xref: /petsc/src/ts/impls/multirate/mprk.c (revision 7c0df07d3f4147bcc2e6db359e147dc3be5724a6)
14b84eec9SHong Zhang /*
24b84eec9SHong Zhang   Code for time stepping with the Partitioned Runge-Kutta method
34b84eec9SHong Zhang 
44b84eec9SHong Zhang   Notes:
54b84eec9SHong Zhang   1) The general system is written as
64b84eec9SHong Zhang      Udot = F(t,U) for nonsplit RHS multi-rate RK,
74b84eec9SHong Zhang      user should give the indexes for both slow and fast components;
84b84eec9SHong Zhang   2) The general system is written as
94b84eec9SHong Zhang      Usdot = Fs(t,Us,Uf)
104b84eec9SHong Zhang      Ufdot = Ff(t,Us,Uf) for split RHS multi-rate RK,
114b84eec9SHong Zhang      user should partioned RHS by themselves and also provide the indexes for both slow and fast components.
1219c2959aSHong Zhang   3) To correct The confusing terminology in the paper, we use 'slow method', 'slow buffer method' and 'fast method' to denote the methods applied to 'slow region', 'slow buffer region' and 'fast region' respectively. The 'slow method' in the original paper actually means the 'slow buffer method'.
1319c2959aSHong Zhang   4) Why does the buffer region have to be inside the slow region? The buffer region is treated with a slow method essentially. Applying the slow method to a region with a fast characteristic time scale is apparently not a good choice.
1419c2959aSHong Zhang 
1519c2959aSHong Zhang   Reference:
1619c2959aSHong Zhang   Emil M. Constantinescu, Adrian Sandu, Multirate Timestepping Methods for Hyperbolic Conservation Laws, Journal of Scientific Computing 2007
1719c2959aSHong Zhang 
184b84eec9SHong Zhang */
194b84eec9SHong Zhang 
204b84eec9SHong Zhang #include <petsc/private/tsimpl.h>                /*I   "petscts.h"   I*/
214b84eec9SHong Zhang #include <petscdm.h>
224b84eec9SHong Zhang 
2319c2959aSHong Zhang static TSMPRKType TSMPRKDefault = TSMPRK2A22;
244b84eec9SHong Zhang static PetscBool TSMPRKRegisterAllCalled;
254b84eec9SHong Zhang static PetscBool TSMPRKPackageInitialized;
264b84eec9SHong Zhang 
274b84eec9SHong Zhang typedef struct _MPRKTableau *MPRKTableau;
284b84eec9SHong Zhang struct _MPRKTableau {
294b84eec9SHong Zhang   char      *name;
304b84eec9SHong Zhang   PetscInt  order;                          /* Classical approximation order of the method i */
314b84eec9SHong Zhang   PetscInt  s;                              /* Number of stages */
3219c2959aSHong Zhang   PetscInt  np;                             /* Number of partitions */
334b84eec9SHong Zhang   PetscReal *Af,*bf,*cf;                    /* Tableau for fast components */
3419c2959aSHong Zhang   PetscReal *Amb,*bmb,*cmb;                 /* Tableau for medium components */
3519c2959aSHong Zhang   PetscInt  *rmb;                           /* Array of flags for repeated stages in medium method */
3619c2959aSHong Zhang   PetscReal *Asb,*bsb,*csb;                 /* Tableau for slow components */
3719c2959aSHong Zhang   PetscInt  *rsb;                           /* Array of flags for repeated staged in slow method*/
384b84eec9SHong Zhang };
394b84eec9SHong Zhang typedef struct _MPRKTableauLink *MPRKTableauLink;
404b84eec9SHong Zhang struct _MPRKTableauLink {
414b84eec9SHong Zhang   struct _MPRKTableau tab;
424b84eec9SHong Zhang   MPRKTableauLink     next;
434b84eec9SHong Zhang };
444b84eec9SHong Zhang static MPRKTableauLink MPRKTableauList;
454b84eec9SHong Zhang 
464b84eec9SHong Zhang typedef struct {
474b84eec9SHong Zhang   MPRKTableau         tableau;
484b84eec9SHong Zhang   TSMPRKMultirateType mprkmtype;
494b84eec9SHong Zhang   Vec                 *Y;                          /* States computed during the step                           */
50*7c0df07dSHong Zhang   Vec                 *YdotRHS;
514b84eec9SHong Zhang   Vec                 *YdotRHS_slow;               /* Function evaluations by slow tableau for slow components  */
5219c2959aSHong Zhang   Vec                 *YdotRHS_slowbuffer;         /* Function evaluations by slow tableau for slow components  */
5319c2959aSHong Zhang   Vec                 *YdotRHS_medium;             /* Function evaluations by slow tableau for slow components  */
5419c2959aSHong Zhang   Vec                 *YdotRHS_mediumbuffer;       /* Function evaluations by slow tableau for slow components  */
5519c2959aSHong Zhang   Vec                 *YdotRHS_fast;               /* Function evaluations by fast tableau for fast components  */
564b84eec9SHong Zhang   PetscScalar         *work_slow;                  /* Scalar work_slow by slow tableau                          */
5719c2959aSHong Zhang   PetscScalar         *work_slowbuffer;            /* Scalar work_slow by slow tableau                          */
5819c2959aSHong Zhang   PetscScalar         *work_medium;                /* Scalar work_slow by medium tableau                        */
5919c2959aSHong Zhang   PetscScalar         *work_mediumbuffer;          /* Scalar work_slow by medium tableau                        */
6019c2959aSHong Zhang   PetscScalar         *work_fast;                  /* Scalar work_fast by fast tableau                          */
614b84eec9SHong Zhang   PetscReal           stage_time;
624b84eec9SHong Zhang   TSStepStatus        status;
634b84eec9SHong Zhang   PetscReal           ptime;
644b84eec9SHong Zhang   PetscReal           time_step;
6519c2959aSHong Zhang   IS                  is_slow,is_slowbuffer,is_medium,is_mediumbuffer,is_fast;
6619c2959aSHong Zhang   TS                  subts_slow,subts_slowbuffer,subts_medium,subts_mediumbuffer,subts_fast;
674b84eec9SHong Zhang } TS_MPRK;
684b84eec9SHong Zhang 
6919c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau2(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[])
7019c2959aSHong Zhang {
7119c2959aSHong Zhang   PetscInt i,j,k,l;
7219c2959aSHong Zhang 
7319c2959aSHong Zhang   PetscFunctionBegin;
7419c2959aSHong Zhang   for (k=0; k<ratio; k++) {
7519c2959aSHong Zhang     /* diagonal blocks */
7619c2959aSHong Zhang     for (i=0; i<s; i++)
7719c2959aSHong Zhang       for (j=0; j<s; j++) {
7819c2959aSHong Zhang         A1[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j];
7919c2959aSHong Zhang         A2[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j]/ratio;
8019c2959aSHong Zhang       }
8119c2959aSHong Zhang     /* off diagonal blocks */
8219c2959aSHong Zhang     for (l=0; l<k; l++)
8319c2959aSHong Zhang       for (i=0; i<s; i++)
8419c2959aSHong Zhang         for (j=0; j<s; j++)
8519c2959aSHong Zhang           A2[(k*s+i)*ratio*s+l*s+j] = bbase[j]/ratio;
8619c2959aSHong Zhang     for (j=0; j<s; j++) {
8719c2959aSHong Zhang       b1[k*s+j] = bbase[j]/ratio;
8819c2959aSHong Zhang       b2[k*s+j] = bbase[j]/ratio;
8919c2959aSHong Zhang     }
9019c2959aSHong Zhang   }
9119c2959aSHong Zhang   PetscFunctionReturn(0);
9219c2959aSHong Zhang }
9319c2959aSHong Zhang 
9419c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau3(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[],PetscReal A3[],PetscReal b3[])
9519c2959aSHong Zhang {
9619c2959aSHong Zhang   PetscInt i,j,k,l,m,n;
9719c2959aSHong Zhang 
9819c2959aSHong Zhang   PetscFunctionBegin;
9919c2959aSHong Zhang   for (k=0; k<ratio; k++) { /* diagonal blocks of size ratio*s by ratio*s */
10019c2959aSHong Zhang     for (l=0; l<ratio; l++) /* diagonal sub-blocks of size s by s */
10119c2959aSHong Zhang       for (i=0; i<s; i++)
10219c2959aSHong Zhang         for (j=0; j<s; j++) {
10319c2959aSHong Zhang           A1[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j];
10419c2959aSHong Zhang           A2[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio;
10519c2959aSHong Zhang           A3[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio/ratio;
10619c2959aSHong Zhang         }
10719c2959aSHong Zhang     for (l=0; l<k; l++) /* off-diagonal blocks of size ratio*s by ratio*s */
10819c2959aSHong Zhang       for (m=0; m<ratio; m++)
10919c2959aSHong Zhang         for (n=0; n<ratio; n++)
11019c2959aSHong Zhang           for (i=0; i<s; i++)
11119c2959aSHong Zhang             for (j=0; j<s; j++) {
11219c2959aSHong Zhang                A2[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio;
11319c2959aSHong Zhang                A3[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio;
11419c2959aSHong Zhang             }
11519c2959aSHong Zhang     for (m=0; m<ratio; m++)
11619c2959aSHong Zhang       for (n=0; n<m; n++) /* off-diagonal sub-blocks of size s by s in the diagonal blocks */
11719c2959aSHong Zhang           for (i=0; i<s; i++)
11819c2959aSHong Zhang             for (j=0; j<s; j++)
11919c2959aSHong Zhang                A3[((k*ratio+m)*s+i)*ratio*ratio*s+(k*ratio+n)*s+j] = bbase[j]/ratio/ratio;
12019c2959aSHong Zhang     for (n=0; n<ratio; n++)
12119c2959aSHong Zhang       for (j=0; j<s; j++) {
12219c2959aSHong Zhang         b1[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio;
12319c2959aSHong Zhang         b2[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio;
12419c2959aSHong Zhang         b3[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio;
12519c2959aSHong Zhang       }
12619c2959aSHong Zhang   }
12719c2959aSHong Zhang   PetscFunctionReturn(0);
12819c2959aSHong Zhang }
12919c2959aSHong Zhang 
1304b84eec9SHong Zhang /*MC
13119c2959aSHong Zhang      TSMPRK2A22 - Second Order Partitioned Runge Kutta scheme based on RK2A.
1324b84eec9SHong Zhang 
13319c2959aSHong Zhang      This method has four stages for slow and fast parts. The refinement factor of the stepsize is 2.
13419c2959aSHong Zhang      r = 2, np = 2
1354b84eec9SHong Zhang      Options database:
13619c2959aSHong Zhang .     -ts_mprk_type 2a22
1374b84eec9SHong Zhang 
1384b84eec9SHong Zhang      Level: advanced
1394b84eec9SHong Zhang 
1404b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
1414b84eec9SHong Zhang M*/
1424b84eec9SHong Zhang /*MC
14319c2959aSHong Zhang      TSMPRK2A23 - Second Order Partitioned Runge Kutta scheme based on RK2A.
14419c2959aSHong Zhang 
14519c2959aSHong Zhang      This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 2.
14619c2959aSHong Zhang      r = 2, np = 3
14719c2959aSHong Zhang      Options database:
14819c2959aSHong Zhang .     -ts_mprk_type 2a23
14919c2959aSHong Zhang 
15019c2959aSHong Zhang      Level: advanced
15119c2959aSHong Zhang 
15219c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
15319c2959aSHong Zhang M*/
15419c2959aSHong Zhang /*MC
15519c2959aSHong Zhang      TSMPRK2A32 - Second Order Partitioned Runge Kutta scheme based on RK2A.
15619c2959aSHong Zhang 
15719c2959aSHong Zhang      This method has four stages for slow and fast parts. The refinement factor of the stepsize is 3.
15819c2959aSHong Zhang      r = 3, np = 2
15919c2959aSHong Zhang      Options database:
16019c2959aSHong Zhang .     -ts_mprk_type 2a32
16119c2959aSHong Zhang 
16219c2959aSHong Zhang      Level: advanced
16319c2959aSHong Zhang 
16419c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
16519c2959aSHong Zhang M*/
16619c2959aSHong Zhang /*MC
16719c2959aSHong Zhang      TSMPRK2A33 - Second Order Partitioned Runge Kutta scheme based on RK2A.
16819c2959aSHong Zhang 
16919c2959aSHong Zhang      This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 3.
