14b84eec9SHong Zhang /* 2f944a40eSHong Zhang Code for time stepping with the Multirate Partitioned Runge-Kutta method 34b84eec9SHong Zhang 44b84eec9SHong Zhang Notes: 54b84eec9SHong Zhang 1) The general system is written as 6f944a40eSHong Zhang Udot = F(t,U) 7f944a40eSHong Zhang if one does not split the RHS function, but gives the indexes for both slow and fast components; 84b84eec9SHong Zhang 2) The general system is written as 94b84eec9SHong Zhang Usdot = Fs(t,Us,Uf) 10f944a40eSHong Zhang Ufdot = Ff(t,Us,Uf) 11f944a40eSHong Zhang for component-wise partitioned system, 12f944a40eSHong Zhang users should split the RHS function themselves and also provide the indexes for both slow and fast components. 1319c2959aSHong Zhang 3) To correct The confusing terminology in the paper, we use 'slow method', 'slow buffer method' and 'fast method' to denote the methods applied to 'slow region', 'slow buffer region' and 'fast region' respectively. The 'slow method' in the original paper actually means the 'slow buffer method'. 1419c2959aSHong Zhang 4) Why does the buffer region have to be inside the slow region? The buffer region is treated with a slow method essentially. Applying the slow method to a region with a fast characteristic time scale is apparently not a good choice. 1519c2959aSHong Zhang 1619c2959aSHong Zhang Reference: 1719c2959aSHong Zhang Emil M. Constantinescu, Adrian Sandu, Multirate Timestepping Methods for Hyperbolic Conservation Laws, Journal of Scientific Computing 2007 184b84eec9SHong Zhang */ 194b84eec9SHong Zhang 204b84eec9SHong Zhang #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 214b84eec9SHong Zhang #include <petscdm.h> 224b84eec9SHong Zhang 2319c2959aSHong Zhang static TSMPRKType TSMPRKDefault = TSMPRK2A22; 244b84eec9SHong Zhang static PetscBool TSMPRKRegisterAllCalled; 254b84eec9SHong Zhang static PetscBool TSMPRKPackageInitialized; 264b84eec9SHong Zhang 274b84eec9SHong Zhang typedef struct _MPRKTableau *MPRKTableau; 284b84eec9SHong Zhang struct _MPRKTableau { 294b84eec9SHong Zhang char *name; 304b84eec9SHong Zhang PetscInt order; /* Classical approximation order of the method i */ 3179bc8a77SHong Zhang PetscInt sbase; /* Number of stages in the base method*/ 324b84eec9SHong Zhang PetscInt s; /* Number of stages */ 3319c2959aSHong Zhang PetscInt np; /* Number of partitions */ 344b84eec9SHong Zhang PetscReal *Af,*bf,*cf; /* Tableau for fast components */ 3519c2959aSHong Zhang PetscReal *Amb,*bmb,*cmb; /* Tableau for medium components */ 3619c2959aSHong Zhang PetscInt *rmb; /* Array of flags for repeated stages in medium method */ 3719c2959aSHong Zhang PetscReal *Asb,*bsb,*csb; /* Tableau for slow components */ 3819c2959aSHong Zhang PetscInt *rsb; /* Array of flags for repeated staged in slow method*/ 394b84eec9SHong Zhang }; 404b84eec9SHong Zhang typedef struct _MPRKTableauLink *MPRKTableauLink; 414b84eec9SHong Zhang struct _MPRKTableauLink { 424b84eec9SHong Zhang struct _MPRKTableau tab; 434b84eec9SHong Zhang MPRKTableauLink next; 444b84eec9SHong Zhang }; 454b84eec9SHong Zhang static MPRKTableauLink MPRKTableauList; 464b84eec9SHong Zhang 474b84eec9SHong Zhang typedef struct { 484b84eec9SHong Zhang MPRKTableau tableau; 494b84eec9SHong Zhang Vec *Y; /* States computed during the step */ 507c0df07dSHong Zhang Vec *YdotRHS; 514b84eec9SHong Zhang Vec *YdotRHS_slow; /* Function evaluations by slow tableau for slow components */ 5219c2959aSHong Zhang Vec *YdotRHS_slowbuffer; /* Function evaluations by slow tableau for slow components */ 5319c2959aSHong Zhang Vec *YdotRHS_medium; /* Function evaluations by slow tableau for slow components */ 5419c2959aSHong Zhang Vec *YdotRHS_mediumbuffer; /* Function evaluations by slow tableau for slow components */ 5519c2959aSHong Zhang Vec *YdotRHS_fast; /* Function evaluations by fast tableau for fast components */ 564b84eec9SHong Zhang PetscScalar *work_slow; /* Scalar work_slow by slow tableau */ 5719c2959aSHong Zhang PetscScalar *work_slowbuffer; /* Scalar work_slow by slow tableau */ 5819c2959aSHong Zhang PetscScalar *work_medium; /* Scalar work_slow by medium tableau */ 5919c2959aSHong Zhang PetscScalar *work_mediumbuffer; /* Scalar work_slow by medium tableau */ 6019c2959aSHong Zhang PetscScalar *work_fast; /* Scalar work_fast by fast tableau */ 614b84eec9SHong Zhang PetscReal stage_time; 624b84eec9SHong Zhang TSStepStatus status; 634b84eec9SHong Zhang PetscReal ptime; 644b84eec9SHong Zhang PetscReal time_step; 6519c2959aSHong Zhang IS is_slow,is_slowbuffer,is_medium,is_mediumbuffer,is_fast; 6619c2959aSHong Zhang TS subts_slow,subts_slowbuffer,subts_medium,subts_mediumbuffer,subts_fast; 674b84eec9SHong Zhang } TS_MPRK; 684b84eec9SHong Zhang 6919c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau2(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[]) 7019c2959aSHong Zhang { 7119c2959aSHong Zhang PetscInt i,j,k,l; 7219c2959aSHong Zhang 7319c2959aSHong Zhang PetscFunctionBegin; 7419c2959aSHong Zhang for (k=0; k<ratio; k++) { 7519c2959aSHong Zhang /* diagonal blocks */ 7619c2959aSHong Zhang for (i=0; i<s; i++) 7719c2959aSHong Zhang for (j=0; j<s; j++) { 7819c2959aSHong Zhang A1[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j]; 7919c2959aSHong Zhang A2[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j]/ratio; 8019c2959aSHong Zhang } 8119c2959aSHong Zhang /* off diagonal blocks */ 8219c2959aSHong Zhang for (l=0; l<k; l++) 8319c2959aSHong Zhang for (i=0; i<s; i++) 8419c2959aSHong Zhang for (j=0; j<s; j++) 8519c2959aSHong Zhang A2[(k*s+i)*ratio*s+l*s+j] = bbase[j]/ratio; 8619c2959aSHong Zhang for (j=0; j<s; j++) { 8719c2959aSHong Zhang b1[k*s+j] = bbase[j]/ratio; 8819c2959aSHong Zhang b2[k*s+j] = bbase[j]/ratio; 8919c2959aSHong Zhang } 9019c2959aSHong Zhang } 9119c2959aSHong Zhang PetscFunctionReturn(0); 9219c2959aSHong Zhang } 9319c2959aSHong Zhang 9419c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau3(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[],PetscReal A3[],PetscReal b3[]) 9519c2959aSHong Zhang { 9619c2959aSHong Zhang PetscInt i,j,k,l,m,n; 9719c2959aSHong Zhang 9819c2959aSHong Zhang PetscFunctionBegin; 9919c2959aSHong Zhang for (k=0; k<ratio; k++) { /* diagonal blocks of size ratio*s by ratio*s */ 10019c2959aSHong Zhang for (l=0; l<ratio; l++) /* diagonal sub-blocks of size s by s */ 10119c2959aSHong Zhang for (i=0; i<s; i++) 10219c2959aSHong Zhang for (j=0; j<s; j++) { 10319c2959aSHong Zhang A1[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]; 10419c2959aSHong Zhang A2[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio; 10519c2959aSHong Zhang A3[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio/ratio; 10619c2959aSHong Zhang } 10719c2959aSHong Zhang for (l=0; l<k; l++) /* off-diagonal blocks of size ratio*s by ratio*s */ 10819c2959aSHong Zhang for (m=0; m<ratio; m++) 10919c2959aSHong Zhang for (n=0; n<ratio; n++) 11019c2959aSHong Zhang for (i=0; i<s; i++) 11119c2959aSHong Zhang for (j=0; j<s; j++) { 11219c2959aSHong Zhang A2[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio; 11319c2959aSHong Zhang A3[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio; 11419c2959aSHong Zhang } 11519c2959aSHong Zhang for (m=0; m<ratio; m++) 11619c2959aSHong Zhang for (n=0; n<m; n++) /* off-diagonal sub-blocks of size s by s in the diagonal blocks */ 11719c2959aSHong Zhang for (i=0; i<s; i++) 11819c2959aSHong Zhang for (j=0; j<s; j++) 11919c2959aSHong Zhang A3[((k*ratio+m)*s+i)*ratio*ratio*s+(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12019c2959aSHong Zhang for (n=0; n<ratio; n++) 12119c2959aSHong Zhang for (j=0; j<s; j++) { 12219c2959aSHong Zhang b1[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12319c2959aSHong Zhang b2[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12419c2959aSHong Zhang b3[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12519c2959aSHong Zhang } 12619c2959aSHong Zhang } 12719c2959aSHong Zhang PetscFunctionReturn(0); 12819c2959aSHong Zhang } 12919c2959aSHong Zhang 1304b84eec9SHong Zhang /*MC 131f944a40eSHong Zhang TSMPRK2A22 - Second Order Multirate Partitioned Runge Kutta scheme based on RK2A. 1324b84eec9SHong Zhang 13319c2959aSHong Zhang This method has four stages for slow and fast parts. The refinement factor of the stepsize is 2. 13419c2959aSHong Zhang r = 2, np = 2 135*147403d9SBarry Smith 1364b84eec9SHong Zhang Options database: 137*147403d9SBarry Smith . -ts_mprk_type 2a22 - select this scheme 1384b84eec9SHong Zhang 1394b84eec9SHong Zhang Level: advanced 1404b84eec9SHong Zhang 1414b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 1424b84eec9SHong Zhang M*/ 1434b84eec9SHong Zhang /*MC 144f944a40eSHong Zhang TSMPRK2A23 - Second Order Multirate Partitioned Runge-Kutta scheme based on RK2A. 14519c2959aSHong Zhang 14619c2959aSHong Zhang This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 2. 14719c2959aSHong Zhang r = 2, np = 3 148*147403d9SBarry Smith 14919c2959aSHong Zhang Options database: 150*147403d9SBarry Smith . -ts_mprk_type 2a23 - select this scheme 15119c2959aSHong Zhang 15219c2959aSHong Zhang Level: advanced 15319c2959aSHong Zhang 15419c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 15519c2959aSHong Zhang M*/ 15619c2959aSHong Zhang /*MC 157f944a40eSHong Zhang TSMPRK2A32 - Second Order Multirate Partitioned Runge-Kutta scheme based on RK2A. 15819c2959aSHong Zhang 15919c2959aSHong Zhang This method has four stages for slow and fast parts. The refinement factor of the stepsize is 3. 