBarry Smith 137d249a78fSBarry Smith Level: beginner 138d249a78fSBarry Smith 139db781477SPatrick Sanan .seealso: `TSCreate()`, `TS`, `TSSetType()` 140d249a78fSBarry Smith 141d249a78fSBarry Smith M*/ 1429371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode TSCreate_Radau5(TS ts) { 143d249a78fSBarry Smith TS_Radau5 *cvode; 144d249a78fSBarry Smith 145d249a78fSBarry Smith PetscFunctionBegin; 146d249a78fSBarry Smith ts->ops->destroy = TSDestroy_Radau5; 147d249a78fSBarry Smith ts->ops->solve = TSSolve_Radau5; 148d249a78fSBarry Smith ts->default_adapt_type = TSADAPTNONE; 149d249a78fSBarry Smith 150*4dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&cvode)); 151d249a78fSBarry Smith ts->data = (void *)cvode; 152d249a78fSBarry Smith PetscFunctionReturn(0); 153d249a78fSBarry Smith } 154