17019c2959aSHong Zhang      r = 3, np = 3
17119c2959aSHong Zhang      Options database:
17219c2959aSHong Zhang .     -ts_mprk_type 2a33
17319c2959aSHong Zhang 
17419c2959aSHong Zhang      Level: advanced
17519c2959aSHong Zhang 
17619c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
17719c2959aSHong Zhang M*/
17819c2959aSHong Zhang /*MC
17919c2959aSHong Zhang      TSMPRK3P2M - Third Order Partitioned Runge Kutta scheme.
1804b84eec9SHong Zhang 
1814b84eec9SHong Zhang      This method has eight stages for both slow and fast parts.
1824b84eec9SHong Zhang 
1834b84eec9SHong Zhang      Options database:
1844b84eec9SHong Zhang .     -ts_mprk_type pm3  (put here temporarily)
1854b84eec9SHong Zhang 
1864b84eec9SHong Zhang      Level: advanced
1874b84eec9SHong Zhang 
1884b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
1894b84eec9SHong Zhang M*/
1904b84eec9SHong Zhang /*MC
1914b84eec9SHong Zhang      TSMPRKP2 - Second Order Partitioned Runge Kutta scheme.
1924b84eec9SHong Zhang 
1934b84eec9SHong Zhang      This method has five stages for both slow and fast parts.
1944b84eec9SHong Zhang 
1954b84eec9SHong Zhang      Options database:
1964b84eec9SHong Zhang .     -ts_mprk_type p2
1974b84eec9SHong Zhang 
1984b84eec9SHong Zhang      Level: advanced
1994b84eec9SHong Zhang 
2004b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
2014b84eec9SHong Zhang M*/
2024b84eec9SHong Zhang /*MC
2034b84eec9SHong Zhang      TSMPRKP3 - Third Order Partitioned Runge Kutta scheme.
2044b84eec9SHong Zhang 
2054b84eec9SHong Zhang      This method has ten stages for both slow and fast parts.
2064b84eec9SHong Zhang 
2074b84eec9SHong Zhang      Options database:
2084b84eec9SHong Zhang .     -ts_mprk_type p3
2094b84eec9SHong Zhang 
2104b84eec9SHong Zhang      Level: advanced
2114b84eec9SHong Zhang 
2124b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType()
2134b84eec9SHong Zhang M*/
2144b84eec9SHong Zhang 
2154b84eec9SHong Zhang /*@C
2164b84eec9SHong Zhang   TSMPRKRegisterAll - Registers all of the Partirioned Runge-Kutta explicit methods in TSMPRK
2174b84eec9SHong Zhang 
2184b84eec9SHong Zhang   Not Collective, but should be called by all processes which will need the schemes to be registered
2194b84eec9SHong Zhang 
2204b84eec9SHong Zhang   Level: advanced
2214b84eec9SHong Zhang 
2224b84eec9SHong Zhang .keywords: TS, TSMPRK, register, all
2234b84eec9SHong Zhang 
2244b84eec9SHong Zhang .seealso:  TSMPRKRegisterDestroy()
2254b84eec9SHong Zhang @*/
2264b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterAll(void)
2274b84eec9SHong Zhang {
2284b84eec9SHong Zhang   PetscErrorCode ierr;
2294b84eec9SHong Zhang 
2304b84eec9SHong Zhang   PetscFunctionBegin;
2314b84eec9SHong Zhang   if (TSMPRKRegisterAllCalled) PetscFunctionReturn(0);
2324b84eec9SHong Zhang   TSMPRKRegisterAllCalled = PETSC_TRUE;
2334b84eec9SHong Zhang 
2344b84eec9SHong Zhang #define RC PetscRealConstant
2354b84eec9SHong Zhang   {
2364b84eec9SHong Zhang     const PetscReal
23719c2959aSHong Zhang       Abase[2][2] = {{0,0},
23819c2959aSHong Zhang                      {RC(1.0),0}},
23919c2959aSHong Zhang       bbase[2] = {RC(0.5),RC(0.5)};
24019c2959aSHong Zhang     PetscReal
24119c2959aSHong Zhang       Asb[4][4] = {{0}},Af[4][4] = {{0}},bsb[4] = {0},bf[4] = {0};
24219c2959aSHong Zhang     PetscInt
24319c2959aSHong Zhang       rsb[4] = {0,0,1,2};
24419c2959aSHong Zhang     ierr = TSMPRKGenerateTableau2(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr);
24519c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRK2A22,2,4,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr);
2464b84eec9SHong Zhang   }
24719c2959aSHong Zhang   {
24819c2959aSHong Zhang     const PetscReal
24919c2959aSHong Zhang       Abase[2][2] = {{0,0},
25019c2959aSHong Zhang                      {RC(1.0),0}},
25119c2959aSHong Zhang       bbase[2]    = {RC(0.5),RC(0.5)};
25219c2959aSHong Zhang     PetscReal
25319c2959aSHong Zhang       Asb[8][8] = {{0}},Amb[8][8] = {{0}},Af[8][8] = {{0}},bsb[8] ={0},bmb[8] = {0},bf[8] = {0};
25419c2959aSHong Zhang     PetscInt
25519c2959aSHong Zhang       rsb[8] = {0,0,1,2,1,2,1,2},rmb[8] = {0,0,1,2,0,0,5,6};
25619c2959aSHong Zhang     ierr = TSMPRKGenerateTableau3(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr);
25719c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRK2A23,2,8,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr);
25819c2959aSHong Zhang   }
25919c2959aSHong Zhang   {
26019c2959aSHong Zhang     const PetscReal
26119c2959aSHong Zhang       Abase[2][2] = {{0,0},
26219c2959aSHong Zhang                      {RC(1.0),0}},
26319c2959aSHong Zhang       bbase[2]    = {RC(0.5),RC(0.5)};
26419c2959aSHong Zhang     PetscReal
26519c2959aSHong Zhang       Asb[6][6] = {{0}},Af[6][6] = {{0}},bsb[6] = {0},bf[6] = {0};
26619c2959aSHong Zhang     PetscInt
26719c2959aSHong Zhang       rsb[6] = {0,0,1,2,1,2};
26819c2959aSHong Zhang     ierr = TSMPRKGenerateTableau2(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr);
26919c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRK2A32,2,6,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr);
27019c2959aSHong Zhang   }
27119c2959aSHong Zhang   {
27219c2959aSHong Zhang     const PetscReal
27319c2959aSHong Zhang       Abase[2][2] = {{0,0},
27419c2959aSHong Zhang                      {RC(1.0),0}},
27519c2959aSHong Zhang       bbase[2]    = {RC(0.5),RC(0.5)};
27619c2959aSHong Zhang     PetscReal
27719c2959aSHong Zhang       Asb[18][18] = {{0}},Amb[18][18] = {{0}},Af[18][18] = {{0}},bsb[18] ={0},bmb[18] = {0},bf[18] = {0};
27819c2959aSHong Zhang     PetscInt
27919c2959aSHong Zhang       rsb[18] = {0,0,1,2,1,2,1,2,1,2,1,2,1,2,1,2,1,2},rmb[18] = {0,0,1,2,1,2,0,0,7,8,7,8,0,0,13,14,13,14};
28019c2959aSHong Zhang     ierr = TSMPRKGenerateTableau3(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr);
28119c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRK2A33,2,18,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr);
28219c2959aSHong Zhang   }
28319c2959aSHong Zhang /*
28419c2959aSHong Zhang     PetscReal
28519c2959aSHong Zhang       Asb[8][8] = {{Abase[0][0],Abase[0][1],0,0,0,0,0,0},
28619c2959aSHong Zhang                    {Abase[1][0],Abase[1][1],0,0,0,0,0,0},
28719c2959aSHong Zhang                    {0,0,Abase[0][0],Abase[0][1],0,0,0,0},
28819c2959aSHong Zhang                    {0,0,Abase[1][0],Abase[1][1],0,0,0,0},
28919c2959aSHong Zhang                    {0,0,0,0,Abase[0][0],Abase[0][1],0,0},
29019c2959aSHong Zhang                    {0,0,0,0,Abase[1][0],Abase[1][1],0,0},
29119c2959aSHong Zhang                    {0,0,0,0,0,0,Abase[0][0],Abase[0][1]},
29219c2959aSHong Zhang                    {0,0,0,0,0,0,Abase[1][0],Abase[1][1]}},
29319c2959aSHong Zhang       Amb[8][8] = {{Abase[0][0]/m,Abase[0][1]/m,0,0,0,0,0,0},
29419c2959aSHong Zhang                    {Abase[1][0]/m,Abase[1][1]/m,0,0,0,0,0,0},
29519c2959aSHong Zhang                    {0,0,Abase[0][0]/m,Abase[0][1]/m,0,0,0,0},
29619c2959aSHong Zhang                    {0,0,Abase[1][0]/m,Abase[1][1]/m,0,0,0,0},
29719c2959aSHong Zhang                    {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[0][0]/m,Abase[0][1]/m,0,0},
29819c2959aSHong Zhang                    {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[1][0]/m,Abase[1][1]/m,0,0},
29919c2959aSHong Zhang                    {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[0][0]/m,Abase[0][1]/m},
30019c2959aSHong Zhang                    {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[1][0]/m,Abase[1][1]/m}},
30119c2959aSHong Zhang       Af[8][8] = {{Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0,0,0},
30219c2959aSHong Zhang                    {Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0,0,0},
30319c2959aSHong Zhang                    {0,0,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0},
30419c2959aSHong Zhang                    {0,0,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0},
30519c2959aSHong Zhang                    {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0},
30619c2959aSHong Zhang                    {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0},
30719c2959aSHong Zhang                    {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m,Abase[0][1]/m},
30819c2959aSHong Zhang                    {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m,Abase[1][1]/m}},
30919c2959aSHong Zhang       bsb[8]    = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m},
31019c2959aSHong Zhang       bmb[8]    = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m,bbase[1]/m/m},
31119c2959aSHong Zhang       bf[8]     = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m,bbase[0]/m/m,bbase[1]/m/m},
31219c2959aSHong Zhang */
3134b84eec9SHong Zhang   /*{
3144b84eec9SHong Zhang       const PetscReal
3154b84eec9SHong Zhang         As[8][8] = {{0,0,0,0,0,0,0,0},
3164b84eec9SHong Zhang                     {RC(1.0)/RC(2.0),0,0,0,0,0,0,0},
3174b84eec9SHong Zhang                     {RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0,0,0,0,0},
3184b84eec9SHong Zhang                     {RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0,0},
3194b84eec9SHong Zhang                     {0,0,0,0,0,0,0,0},
3204b84eec9SHong Zhang                     {0,0,0,0,RC(1.0)/RC(2.0),0,0,0},
3214b84eec9SHong Zhang                     {0,0,0,0,RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0},
3224b84eec9SHong Zhang                     {0,0,0,0,RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0}},
3234b84eec9SHong Zhang          A[8][8] = {{0,0,0,0,0,0,0,0},
3244b84eec9SHong Zhang                     {RC(1.0)/RC(4.0),0,0,0,0,0,0,0},
3254b84eec9SHong Zhang                     {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0},
3264b84eec9SHong Zhang                     {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0},
3274b84eec9SHong Zhang                     {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0},
3284b84eec9SHong Zhang                     {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(4.0),0,0,0},
3294b84eec9SHong Zhang                     {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0},
3304b84eec9SHong Zhang                     {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0}},
3314b84eec9SHong Zhang           bs[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)},
3324b84eec9SHong Zhang            b[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)};
3334b84eec9SHong Zhang            ierr = TSMPRKRegister(TSMPRKPM3,3,8,&As[0][0],bs,NULL,&A[0][0],b,NULL);CHKERRQ(ierr);
3344b84eec9SHong Zhang   }*/
3354b84eec9SHong Zhang 
3364b84eec9SHong Zhang   {
3374b84eec9SHong Zhang     const PetscReal
33819c2959aSHong Zhang       Asb[5][5] = {{0,0,0,0,0},
3394b84eec9SHong Zhang                    {RC(1.0)/RC(2.0),0,0,0,0},
3404b84eec9SHong Zhang                    {RC(1.0)/RC(2.0),0,0,0,0},
3414b84eec9SHong Zhang                    {RC(1.0),0,0,0,0},
3424b84eec9SHong Zhang                    {RC(1.0),0,0,0,0}},
34319c2959aSHong Zhang       Af[5][5]  = {{0,0,0,0,0},
3444b84eec9SHong Zhang                    {RC(1.0)/RC(2.0),0,0,0,0},
3454b84eec9SHong Zhang                    {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0,0,0},
3464b84eec9SHong Zhang                    {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(2.0),0,0},
3474b84eec9SHong Zhang                    {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0}},
34819c2959aSHong Zhang       bsb[5]    = {RC(1.0)/RC(2.0),0,0,0,RC(1.0)/RC(2.0)},
34919c2959aSHong Zhang       bf[5]     = {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0};
35019c2959aSHong Zhang     const PetscInt
35119c2959aSHong Zhang       rsb[5]    = {0,0,2,0,4};
35219c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRKP2,2,5,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr);
3534b84eec9SHong Zhang   }
3544b84eec9SHong Zhang 
3554b84eec9SHong Zhang   {
3564b84eec9SHong Zhang     const PetscReal
35719c2959aSHong Zhang       Asb[10][10] = {{0,0,0,0,0,0,0,0,0,0},
3584b84eec9SHong Zhang                      {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0},
3594b84eec9SHong Zhang                      {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0},
3604b84eec9SHong Zhang                      {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0},
3614b84eec9SHong Zhang                      {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0},
3624b84eec9SHong Zhang                      {RC(-1.0)/RC(6.0),0,0,0,RC(2.0)/RC(3.0),0,0,0,0,0},
3634b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0},
3644b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0},
3654b84eec9SHong Zhang                      {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0},
3664b84eec9SHong Zhang                      {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0}},
36719c2959aSHong Zhang       Af[10][10]  = {{0,0,0,0,0,0,0,0,0,0},
3684b84eec9SHong Zhang                      {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0},
3694b84eec9SHong Zhang                      {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0,0,0},
3704b84eec9SHong Zhang                      {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0,0,0},
3714b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0},
3724b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0},
3734b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(4.0),0,0,0,0},
3744b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0},
3754b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0},
3764b84eec9SHong Zhang                      {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0}},
37719c2959aSHong Zhang       bsb[10]     = {RC(1.0)/RC(6.0),0,0,0,RC(1.0)/RC(3.0),RC(1.0)/RC(3.0),0,0,0,RC(1.0)/RC(6.0)},
37819c2959aSHong Zhang       bf[10]      = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0};
37919c2959aSHong Zhang     const PetscInt
38019c2959aSHong Zhang       rsb[10]     = {0,0,2,0,4,0,0,7,0,9};
38119c2959aSHong Zhang     ierr = TSMPRKRegister(TSMPRKP3,3,10,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr);
3824b84eec9SHong Zhang   }
3834b84eec9SHong Zhang #undef RC
3844b84eec9SHong Zhang   PetscFunctionReturn(0);
3854b84eec9SHong Zhang }
3864b84eec9SHong Zhang 
3874b84eec9SHong Zhang /*@C
3884b84eec9SHong Zhang    TSMPRKRegisterDestroy - Frees the list of schemes that were registered by TSMPRKRegister().