16019c2959aSHong Zhang r = 3, np = 2 161*147403d9SBarry Smith 16219c2959aSHong Zhang Options database: 163*147403d9SBarry Smith . -ts_mprk_type 2a32 - select this scheme 16419c2959aSHong Zhang 16519c2959aSHong Zhang Level: advanced 16619c2959aSHong Zhang 16719c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 16819c2959aSHong Zhang M*/ 16919c2959aSHong Zhang /*MC 170f944a40eSHong Zhang TSMPRK2A33 - Second Order Multirate Partitioned Runge-Kutta scheme based on RK2A. 17119c2959aSHong Zhang 17219c2959aSHong Zhang This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 3. 17319c2959aSHong Zhang r = 3, np = 3 174*147403d9SBarry Smith 17519c2959aSHong Zhang Options database: 176*147403d9SBarry Smith . -ts_mprk_type 2a33- select this scheme 17719c2959aSHong Zhang 17819c2959aSHong Zhang Level: advanced 17919c2959aSHong Zhang 18019c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 18119c2959aSHong Zhang M*/ 18219c2959aSHong Zhang /*MC 183f944a40eSHong Zhang TSMPRK3P2M - Third Order Multirate Partitioned Runge-Kutta scheme. 1844b84eec9SHong Zhang 1854b84eec9SHong Zhang This method has eight stages for both slow and fast parts. 1864b84eec9SHong Zhang 1874b84eec9SHong Zhang Options database: 188*147403d9SBarry Smith . -ts_mprk_type pm3 - select this scheme 1894b84eec9SHong Zhang 1904b84eec9SHong Zhang Level: advanced 1914b84eec9SHong Zhang 1924b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 1934b84eec9SHong Zhang M*/ 1944b84eec9SHong Zhang /*MC 195f944a40eSHong Zhang TSMPRKP2 - Second Order Multirate Partitioned Runge-Kutta scheme. 1964b84eec9SHong Zhang 1974b84eec9SHong Zhang This method has five stages for both slow and fast parts. 1984b84eec9SHong Zhang 1994b84eec9SHong Zhang Options database: 200*147403d9SBarry Smith . -ts_mprk_type p2 - select this scheme 2014b84eec9SHong Zhang 2024b84eec9SHong Zhang Level: advanced 2034b84eec9SHong Zhang 2044b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 2054b84eec9SHong Zhang M*/ 2064b84eec9SHong Zhang /*MC 207f944a40eSHong Zhang TSMPRKP3 - Third Order Multirate Partitioned Runge-Kutta scheme. 2084b84eec9SHong Zhang 2094b84eec9SHong Zhang This method has ten stages for both slow and fast parts. 2104b84eec9SHong Zhang 2114b84eec9SHong Zhang Options database: 212*147403d9SBarry Smith . -ts_mprk_type p3 - select this scheme 2134b84eec9SHong Zhang 2144b84eec9SHong Zhang Level: advanced 2154b84eec9SHong Zhang 2164b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 2174b84eec9SHong Zhang M*/ 2184b84eec9SHong Zhang 2194b84eec9SHong Zhang /*@C 2204b84eec9SHong Zhang TSMPRKRegisterAll - Registers all of the Partirioned Runge-Kutta explicit methods in TSMPRK 2214b84eec9SHong Zhang 2224b84eec9SHong Zhang Not Collective, but should be called by all processes which will need the schemes to be registered 2234b84eec9SHong Zhang 2244b84eec9SHong Zhang Level: advanced 2254b84eec9SHong Zhang 2264b84eec9SHong Zhang .seealso: TSMPRKRegisterDestroy() 2274b84eec9SHong Zhang @*/ 2284b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterAll(void) 2294b84eec9SHong Zhang { 2304b84eec9SHong Zhang PetscErrorCode ierr; 2314b84eec9SHong Zhang 2324b84eec9SHong Zhang PetscFunctionBegin; 2334b84eec9SHong Zhang if (TSMPRKRegisterAllCalled) PetscFunctionReturn(0); 2344b84eec9SHong Zhang TSMPRKRegisterAllCalled = PETSC_TRUE; 2354b84eec9SHong Zhang 2364b84eec9SHong Zhang #define RC PetscRealConstant 2374b84eec9SHong Zhang { 2384b84eec9SHong Zhang const PetscReal 23919c2959aSHong Zhang Abase[2][2] = {{0,0}, 24019c2959aSHong Zhang {RC(1.0),0}}, 24119c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 24219c2959aSHong Zhang PetscReal 24319c2959aSHong Zhang Asb[4][4] = {{0}},Af[4][4] = {{0}},bsb[4] = {0},bf[4] = {0}; 24419c2959aSHong Zhang PetscInt 24519c2959aSHong Zhang rsb[4] = {0,0,1,2}; 24619c2959aSHong Zhang ierr = TSMPRKGenerateTableau2(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr); 24779bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A22,2,2,2,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 2484b84eec9SHong Zhang } 24919c2959aSHong Zhang { 25019c2959aSHong Zhang const PetscReal 25119c2959aSHong Zhang Abase[2][2] = {{0,0}, 25219c2959aSHong Zhang {RC(1.0),0}}, 25319c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 25419c2959aSHong Zhang PetscReal 25519c2959aSHong Zhang Asb[8][8] = {{0}},Amb[8][8] = {{0}},Af[8][8] = {{0}},bsb[8] ={0},bmb[8] = {0},bf[8] = {0}; 25619c2959aSHong Zhang PetscInt 25719c2959aSHong Zhang rsb[8] = {0,0,1,2,1,2,1,2},rmb[8] = {0,0,1,2,0,0,5,6}; 25819c2959aSHong Zhang ierr = TSMPRKGenerateTableau3(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr); 25979bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A23,2,2,2,2,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr); 26019c2959aSHong Zhang } 26119c2959aSHong Zhang { 26219c2959aSHong Zhang const PetscReal 26319c2959aSHong Zhang Abase[2][2] = {{0,0}, 26419c2959aSHong Zhang {RC(1.0),0}}, 26519c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 26619c2959aSHong Zhang PetscReal 26719c2959aSHong Zhang Asb[6][6] = {{0}},Af[6][6] = {{0}},bsb[6] = {0},bf[6] = {0}; 26819c2959aSHong Zhang PetscInt 26919c2959aSHong Zhang rsb[6] = {0,0,1,2,1,2}; 27019c2959aSHong Zhang ierr = TSMPRKGenerateTableau2(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr); 27179bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A32,2,2,3,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 27219c2959aSHong Zhang } 27319c2959aSHong Zhang { 27419c2959aSHong Zhang const PetscReal 27519c2959aSHong Zhang Abase[2][2] = {{0,0}, 27619c2959aSHong Zhang {RC(1.0),0}}, 27719c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 27819c2959aSHong Zhang PetscReal 27919c2959aSHong Zhang Asb[18][18] = {{0}},Amb[18][18] = {{0}},Af[18][18] = {{0}},bsb[18] ={0},bmb[18] = {0},bf[18] = {0}; 28019c2959aSHong Zhang PetscInt 28119c2959aSHong Zhang rsb[18] = {0,0,1,2,1,2,1,2,1,2,1,2,1,2,1,2,1,2},rmb[18] = {0,0,1,2,1,2,0,0,7,8,7,8,0,0,13,14,13,14}; 28219c2959aSHong Zhang ierr = TSMPRKGenerateTableau3(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr); 28379bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A33,2,2,3,3,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr); 28419c2959aSHong Zhang } 28519c2959aSHong Zhang /* 28619c2959aSHong Zhang PetscReal 28719c2959aSHong Zhang Asb[8][8] = {{Abase[0][0],Abase[0][1],0,0,0,0,0,0}, 28819c2959aSHong Zhang {Abase[1][0],Abase[1][1],0,0,0,0,0,0}, 28919c2959aSHong Zhang {0,0,Abase[0][0],Abase[0][1],0,0,0,0}, 29019c2959aSHong Zhang {0,0,Abase[1][0],Abase[1][1],0,0,0,0}, 29119c2959aSHong Zhang {0,0,0,0,Abase[0][0],Abase[0][1],0,0}, 29219c2959aSHong Zhang {0,0,0,0,Abase[1][0],Abase[1][1],0,0}, 29319c2959aSHong Zhang {0,0,0,0,0,0,Abase[0][0],Abase[0][1]}, 29419c2959aSHong Zhang {0,0,0,0,0,0,Abase[1][0],Abase[1][1]}}, 29519c2959aSHong Zhang Amb[8][8] = {{Abase[0][0]/m,Abase[0][1]/m,0,0,0,0,0,0}, 29619c2959aSHong Zhang {Abase[1][0]/m,Abase[1][1]/m,0,0,0,0,0,0}, 29719c2959aSHong Zhang {0,0,Abase[0][0]/m,Abase[0][1]/m,0,0,0,0}, 29819c2959aSHong Zhang {0,0,Abase[1][0]/m,Abase[1][1]/m,0,0,0,0}, 29919c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[0][0]/m,Abase[0][1]/m,0,0}, 30019c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[1][0]/m,Abase[1][1]/m,0,0}, 30119c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[0][0]/m,Abase[0][1]/m}, 30219c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[1][0]/m,Abase[1][1]/m}}, 30319c2959aSHong Zhang Af[8][8] = {{Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0,0,0}, 30419c2959aSHong Zhang {Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0,0,0}, 30519c2959aSHong Zhang {0,0,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0}, 30619c2959aSHong Zhang {0,0,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0}, 30719c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0}, 30819c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0}, 30919c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m,Abase[0][1]/m}, 31019c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m,Abase[1][1]/m}}, 31119c2959aSHong Zhang bsb[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m}, 31219c2959aSHong Zhang bmb[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m,bbase[1]/m/m}, 31319c2959aSHong Zhang bf[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m,bbase[0]/m/m,bbase[1]/m/m}, 31419c2959aSHong Zhang */ 3154b84eec9SHong Zhang /*{ 3164b84eec9SHong Zhang const PetscReal 3174b84eec9SHong Zhang As[8][8] = {{0,0,0,0,0,0,0,0}, 3184b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0}, 3194b84eec9SHong Zhang {RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0,0,0,0,0}, 3204b84eec9SHong Zhang {RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0,0}, 3214b84eec9SHong Zhang {0,0,0,0,0,0,0,0}, 3224b84eec9SHong Zhang {0,0,0,0,RC(1.0)/RC(2.0),0,0,0}, 3234b84eec9SHong Zhang {0,0,0,0,RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0}, 3244b84eec9SHong Zhang {0,0,0,0,RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0}}, 3254b84eec9SHong Zhang A[8][8] = {{0,0,0,0,0,0,0,0}, 3264b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0}, 3274b84eec9SHong Zhang {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0}, 3284b84eec9SHong Zhang {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0}, 3294b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0}, 3304b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(4.0),0,0,0}, 3314b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0}, 3324b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0}}, 3334b84eec9SHong Zhang bs[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)}, 3344b84eec9SHong Zhang b[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)}; 3354b84eec9SHong Zhang