3894b84eec9SHong Zhang 
3904b84eec9SHong Zhang    Not Collective
3914b84eec9SHong Zhang 
3924b84eec9SHong Zhang    Level: advanced
3934b84eec9SHong Zhang 
3944b84eec9SHong Zhang .keywords: TSMPRK, register, destroy
3954b84eec9SHong Zhang .seealso: TSMPRKRegister(), TSMPRKRegisterAll()
3964b84eec9SHong Zhang @*/
3974b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterDestroy(void)
3984b84eec9SHong Zhang {
3994b84eec9SHong Zhang   PetscErrorCode ierr;
4004b84eec9SHong Zhang   MPRKTableauLink link;
4014b84eec9SHong Zhang 
4024b84eec9SHong Zhang   PetscFunctionBegin;
4034b84eec9SHong Zhang   while ((link = MPRKTableauList)) {
4044b84eec9SHong Zhang     MPRKTableau t = &link->tab;
4054b84eec9SHong Zhang     MPRKTableauList = link->next;
40619c2959aSHong Zhang     ierr = PetscFree3(t->Asb,t->bsb,t->csb);CHKERRQ(ierr);
40719c2959aSHong Zhang     ierr = PetscFree3(t->Amb,t->bmb,t->cmb);CHKERRQ(ierr);
4084b84eec9SHong Zhang     ierr = PetscFree3(t->Af,t->bf,t->cf);CHKERRQ(ierr);
40919c2959aSHong Zhang     ierr = PetscFree2(t->rsb,t->rmb);CHKERRQ(ierr);
4104b84eec9SHong Zhang     ierr = PetscFree (t->name);CHKERRQ(ierr);
4114b84eec9SHong Zhang     ierr = PetscFree (link);CHKERRQ(ierr);
4124b84eec9SHong Zhang   }
4134b84eec9SHong Zhang   TSMPRKRegisterAllCalled = PETSC_FALSE;
4144b84eec9SHong Zhang   PetscFunctionReturn(0);
4154b84eec9SHong Zhang }
4164b84eec9SHong Zhang 
4174b84eec9SHong Zhang /*@C
4184b84eec9SHong Zhang   TSMPRKInitializePackage - This function initializes everything in the TSMPRK package. It is called
4194b84eec9SHong Zhang   from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_MPRK()
4204b84eec9SHong Zhang   when using static libraries.
4214b84eec9SHong Zhang 
4224b84eec9SHong Zhang   Level: developer
4234b84eec9SHong Zhang 
4244b84eec9SHong Zhang .keywords: TS, TSMPRK, initialize, package
4254b84eec9SHong Zhang .seealso: PetscInitialize()
4264b84eec9SHong Zhang @*/
4274b84eec9SHong Zhang PetscErrorCode TSMPRKInitializePackage(void)
4284b84eec9SHong Zhang {
4294b84eec9SHong Zhang   PetscErrorCode ierr;
4304b84eec9SHong Zhang 
4314b84eec9SHong Zhang   PetscFunctionBegin;
4324b84eec9SHong Zhang   if (TSMPRKPackageInitialized) PetscFunctionReturn(0);
4334b84eec9SHong Zhang   TSMPRKPackageInitialized = PETSC_TRUE;
4344b84eec9SHong Zhang   ierr = TSMPRKRegisterAll();CHKERRQ(ierr);
4354b84eec9SHong Zhang   ierr = PetscRegisterFinalize(TSMPRKFinalizePackage);CHKERRQ(ierr);
4364b84eec9SHong Zhang   PetscFunctionReturn(0);
4374b84eec9SHong Zhang }
4384b84eec9SHong Zhang 
4394b84eec9SHong Zhang /*@C
4404b84eec9SHong Zhang   TSRKFinalizePackage - This function destroys everything in the TSMPRK package. It is
4414b84eec9SHong Zhang   called from PetscFinalize().
4424b84eec9SHong Zhang 
4434b84eec9SHong Zhang   Level: developer
4444b84eec9SHong Zhang 
4454b84eec9SHong Zhang .keywords: Petsc, destroy, package
4464b84eec9SHong Zhang .seealso: PetscFinalize()
4474b84eec9SHong Zhang @*/
4484b84eec9SHong Zhang PetscErrorCode TSMPRKFinalizePackage(void)
4494b84eec9SHong Zhang {
4504b84eec9SHong Zhang   PetscErrorCode ierr;
4514b84eec9SHong Zhang 
4524b84eec9SHong Zhang   PetscFunctionBegin;
4534b84eec9SHong Zhang   TSMPRKPackageInitialized = PETSC_FALSE;
4544b84eec9SHong Zhang   ierr = TSMPRKRegisterDestroy();CHKERRQ(ierr);
4554b84eec9SHong Zhang   PetscFunctionReturn(0);
4564b84eec9SHong Zhang }
4574b84eec9SHong Zhang 
4584b84eec9SHong Zhang /*@C
4594b84eec9SHong Zhang    TSMPRKRegister - register a MPRK scheme by providing the entries in the Butcher tableau
4604b84eec9SHong Zhang 
4614b84eec9SHong Zhang    Not Collective, but the same schemes should be registered on all processes on which they will be used
4624b84eec9SHong Zhang 
4634b84eec9SHong Zhang    Input Parameters:
4644b84eec9SHong Zhang +  name - identifier for method
4654b84eec9SHong Zhang .  order - approximation order of method
4664b84eec9SHong Zhang .  s  - number of stages, this is the dimension of the matrices below
4674b84eec9SHong Zhang .  Af - stage coefficients for fast components(dimension s*s, row-major)
4684b84eec9SHong Zhang .  bf - step completion table for fast components(dimension s)
4694b84eec9SHong Zhang .  cf - abscissa for fast components(dimension s)
4704b84eec9SHong Zhang .  As - stage coefficients for slow components(dimension s*s, row-major)
4714b84eec9SHong Zhang .  bs - step completion table for slow components(dimension s)
4724b84eec9SHong Zhang -  cs - abscissa for slow components(dimension s)
4734b84eec9SHong Zhang 
4744b84eec9SHong Zhang    Notes:
4754b84eec9SHong Zhang    Several MPRK methods are provided, this function is only needed to create new methods.
4764b84eec9SHong Zhang 
4774b84eec9SHong Zhang    Level: advanced
4784b84eec9SHong Zhang 
4794b84eec9SHong Zhang .keywords: TS, register
4804b84eec9SHong Zhang 
4814b84eec9SHong Zhang .seealso: TSMPRK
4824b84eec9SHong Zhang @*/
4834b84eec9SHong Zhang PetscErrorCode TSMPRKRegister(TSMPRKType name,PetscInt order,PetscInt s,
48419c2959aSHong Zhang                               const PetscReal Asb[],const PetscReal bsb[],const PetscReal csb[],const PetscInt rsb[],
48519c2959aSHong Zhang                               const PetscReal Amb[],const PetscReal bmb[],const PetscReal cmb[],const PetscInt rmb[],
4864b84eec9SHong Zhang                               const PetscReal Af[],const PetscReal bf[],const PetscReal cf[])
4874b84eec9SHong Zhang {
4884b84eec9SHong Zhang   MPRKTableauLink link;
4894b84eec9SHong Zhang   MPRKTableau     t;
4904b84eec9SHong Zhang   PetscInt        i,j;
4914b84eec9SHong Zhang   PetscErrorCode  ierr;
4924b84eec9SHong Zhang 
4934b84eec9SHong Zhang   PetscFunctionBegin;
4944b84eec9SHong Zhang   PetscValidCharPointer(name,1);
49519c2959aSHong Zhang   PetscValidRealPointer(Asb,4);
49619c2959aSHong Zhang   if (bsb) PetscValidRealPointer(bsb,5);
49719c2959aSHong Zhang   if (csb) PetscValidRealPointer(csb,6);
49819c2959aSHong Zhang   if (rsb) PetscValidRealPointer(rsb,7);
49919c2959aSHong Zhang   if (Amb) PetscValidRealPointer(Amb,8);
50019c2959aSHong Zhang   if (bmb) PetscValidRealPointer(bmb,9);
50119c2959aSHong Zhang   if (cmb) PetscValidRealPointer(cmb,10);
50219c2959aSHong Zhang   if (rmb) PetscValidRealPointer(rmb,11);
50319c2959aSHong Zhang   PetscValidRealPointer(Af,12);
5044b84eec9SHong Zhang   if (bf) PetscValidRealPointer(bf,8);
5054b84eec9SHong Zhang   if (cf) PetscValidRealPointer(cf,9);
5064b84eec9SHong Zhang 
5074b84eec9SHong Zhang   ierr = PetscNew(&link);CHKERRQ(ierr);
5084b84eec9SHong Zhang   t = &link->tab;
5094b84eec9SHong Zhang 
5104b84eec9SHong Zhang   ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr);
5114b84eec9SHong Zhang   t->order = order;
5124b84eec9SHong Zhang   t->s  = s;
51319c2959aSHong Zhang   t->np = 2;
5144b84eec9SHong Zhang   ierr = PetscMalloc3(s*s,&t->Af,s,&t->bf,s,&t->cf);CHKERRQ(ierr);
5154b84eec9SHong Zhang   ierr = PetscMemcpy(t->Af,Af,s*s*sizeof(Af[0]));CHKERRQ(ierr);
5164b84eec9SHong Zhang   if (bf) {
5174b84eec9SHong Zhang     ierr = PetscMemcpy(t->bf,bf,s*sizeof(bf[0]));CHKERRQ(ierr);
51819c2959aSHong Zhang   } else
5194b84eec9SHong Zhang     for (i=0; i<s; i++) t->bf[i] = Af[(s-1)*s+i];
5204b84eec9SHong Zhang   if (cf) {
5214b84eec9SHong Zhang     ierr = PetscMemcpy(t->cf,cf,s*sizeof(cf[0]));CHKERRQ(ierr);
52219c2959aSHong Zhang   } else {
5234b84eec9SHong Zhang     for (i=0; i<s; i++)
5244b84eec9SHong Zhang       for (j=0,t->cf[i]=0; j<s; j++)
5254b84eec9SHong Zhang         t->cf[i] += Af[i*s+j];
5264b84eec9SHong Zhang   }
52719c2959aSHong Zhang 
52819c2959aSHong Zhang   if (Amb) {
52919c2959aSHong Zhang     t->np = 3;
53019c2959aSHong Zhang     ierr = PetscMalloc3(s*s,&t->Amb,s,&t->bmb,s,&t->cmb);CHKERRQ(ierr);
53119c2959aSHong Zhang     ierr = PetscCalloc1(s,&t->rmb);CHKERRQ(ierr);
53219c2959aSHong Zhang     ierr = PetscMemcpy(t->Amb,Amb,s*s*sizeof(Amb[0]));CHKERRQ(ierr);
53319c2959aSHong Zhang     if (bmb) {
53419c2959aSHong Zhang       ierr = PetscMemcpy(t->bmb,bmb,s*sizeof(bmb[0]));CHKERRQ(ierr);
53519c2959aSHong Zhang     } else {
53619c2959aSHong Zhang       for (i=0; i<s; i++) t->bmb[i] = Amb[(s-1)*s+i];
5374b84eec9SHong Zhang     }
53819c2959aSHong Zhang     if (cmb) {
53919c2959aSHong Zhang       ierr = PetscMemcpy(t->cmb,cmb,s*sizeof(cmb[0]));CHKERRQ(ierr);
54019c2959aSHong Zhang     } else {
5414b84eec9SHong Zhang       for (i=0; i<s; i++)
54219c2959aSHong Zhang         for (j=0,t->cmb[i]=0; j<s; j++)
54319c2959aSHong Zhang           t->cmb[i] += Amb[i*s+j];
54419c2959aSHong Zhang     }
54519c2959aSHong Zhang     if (rmb) {
54619c2959aSHong Zhang       ierr = PetscMemcpy(t->rmb,rmb,s*sizeof(rmb[0]));CHKERRQ(ierr);
54719c2959aSHong Zhang     }
54819c2959aSHong Zhang   }
54919c2959aSHong Zhang 
55019c2959aSHong Zhang   ierr = PetscMalloc3(s*s,&t->Asb,s,&t->bsb,s,&t->csb);CHKERRQ(ierr);
55119c2959aSHong Zhang   ierr = PetscMemcpy(t->Asb,Asb,s*s*sizeof(Asb[0]));CHKERRQ(ierr);
55219c2959aSHong Zhang   ierr = PetscCalloc1(s,&t->rsb);CHKERRQ(ierr);
55319c2959aSHong Zhang   if (bsb) {
55419c2959aSHong Zhang     ierr = PetscMemcpy(t->bsb,bsb,s*sizeof(bsb[0]));CHKERRQ(ierr);
55519c2959aSHong Zhang   } else
55619c2959aSHong Zhang     for (i=0; i<s; i++) t->bsb[i] = Asb[(s-1)*s+i];
55719c2959aSHong Zhang   if (csb) {
55819c2959aSHong Zhang     ierr = PetscMemcpy(t->csb,csb,s*sizeof(csb[0]));CHKERRQ(ierr);
55919c2959aSHong Zhang   } else {
56019c2959aSHong Zhang     for (i=0; i<s; i++)
56119c2959aSHong Zhang       for (j=0,t->csb[i]=0; j<s; j++)
56219c2959aSHong Zhang         t->csb[i] += Asb[i*s+j];
56319c2959aSHong Zhang   }
56419c2959aSHong Zhang   if (rsb) {
56519c2959aSHong Zhang     ierr = PetscMemcpy(t->rsb,rsb,s*sizeof(rsb[0]));CHKERRQ(ierr);
5664b84eec9SHong Zhang   }
5674b84eec9SHong Zhang   link->next = MPRKTableauList;
5684b84eec9SHong Zhang   MPRKTableauList = link;
5694b84eec9SHong Zhang   PetscFunctionReturn(0);
5704b84eec9SHong Zhang }
5714b84eec9SHong Zhang 
5724b84eec9SHong Zhang static PetscErrorCode TSMPRKSetSplits(TS ts)
5734b84eec9SHong Zhang {
5744b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
57519c2959aSHong Zhang   MPRKTableau    tab = mprk->tableau;
5764b84eec9SHong Zhang   DM             dm,subdm,newdm;
5774b84eec9SHong Zhang   PetscErrorCode ierr;
5784b84eec9SHong Zhang 
5794b84eec9SHong Zhang   PetscFunctionBegin;
5804b84eec9SHong Zhang   ierr = TSRHSSplitGetSubTS(ts,"slow",&mprk->subts_slow);CHKERRQ(ierr);
5814b84eec9SHong Zhang   ierr = TSRHSSplitGetSubTS(ts,"fast",&mprk->subts_fast);CHKERRQ(ierr);
5824b84eec9SHong Zhang   if (!mprk->subts_slow || !mprk->subts_fast) SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up the RHSFunctions for 'slow' and 'fast' components using TSRHSSplitSetRHSFunction() or calling TSSetRHSFunction() for each sub-TS");
5834b84eec9SHong Zhang 
58419c2959aSHong Zhang   /* Only copy the DM */
5854b84eec9SHong Zhang   ierr = TSGetDM(ts,&dm);CHKERRQ(ierr);
58619c2959aSHong Zhang 
58719c2959aSHong Zhang   ierr = TSRHSSplitGetSubTS(ts,"slowbuffer",&mprk->subts_slowbuffer);CHKERRQ(ierr);
58819c2959aSHong Zhang   if (!mprk->subts_slowbuffer) {
58919c2959aSHong Zhang     mprk->subts_slowbuffer = mprk->subts_slow;
59019c2959aSHong Zhang     mprk->subts_slow       = NULL;
59119c2959aSHong Zhang   }
59219c2959aSHong Zhang   if (mprk->subts_slow) {
5934b84eec9SHong Zhang     ierr = DMClone(dm,&newdm);CHKERRQ(ierr);
5944b84eec9SHong Zhang     ierr = TSGetDM(mprk->subts_slow,&subdm);CHKERRQ(ierr);
5954b84eec9SHong Zhang     ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr);
5964b84eec9SHong Zhang     ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr);
5974b84eec9SHong Zhang     ierr = TSSetDM(mprk->subts_slow,newdm);CHKERRQ(ierr);
5984b84eec9SHong Zhang     ierr = DMDestroy(&newdm);CHKERRQ(ierr);
59919c2959aSHong Zhang   }
60019c2959aSHong Zhang   ierr = DMClone(dm,&newdm);CHKERRQ(ierr);
60119c2959aSHong Zhang   ierr = TSGetDM(mprk->subts_slowbuffer,&subdm);CHKERRQ(ierr);
60219c2959aSHong Zhang   ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr);
60319c2959aSHong Zhang   ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr);
60419c2959aSHong Zhang   ierr = TSSetDM(mprk->subts_slowbuffer,newdm);CHKERRQ(ierr);
60519c2959aSHong Zhang   ierr = DMDestroy(&newdm);CHKERRQ(ierr);
60619c2959aSHong Zhang 
60719c2959aSHong Zhang   ierr = DMClone(dm,&newdm);CHKERRQ(ierr);
60819c2959aSHong Zhang   ierr = TSGetDM(mprk->subts_fast,&subdm);CHKERRQ(ierr);
60919c2959aSHong Zhang   ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr);
61019c2959aSHong Zhang   ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr);
61119c2959aSHong Zhang   ierr = TSSetDM(mprk->subts_fast,newdm);CHKERRQ(ierr);
61219c2959aSHong Zhang   ierr = DMDestroy(&newdm);CHKERRQ(ierr);
61319c2959aSHong Zhang 
61419c2959aSHong Zhang   if (tab->np == 3) {
61519c2959aSHong Zhang     ierr = TSRHSSplitGetSubTS(ts,"medium",&mprk->subts_medium);CHKERRQ(ierr);
61619c2959aSHong Zhang     ierr = TSRHSSplitGetSubTS(ts,"mediumbuffer",&mprk->subts_mediumbuffer);CHKERRQ(ierr);
61719c2959aSHong Zhang     if (mprk->subts_medium && !mprk->subts_mediumbuffer) {
61819c2959aSHong Zhang       mprk->subts_mediumbuffer = mprk->subts_medium;
61919c2959aSHong Zhang       mprk->subts_medium       = NULL;
62019c2959aSHong Zhang     }
62119c2959aSHong Zhang     if (mprk->subts_medium) {
62219c2959aSHong Zhang       ierr = DMClone(dm,&newdm);CHKERRQ(ierr);
62319c2959aSHong Zhang       ierr = TSGetDM(mprk->subts_medium,&subdm);CHKERRQ(ierr);
62419c2959aSHong Zhang       ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr);
62519c2959aSHong Zhang       ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr);
62619c2959aSHong Zhang       ierr = TSSetDM(mprk->subts_medium,newdm);CHKERRQ(ierr);
62719c2959aSHong Zhang       ierr = DMDestroy(&newdm);CHKERRQ(ierr);
62819c2959aSHong Zhang     }
62919c2959aSHong Zhang     ierr = DMClone(dm,&newdm);CHKERRQ(ierr);
63019c2959aSHong Zhang     ierr = TSGetDM(mprk->subts_mediumbuffer,&subdm);CHKERRQ(ierr);
63119c2959aSHong Zhang     ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr);
63219c2959aSHong Zhang     ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr);
63319c2959aSHong Zhang     ierr = TSSetDM(mprk->subts_mediumbuffer,newdm);CHKERRQ(ierr);
63419c2959aSHong Zhang     ierr = DMDestroy(&newdm);CHKERRQ(ierr);
63519c2959aSHong Zhang   }
6364b84eec9SHong Zhang   PetscFunctionReturn(0);
6374b84eec9SHong Zhang }
6384b84eec9SHong Zhang 
6394b84eec9SHong Zhang /*
6404b84eec9SHong Zhang  This if for nonsplit RHS MPRK
6414b84eec9SHong Zhang  The step completion formula is
6424b84eec9SHong Zhang 
6434b84eec9SHong Zhang  x1 = x0 + h b^T YdotRHS
6444b84eec9SHong Zhang 
6454b84eec9SHong Zhang */
6464b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRK(TS ts,PetscInt order,Vec X,PetscBool *done)
6474b84eec9SHong Zhang {
6484b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
6494b84eec9SHong Zhang   MPRKTableau    tab = mprk->tableau;
650*7c0df07dSHong Zhang   PetscScalar    *wf = mprk->work_fast;
6514b84eec9SHong Zhang   PetscReal      h = ts->time_step;
6524b84eec9SHong Zhang   PetscInt       s = tab->s,j;
6534b84eec9SHong Zhang   PetscErrorCode ierr;
6544b84eec9SHong Zhang 
6554b84eec9SHong Zhang   PetscFunctionBegin;
6564b84eec9SHong Zhang   for (j=0; j<s; j++) wf[j] = h*tab->bf[j];
657*7c0df07dSHong Zhang   ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);
658*7c0df07dSHong Zhang   ierr = VecMAXPY(X,s,wf,mprk->YdotRHS);CHKERRQ(ierr);
6594b84eec9SHong Zhang   PetscFunctionReturn(0);
6604b84eec9SHong Zhang }
6614b84eec9SHong Zhang 
6624b84eec9SHong Zhang static PetscErrorCode TSStep_MPRK(TS ts)
6634b84eec9SHong Zhang {
6644b84eec9SHong Zhang   TS_MPRK         *mprk = (TS_MPRK*)ts->data;
665*7c0df07dSHong Zhang   Vec             *Y = mprk->Y,*YdotRHS = mprk->YdotRHS,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer;
666*7c0df07dSHong Zhang   Vec             Yslow,Yslowbuffer,Yfast;
6674b84eec9SHong Zhang   MPRKTableau     tab = mprk->tableau;
6684b84eec9SHong Zhang   const PetscInt  s = tab->s;
66919c2959aSHong Zhang   const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb;
670*7c0df07dSHong Zhang   PetscScalar     *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer;
671*7c0df07dSHong Zhang   PetscInt        i,j,basestages;
6724b84eec9SHong Zhang   PetscReal       next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step;
6734b84eec9SHong Zhang   PetscErrorCode  ierr;
6744b84eec9SHong Zhang 
6754b84eec9SHong Zhang   PetscFunctionBegin;
6764b84eec9SHong Zhang   for (i=0; i<s; i++) {
6774b84eec9SHong Zhang     mprk->stage_time = t + h*cf[i];
6784b84eec9SHong Zhang     ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr);
679*7c0df07dSHong Zhang     ierr = VecCopy(ts->vec_sol, Y[i]);CHKERRQ(ierr);
6804b84eec9SHong Zhang 
681*7c0df07dSHong Zhang     /* slow buffer region */
68219c2959aSHong Zhang     for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j];
683*7c0df07dSHong Zhang     for (j=0; j<s; j++) {
684*7c0df07dSHong Zhang       ierr = VecGetSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr);
685*7c0df07dSHong Zhang     }
686*7c0df07dSHong Zhang     ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr);
687*7c0df07dSHong Zhang     ierr = VecMAXPY(Yslowbuffer,i,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
688*7c0df07dSHong Zhang     ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr);
689*7c0df07dSHong Zhang     for (j=0; j<s; j++) {
690*7c0df07dSHong Zhang       ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr);
691*7c0df07dSHong Zhang     }
692*7c0df07dSHong Zhang     /* slow region */
693*7c0df07dSHong Zhang     if (mprk->is_slow) {
694*7c0df07dSHong Zhang       basestages = 0;
695*7c0df07dSHong Zhang       for (j=0; j<i; j++)
696*7c0df07dSHong Zhang       {
697*7c0df07dSHong Zhang         if (!tab->rsb[j]) ws[tab->rsb[j]-1] += h*tab->Asb[i*s+j];
698*7c0df07dSHong Zhang         else ws[basestages++] = h*tab->Asb[i*s+j];
699*7c0df07dSHong Zhang       }
700*7c0df07dSHong Zhang       for (j=0; j<s; j++) {
701*7c0df07dSHong Zhang         ierr = VecGetSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr);
702*7c0df07dSHong Zhang       }
703*7c0df07dSHong Zhang       ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr);
704*7c0df07dSHong Zhang       ierr = VecMAXPY(Yslow,i,ws,mprk->YdotRHS_slow);CHKERRQ(ierr);
705*7c0df07dSHong Zhang       ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr);
706*7c0df07dSHong Zhang       for (j=0; j<s; j++) {
707*7c0df07dSHong Zhang         ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr);
708*7c0df07dSHong Zhang       }
709*7c0df07dSHong Zhang     }
7104b84eec9SHong Zhang 
711*7c0df07dSHong Zhang     /* fast region */
7124b84eec9SHong Zhang     for (j=0; j<i; j++) wf[j] = h*Af[i*s+j];
713*7c0df07dSHong Zhang     for (j=0; j<s; j++) {
714*7c0df07dSHong Zhang       ierr = VecGetSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr);
715*7c0df07dSHong Zhang     }
716*7c0df07dSHong Zhang     ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr);
717*7c0df07dSHong Zhang     ierr = VecMAXPY(Yfast,i,wf,mprk->YdotRHS_fast);CHKERRQ(ierr);
718*7c0df07dSHong Zhang     ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr);
719*7c0df07dSHong Zhang     for (j=0; j<s; j++) {
720*7c0df07dSHong Zhang       ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr);
721*7c0df07dSHong Zhang     }
722*7c0df07dSHong Zhang     if (tab->np == 3) {
723*7c0df07dSHong Zhang       Vec         *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer;
724*7c0df07dSHong Zhang       Vec         Ymedium,Ymediumbuffer;
725*7c0df07dSHong Zhang       PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer;