ierr = TSMPRKRegister(TSMPRKPM3,3,8,&As[0][0],bs,NULL,&A[0][0],b,NULL);CHKERRQ(ierr); 3364b84eec9SHong Zhang }*/ 3374b84eec9SHong Zhang 3384b84eec9SHong Zhang { 3394b84eec9SHong Zhang const PetscReal 34019c2959aSHong Zhang Asb[5][5] = {{0,0,0,0,0}, 3414b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3424b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3434b84eec9SHong Zhang {RC(1.0),0,0,0,0}, 3444b84eec9SHong Zhang {RC(1.0),0,0,0,0}}, 34519c2959aSHong Zhang Af[5][5] = {{0,0,0,0,0}, 3464b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3474b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0,0,0}, 3484b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(2.0),0,0}, 3494b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0}}, 35019c2959aSHong Zhang bsb[5] = {RC(1.0)/RC(2.0),0,0,0,RC(1.0)/RC(2.0)}, 35119c2959aSHong Zhang bf[5] = {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0}; 35219c2959aSHong Zhang const PetscInt 35319c2959aSHong Zhang rsb[5] = {0,0,2,0,4}; 35479bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRKP2,2,5,1,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 3554b84eec9SHong Zhang } 3564b84eec9SHong Zhang 3574b84eec9SHong Zhang { 3584b84eec9SHong Zhang const PetscReal 35919c2959aSHong Zhang Asb[10][10] = {{0,0,0,0,0,0,0,0,0,0}, 3604b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3614b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3624b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0}, 3634b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0}, 3644b84eec9SHong Zhang {RC(-1.0)/RC(6.0),0,0,0,RC(2.0)/RC(3.0),0,0,0,0,0}, 3654b84eec9SHong Zhang {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0}, 3664b84eec9SHong Zhang {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0}, 3674b84eec9SHong Zhang {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0}, 3684b84eec9SHong Zhang {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0}}, 36919c2959aSHong Zhang Af[10][10] = {{0,0,0,0,0,0,0,0,0,0}, 3704b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3714b84eec9SHong Zhang {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0,0,0}, 3724b84eec9SHong Zhang {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0,0,0}, 3734b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0}, 3744b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0}, 3754b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(4.0),0,0,0,0}, 3764b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0}, 3774b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0}, 3784b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0}}, 37919c2959aSHong Zhang bsb[10] = {RC(1.0)/RC(6.0),0,0,0,RC(1.0)/RC(3.0),RC(1.0)/RC(3.0),0,0,0,RC(1.0)/RC(6.0)}, 38019c2959aSHong Zhang bf[10] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0}; 38119c2959aSHong Zhang const PetscInt 38219c2959aSHong Zhang rsb[10] = {0,0,2,0,4,0,0,7,0,9}; 38379bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRKP3,3,5,2,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 3844b84eec9SHong Zhang } 3854b84eec9SHong Zhang #undef RC 3864b84eec9SHong Zhang PetscFunctionReturn(0); 3874b84eec9SHong Zhang } 3884b84eec9SHong Zhang 3894b84eec9SHong Zhang /*@C 3904b84eec9SHong Zhang TSMPRKRegisterDestroy - Frees the list of schemes that were registered by TSMPRKRegister(). 3914b84eec9SHong Zhang 3924b84eec9SHong Zhang Not Collective 3934b84eec9SHong Zhang 3944b84eec9SHong Zhang Level: advanced 3954b84eec9SHong Zhang 3964b84eec9SHong Zhang .seealso: TSMPRKRegister(), TSMPRKRegisterAll() 3974b84eec9SHong Zhang @*/ 3984b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterDestroy(void) 3994b84eec9SHong Zhang { 4004b84eec9SHong Zhang PetscErrorCode ierr; 4014b84eec9SHong Zhang MPRKTableauLink link; 4024b84eec9SHong Zhang 4034b84eec9SHong Zhang PetscFunctionBegin; 4044b84eec9SHong Zhang while ((link = MPRKTableauList)) { 4054b84eec9SHong Zhang MPRKTableau t = &link->tab; 4064b84eec9SHong Zhang MPRKTableauList = link->next; 40719c2959aSHong Zhang ierr = PetscFree3(t->Asb,t->bsb,t->csb);CHKERRQ(ierr); 40819c2959aSHong Zhang ierr = PetscFree3(t->Amb,t->bmb,t->cmb);CHKERRQ(ierr); 4094b84eec9SHong Zhang ierr = PetscFree3(t->Af,t->bf,t->cf);CHKERRQ(ierr); 41041eb3033SHong Zhang ierr = PetscFree(t->rsb);CHKERRQ(ierr); 41141eb3033SHong Zhang ierr = PetscFree(t->rmb);CHKERRQ(ierr); 4124b84eec9SHong Zhang ierr = PetscFree(t->name);CHKERRQ(ierr); 4134b84eec9SHong Zhang ierr = PetscFree(link);CHKERRQ(ierr); 4144b84eec9SHong Zhang } 4154b84eec9SHong Zhang TSMPRKRegisterAllCalled = PETSC_FALSE; 4164b84eec9SHong Zhang PetscFunctionReturn(0); 4174b84eec9SHong Zhang } 4184b84eec9SHong Zhang 4194b84eec9SHong Zhang /*@C 4204b84eec9SHong Zhang TSMPRKInitializePackage - This function initializes everything in the TSMPRK package. It is called 4214b84eec9SHong Zhang from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_MPRK() 4224b84eec9SHong Zhang when using static libraries. 4234b84eec9SHong Zhang 4244b84eec9SHong Zhang Level: developer 4254b84eec9SHong Zhang 4264b84eec9SHong Zhang .seealso: PetscInitialize() 4274b84eec9SHong Zhang @*/ 4284b84eec9SHong Zhang PetscErrorCode TSMPRKInitializePackage(void) 4294b84eec9SHong Zhang { 4304b84eec9SHong Zhang PetscErrorCode ierr; 4314b84eec9SHong Zhang 4324b84eec9SHong Zhang PetscFunctionBegin; 4334b84eec9SHong Zhang if (TSMPRKPackageInitialized) PetscFunctionReturn(0); 4344b84eec9SHong Zhang TSMPRKPackageInitialized = PETSC_TRUE; 4354b84eec9SHong Zhang ierr = TSMPRKRegisterAll();CHKERRQ(ierr); 4364b84eec9SHong Zhang ierr = PetscRegisterFinalize(TSMPRKFinalizePackage);CHKERRQ(ierr); 4374b84eec9SHong Zhang PetscFunctionReturn(0); 4384b84eec9SHong Zhang } 4394b84eec9SHong Zhang 4404b84eec9SHong Zhang /*@C 441f944a40eSHong Zhang TSMPRKFinalizePackage - This function destroys everything in the TSMPRK package. It is 4424b84eec9SHong Zhang called from PetscFinalize(). 4434b84eec9SHong Zhang 4444b84eec9SHong Zhang Level: developer 4454b84eec9SHong Zhang 4464b84eec9SHong Zhang .seealso: PetscFinalize() 4474b84eec9SHong Zhang @*/ 4484b84eec9SHong Zhang PetscErrorCode TSMPRKFinalizePackage(void) 4494b84eec9SHong Zhang { 4504b84eec9SHong Zhang PetscErrorCode ierr; 4514b84eec9SHong Zhang 4524b84eec9SHong Zhang PetscFunctionBegin; 4534b84eec9SHong Zhang TSMPRKPackageInitialized = PETSC_FALSE; 4544b84eec9SHong Zhang ierr = TSMPRKRegisterDestroy();CHKERRQ(ierr); 4554b84eec9SHong Zhang PetscFunctionReturn(0); 4564b84eec9SHong Zhang } 4574b84eec9SHong Zhang 4584b84eec9SHong Zhang /*@C 4594b84eec9SHong Zhang TSMPRKRegister - register a MPRK scheme by providing the entries in the Butcher tableau 4604b84eec9SHong Zhang 4614b84eec9SHong Zhang Not Collective, but the same schemes should be registered on all processes on which they will be used 4624b84eec9SHong Zhang 4634b84eec9SHong Zhang Input Parameters: 4644b84eec9SHong Zhang + name - identifier for method 4654b84eec9SHong Zhang . order - approximation order of method 46679bc8a77SHong Zhang . s - number of stages in the base methods 46779bc8a77SHong Zhang . ratio1 - stepsize ratio at 1st level (e.g. slow/medium) 46879bc8a77SHong Zhang . ratio2 - stepsize ratio at 2nd level (e.g. medium/fast) 4694b84eec9SHong Zhang . Af - stage coefficients for fast components(dimension s*s, row-major) 4704b84eec9SHong Zhang . bf - step completion table for fast components(dimension s) 4714b84eec9SHong Zhang . cf - abscissa for fast components(dimension s) 4724b84eec9SHong Zhang . As - stage coefficients for slow components(dimension s*s, row-major) 4734b84eec9SHong Zhang . bs - step completion table for slow components(dimension s) 4744b84eec9SHong Zhang - cs - abscissa for slow components(dimension s) 4754b84eec9SHong Zhang 4764b84eec9SHong Zhang Notes: 4774b84eec9SHong Zhang Several MPRK methods are provided, this function is only needed to create new methods. 4784b84eec9SHong Zhang 4794b84eec9SHong Zhang Level: advanced 4804b84eec9SHong Zhang 4814b84eec9SHong Zhang .seealso: TSMPRK 4824b84eec9SHong Zhang @*/ 48379bc8a77SHong Zhang PetscErrorCode TSMPRKRegister(TSMPRKType name,PetscInt order, 48479bc8a77SHong Zhang PetscInt sbase,PetscInt ratio1,PetscInt ratio2, 48519c2959aSHong Zhang const PetscReal Asb[],const PetscReal bsb[],const PetscReal csb[],const PetscInt rsb[], 48619c2959aSHong Zhang const PetscReal Amb[],const PetscReal bmb[],const PetscReal cmb[],const PetscInt rmb[], 4874b84eec9SHong Zhang const PetscReal Af[],const PetscReal bf[],const PetscReal cf[]) 4884b84eec9SHong Zhang { 4894b84eec9SHong Zhang MPRKTableauLink link; 4904b84eec9SHong Zhang MPRKTableau t; 49179bc8a77SHong Zhang PetscInt s,i,j; 4924b84eec9SHong Zhang PetscErrorCode ierr; 4934b84eec9SHong Zhang 4944b84eec9SHong Zhang PetscFunctionBegin; 4954b84eec9SHong Zhang PetscValidCharPointer(name,1); 496064a246eSJacob Faibussowitsch PetscValidRealPointer(Asb,6); 49779bc8a77SHong Zhang if (bsb) PetscValidRealPointer(bsb,7); 49879bc8a77SHong Zhang if (csb) PetscValidRealPointer(csb,8); 499064a246eSJacob Faibussowitsch if (rsb) PetscValidIntPointer(rsb,9); 50079bc8a77SHong Zhang if (Amb) PetscValidRealPointer(Amb,10); 50179bc8a77SHong Zhang if (bmb) PetscValidRealPointer(bmb,11); 50279bc8a77SHong Zhang if (cmb) PetscValidRealPointer(cmb,12); 503064a246eSJacob Faibussowitsch if (rmb) PetscValidIntPointer(rmb,13); 50479bc8a77SHong Zhang PetscValidRealPointer(Af,14); 50579bc8a77SHong Zhang if (bf) PetscValidRealPointer(bf,15); 50679bc8a77SHong Zhang if (cf) PetscValidRealPointer(cf,16); 5074b84eec9SHong Zhang 5084b84eec9SHong Zhang ierr = PetscNew(&link);CHKERRQ(ierr); 5094b84eec9SHong Zhang t = &link->tab; 