726*7c0df07dSHong Zhang       /* medium region */
727*7c0df07dSHong Zhang       if (mprk->is_medium) {
728*7c0df07dSHong Zhang         basestages = 0;
729*7c0df07dSHong Zhang         for (j=0; j<i; j++) {
730*7c0df07dSHong Zhang           if (!tab->rmb[j]) wm[tab->rmb[j]-1] += h*tab->Amb[i*s+j];
731*7c0df07dSHong Zhang           else wm[basestages++] = h*tab->Amb[i*s+j];
732*7c0df07dSHong Zhang         }
733*7c0df07dSHong Zhang         for (j=0; j<s; j++) {
734*7c0df07dSHong Zhang           ierr = VecGetSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr);
735*7c0df07dSHong Zhang         }
736*7c0df07dSHong Zhang         ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr);
737*7c0df07dSHong Zhang         ierr = VecMAXPY(Ymedium,i,wm,mprk->YdotRHS_medium);CHKERRQ(ierr);
738*7c0df07dSHong Zhang         ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr);
739*7c0df07dSHong Zhang         for (j=0; j<s; j++) {
740*7c0df07dSHong Zhang           ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr);
741*7c0df07dSHong Zhang         }
742*7c0df07dSHong Zhang       }
743*7c0df07dSHong Zhang       /* medium buffer region */
744*7c0df07dSHong Zhang       for (j=0; j<i; j++) wmb[j] = h*tab->Amb[i*s+j];
745*7c0df07dSHong Zhang       for (j=0; j<s; j++) {
746*7c0df07dSHong Zhang         ierr = VecGetSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr);
747*7c0df07dSHong Zhang       }
748*7c0df07dSHong Zhang       ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr);
749*7c0df07dSHong Zhang       ierr = VecMAXPY(Ymediumbuffer,i,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
750*7c0df07dSHong Zhang       ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr);
751*7c0df07dSHong Zhang       for (j=0; j<s; j++) {
752*7c0df07dSHong Zhang         ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr);
753*7c0df07dSHong Zhang       }
754*7c0df07dSHong Zhang     }
7554b84eec9SHong Zhang     ierr = TSPostStage(ts,mprk->stage_time,i,Y); CHKERRQ(ierr);
7564b84eec9SHong Zhang     /* compute the stage RHS by fast and slow tableau respectively */
757*7c0df07dSHong Zhang     ierr = TSComputeRHSFunction(ts,t+h*csb[i],Y[i],YdotRHS[i]);CHKERRQ(ierr);
7584b84eec9SHong Zhang   }
7594b84eec9SHong Zhang   ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr);
7604b84eec9SHong Zhang   ts->ptime += ts->time_step;
7614b84eec9SHong Zhang   ts->time_step = next_time_step;
7624b84eec9SHong Zhang   PetscFunctionReturn(0);
7634b84eec9SHong Zhang }
7644b84eec9SHong Zhang 
7654b84eec9SHong Zhang /*
7664b84eec9SHong Zhang  This if for partitioned RHS MPRK
7674b84eec9SHong Zhang  The step completion formula is
7684b84eec9SHong Zhang 
7694b84eec9SHong Zhang  x1 = x0 + h b^T YdotRHS
7704b84eec9SHong Zhang 
7714b84eec9SHong Zhang */
7724b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRKSPLIT(TS ts,PetscInt order,Vec X,PetscBool *done)
7734b84eec9SHong Zhang {
7744b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
7754b84eec9SHong Zhang   MPRKTableau    tab  = mprk->tableau;
77619c2959aSHong Zhang   Vec            Xslow,Xfast,Xslowbuffer; /* subvectors for slow and fast componets in X respectively */
77719c2959aSHong Zhang   PetscScalar    *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer;
7784b84eec9SHong Zhang   PetscReal      h = ts->time_step;
77919c2959aSHong Zhang   PetscInt       s = tab->s,j,basestages;
7804b84eec9SHong Zhang   PetscErrorCode ierr;
7814b84eec9SHong Zhang 
7824b84eec9SHong Zhang   PetscFunctionBegin;
7834b84eec9SHong Zhang   ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr);
78419c2959aSHong Zhang 
78519c2959aSHong Zhang   /* slow region */
78619c2959aSHong Zhang   if (mprk->is_slow) {
78719c2959aSHong Zhang     basestages = 0;
78819c2959aSHong Zhang     for (j=0; j<s; j++) {
78919c2959aSHong Zhang       if (!tab->rsb[j]) ws[tab->rsb[j]-1] += h*tab->bsb[j];
79019c2959aSHong Zhang       else ws[basestages++] = h*tab->bsb[j];
79119c2959aSHong Zhang     }
7924b84eec9SHong Zhang     ierr = VecGetSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr);
79319c2959aSHong Zhang     ierr = VecMAXPY(Xslow,basestages,ws,mprk->YdotRHS_slow);CHKERRQ(ierr);
79419c2959aSHong Zhang     ierr = VecRestoreSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr);
79519c2959aSHong Zhang   }
79619c2959aSHong Zhang 
79719c2959aSHong Zhang   /* slow buffer region */
79819c2959aSHong Zhang   for (j=0; j<s; j++) wsb[j] = h*tab->bsb[j];
79919c2959aSHong Zhang   ierr = VecGetSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr);
80019c2959aSHong Zhang   ierr = VecMAXPY(Xslowbuffer,s,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
80119c2959aSHong Zhang   ierr = VecRestoreSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr);
80219c2959aSHong Zhang 
80319c2959aSHong Zhang   if (tab->np == 3) {
80419c2959aSHong Zhang     Vec         Xmedium,Xmediumbuffer;
80519c2959aSHong Zhang     PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer;
80619c2959aSHong Zhang     /* medium region */
80719c2959aSHong Zhang     if (mprk->is_medium) {
80819c2959aSHong Zhang       basestages = 0;
80919c2959aSHong Zhang       for (j=0; j<s; j++) {
81019c2959aSHong Zhang         if (!tab->rmb[j]) wm[tab->rmb[j]-1] += h*tab->bmb[j];
81119c2959aSHong Zhang         else wm[basestages++] = h*tab->bmb[j];
81219c2959aSHong Zhang       }
81319c2959aSHong Zhang       ierr = VecGetSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr);
81419c2959aSHong Zhang       ierr = VecMAXPY(Xmedium,basestages,wm,mprk->YdotRHS_medium);CHKERRQ(ierr);
81519c2959aSHong Zhang       ierr = VecRestoreSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr);
81619c2959aSHong Zhang     }
81719c2959aSHong Zhang     /* medium buffer region */
81819c2959aSHong Zhang     for (j=0; j<s; j++) wmb[j] = h*tab->bmb[j];
81919c2959aSHong Zhang     ierr = VecGetSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr);
82019c2959aSHong Zhang     ierr = VecMAXPY(Xmediumbuffer,s,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
821*7c0df07dSHong Zhang 
82219c2959aSHong Zhang     ierr = VecRestoreSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr);
82319c2959aSHong Zhang   }
82419c2959aSHong Zhang   /* fast region */
82519c2959aSHong Zhang   for (j=0; j<s; j++) wf[j] = h*tab->bf[j];
8264b84eec9SHong Zhang   ierr = VecGetSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr);
8274b84eec9SHong Zhang   ierr = VecMAXPY(Xfast,s,wf,mprk->YdotRHS_fast);CHKERRQ(ierr);
82819c2959aSHong Zhang   ierr = VecRestoreSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr);
8294b84eec9SHong Zhang   PetscFunctionReturn(0);
8304b84eec9SHong Zhang }
8314b84eec9SHong Zhang 
8324b84eec9SHong Zhang static PetscErrorCode TSStep_MPRKSPLIT(TS ts)
8334b84eec9SHong Zhang {
8344b84eec9SHong Zhang   TS_MPRK         *mprk = (TS_MPRK*)ts->data;
8354b84eec9SHong Zhang   MPRKTableau     tab = mprk->tableau;
83619c2959aSHong Zhang   Vec             *Y = mprk->Y,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer;
83719c2959aSHong Zhang   Vec             Yslow,Yslowbuffer,Yfast; /* subvectors for slow and fast components in Y[i] respectively */
83819c2959aSHong Zhang   PetscInt        s = tab->s;
83919c2959aSHong Zhang   const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb;
84019c2959aSHong Zhang   PetscScalar     *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer;
84119c2959aSHong Zhang   PetscInt        i,j,basestages;
8424b84eec9SHong Zhang   PetscReal       next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step;
8434b84eec9SHong Zhang   PetscErrorCode  ierr;
8444b84eec9SHong Zhang 
8454b84eec9SHong Zhang   PetscFunctionBegin;
8464b84eec9SHong Zhang   for (i=0; i<s; i++) {
8474b84eec9SHong Zhang     mprk->stage_time = t + h*cf[i];
8484b84eec9SHong Zhang     ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr);
8494b84eec9SHong Zhang     /* calculate the stage value for fast and slow components respectively */
8504b84eec9SHong Zhang     ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr);
85119c2959aSHong Zhang     for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j];
85219c2959aSHong Zhang 
85319c2959aSHong Zhang     /* slow buffer region */
85419c2959aSHong Zhang     ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr);
85519c2959aSHong Zhang     ierr = VecMAXPY(Yslowbuffer,i,wsb,YdotRHS_slowbuffer);CHKERRQ(ierr);
85619c2959aSHong Zhang     ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr);
85719c2959aSHong Zhang     /* slow region */
85819c2959aSHong Zhang     if (!tab->rsb[i] && mprk->is_slow) { /* not a repeated stage */
85919c2959aSHong Zhang       basestages = 0;
86019c2959aSHong Zhang       for (j=0; j<i; j++) {
86119c2959aSHong Zhang         if (!tab->rsb[j]) ws[tab->rsb[j]-1] += h*Asb[i*s+j];
86219c2959aSHong Zhang         else ws[basestages++] = wsb[j];
86319c2959aSHong Zhang       }
8644b84eec9SHong Zhang       ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr);
8654b84eec9SHong Zhang       ierr = VecMAXPY(Yslow,i,ws,YdotRHS_slow);CHKERRQ(ierr);
8664b84eec9SHong Zhang       ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr);
86719c2959aSHong Zhang       /* only depends on the slow buffer region */
86819c2959aSHong Zhang       ierr = TSComputeRHSFunction(mprk->subts_slow,t+h*csb[i],Y[i],YdotRHS_slow[i]);CHKERRQ(ierr);
86919c2959aSHong Zhang     }
87019c2959aSHong Zhang 
87119c2959aSHong Zhang     /* fast region */
87219c2959aSHong Zhang     for (j=0; j<i; j++) wf[j] = h*Af[i*s+j];
87319c2959aSHong Zhang     ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr);
87419c2959aSHong Zhang     ierr = VecMAXPY(Yfast,i,wf,YdotRHS_fast);CHKERRQ(ierr);
8754b84eec9SHong Zhang     ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr);
87619c2959aSHong Zhang 
87719c2959aSHong Zhang     if (tab->np == 3) {
87819c2959aSHong Zhang       Vec *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer;
87919c2959aSHong Zhang       Vec Ymedium,Ymediumbuffer;
88019c2959aSHong Zhang       const PetscReal *Amb = tab->Amb,*cmb = tab->cmb;
88119c2959aSHong Zhang       PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer;
88219c2959aSHong Zhang 
88319c2959aSHong Zhang       for (j=0; j<i; j++) wmb[j] = h*Amb[i*s+j];
88419c2959aSHong Zhang       /* medium buffer region */
88519c2959aSHong Zhang       ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr);
88619c2959aSHong Zhang       ierr = VecMAXPY(Ymediumbuffer,i,wmb,YdotRHS_mediumbuffer);CHKERRQ(ierr);
88719c2959aSHong Zhang       ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr);
88819c2959aSHong Zhang       /* medium region */
88919c2959aSHong Zhang       if (!tab->rmb[i] && mprk->is_medium) { /* not a repeated stage */
89019c2959aSHong Zhang         basestages = 0;
89119c2959aSHong Zhang         for (j=0; j<i; j++) {
89219c2959aSHong Zhang           if (tab->rmb[j]) wm[tab->rmb[j]-1] += h*Amb[i*s+j];
89319c2959aSHong Zhang           else wm[basestages++] = wmb[j];
89419c2959aSHong Zhang         }
89519c2959aSHong Zhang         ierr = VecGetSubVector(Y[basestages],mprk->is_medium,&Ymedium);CHKERRQ(ierr);
89619c2959aSHong Zhang         ierr = VecMAXPY(Ymedium,i,wm,YdotRHS_medium);CHKERRQ(ierr);
89719c2959aSHong Zhang         ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr);
89819c2959aSHong Zhang         /* only depends on the medium buffer region and the slow buffer region */
89919c2959aSHong Zhang         ierr = TSComputeRHSFunction(mprk->subts_medium,t+h*cmb[i],Y[i],YdotRHS_medium[i]);CHKERRQ(ierr);
90019c2959aSHong Zhang       }
90119c2959aSHong Zhang       /* must be computed after fast region and slow region are updated in Y */
90219c2959aSHong Zhang       ierr = TSComputeRHSFunction(mprk->subts_mediumbuffer,t+h*cmb[i],Y[i],YdotRHS_mediumbuffer[i]);CHKERRQ(ierr);
90319c2959aSHong Zhang     }
90419c2959aSHong Zhang     /* must be computed after all regions are updated in Y */
90519c2959aSHong Zhang     ierr = TSComputeRHSFunction(mprk->subts_slowbuffer,t+h*csb[i],Y[i],YdotRHS_slowbuffer[i]);CHKERRQ(ierr);
906*7c0df07dSHong Zhang     ierr = TSComputeRHSFunction(mprk->subts_fast,t+h*cf[i],Y[i],YdotRHS_fast[i]);
9074b84eec9SHong Zhang   }
9084b84eec9SHong Zhang   ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr);
9094b84eec9SHong Zhang   ts->ptime += ts->time_step;
9104b84eec9SHong Zhang   ts->time_step = next_time_step;
9114b84eec9SHong Zhang   PetscFunctionReturn(0);
9124b84eec9SHong Zhang }
9134b84eec9SHong Zhang 
9144b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauReset(TS ts)
9154b84eec9SHong Zhang {
9164b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
9174b84eec9SHong Zhang   MPRKTableau    tab = mprk->tableau;
9184b84eec9SHong Zhang   PetscErrorCode ierr;
9194b84eec9SHong Zhang 
9204b84eec9SHong Zhang   PetscFunctionBegin;
9214b84eec9SHong Zhang   if (!tab) PetscFunctionReturn(0);
9224b84eec9SHong Zhang   ierr = PetscFree(mprk->work_fast);CHKERRQ(ierr);
9234b84eec9SHong Zhang   ierr = PetscFree(mprk->work_slow);CHKERRQ(ierr);
924*7c0df07dSHong Zhang   ierr = PetscFree(mprk->work_slowbuffer);CHKERRQ(ierr);
925*7c0df07dSHong Zhang   ierr = PetscFree(mprk->work_medium);CHKERRQ(ierr);
926*7c0df07dSHong Zhang   ierr = PetscFree(mprk->work_mediumbuffer);CHKERRQ(ierr);
9274b84eec9SHong Zhang   ierr = VecDestroyVecs(tab->s,&mprk->Y);CHKERRQ(ierr);
9284b84eec9SHong Zhang   if (mprk->mprkmtype == TSMPRKNONSPLIT) {
929*7c0df07dSHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS);CHKERRQ(ierr);
930*7c0df07dSHong Zhang     if (mprk->is_slow) {
931*7c0df07dSHong Zhang       ierr = PetscFree(mprk->YdotRHS_slow);CHKERRQ(ierr);
9324b84eec9SHong Zhang     }
933*7c0df07dSHong Zhang     ierr = PetscFree(mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
934*7c0df07dSHong Zhang     if (tab->np == 3) {
935*7c0df07dSHong Zhang       if (mprk->is_medium) {
936*7c0df07dSHong Zhang         ierr = PetscFree(mprk->YdotRHS_medium);CHKERRQ(ierr);
937*7c0df07dSHong Zhang       }
938*7c0df07dSHong Zhang       ierr = PetscFree(mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
939*7c0df07dSHong Zhang     }
940*7c0df07dSHong Zhang     ierr = PetscFree(mprk->YdotRHS_fast);CHKERRQ(ierr);
941*7c0df07dSHong Zhang 
942*7c0df07dSHong Zhang   } else {
9434b84eec9SHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr);
9444b84eec9SHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr);
945*7c0df07dSHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
946*7c0df07dSHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr);
947*7c0df07dSHong Zhang     ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
948*7c0df07dSHong Zhang   }
9494b84eec9SHong Zhang   PetscFunctionReturn(0);
9504b84eec9SHong Zhang }
9514b84eec9SHong Zhang 
9524b84eec9SHong Zhang static PetscErrorCode TSReset_MPRK(TS ts)
9534b84eec9SHong Zhang {
9544b84eec9SHong Zhang   PetscErrorCode ierr;
9554b84eec9SHong Zhang 
9564b84eec9SHong Zhang   PetscFunctionBegin;
9574b84eec9SHong Zhang   ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr);
9584b84eec9SHong Zhang   PetscFunctionReturn(0);
9594b84eec9SHong Zhang }
9604b84eec9SHong Zhang 
9614b84eec9SHong Zhang static PetscErrorCode DMCoarsenHook_TSMPRK(DM fine,DM coarse,void *ctx)
9624b84eec9SHong Zhang {
9634b84eec9SHong Zhang   PetscFunctionBegin;
9644b84eec9SHong Zhang   PetscFunctionReturn(0);
9654b84eec9SHong Zhang }
9664b84eec9SHong Zhang 
9674b84eec9SHong Zhang static PetscErrorCode DMRestrictHook_TSMPRK(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx)
9684b84eec9SHong Zhang {
9694b84eec9SHong Zhang   PetscFunctionBegin;
9704b84eec9SHong Zhang   PetscFunctionReturn(0);
9714b84eec9SHong Zhang }
9724b84eec9SHong Zhang 
9734b84eec9SHong Zhang static PetscErrorCode DMSubDomainHook_TSMPRK(DM dm,DM subdm,void *ctx)
9744b84eec9SHong Zhang {
9754b84eec9SHong Zhang   PetscFunctionBegin;
9764b84eec9SHong Zhang   PetscFunctionReturn(0);
9774b84eec9SHong Zhang }
9784b84eec9SHong Zhang 
9794b84eec9SHong Zhang static PetscErrorCode DMSubDomainRestrictHook_TSMPRK(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx)
9804b84eec9SHong Zhang {
9814b84eec9SHong Zhang   PetscFunctionBegin;
9824b84eec9SHong Zhang   PetscFunctionReturn(0);
9834b84eec9SHong Zhang }
9844b84eec9SHong Zhang 
9854b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauSetUp(TS ts)
9864b84eec9SHong Zhang {
9874b84eec9SHong Zhang   TS_MPRK        *mprk  = (TS_MPRK*)ts->data;
9884b84eec9SHong Zhang   MPRKTableau    tab = mprk->tableau;
98919c2959aSHong Zhang   Vec            YdotRHS_slow,YdotRHS_slowbuffer,YdotRHS_medium,YdotRHS_mediumbuffer,YdotRHS_fast;
9904b84eec9SHong Zhang   PetscErrorCode ierr;
9914b84eec9SHong Zhang 
9924b84eec9SHong Zhang   PetscFunctionBegin;
9934b84eec9SHong Zhang   ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->Y);CHKERRQ(ierr);
994*7c0df07dSHong Zhang   if (mprk->is_slow) {
99519c2959aSHong Zhang     ierr = PetscMalloc1(tab->s,&mprk->work_slow);CHKERRQ(ierr);
9964b84eec9SHong Zhang   }
997*7c0df07dSHong Zhang   ierr = PetscMalloc1(tab->s,&mprk->work_slowbuffer);CHKERRQ(ierr);
998*7c0df07dSHong Zhang   if (tab->np == 3) {
999*7c0df07dSHong Zhang     if (mprk->is_medium) {
1000*7c0df07dSHong Zhang       ierr = PetscMalloc1(tab->s,&mprk->work_medium);CHKERRQ(ierr);
1001*7c0df07dSHong Zhang     }
1002*7c0df07dSHong Zhang     ierr = PetscMalloc1(tab->s,&mprk->work_mediumbuffer);CHKERRQ(ierr);
1003*7c0df07dSHong Zhang   }
1004*7c0df07dSHong Zhang   ierr = PetscMalloc1(tab->s,&mprk->work_fast);CHKERRQ(ierr);
1005*7c0df07dSHong Zhang 
1006*7c0df07dSHong Zhang   if (mprk->mprkmtype == TSMPRKNONSPLIT) {
1007*7c0df07dSHong Zhang     ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->YdotRHS);CHKERRQ(ierr);
1008*7c0df07dSHong Zhang     if (mprk->is_slow) {
1009*7c0df07dSHong Zhang       ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr);
1010*7c0df07dSHong Zhang     }
1011*7c0df07dSHong Zhang     ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
1012*7c0df07dSHong Zhang     if (tab->np == 3) {
1013*7c0df07dSHong Zhang       if (mprk->is_medium) {
1014*7c0df07dSHong Zhang         ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr);
1015*7c0df07dSHong Zhang       }
1016*7c0df07dSHong Zhang       ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
1017*7c0df07dSHong Zhang     }
1018*7c0df07dSHong Zhang     ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr);
1019*7c0df07dSHong Zhang   } else {
102019c2959aSHong Zhang     if (mprk->is_slow) {
10214b84eec9SHong Zhang       ierr = VecGetSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr);
10224b84eec9SHong Zhang       ierr = VecDuplicateVecs(YdotRHS_slow,tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr);
10234b84eec9SHong Zhang       ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr);
102419c2959aSHong Zhang     }
102519c2959aSHong Zhang     ierr = VecGetSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr);
102619c2959aSHong Zhang     ierr = VecDuplicateVecs(YdotRHS_slowbuffer,tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr);
102719c2959aSHong Zhang     ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr);
102819c2959aSHong Zhang     if (tab->np == 3) {
102919c2959aSHong Zhang       if (mprk->is_medium) {
103019c2959aSHong Zhang         ierr = VecGetSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr);
103119c2959aSHong Zhang         ierr = VecDuplicateVecs(YdotRHS_medium,tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr);
103219c2959aSHong Zhang         ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr);
103319c2959aSHong Zhang       }
103419c2959aSHong Zhang       ierr = VecGetSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr);