5104b84eec9SHong Zhang 5114b84eec9SHong Zhang ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 51279bc8a77SHong Zhang s = sbase*ratio1*ratio2; /* this is the dimension of the matrices below */ 5134b84eec9SHong Zhang t->order = order; 51479bc8a77SHong Zhang t->sbase = sbase; 5154b84eec9SHong Zhang t->s = s; 51619c2959aSHong Zhang t->np = 2; 51779bc8a77SHong Zhang 5184b84eec9SHong Zhang ierr = PetscMalloc3(s*s,&t->Af,s,&t->bf,s,&t->cf);CHKERRQ(ierr); 519580bdb30SBarry Smith ierr = PetscArraycpy(t->Af,Af,s*s);CHKERRQ(ierr); 5204b84eec9SHong Zhang if (bf) { 521580bdb30SBarry Smith ierr = PetscArraycpy(t->bf,bf,s);CHKERRQ(ierr); 52219c2959aSHong Zhang } else 5234b84eec9SHong Zhang for (i=0; i<s; i++) t->bf[i] = Af[(s-1)*s+i]; 5244b84eec9SHong Zhang if (cf) { 525580bdb30SBarry Smith ierr = PetscArraycpy(t->cf,cf,s);CHKERRQ(ierr); 52619c2959aSHong Zhang } else { 5274b84eec9SHong Zhang for (i=0; i<s; i++) 5284b84eec9SHong Zhang for (j=0,t->cf[i]=0; j<s; j++) 5294b84eec9SHong Zhang t->cf[i] += Af[i*s+j]; 5304b84eec9SHong Zhang } 53119c2959aSHong Zhang 53219c2959aSHong Zhang if (Amb) { 53319c2959aSHong Zhang t->np = 3; 53419c2959aSHong Zhang ierr = PetscMalloc3(s*s,&t->Amb,s,&t->bmb,s,&t->cmb);CHKERRQ(ierr); 535580bdb30SBarry Smith ierr = PetscArraycpy(t->Amb,Amb,s*s);CHKERRQ(ierr); 53619c2959aSHong Zhang if (bmb) { 537580bdb30SBarry Smith ierr = PetscArraycpy(t->bmb,bmb,s);CHKERRQ(ierr); 53819c2959aSHong Zhang } else { 53919c2959aSHong Zhang for (i=0; i<s; i++) t->bmb[i] = Amb[(s-1)*s+i]; 5404b84eec9SHong Zhang } 54119c2959aSHong Zhang if (cmb) { 542580bdb30SBarry Smith ierr = PetscArraycpy(t->cmb,cmb,s);CHKERRQ(ierr); 54319c2959aSHong Zhang } else { 5444b84eec9SHong Zhang for (i=0; i<s; i++) 54519c2959aSHong Zhang for (j=0,t->cmb[i]=0; j<s; j++) 54619c2959aSHong Zhang t->cmb[i] += Amb[i*s+j]; 54719c2959aSHong Zhang } 54819c2959aSHong Zhang if (rmb) { 549071fcb05SBarry Smith ierr = PetscMalloc1(s,&t->rmb);CHKERRQ(ierr); 550580bdb30SBarry Smith ierr = PetscArraycpy(t->rmb,rmb,s);CHKERRQ(ierr); 551071fcb05SBarry Smith } else { 552071fcb05SBarry Smith ierr = PetscCalloc1(s,&t->rmb);CHKERRQ(ierr); 55319c2959aSHong Zhang } 55419c2959aSHong Zhang } 55519c2959aSHong Zhang 55619c2959aSHong Zhang ierr = PetscMalloc3(s*s,&t->Asb,s,&t->bsb,s,&t->csb);CHKERRQ(ierr); 557580bdb30SBarry Smith ierr = PetscArraycpy(t->Asb,Asb,s*s);CHKERRQ(ierr); 55819c2959aSHong Zhang if (bsb) { 559580bdb30SBarry Smith ierr = PetscArraycpy(t->bsb,bsb,s);CHKERRQ(ierr); 56019c2959aSHong Zhang } else 56119c2959aSHong Zhang for (i=0; i<s; i++) t->bsb[i] = Asb[(s-1)*s+i]; 56219c2959aSHong Zhang if (csb) { 563580bdb30SBarry Smith ierr = PetscArraycpy(t->csb,csb,s);CHKERRQ(ierr); 56419c2959aSHong Zhang } else { 56519c2959aSHong Zhang for (i=0; i<s; i++) 56619c2959aSHong Zhang for (j=0,t->csb[i]=0; j<s; j++) 56719c2959aSHong Zhang t->csb[i] += Asb[i*s+j]; 56819c2959aSHong Zhang } 56919c2959aSHong Zhang if (rsb) { 570071fcb05SBarry Smith ierr = PetscMalloc1(s,&t->rsb);CHKERRQ(ierr); 571580bdb30SBarry Smith ierr = PetscArraycpy(t->rsb,rsb,s);CHKERRQ(ierr); 572071fcb05SBarry Smith } else { 573071fcb05SBarry Smith ierr = PetscCalloc1(s,&t->rsb);CHKERRQ(ierr); 5744b84eec9SHong Zhang } 5754b84eec9SHong Zhang link->next = MPRKTableauList; 5764b84eec9SHong Zhang MPRKTableauList = link; 5774b84eec9SHong Zhang PetscFunctionReturn(0); 5784b84eec9SHong Zhang } 5794b84eec9SHong Zhang 5804b84eec9SHong Zhang static PetscErrorCode TSMPRKSetSplits(TS ts) 5814b84eec9SHong Zhang { 5824b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 58319c2959aSHong Zhang MPRKTableau tab = mprk->tableau; 5844b84eec9SHong Zhang DM dm,subdm,newdm; 5854b84eec9SHong Zhang PetscErrorCode ierr; 5864b84eec9SHong Zhang 5874b84eec9SHong Zhang PetscFunctionBegin; 5884b84eec9SHong Zhang ierr = TSRHSSplitGetSubTS(ts,"slow",&mprk->subts_slow);CHKERRQ(ierr); 5894b84eec9SHong Zhang ierr = TSRHSSplitGetSubTS(ts,"fast",&mprk->subts_fast);CHKERRQ(ierr); 5902c71b3e2SJacob Faibussowitsch PetscCheckFalse(!mprk->subts_slow || !mprk->subts_fast,PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up the RHSFunctions for 'slow' and 'fast' components using TSRHSSplitSetRHSFunction() or calling TSSetRHSFunction() for each sub-TS"); 5914b84eec9SHong Zhang 59219c2959aSHong Zhang /* Only copy the DM */ 5934b84eec9SHong Zhang ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 59419c2959aSHong Zhang 59519c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"slowbuffer",&mprk->subts_slowbuffer);CHKERRQ(ierr); 59619c2959aSHong Zhang if (!mprk->subts_slowbuffer) { 59719c2959aSHong Zhang mprk->subts_slowbuffer = mprk->subts_slow; 59819c2959aSHong Zhang mprk->subts_slow = NULL; 59919c2959aSHong Zhang } 60019c2959aSHong Zhang if (mprk->subts_slow) { 6014b84eec9SHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 6024b84eec9SHong Zhang ierr = TSGetDM(mprk->subts_slow,&subdm);CHKERRQ(ierr); 6034b84eec9SHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 6044b84eec9SHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 6054b84eec9SHong Zhang ierr = TSSetDM(mprk->subts_slow,newdm);CHKERRQ(ierr); 6064b84eec9SHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 60719c2959aSHong Zhang } 60819c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 60919c2959aSHong Zhang ierr = TSGetDM(mprk->subts_slowbuffer,&subdm);CHKERRQ(ierr); 61019c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 61119c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 61219c2959aSHong Zhang ierr = TSSetDM(mprk->subts_slowbuffer,newdm);CHKERRQ(ierr); 61319c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 61419c2959aSHong Zhang 61519c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 61619c2959aSHong Zhang ierr = TSGetDM(mprk->subts_fast,&subdm);CHKERRQ(ierr); 61719c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 61819c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 61919c2959aSHong Zhang ierr = TSSetDM(mprk->subts_fast,newdm);CHKERRQ(ierr); 62019c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 62119c2959aSHong Zhang 62219c2959aSHong Zhang if (tab->np == 3) { 62319c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"medium",&mprk->subts_medium);CHKERRQ(ierr); 62419c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"mediumbuffer",&mprk->subts_mediumbuffer);CHKERRQ(ierr); 62519c2959aSHong Zhang if (mprk->subts_medium && !mprk->subts_mediumbuffer) { 62619c2959aSHong Zhang mprk->subts_mediumbuffer = mprk->subts_medium; 62719c2959aSHong Zhang mprk->subts_medium = NULL; 62819c2959aSHong Zhang } 62919c2959aSHong Zhang if (mprk->subts_medium) { 63019c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 63119c2959aSHong Zhang ierr = TSGetDM(mprk->subts_medium,&subdm);CHKERRQ(ierr); 63219c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 63319c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 63419c2959aSHong Zhang ierr = TSSetDM(mprk->subts_medium,newdm);CHKERRQ(ierr); 63519c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 63619c2959aSHong Zhang } 63719c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 63819c2959aSHong Zhang ierr = TSGetDM(mprk->subts_mediumbuffer,&subdm);CHKERRQ(ierr); 63919c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 64019c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 64119c2959aSHong Zhang ierr = TSSetDM(mprk->subts_mediumbuffer,newdm);CHKERRQ(ierr); 64219c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 64319c2959aSHong Zhang } 6444b84eec9SHong Zhang PetscFunctionReturn(0); 6454b84eec9SHong Zhang } 6464b84eec9SHong Zhang 6474b84eec9SHong Zhang /* 6484b84eec9SHong Zhang This if for nonsplit RHS MPRK 6494b84eec9SHong Zhang The step completion formula is 6504b84eec9SHong Zhang 6514b84eec9SHong Zhang x1 = x0 + h b^T YdotRHS 6524b84eec9SHong Zhang 6534b84eec9SHong Zhang */ 6544b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRK(TS ts,PetscInt order,Vec X,PetscBool *done) 6554b84eec9SHong Zhang { 6564b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 6574b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 6587c0df07dSHong Zhang PetscScalar *wf = mprk->work_fast; 6594b84eec9SHong Zhang PetscReal h = ts->time_step; 6604b84eec9SHong Zhang PetscInt s = tab->s,j; 6614b84eec9SHong Zhang PetscErrorCode ierr; 6624b84eec9SHong Zhang 6634b84eec9SHong Zhang PetscFunctionBegin; 6644b84eec9SHong Zhang for (j=0; j<s; j++) wf[j] = h*tab->bf[j]; 6657c0df07dSHong Zhang ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 6667c0df07dSHong Zhang ierr = VecMAXPY(X,s,wf,mprk->YdotRHS);CHKERRQ(ierr); 6674b84eec9SHong Zhang PetscFunctionReturn(0); 6684b84eec9SHong Zhang } 6694b84eec9SHong Zhang 6704b84eec9SHong Zhang static PetscErrorCode TSStep_MPRK(TS ts) 6714b84eec9SHong Zhang { 6724b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 6737c0df07dSHong Zhang Vec *Y = mprk->Y,*YdotRHS = mprk->YdotRHS,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer; 6747c0df07dSHong Zhang Vec Yslow,Yslowbuffer,Yfast; 6754b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 6764b84eec9SHong Zhang const PetscInt s = tab->s; 67719c2959aSHong Zhang const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb; 678ebd5ed4eSHong Zhang PetscScalar *wf = mprk->work_fast,*wsb = mprk->work_slowbuffer; 679ebd5ed4eSHong Zhang PetscInt i,j; 6804b84eec9SHong Zhang PetscReal next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step; 6814b84eec9SHong Zhang PetscErrorCode ierr; 6824b84eec9SHong Zhang 6834b84eec9SHong Zhang PetscFunctionBegin; 6844b84eec9SHong Zhang for (i=0; i<s; i++) { 6854b84eec9SHong Zhang mprk->stage_time = t + h*cf[i]; 6864b84eec9SHong Zhang ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr); 6877c0df07dSHong Zhang ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 6884b84eec9SHong Zhang 6897c0df07dSHong Zhang /* slow buffer region */ 69019c2959aSHong Zhang for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j]; 6919849be05SHong Zhang for (j=0; j<i; j++) { 6927c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr); 6937c0df07dSHong Zhang } 6947c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 6957c0df07dSHong Zhang ierr = VecMAXPY(Yslowbuffer,i,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 6967c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 6979849be05SHong Zhang for (j=0; j<i; j++) { 6987c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr); 6997c0df07dSHong Zhang } 7007c0df07dSHong Zhang /* slow region */ 7017c0df07dSHong Zhang if (mprk->is_slow) { 7029849be05SHong Zhang for (j=0; j<i; j++) { 7037c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr); 7047c0df07dSHong Zhang } 7057c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 706ebd5ed4eSHong Zhang ierr = VecMAXPY(Yslow,i,wsb,mprk->YdotRHS_slow);CHKERRQ(ierr); 7077c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 708ebd5ed4eSHong Zhang for (j=0; j<i; j++) { 7097c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr); 7107c0df07dSHong Zhang } 7117c0df07dSHong Zhang } 7124b84eec9SHong Zhang 7137c0df07dSHong Zhang /* fast region */ 7144b84eec9SHong Zhang for (j=0; j<i; j++) wf[j] = h*Af[i*s+j]; 7159849be05SHong Zhang for (j=0; j<i; j++) { 7167c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr); 7177c0df07dSHong Zhang } 7187c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 7197c0df07dSHong Zhang ierr = VecMAXPY(Yfast,i,wf,mprk->YdotRHS_fast);CHKERRQ(ierr); 7207c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 7219849be05SHong Zhang for (j=0; j<i; j++) { 7227c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr); 7237c0df07dSHong Zhang } 7247c0df07dSHong Zhang if (tab->np == 3) { 7257c0df07dSHong Zhang Vec *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer; 7267c0df07dSHong Zhang Vec Ymedium,Ymediumbuffer; 727ebd5ed4eSHong Zhang PetscScalar *wmb = mprk->work_mediumbuffer; 728ebd5ed4eSHong Zhang 729ebd5ed4eSHong Zhang for (j=0; j<i; j++) wmb[j] = h*tab->Amb[i*s+j]; 7307c0df07dSHong Zhang /* medium region */ 7317c0df07dSHong Zhang if (mprk->is_medium) { 7327c0df07dSHong Zhang for (j=0; j<i; j++) { 7337c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr); 7347c0df07dSHong Zhang } 7357c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 736ebd5ed4eSHong Zhang ierr = VecMAXPY(Ymedium,i,wmb,mprk->YdotRHS_medium);CHKERRQ(ierr); 7377c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 738ebd5ed4eSHong Zhang for (j=0; j<i; j++) { 7397c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr); 7407c0df07dSHong Zhang } 7417c0df07dSHong Zhang } 7427c0df07dSHong Zhang /* medium buffer region */ 7439849be05SHong Zhang for (j=0; j<i; j++) { 7447c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr); 7457c0df07dSHong Zhang } 7467c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 7477c0df07dSHong Zhang ierr = VecMAXPY(Ymediumbuffer,i,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 7487c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 7499849be05SHong Zhang for (j=0; j<i; j++) { 7507c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr); 7517c0df07dSHong Zhang } 7527c0df07dSHong Zhang } 7534b84eec9SHong Zhang ierr = TSPostStage(ts,mprk->stage_time,i,Y);CHKERRQ(ierr); 7544b84eec9SHong Zhang /* compute the stage RHS by fast and slow tableau respectively */ 7557c0df07dSHong Zhang ierr = TSComputeRHSFunction(ts,t+h*csb[i],Y[i],YdotRHS[i]);CHKERRQ(ierr); 7564b84eec9SHong Zhang } 7574b84eec9SHong Zhang ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 7584b84eec9SHong Zhang ts->ptime += ts->time_step; 7594b84eec9SHong Zhang ts->time_step = next_time_step; 7604b84eec9SHong Zhang PetscFunctionReturn(0); 7614b84eec9SHong Zhang } 7624b84eec9SHong Zhang 7634b84eec9SHong Zhang /* 764f944a40eSHong Zhang This if for the case when split RHS is used 7654b84eec9SHong Zhang The step completion formula is 7664b84eec9SHong Zhang x1 = x0 + h b^T YdotRHS 7674b84eec9SHong Zhang */ 7684b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRKSPLIT(TS ts,PetscInt order,Vec X,PetscBool *done) 7694b84eec9SHong Zhang { 7704b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 7714b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 77219c2959aSHong Zhang Vec Xslow,Xfast,Xslowbuffer; /* subvectors for slow and fast componets in X respectively */ 77319c2959aSHong Zhang PetscScalar *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer; 7744b84eec9SHong Zhang PetscReal h = ts->time_step; 77579bc8a77SHong Zhang PetscInt s = tab->s,j,computedstages; 7764b84eec9SHong Zhang PetscErrorCode ierr; 7774b84eec9SHong Zhang 7784b84eec9SHong Zhang PetscFunctionBegin; 7794b84eec9SHong Zhang ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 78019c2959aSHong Zhang 78119c2959aSHong Zhang /* slow region */ 78219c2959aSHong Zhang if (mprk->is_slow) { 78379bc8a77SHong Zhang computedstages = 0; 78419c2959aSHong Zhang for (j=0; j<s; j++) { 7859849be05SHong Zhang if (tab->rsb[j]) ws[tab->rsb[j]-1] += h*tab->bsb[j]; 78679bc8a77SHong Zhang else ws[computedstages++] = h*tab->bsb[j]; 78719c2959aSHong Zhang } 7884b84eec9SHong Zhang ierr = VecGetSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr); 78979bc8a77SHong Zhang ierr = VecMAXPY(Xslow,computedstages,ws,mprk->YdotRHS_slow);CHKERRQ(ierr); 79019c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr); 79119c2959aSHong Zhang } 79219c2959aSHong Zhang 7939d6e09e9SHong Zhang if (tab->np == 3 && mprk->is_medium) { 7949d6e09e9SHong Zhang computedstages = 0; 7959d6e09e9SHong Zhang for (j=0; j<s; j++) { 7969d6e09e9SHong Zhang if (tab->rmb[j]) wsb[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += h*tab->bsb[j]; 7979d6e09e9SHong Zhang else wsb[computedstages++] = h*tab->bsb[j]; 7989d6e09e9SHong Zhang } 7999d6e09e9SHong Zhang ierr = VecGetSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8009d6e09e9SHong Zhang ierr = VecMAXPY(Xslowbuffer,computedstages,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 8019d6e09e9SHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8029d6e09e9SHong Zhang } else { 80319c2959aSHong Zhang /* slow buffer region */ 80419c2959aSHong Zhang for (j=0; j<s; j++) wsb[j] = h*tab->bsb[j]; 80519c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 80619c2959aSHong Zhang ierr = VecMAXPY(Xslowbuffer,s,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 80719c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8089d6e09e9SHong Zhang } 80919c2959aSHong Zhang if (tab->np == 3) { 81019c2959aSHong Zhang Vec Xmedium,Xmediumbuffer; 81119c2959aSHong Zhang PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer; 8129d6e09e9SHong Zhang /* medium region and slow buffer region */ 81319c2959aSHong Zhang if (mprk->is_medium) { 81479bc8a77SHong Zhang computedstages = 0; 81519c2959aSHong Zhang for (j=0; j<s; j++) { 81679bc8a77SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += h*tab->bmb[j]; 81779bc8a77SHong Zhang else wm[computedstages++] = h*tab->bmb[j]; 81819c2959aSHong Zhang } 81919c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr); 82079bc8a77SHong Zhang ierr = VecMAXPY(Xmedium,computedstages,wm,mprk->YdotRHS_medium);CHKERRQ(ierr); 82119c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr); 82219c2959aSHong Zhang } 82319c2959aSHong Zhang /* medium buffer region */ 82419c2959aSHong Zhang for (j=0; j<s; j++) wmb[j] = h*tab->bmb[j]; 82519c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr); 82619c2959aSHong Zhang ierr = VecMAXPY(Xmediumbuffer,s,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 82719c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr); 82819c2959aSHong Zhang } 82919c2959aSHong Zhang /* fast region */ 83019c2959aSHong Zhang for (j=0; j<s; j++) wf[j] = h*tab->bf[j]; 8314b84eec9SHong Zhang ierr = VecGetSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr); 8324b84eec9SHong Zhang ierr = VecMAXPY(Xfast,s,wf,mprk->YdotRHS_fast);CHKERRQ(ierr); 83319c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr); 8344b84eec9SHong Zhang PetscFunctionReturn(0); 8354b84eec9SHong Zhang } 8364b84eec9SHong Zhang 8374b84eec9SHong Zhang static PetscErrorCode TSStep_MPRKSPLIT(TS ts) 8384b84eec9SHong Zhang { 8394b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 8404b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 84119c2959aSHong Zhang Vec *Y = mprk->Y,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer; 84219c2959aSHong Zhang Vec Yslow,Yslowbuffer,Yfast; /* subvectors for slow and fast components in Y[i] respectively */ 84319c2959aSHong Zhang PetscInt s = tab->s; 84419c2959aSHong Zhang const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb; 84519c2959aSHong Zhang PetscScalar *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer; 84679bc8a77SHong Zhang PetscInt i,j,computedstages; 8474b84eec9SHong Zhang PetscReal next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step; 8484b84eec9SHong Zhang PetscErrorCode ierr; 8494b84eec9SHong Zhang 8504b84eec9SHong Zhang PetscFunctionBegin; 8514b84eec9SHong Zhang for (i=0; i<s; i++) { 8524b84eec9SHong Zhang mprk->stage_time = t + h*cf[i]; 8534b84eec9SHong Zhang ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr); 8544b84eec9SHong Zhang /* calculate the stage value for fast and slow components respectively */ 8554b84eec9SHong Zhang ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 