103519c2959aSHong Zhang       ierr = VecDuplicateVecs(YdotRHS_mediumbuffer,tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr);
103619c2959aSHong Zhang       ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr);
103719c2959aSHong Zhang     }
103819c2959aSHong Zhang     ierr = VecGetSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr);
103919c2959aSHong Zhang     ierr = VecDuplicateVecs(YdotRHS_fast,tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr);
10404b84eec9SHong Zhang     ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr);
10414b84eec9SHong Zhang   }
10424b84eec9SHong Zhang   PetscFunctionReturn(0);
10434b84eec9SHong Zhang }
10444b84eec9SHong Zhang 
10454b84eec9SHong Zhang static PetscErrorCode TSSetUp_MPRK(TS ts)
10464b84eec9SHong Zhang {
10474b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
104819c2959aSHong Zhang   MPRKTableau    tab = mprk->tableau;
10494b84eec9SHong Zhang   DM             dm;
10504b84eec9SHong Zhang   PetscErrorCode ierr;
10514b84eec9SHong Zhang 
10524b84eec9SHong Zhang   PetscFunctionBegin;
10534b84eec9SHong Zhang   ierr = TSRHSSplitGetIS(ts,"slow",&mprk->is_slow);CHKERRQ(ierr);
10544b84eec9SHong Zhang   ierr = TSRHSSplitGetIS(ts,"fast",&mprk->is_fast);CHKERRQ(ierr);
105519c2959aSHong Zhang   if (!mprk->is_slow || !mprk->is_fast) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'fast' respectively in order to use the method '%s'",tab->name);
105619c2959aSHong Zhang 
105719c2959aSHong Zhang   if (tab->np == 3) {
105819c2959aSHong Zhang     ierr = TSRHSSplitGetIS(ts,"medium",&mprk->is_medium);CHKERRQ(ierr);
105919c2959aSHong Zhang     if (!mprk->is_medium) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'medium' and 'fast' respectively in order to use the method '%s'",tab->name);
106019c2959aSHong Zhang     ierr = TSRHSSplitGetIS(ts,"mediumbuffer",&mprk->is_mediumbuffer);CHKERRQ(ierr);
106119c2959aSHong Zhang     if (!mprk->is_mediumbuffer) { /* let medium buffer cover whole medium region */
106219c2959aSHong Zhang       mprk->is_mediumbuffer = mprk->is_medium;
106319c2959aSHong Zhang       mprk->is_medium = NULL;
106419c2959aSHong Zhang     }
106519c2959aSHong Zhang   }
106619c2959aSHong Zhang 
106719c2959aSHong Zhang   /* If users do not provide buffer region settings, the solver will do them automatically, but with a performance penalty */
106819c2959aSHong Zhang   ierr = TSRHSSplitGetIS(ts,"slowbuffer",&mprk->is_slowbuffer);CHKERRQ(ierr);
106919c2959aSHong Zhang   if (!mprk->is_slowbuffer) { /* let slow buffer cover whole slow region */
107019c2959aSHong Zhang     mprk->is_slowbuffer = mprk->is_slow;
107119c2959aSHong Zhang     mprk->is_slow = NULL;
107219c2959aSHong Zhang   }
107319c2959aSHong Zhang /*
107419c2959aSHong Zhang   if (!mprk->is_medium) {
107519c2959aSHong Zhang     mprk->is_medium = mprk->is_fast;
107619c2959aSHong Zhang     mprk->is_fast = NULL;
107719c2959aSHong Zhang   } else {
107819c2959aSHong Zhang     ierr = TSRHSSplitGetIS(ts,"mediumbuffer",&mprk->is_mediumbuffer);CHKERRQ(ierr);
107919c2959aSHong Zhang   }
108019c2959aSHong Zhang */
10814b84eec9SHong Zhang   ierr = TSCheckImplicitTerm(ts);CHKERRQ(ierr);
10824b84eec9SHong Zhang   ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr);
10834b84eec9SHong Zhang   ierr = TSGetDM(ts,&dm);CHKERRQ(ierr);
10844b84eec9SHong Zhang   ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr);
10854b84eec9SHong Zhang   ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr);
10864b84eec9SHong Zhang   ierr = PetscTryMethod(ts,"TSMPRKSetSplits_C",(TS),(ts));CHKERRQ(ierr);
10874b84eec9SHong Zhang   PetscFunctionReturn(0);
10884b84eec9SHong Zhang }
10894b84eec9SHong Zhang 
10904b84eec9SHong Zhang /* construct a database to chose nonsplit RHS mutirate mprk method or split RHS MPRK method */
10914b84eec9SHong Zhang const char *const TSMPRKMultirateTypes[] = {"NONSPLIT","SPLIT","TSMPRKMultirateType","TSMPRK",0};
10924b84eec9SHong Zhang 
10934b84eec9SHong Zhang static PetscErrorCode TSSetFromOptions_MPRK(PetscOptionItems *PetscOptionsObject,TS ts)
10944b84eec9SHong Zhang {
10954b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
10964b84eec9SHong Zhang   PetscErrorCode ierr;
10974b84eec9SHong Zhang 
10984b84eec9SHong Zhang   PetscFunctionBegin;
10994b84eec9SHong Zhang   ierr = PetscOptionsHead(PetscOptionsObject,"PRK ODE solver options");CHKERRQ(ierr);
11004b84eec9SHong Zhang   {
11014b84eec9SHong Zhang     MPRKTableauLink link;
11024b84eec9SHong Zhang     PetscInt        count,choice;
11034b84eec9SHong Zhang     PetscBool       flg;
11044b84eec9SHong Zhang     const char      **namelist;
11054b84eec9SHong Zhang     PetscInt        mprkmtype = 0;
11064b84eec9SHong Zhang     for (link=MPRKTableauList,count=0; link; link=link->next,count++) ;
11074b84eec9SHong Zhang     ierr = PetscMalloc1(count,(char***)&namelist);CHKERRQ(ierr);
11084b84eec9SHong Zhang     for (link=MPRKTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name;
11094b84eec9SHong Zhang     ierr = PetscOptionsEList("-ts_mprk_type","Family of MPRK method","TSMPRKSetType",(const char*const*)namelist,count,mprk->tableau->name,&choice,&flg);CHKERRQ(ierr);
11104b84eec9SHong Zhang     if (flg) {ierr = TSMPRKSetType(ts,namelist[choice]);CHKERRQ(ierr);}
11114b84eec9SHong Zhang     ierr = PetscFree(namelist);CHKERRQ(ierr);
11124b84eec9SHong Zhang     ierr = PetscOptionsEList("-ts_mprk_multirate_type","Use Combined RHS Multirate or Partioned RHS Multirat MPRK method","TSMPRKSetMultirateType",TSMPRKMultirateTypes,2,TSMPRKMultirateTypes[0],&mprkmtype,&flg);CHKERRQ(ierr);
11134b84eec9SHong Zhang      if (flg) {ierr = TSMPRKSetMultirateType(ts,mprkmtype);CHKERRQ(ierr);}
11144b84eec9SHong Zhang   }
11154b84eec9SHong Zhang   ierr = PetscOptionsTail();CHKERRQ(ierr);
11164b84eec9SHong Zhang   PetscFunctionReturn(0);
11174b84eec9SHong Zhang }
11184b84eec9SHong Zhang 
11194b84eec9SHong Zhang static PetscErrorCode TSView_MPRK(TS ts,PetscViewer viewer)
11204b84eec9SHong Zhang {
11214b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
11224b84eec9SHong Zhang   PetscBool      iascii;
11234b84eec9SHong Zhang   PetscErrorCode ierr;
11244b84eec9SHong Zhang 
11254b84eec9SHong Zhang   PetscFunctionBegin;
11264b84eec9SHong Zhang   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
11274b84eec9SHong Zhang   if (iascii) {
11284b84eec9SHong Zhang     MPRKTableau tab  = mprk->tableau;
11294b84eec9SHong Zhang     TSMPRKType  mprktype;
11304b84eec9SHong Zhang     char        fbuf[512];
11314b84eec9SHong Zhang     char        sbuf[512];
113219c2959aSHong Zhang     PetscInt    i;
11334b84eec9SHong Zhang     ierr = TSMPRKGetType(ts,&mprktype);CHKERRQ(ierr);
11344b84eec9SHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  MPRK type %s\n",mprktype);CHKERRQ(ierr);
11354b84eec9SHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  Order: %D\n",tab->order);CHKERRQ(ierr);
113619c2959aSHong Zhang 
11374b84eec9SHong Zhang     ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->cf);CHKERRQ(ierr);
11384b84eec9SHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  Abscissa cf = %s\n",fbuf);CHKERRQ(ierr);
113919c2959aSHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  Af = \n");CHKERRQ(ierr);
114019c2959aSHong Zhang     for (i=0; i<tab->s; i++) {
114119c2959aSHong Zhang       ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,&tab->Af[i*tab->s]);CHKERRQ(ierr);
114219c2959aSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"    %s\n",fbuf);CHKERRQ(ierr);
114319c2959aSHong Zhang     }
114419c2959aSHong Zhang     ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->bf);CHKERRQ(ierr);
114519c2959aSHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  bf = %s\n",fbuf);CHKERRQ(ierr);
114619c2959aSHong Zhang 
114719c2959aSHong Zhang     ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->csb);CHKERRQ(ierr);
114819c2959aSHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  Abscissa csb = %s\n",sbuf);CHKERRQ(ierr);
114919c2959aSHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  Asb = \n");CHKERRQ(ierr);
115019c2959aSHong Zhang     for (i=0; i<tab->s; i++) {
115119c2959aSHong Zhang       ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,&tab->Asb[i*tab->s]);CHKERRQ(ierr);
115219c2959aSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"    %s\n",sbuf);CHKERRQ(ierr);
115319c2959aSHong Zhang     }
115419c2959aSHong Zhang     ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->bsb);CHKERRQ(ierr);
115519c2959aSHong Zhang     ierr = PetscViewerASCIIPrintf(viewer,"  bsb = %s\n",sbuf);CHKERRQ(ierr);
115619c2959aSHong Zhang 
115719c2959aSHong Zhang     if (tab->np == 3) {
115819c2959aSHong Zhang       char mbuf[512];
115919c2959aSHong Zhang       ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->cmb);CHKERRQ(ierr);
116019c2959aSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  Abscissa cmb = %s\n",mbuf);CHKERRQ(ierr);
116119c2959aSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  Amb = \n");CHKERRQ(ierr);
116219c2959aSHong Zhang       for (i=0; i<tab->s; i++) {
116319c2959aSHong Zhang         ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,&tab->Amb[i*tab->s]);CHKERRQ(ierr);
116419c2959aSHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    %s\n",mbuf);CHKERRQ(ierr);
116519c2959aSHong Zhang       }
116619c2959aSHong Zhang       ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->bmb);CHKERRQ(ierr);
116719c2959aSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  bmb = %s\n",mbuf);CHKERRQ(ierr);
116819c2959aSHong Zhang     }
11694b84eec9SHong Zhang   }
11704b84eec9SHong Zhang   PetscFunctionReturn(0);
11714b84eec9SHong Zhang }
11724b84eec9SHong Zhang 
11734b84eec9SHong Zhang static PetscErrorCode TSLoad_MPRK(TS ts,PetscViewer viewer)
11744b84eec9SHong Zhang {
11754b84eec9SHong Zhang   PetscErrorCode ierr;