85619c2959aSHong Zhang for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j]; 85719c2959aSHong Zhang 85819c2959aSHong Zhang /* slow buffer region */ 8599d6e09e9SHong Zhang if (tab->np == 3 && mprk->is_medium) { 8609d6e09e9SHong Zhang if (tab->rmb[i]) { 8619d6e09e9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8629d6e09e9SHong Zhang ierr = VecISCopy(Y[tab->rmb[i]-1],mprk->is_slowbuffer,SCATTER_REVERSE,Yslowbuffer);CHKERRQ(ierr); 8639d6e09e9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8649d6e09e9SHong Zhang } else { 8659d6e09e9SHong Zhang PetscScalar *wm = mprk->work_medium; 8669d6e09e9SHong Zhang computedstages = 0; 8679d6e09e9SHong Zhang for (j=0; j<i; j++) { 8689d6e09e9SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += wsb[j]; 8699d6e09e9SHong Zhang else wm[computedstages++] = wsb[j]; 8709d6e09e9SHong Zhang } 8719d6e09e9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8729d6e09e9SHong Zhang ierr = VecMAXPY(Yslowbuffer,computedstages,wm,YdotRHS_slowbuffer);CHKERRQ(ierr); 8739d6e09e9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8749d6e09e9SHong Zhang } 8759d6e09e9SHong Zhang } else { 87619c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 87719c2959aSHong Zhang ierr = VecMAXPY(Yslowbuffer,i,wsb,YdotRHS_slowbuffer);CHKERRQ(ierr); 87819c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8799d6e09e9SHong Zhang } 8809849be05SHong Zhang 88119c2959aSHong Zhang /* slow region */ 8829849be05SHong Zhang if (mprk->is_slow) { 8839849be05SHong Zhang if (tab->rsb[i]) { /* repeat previous stage */ 8849849be05SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 8859849be05SHong Zhang ierr = VecISCopy(Y[tab->rsb[i]-1],mprk->is_slow,SCATTER_REVERSE,Yslow);CHKERRQ(ierr); 8869849be05SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 8879849be05SHong Zhang } else { 88879bc8a77SHong Zhang computedstages = 0; 88919c2959aSHong Zhang for (j=0; j<i; j++) { 89079bc8a77SHong Zhang if (tab->rsb[j]) ws[tab->rsb[j]-1] += wsb[j]; 89179bc8a77SHong Zhang else ws[computedstages++] = wsb[j]; 89219c2959aSHong Zhang } 8934b84eec9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 89479bc8a77SHong Zhang ierr = VecMAXPY(Yslow,computedstages,ws,YdotRHS_slow);CHKERRQ(ierr); 8954b84eec9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 89619c2959aSHong Zhang /* only depends on the slow buffer region */ 89779bc8a77SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slow,t+h*csb[i],Y[i],YdotRHS_slow[computedstages]);CHKERRQ(ierr); 89819c2959aSHong Zhang } 8999849be05SHong Zhang } 90019c2959aSHong Zhang 90119c2959aSHong Zhang /* fast region */ 90219c2959aSHong Zhang for (j=0; j<i; j++) wf[j] = h*Af[i*s+j]; 90319c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 90419c2959aSHong Zhang ierr = VecMAXPY(Yfast,i,wf,YdotRHS_fast);CHKERRQ(ierr); 9054b84eec9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 90619c2959aSHong Zhang 90719c2959aSHong Zhang if (tab->np == 3) { 90819c2959aSHong Zhang Vec *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer; 90919c2959aSHong Zhang Vec Ymedium,Ymediumbuffer; 91019c2959aSHong Zhang const PetscReal *Amb = tab->Amb,*cmb = tab->cmb; 91119c2959aSHong Zhang PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer; 91219c2959aSHong Zhang 91319c2959aSHong Zhang for (j=0; j<i; j++) wmb[j] = h*Amb[i*s+j]; 91419c2959aSHong Zhang /* medium buffer region */ 91519c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 91619c2959aSHong Zhang ierr = VecMAXPY(Ymediumbuffer,i,wmb,YdotRHS_mediumbuffer);CHKERRQ(ierr); 91719c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 91819c2959aSHong Zhang /* medium region */ 91979bc8a77SHong Zhang if (mprk->is_medium) { 92079bc8a77SHong Zhang if (tab->rmb[i]) { /* repeat previous stage */ 92179bc8a77SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 92279bc8a77SHong Zhang ierr = VecISCopy(Y[tab->rmb[i]-1],mprk->is_medium,SCATTER_REVERSE,Ymedium);CHKERRQ(ierr); 92319c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 92479bc8a77SHong Zhang } else { 92579bc8a77SHong Zhang computedstages = 0; 92679bc8a77SHong Zhang for (j=0; j<i; j++) { 92779bc8a77SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += wmb[j]; 92879bc8a77SHong Zhang else wm[computedstages++] = wmb[j]; 92979bc8a77SHong Zhang 93079bc8a77SHong Zhang } 93179bc8a77SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 93279bc8a77SHong Zhang ierr = VecMAXPY(Ymedium,computedstages,wm,YdotRHS_medium);CHKERRQ(ierr); 93379bc8a77SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 93479bc8a77SHong Zhang /* only depends on the medium buffer region */ 93579bc8a77SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_medium,t+h*cmb[i],Y[i],YdotRHS_medium[computedstages]);CHKERRQ(ierr); 9369d6e09e9SHong Zhang /* must be computed after all regions are updated in Y */ 9379d6e09e9SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slowbuffer,t+h*csb[i],Y[i],YdotRHS_slowbuffer[computedstages]);CHKERRQ(ierr); 93879bc8a77SHong Zhang } 93919c2959aSHong Zhang } 94019c2959aSHong Zhang /* must be computed after fast region and slow region are updated in Y */ 94119c2959aSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_mediumbuffer,t+h*cmb[i],Y[i],YdotRHS_mediumbuffer[i]);CHKERRQ(ierr); 94219c2959aSHong Zhang } 9439d6e09e9SHong Zhang if (!(tab->np == 3 && mprk->is_medium)) { 94419c2959aSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slowbuffer,t+h*csb[i],Y[i],YdotRHS_slowbuffer[i]);CHKERRQ(ierr); 9459d6e09e9SHong Zhang } 946bf0cca7dSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_fast,t+h*cf[i],Y[i],YdotRHS_fast[i]);CHKERRQ(ierr); 9474b84eec9SHong Zhang } 94879bc8a77SHong Zhang 9494b84eec9SHong Zhang ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 9504b84eec9SHong Zhang ts->ptime += ts->time_step; 9514b84eec9SHong Zhang ts->time_step = next_time_step; 9524b84eec9SHong Zhang PetscFunctionReturn(0); 9534b84eec9SHong Zhang } 9544b84eec9SHong Zhang 9554b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauReset(TS ts) 9564b84eec9SHong Zhang { 9574b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 9584b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 9594b84eec9SHong Zhang PetscErrorCode ierr; 9604b84eec9SHong Zhang 9614b84eec9SHong Zhang PetscFunctionBegin; 9624b84eec9SHong Zhang if (!tab) PetscFunctionReturn(0); 9634b84eec9SHong Zhang ierr = PetscFree(mprk->work_fast);CHKERRQ(ierr); 9644b84eec9SHong Zhang ierr = PetscFree(mprk->work_slow);CHKERRQ(ierr); 9657c0df07dSHong Zhang ierr = PetscFree(mprk->work_slowbuffer);CHKERRQ(ierr); 9667c0df07dSHong Zhang ierr = PetscFree(mprk->work_medium);CHKERRQ(ierr); 9677c0df07dSHong Zhang ierr = PetscFree(mprk->work_mediumbuffer);CHKERRQ(ierr); 9684b84eec9SHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->Y);CHKERRQ(ierr); 9690fe4d17eSHong Zhang if (ts->use_splitrhsfunction) { 9700fe4d17eSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 9710fe4d17eSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 9720fe4d17eSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 9730fe4d17eSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 9740fe4d17eSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 9750fe4d17eSHong Zhang } else { 9767c0df07dSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS);CHKERRQ(ierr); 9777c0df07dSHong Zhang if (mprk->is_slow) { 9787c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_slow);CHKERRQ(ierr); 9794b84eec9SHong Zhang } 9807c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 9817c0df07dSHong Zhang if (tab->np == 3) { 9827c0df07dSHong Zhang if (mprk->is_medium) { 9837c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_medium);CHKERRQ(ierr); 9847c0df07dSHong Zhang } 9857c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 9867c0df07dSHong Zhang } 9877c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_fast);CHKERRQ(ierr); 9887c0df07dSHong Zhang } 9894b84eec9SHong Zhang PetscFunctionReturn(0); 9904b84eec9SHong Zhang } 9914b84eec9SHong Zhang 9924b84eec9SHong Zhang static PetscErrorCode TSReset_MPRK(TS ts) 9934b84eec9SHong Zhang { 9944b84eec9SHong Zhang PetscErrorCode ierr; 9954b84eec9SHong Zhang 9964b84eec9SHong Zhang PetscFunctionBegin; 9974b84eec9SHong Zhang ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr); 9984b84eec9SHong Zhang PetscFunctionReturn(0); 9994b84eec9SHong Zhang } 10004b84eec9SHong Zhang 10014b84eec9SHong Zhang static PetscErrorCode DMCoarsenHook_TSMPRK(DM fine,DM coarse,void *ctx) 10024b84eec9SHong Zhang { 10034b84eec9SHong Zhang PetscFunctionBegin; 10044b84eec9SHong Zhang PetscFunctionReturn(0); 10054b84eec9SHong Zhang } 10064b84eec9SHong Zhang 10074b84eec9SHong Zhang static PetscErrorCode DMRestrictHook_TSMPRK(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 10084b84eec9SHong Zhang { 10094b84eec9SHong Zhang PetscFunctionBegin; 10104b84eec9SHong Zhang PetscFunctionReturn(0); 10114b84eec9SHong Zhang } 10124b84eec9SHong Zhang 10134b84eec9SHong Zhang static PetscErrorCode DMSubDomainHook_TSMPRK(DM dm,DM subdm,void *ctx) 10144b84eec9SHong Zhang { 10154b84eec9SHong Zhang PetscFunctionBegin; 10164b84eec9SHong Zhang PetscFunctionReturn(0); 10174b84eec9SHong Zhang } 10184b84eec9SHong Zhang 10194b84eec9SHong Zhang static PetscErrorCode DMSubDomainRestrictHook_TSMPRK(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx) 10204b84eec9SHong Zhang { 10214b84eec9SHong Zhang PetscFunctionBegin; 10224b84eec9SHong Zhang PetscFunctionReturn(0); 10234b84eec9SHong Zhang } 10244b84eec9SHong Zhang 10254b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauSetUp(TS ts) 10264b84eec9SHong Zhang { 10274b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 10284b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 102919c2959aSHong Zhang Vec YdotRHS_slow,YdotRHS_slowbuffer,YdotRHS_medium,YdotRHS_mediumbuffer,YdotRHS_fast; 10304b84eec9SHong Zhang PetscErrorCode ierr; 10314b84eec9SHong Zhang 10324b84eec9SHong Zhang PetscFunctionBegin; 10334b84eec9SHong Zhang ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->Y);CHKERRQ(ierr); 10347c0df07dSHong Zhang if (mprk->is_slow) { 103519c2959aSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_slow);CHKERRQ(ierr); 10364b84eec9SHong Zhang } 10377c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_slowbuffer);CHKERRQ(ierr); 10387c0df07dSHong Zhang if (tab->np == 3) { 10397c0df07dSHong Zhang if (mprk->is_medium) { 10407c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_medium);CHKERRQ(ierr); 10417c0df07dSHong Zhang } 10427c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_mediumbuffer);CHKERRQ(ierr); 10437c0df07dSHong Zhang } 10447c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_fast);CHKERRQ(ierr); 10457c0df07dSHong Zhang 10460fe4d17eSHong Zhang if (ts->use_splitrhsfunction) { 104719c2959aSHong Zhang if (mprk->is_slow) { 10484b84eec9SHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr); 10494b84eec9SHong Zhang ierr = VecDuplicateVecs(YdotRHS_slow,tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 10504b84eec9SHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr); 105119c2959aSHong Zhang } 105219c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr); 105319c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_slowbuffer,tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 105419c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr); 105519c2959aSHong Zhang if (tab->np == 3) { 105619c2959aSHong Zhang if (mprk->is_medium) { 105719c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr); 105819c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_medium,tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 105919c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr); 106019c2959aSHong Zhang } 106119c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr); 106219c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_mediumbuffer,tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 106319c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr); 106419c2959aSHong Zhang } 106519c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr); 106619c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_fast,tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 10674b84eec9SHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr); 10680fe4d17eSHong Zhang } else { 10690fe4d17eSHong Zhang ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->YdotRHS);CHKERRQ(ierr); 10700fe4d17eSHong Zhang if (mprk->is_slow) { 10710fe4d17eSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 10720fe4d17eSHong Zhang } 10730fe4d17eSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 10740fe4d17eSHong Zhang if (tab->np == 3) { 10750fe4d17eSHong Zhang if (mprk->is_medium) { 10760fe4d17eSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 10770fe4d17eSHong Zhang } 10780fe4d17eSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 10790fe4d17eSHong Zhang } 10800fe4d17eSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 10814b84eec9SHong Zhang } 10824b84eec9SHong Zhang PetscFunctionReturn(0); 10834b84eec9SHong Zhang } 10844b84eec9SHong Zhang 10854b84eec9SHong Zhang static PetscErrorCode TSSetUp_MPRK(TS ts) 10864b84eec9SHong Zhang { 10874b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 108819c2959aSHong Zhang MPRKTableau tab = mprk->tableau; 10894b84eec9SHong Zhang DM dm; 10904b84eec9SHong Zhang PetscErrorCode ierr; 10914b84eec9SHong Zhang 10924b84eec9SHong Zhang PetscFunctionBegin; 10934b84eec9SHong Zhang ierr = TSRHSSplitGetIS(ts,"slow",&mprk->is_slow);CHKERRQ(ierr); 10944b84eec9SHong Zhang ierr = TSRHSSplitGetIS(ts,"fast",&mprk->is_fast);CHKERRQ(ierr); 10952c71b3e2SJacob Faibussowitsch PetscCheckFalse(!mprk->is_slow || !mprk->is_fast,PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'fast' respectively in order to use the method '%s'",tab->name); 109619c2959aSHong Zhang 109719c2959aSHong Zhang if (tab->np == 3) { 109819c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"medium",&mprk->is_medium);CHKERRQ(ierr); 10992c71b3e2SJacob Faibussowitsch PetscCheckFalse(!mprk->is_medium,PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'medium' and 'fast' respectively in order to use the method '%s'",tab->name); 110019c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"mediumbuffer",&mprk->is_mediumbuffer);CHKERRQ(ierr); 110119c2959aSHong Zhang if (!mprk->is_mediumbuffer) { /* let medium buffer cover whole medium region */ 110219c2959aSHong Zhang mprk->is_mediumbuffer = mprk->is_medium; 110319c2959aSHong Zhang mprk->is_medium = NULL; 110419c2959aSHong Zhang } 110519c2959aSHong Zhang } 110619c2959aSHong Zhang 110719c2959aSHong Zhang /* If users do not provide buffer region settings, the solver will do them automatically, but with a performance penalty */ 110819c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"slowbuffer",&mprk->is_slowbuffer);CHKERRQ(ierr); 110919c2959aSHong Zhang if (!mprk->is_slowbuffer) { /* let slow buffer cover whole slow region */ 111019c2959aSHong Zhang mprk->is_slowbuffer = mprk->is_slow; 111119c2959aSHong Zhang mprk->is_slow = NULL; 111219c2959aSHong Zhang } 11134b84eec9SHong Zhang ierr = TSCheckImplicitTerm(ts);CHKERRQ(ierr); 11144b84eec9SHong Zhang ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr); 11154b84eec9SHong Zhang ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 11164b84eec9SHong Zhang ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 11174b84eec9SHong Zhang ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 11180fe4d17eSHong Zhang if (ts->use_splitrhsfunction) { 11190fe4d17eSHong Zhang ts->ops->step = TSStep_MPRKSPLIT; 11200fe4d17eSHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRKSPLIT; 11210fe4d17eSHong Zhang ierr = TSMPRKSetSplits(ts);CHKERRQ(ierr); 11220fe4d17eSHong Zhang } else { 11230fe4d17eSHong Zhang ts->ops->step = TSStep_MPRK; 11240fe4d17eSHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRK; 11250fe4d17eSHong Zhang } 11264b84eec9SHong Zhang PetscFunctionReturn(0); 11274b84eec9SHong Zhang } 11284b84eec9SHong Zhang 11294b84eec9SHong Zhang static PetscErrorCode TSSetFromOptions_MPRK(PetscOptionItems *PetscOptionsObject,TS ts) 11304b84eec9SHong Zhang { 11314b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 11324b84eec9SHong Zhang PetscErrorCode ierr; 11334b84eec9SHong Zhang 11344b84eec9SHong Zhang PetscFunctionBegin; 11354b84eec9SHong Zhang ierr = PetscOptionsHead(PetscOptionsObject,"PRK ODE solver options");CHKERRQ(ierr); 11364b84eec9SHong Zhang { 11374b84eec9SHong Zhang MPRKTableauLink link; 11384b84eec9SHong Zhang PetscInt count,choice; 11394b84eec9SHong Zhang PetscBool flg; 11404b84eec9SHong Zhang const char **namelist; 11414b84eec9SHong Zhang for (link=MPRKTableauList,count=0; link; link=link->next,count++) ; 11424b84eec9SHong Zhang ierr = PetscMalloc1(count,(char***)&namelist);CHKERRQ(ierr); 11434b84eec9SHong Zhang for (link=MPRKTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 11444b84eec9SHong Zhang ierr = PetscOptionsEList("-ts_mprk_type","Family of MPRK method","TSMPRKSetType",(const char*const*)namelist,count,mprk->tableau->name,&choice,&flg);CHKERRQ(ierr); 11454b84eec9SHong Zhang if (flg) {ierr = TSMPRKSetType(ts,namelist[choice]);CHKERRQ(ierr);} 11464b84eec9SHong Zhang ierr = PetscFree(namelist);CHKERRQ(ierr); 11474b84eec9SHong Zhang } 11484b84eec9SHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 11494b84eec9SHong Zhang PetscFunctionReturn(0); 11504b84eec9SHong Zhang } 11514b84eec9SHong Zhang 11524b84eec9SHong Zhang static PetscErrorCode TSView_MPRK(TS ts,PetscViewer viewer) 11534b84eec9SHong Zhang { 11544b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 11554b84eec9SHong Zhang PetscBool iascii; 11564b84eec9SHong Zhang PetscErrorCode ierr; 11574b84eec9SHong Zhang 11584b84eec9SHong Zhang PetscFunctionBegin; 11594b84eec9SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 11604b84eec9SHong Zhang if (iascii) { 11614b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 11624b84eec9SHong Zhang TSMPRKType mprktype; 11634b84eec9SHong Zhang char fbuf[512]; 11644b84eec9SHong Zhang char sbuf[512]; 116519c2959aSHong Zhang PetscInt i; 11664b84eec9SHong Zhang ierr = TSMPRKGetType(ts,&mprktype);CHKERRQ(ierr); 11674b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," MPRK type %s\n",mprktype);CHKERRQ(ierr); 11684b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Order: %D\n",tab->order);CHKERRQ(ierr); 116919c2959aSHong Zhang 11704b84eec9SHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->cf);CHKERRQ(ierr); 11714b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa cf = %s\n",fbuf);CHKERRQ(ierr); 117219c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Af = \n");CHKERRQ(ierr); 117319c2959aSHong Zhang for (i=0; i<tab->s; i++) { 117419c2959aSHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,&tab->Af[i*tab->s]);CHKERRQ(ierr); 117519c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",fbuf);CHKERRQ(ierr); 117619c2959aSHong Zhang } 117719c2959aSHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->bf);CHKERRQ(ierr); 117819c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bf = %s\n",fbuf);CHKERRQ(ierr); 117919c2959aSHong Zhang 118019c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->csb);CHKERRQ(ierr); 118119c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa csb = %s\n",sbuf);CHKERRQ(ierr); 118219c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Asb = \n");CHKERRQ(ierr); 118319c2959aSHong Zhang for (i=0; i<tab->s; i++) { 118419c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,&tab->Asb[i*tab->s]);CHKERRQ(ierr); 118519c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",sbuf);CHKERRQ(ierr); 118619c2959aSHong Zhang } 118719c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->bsb);CHKERRQ(ierr); 118819c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bsb = %s\n",sbuf);CHKERRQ(ierr); 118919c2959aSHong Zhang 119019c2959aSHong Zhang if (tab->np == 3) { 119119c2959aSHong Zhang char mbuf[512]; 119219c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->cmb);CHKERRQ(ierr); 119319c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa cmb = %s\n",mbuf);CHKERRQ(ierr); 119419c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Amb = \n");CHKERRQ(ierr); 119519c2959aSHong Zhang for (i=0; i<tab->s; i++) { 119619c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,&tab->Amb[i*tab->s]);CHKERRQ(ierr); 119719c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",mbuf);CHKERRQ(ierr); 119819c2959aSHong Zhang } 119919c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->bmb);CHKERRQ(ierr); 120019c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bmb = %s\n",mbuf);CHKERRQ(ierr); 120119c2959aSHong Zhang } 12024b84eec9SHong Zhang } 12034b84eec9SHong Zhang PetscFunctionReturn(0); 12044b84eec9SHong Zhang } 12054b84eec9SHong Zhang 12064b84eec9SHong Zhang static PetscErrorCode TSLoad_MPRK(TS ts,PetscViewer viewer) 12074b84eec9SHong Zhang { 12084b84eec9SHong Zhang PetscErrorCode ierr; 12094b84eec9SHong Zhang TSAdapt adapt; 12104b84eec9SHong Zhang 12114b84eec9SHong Zhang PetscFunctionBegin; 12124b84eec9SHong Zhang ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 12134b84eec9SHong Zhang ierr = TSAdaptLoad(adapt,viewer);CHKERRQ(ierr); 12144b84eec9SHong Zhang PetscFunctionReturn(0); 12154b84eec9SHong Zhang } 12164b84eec9SHong Zhang 12174b84eec9SHong Zhang /*@C 12184b84eec9SHong Zhang TSMPRKSetType - Set the type of MPRK scheme 12194b84eec9SHong Zhang 12200fe4d17eSHong Zhang Not collective 12214b84eec9SHong Zhang 1222d8d19677SJose E. Roman Input Parameters: 12234b84eec9SHong Zhang + ts - timestepping context 12244b84eec9SHong Zhang - mprktype - type of MPRK-scheme 12254b84eec9SHong Zhang 12264b84eec9SHong Zhang Options Database: 1227*147403d9SBarry Smith . -ts_mprk_type - <pm2,p2,p3> - select the specific scheme 12284b84eec9SHong Zhang 12294b84eec9SHong Zhang Level: intermediate 12304b84eec9SHong Zhang 12314b84eec9SHong Zhang .seealso: TSMPRKGetType(), TSMPRK, TSMPRKType 12324b84eec9SHong Zhang @*/ 12334b84eec9SHong Zhang PetscErrorCode TSMPRKSetType(TS ts,TSMPRKType mprktype) 12344b84eec9SHong Zhang { 12354b84eec9SHong Zhang PetscErrorCode ierr; 12364b84eec9SHong Zhang 12374b84eec9SHong Zhang PetscFunctionBegin; 12384b84eec9SHong Zhang PetscValidHeaderSpecific(ts,TS_CLASSID,1); 12394b84eec9SHong Zhang PetscValidCharPointer(mprktype,2); 12404b84eec9SHong Zhang ierr = PetscTryMethod(ts,"TSMPRKSetType_C",(TS,TSMPRKType),(ts,mprktype));CHKERRQ(ierr); 12414b84eec9SHong Zhang PetscFunctionReturn(0); 12424b84eec9SHong Zhang } 12434b84eec9SHong Zhang 12444b84eec9SHong Zhang /*@C 12454b84eec9SHong Zhang TSMPRKGetType - Get the type of MPRK scheme 12464b84eec9SHong Zhang 12470fe4d17eSHong Zhang Not collective 12484b84eec9SHong Zhang 12494b84eec9SHong Zhang Input Parameter: 12504b84eec9SHong Zhang . ts - timestepping context 12514b84eec9SHong Zhang 12524b84eec9SHong Zhang Output Parameter: 12534b84eec9SHong Zhang . mprktype - type of MPRK-scheme 12544b84eec9SHong Zhang 12554b84eec9SHong Zhang Level: intermediate 12564b84eec9SHong Zhang 12574b84eec9SHong Zhang .seealso: TSMPRKGetType() 12584b84eec9SHong Zhang @*/ 12594b84eec9SHong Zhang PetscErrorCode TSMPRKGetType(TS ts,TSMPRKType *mprktype) 12604b84eec9SHong Zhang { 12614b84eec9SHong Zhang PetscErrorCode ierr; 12624b84eec9SHong Zhang 12634b84eec9SHong Zhang PetscFunctionBegin; 12644b84eec9SHong Zhang PetscValidHeaderSpecific(ts,TS_CLASSID,1); 12654b84eec9SHong Zhang ierr = PetscUseMethod(ts,"TSMPRKGetType_C",(TS,TSMPRKType*),(ts,mprktype));CHKERRQ(ierr); 12664b84eec9SHong Zhang PetscFunctionReturn(0); 12674b84eec9SHong Zhang } 12684b84eec9SHong Zhang 12694b84eec9SHong Zhang static PetscErrorCode TSMPRKGetType_MPRK(TS ts,TSMPRKType *mprktype) 12704b84eec9SHong Zhang { 12714b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 12724b84eec9SHong Zhang 12734b84eec9SHong Zhang PetscFunctionBegin; 12744b84eec9SHong Zhang *mprktype = mprk->tableau->name; 12754b84eec9SHong Zhang PetscFunctionReturn(0); 12764b84eec9SHong Zhang } 12774b84eec9SHong Zhang 12784b84eec9SHong Zhang static PetscErrorCode TSMPRKSetType_MPRK(TS ts,TSMPRKType mprktype) 12794b84eec9SHong Zhang { 12804b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 12814b84eec9SHong Zhang PetscBool match; 12824b84eec9SHong Zhang MPRKTableauLink link; 12834b84eec9SHong Zhang PetscErrorCode ierr; 12844b84eec9SHong Zhang 12854b84eec9SHong Zhang PetscFunctionBegin; 12864b84eec9SHong Zhang if (mprk->tableau) { 12874b84eec9SHong Zhang ierr = PetscStrcmp(mprk->tableau->name,mprktype,&match);CHKERRQ(ierr); 12884b84eec9SHong Zhang if (match) PetscFunctionReturn(0); 12894b84eec9SHong Zhang } 12904b84eec9SHong Zhang for (link = MPRKTableauList; link; link=link->next) { 12914b84eec9SHong Zhang ierr = PetscStrcmp(link->tab.name,mprktype,&match);CHKERRQ(ierr); 12924b84eec9SHong Zhang if (match) { 12934b84eec9SHong Zhang if (ts->setupcalled) {ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr);} 12944b84eec9SHong Zhang mprk->tableau = &link->tab; 12954b84eec9SHong Zhang if (ts->setupcalled) {ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr);} 12964b84eec9SHong Zhang PetscFunctionReturn(0); 12974b84eec9SHong Zhang } 12984b84eec9SHong Zhang } 129998921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",mprktype); 13004b84eec9SHong Zhang } 13014b84eec9SHong Zhang 13024b84eec9SHong Zhang static PetscErrorCode TSGetStages_MPRK(TS ts,PetscInt *ns,Vec **Y) 13034b84eec9SHong Zhang { 13044b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 13054b84eec9SHong Zhang 13064b84eec9SHong Zhang PetscFunctionBegin; 13074b84eec9SHong Zhang *ns = mprk->tableau->s; 13084b84eec9SHong Zhang if (Y) *Y = mprk->Y; 13094b84eec9SHong Zhang PetscFunctionReturn(0); 13104b84eec9SHong Zhang } 13114b84eec9SHong Zhang 13124b84eec9SHong Zhang static PetscErrorCode TSDestroy_MPRK(TS ts) 13134b84eec9SHong Zhang { 13144b84eec9SHong Zhang PetscErrorCode ierr; 13154b84eec9SHong Zhang 13164b84eec9SHong Zhang PetscFunctionBegin; 13174b84eec9SHong Zhang ierr = TSReset_MPRK(ts);CHKERRQ(ierr); 13184b84eec9SHong Zhang if (ts->dm) { 13194b84eec9SHong Zhang ierr = DMCoarsenHookRemove(ts->dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 13204b84eec9SHong Zhang ierr = DMSubDomainHookRemove(ts->dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 13214b84eec9SHong Zhang } 13224b84eec9SHong Zhang ierr = PetscFree(ts->data);CHKERRQ(ierr); 13234b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",NULL);CHKERRQ(ierr); 13244b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",NULL);CHKERRQ(ierr); 13254b84eec9SHong Zhang PetscFunctionReturn(0); 13264b84eec9SHong Zhang } 13274b84eec9SHong Zhang 13284b84eec9SHong Zhang /*MC 1329f944a40eSHong Zhang TSMPRK - ODE solver using Multirate Partitioned Runge-Kutta schemes 13304b84eec9SHong Zhang 13314b84eec9SHong Zhang The user should provide the right hand side of the equation 13324b84eec9SHong Zhang using TSSetRHSFunction(). 13334b84eec9SHong Zhang 13344b84eec9SHong Zhang Notes: 1335f944a40eSHong Zhang The default is TSMPRKPM2, it can be changed with TSMPRKSetType() or -ts_mprk_type 13364b84eec9SHong Zhang 13374b84eec9SHong Zhang Level: beginner 13384b84eec9SHong Zhang 13394b84eec9SHong Zhang .seealso: TSCreate(), TS, TSSetType(), TSMPRKSetType(), TSMPRKGetType(), TSMPRKType, TSMPRKRegister(), TSMPRKSetMultirateType() 13404b84eec9SHong Zhang TSMPRKM2, TSMPRKM3, TSMPRKRFSMR3, TSMPRKRFSMR2 13414b84eec9SHong Zhang 13424b84eec9SHong Zhang M*/ 13434b84eec9SHong Zhang PETSC_EXTERN PetscErrorCode TSCreate_MPRK(TS ts) 13444b84eec9SHong Zhang { 13454b84eec9SHong Zhang TS_MPRK *mprk; 13464b84eec9SHong Zhang PetscErrorCode ierr; 13474b84eec9SHong Zhang 13484b84eec9SHong Zhang PetscFunctionBegin; 13494b84eec9SHong Zhang ierr = TSMPRKInitializePackage();CHKERRQ(ierr); 13504b84eec9SHong Zhang 13514b84eec9SHong Zhang ts->ops->reset = TSReset_MPRK; 13524b84eec9SHong Zhang ts->ops->destroy = TSDestroy_MPRK; 13534b84eec9SHong Zhang ts->ops->view = TSView_MPRK; 13544b84eec9SHong Zhang ts->ops->load = TSLoad_MPRK; 13554b84eec9SHong Zhang ts->ops->setup = TSSetUp_MPRK; 13564b84eec9SHong Zhang ts->ops->step = TSStep_MPRK; 13574b84eec9SHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRK; 13584b84eec9SHong Zhang ts->ops->setfromoptions = TSSetFromOptions_MPRK; 13594b84eec9SHong Zhang ts->ops->getstages = TSGetStages_MPRK; 13604b84eec9SHong Zhang 13614b84eec9SHong Zhang ierr = PetscNewLog(ts,&mprk);CHKERRQ(ierr); 13624b84eec9SHong Zhang ts->data = (void*)mprk; 13634b84eec9SHong Zhang 13644b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",TSMPRKGetType_MPRK);CHKERRQ(ierr); 13654b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",TSMPRKSetType_MPRK);CHKERRQ(ierr); 13664b84eec9SHong Zhang 13674b84eec9SHong Zhang ierr = TSMPRKSetType(ts,TSMPRKDefault);CHKERRQ(ierr); 13684b84eec9SHong Zhang PetscFunctionReturn(0); 13694b84eec9SHong Zhang } 1370