11764b84eec9SHong Zhang   TSAdapt        adapt;
11774b84eec9SHong Zhang 
11784b84eec9SHong Zhang   PetscFunctionBegin;
11794b84eec9SHong Zhang   ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr);
11804b84eec9SHong Zhang   ierr = TSAdaptLoad(adapt,viewer);CHKERRQ(ierr);
11814b84eec9SHong Zhang   PetscFunctionReturn(0);
11824b84eec9SHong Zhang }
11834b84eec9SHong Zhang 
11844b84eec9SHong Zhang /*@C
11854b84eec9SHong Zhang   TSMPRKSetType - Set the type of MPRK scheme
11864b84eec9SHong Zhang 
11874b84eec9SHong Zhang   Logically collective
11884b84eec9SHong Zhang 
11894b84eec9SHong Zhang   Input Parameter:
11904b84eec9SHong Zhang +  ts - timestepping context
11914b84eec9SHong Zhang -  mprktype - type of MPRK-scheme
11924b84eec9SHong Zhang 
11934b84eec9SHong Zhang   Options Database:
11944b84eec9SHong Zhang .   -ts_mprk_type - <pm2,p2,p3>
11954b84eec9SHong Zhang 
11964b84eec9SHong Zhang   Level: intermediate
11974b84eec9SHong Zhang 
11984b84eec9SHong Zhang .seealso: TSMPRKGetType(), TSMPRK, TSMPRKType
11994b84eec9SHong Zhang @*/
12004b84eec9SHong Zhang PetscErrorCode TSMPRKSetType(TS ts,TSMPRKType mprktype)
12014b84eec9SHong Zhang {
12024b84eec9SHong Zhang   PetscErrorCode ierr;
12034b84eec9SHong Zhang 
12044b84eec9SHong Zhang   PetscFunctionBegin;
12054b84eec9SHong Zhang   PetscValidHeaderSpecific(ts,TS_CLASSID,1);
12064b84eec9SHong Zhang   PetscValidCharPointer(mprktype,2);
12074b84eec9SHong Zhang   ierr = PetscTryMethod(ts,"TSMPRKSetType_C",(TS,TSMPRKType),(ts,mprktype));CHKERRQ(ierr);
12084b84eec9SHong Zhang   PetscFunctionReturn(0);
12094b84eec9SHong Zhang }
12104b84eec9SHong Zhang 
12114b84eec9SHong Zhang /*@C
12124b84eec9SHong Zhang   TSMPRKGetType - Get the type of MPRK scheme
12134b84eec9SHong Zhang 
12144b84eec9SHong Zhang   Logically collective
12154b84eec9SHong Zhang 
12164b84eec9SHong Zhang   Input Parameter:
12174b84eec9SHong Zhang .  ts - timestepping context
12184b84eec9SHong Zhang 
12194b84eec9SHong Zhang   Output Parameter:
12204b84eec9SHong Zhang .  mprktype - type of MPRK-scheme
12214b84eec9SHong Zhang 
12224b84eec9SHong Zhang   Level: intermediate
12234b84eec9SHong Zhang 
12244b84eec9SHong Zhang .seealso: TSMPRKGetType()
12254b84eec9SHong Zhang @*/
12264b84eec9SHong Zhang PetscErrorCode TSMPRKGetType(TS ts,TSMPRKType *mprktype)
12274b84eec9SHong Zhang {
12284b84eec9SHong Zhang   PetscErrorCode ierr;
12294b84eec9SHong Zhang 
12304b84eec9SHong Zhang   PetscFunctionBegin;
12314b84eec9SHong Zhang   PetscValidHeaderSpecific(ts,TS_CLASSID,1);
12324b84eec9SHong Zhang   ierr = PetscUseMethod(ts,"TSMPRKGetType_C",(TS,TSMPRKType*),(ts,mprktype));CHKERRQ(ierr);
12334b84eec9SHong Zhang   PetscFunctionReturn(0);
12344b84eec9SHong Zhang }
12354b84eec9SHong Zhang 
12364b84eec9SHong Zhang /*@C
12374b84eec9SHong Zhang   TSMPRKSetMultirateType - Set the type of MPRK multirate scheme
12384b84eec9SHong Zhang 
12394b84eec9SHong Zhang   Logically collective
12404b84eec9SHong Zhang 
12414b84eec9SHong Zhang   Input Parameter:
12424b84eec9SHong Zhang +  ts - timestepping context
12434b84eec9SHong Zhang -  mprkmtype - type of the multirate configuration
12444b84eec9SHong Zhang 
12454b84eec9SHong Zhang   Options Database:
12464b84eec9SHong Zhang .   -ts_mprk_multirate_type - <nonsplit,split>
12474b84eec9SHong Zhang 
12484b84eec9SHong Zhang   Level: intermediate
12494b84eec9SHong Zhang @*/
12504b84eec9SHong Zhang PetscErrorCode TSMPRKSetMultirateType(TS ts, TSMPRKMultirateType mprkmtype)
12514b84eec9SHong Zhang {
12524b84eec9SHong Zhang   TS_MPRK        *mprk = (TS_MPRK*)ts->data;
12534b84eec9SHong Zhang   PetscErrorCode ierr;
12544b84eec9SHong Zhang 
12554b84eec9SHong Zhang   PetscFunctionBegin;
12564b84eec9SHong Zhang   PetscValidHeaderSpecific(ts,TS_CLASSID,1);
12574b84eec9SHong Zhang   switch(mprkmtype){
12584b84eec9SHong Zhang     case TSMPRKNONSPLIT:
12594b84eec9SHong Zhang       ts->ops->step         = TSStep_MPRK;
12604b84eec9SHong Zhang       ts->ops->evaluatestep = TSEvaluateStep_MPRK;
12614b84eec9SHong Zhang       break;
12624b84eec9SHong Zhang     case TSMPRKSPLIT:
12634b84eec9SHong Zhang       ts->ops->step         = TSStep_MPRKSPLIT;
12644b84eec9SHong Zhang       ts->ops->evaluatestep = TSEvaluateStep_MPRKSPLIT;
12654b84eec9SHong Zhang       ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetSplits_C",TSMPRKSetSplits);CHKERRQ(ierr);
12664b84eec9SHong Zhang       break;
12674b84eec9SHong Zhang     default :
12684b84eec9SHong Zhang       SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Unknown type '%s'",mprkmtype);
12694b84eec9SHong Zhang   }
12704b84eec9SHong Zhang   mprk->mprkmtype = mprkmtype;
12714b84eec9SHong Zhang   PetscFunctionReturn(0);
12724b84eec9SHong Zhang }
12734b84eec9SHong Zhang 
12744b84eec9SHong Zhang static PetscErrorCode TSMPRKGetType_MPRK(TS ts,TSMPRKType *mprktype)
12754b84eec9SHong Zhang {
12764b84eec9SHong Zhang   TS_MPRK *mprk = (TS_MPRK*)ts->data;
12774b84eec9SHong Zhang 
12784b84eec9SHong Zhang   PetscFunctionBegin;
12794b84eec9SHong Zhang   *mprktype = mprk->tableau->name;
12804b84eec9SHong Zhang   PetscFunctionReturn(0);
12814b84eec9SHong Zhang }
12824b84eec9SHong Zhang 
12834b84eec9SHong Zhang static PetscErrorCode TSMPRKSetType_MPRK(TS ts,TSMPRKType mprktype)
12844b84eec9SHong Zhang {
12854b84eec9SHong Zhang   TS_MPRK         *mprk = (TS_MPRK*)ts->data;
12864b84eec9SHong Zhang   PetscBool       match;
12874b84eec9SHong Zhang   MPRKTableauLink link;
12884b84eec9SHong Zhang   PetscErrorCode  ierr;
12894b84eec9SHong Zhang 
12904b84eec9SHong Zhang   PetscFunctionBegin;
12914b84eec9SHong Zhang   if (mprk->tableau) {
12924b84eec9SHong Zhang     ierr = PetscStrcmp(mprk->tableau->name,mprktype,&match);CHKERRQ(ierr);
12934b84eec9SHong Zhang     if (match) PetscFunctionReturn(0);
12944b84eec9SHong Zhang   }
12954b84eec9SHong Zhang   for (link = MPRKTableauList; link; link=link->next) {
12964b84eec9SHong Zhang     ierr = PetscStrcmp(link->tab.name,mprktype,&match);CHKERRQ(ierr);
12974b84eec9SHong Zhang     if (match) {
12984b84eec9SHong Zhang       if (ts->setupcalled) {ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr);}
12994b84eec9SHong Zhang       mprk->tableau = &link->tab;
13004b84eec9SHong Zhang       if (ts->setupcalled) {ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr);}
13014b84eec9SHong Zhang       PetscFunctionReturn(0);
13024b84eec9SHong Zhang     }
13034b84eec9SHong Zhang   }
13044b84eec9SHong Zhang   SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",mprktype);
13054b84eec9SHong Zhang   PetscFunctionReturn(0);
13064b84eec9SHong Zhang }
13074b84eec9SHong Zhang 
13084b84eec9SHong Zhang static PetscErrorCode TSGetStages_MPRK(TS ts,PetscInt *ns,Vec **Y)
13094b84eec9SHong Zhang {
13104b84eec9SHong Zhang   TS_MPRK *mprk = (TS_MPRK*)ts->data;
13114b84eec9SHong Zhang 
13124b84eec9SHong Zhang   PetscFunctionBegin;
13134b84eec9SHong Zhang   *ns = mprk->tableau->s;
13144b84eec9SHong Zhang   if (Y) *Y = mprk->Y;
13154b84eec9SHong Zhang   PetscFunctionReturn(0);
13164b84eec9SHong Zhang }
13174b84eec9SHong Zhang 
13184b84eec9SHong Zhang static PetscErrorCode TSDestroy_MPRK(TS ts)
13194b84eec9SHong Zhang {
13204b84eec9SHong Zhang   PetscErrorCode ierr;
13214b84eec9SHong Zhang 
13224b84eec9SHong Zhang   PetscFunctionBegin;
13234b84eec9SHong Zhang   ierr = TSReset_MPRK(ts);CHKERRQ(ierr);
13244b84eec9SHong Zhang   if (ts->dm) {
13254b84eec9SHong Zhang     ierr = DMCoarsenHookRemove(ts->dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr);
13264b84eec9SHong Zhang     ierr = DMSubDomainHookRemove(ts->dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr);
13274b84eec9SHong Zhang   }
13284b84eec9SHong Zhang   ierr = PetscFree(ts->data);CHKERRQ(ierr);
13294b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",NULL);CHKERRQ(ierr);
13304b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",NULL);CHKERRQ(ierr);
13314b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetMultirateType_C",NULL);CHKERRQ(ierr);
13324b84eec9SHong Zhang   PetscFunctionReturn(0);
13334b84eec9SHong Zhang }
13344b84eec9SHong Zhang 
13354b84eec9SHong Zhang /*MC
13364b84eec9SHong Zhang       TSMPRK - ODE solver using Partitioned Runge-Kutta schemes
13374b84eec9SHong Zhang 
13384b84eec9SHong Zhang   The user should provide the right hand side of the equation
13394b84eec9SHong Zhang   using TSSetRHSFunction().
13404b84eec9SHong Zhang 
13414b84eec9SHong Zhang   Notes:
13424b84eec9SHong Zhang   The default is TSMPRKPM2, it can be changed with TSRKSetType() or -ts_mprk_type
13434b84eec9SHong Zhang 
13444b84eec9SHong Zhang   Level: beginner
13454b84eec9SHong Zhang 
13464b84eec9SHong Zhang .seealso:  TSCreate(), TS, TSSetType(), TSMPRKSetType(), TSMPRKGetType(), TSMPRKType, TSMPRKRegister(), TSMPRKSetMultirateType()
13474b84eec9SHong Zhang            TSMPRKM2, TSMPRKM3, TSMPRKRFSMR3, TSMPRKRFSMR2
13484b84eec9SHong Zhang 
13494b84eec9SHong Zhang M*/
13504b84eec9SHong Zhang PETSC_EXTERN PetscErrorCode TSCreate_MPRK(TS ts)
13514b84eec9SHong Zhang {
13524b84eec9SHong Zhang   TS_MPRK        *mprk;
13534b84eec9SHong Zhang   PetscErrorCode ierr;
13544b84eec9SHong Zhang 
13554b84eec9SHong Zhang   PetscFunctionBegin;
13564b84eec9SHong Zhang   ierr = TSMPRKInitializePackage();CHKERRQ(ierr);
13574b84eec9SHong Zhang 
13584b84eec9SHong Zhang   ts->ops->reset          = TSReset_MPRK;
13594b84eec9SHong Zhang   ts->ops->destroy        = TSDestroy_MPRK;
13604b84eec9SHong Zhang   ts->ops->view           = TSView_MPRK;
13614b84eec9SHong Zhang   ts->ops->load           = TSLoad_MPRK;
13624b84eec9SHong Zhang   ts->ops->setup          = TSSetUp_MPRK;
13634b84eec9SHong Zhang   ts->ops->step           = TSStep_MPRK;
13644b84eec9SHong Zhang   ts->ops->evaluatestep   = TSEvaluateStep_MPRK;
13654b84eec9SHong Zhang   ts->ops->setfromoptions = TSSetFromOptions_MPRK;
13664b84eec9SHong Zhang   ts->ops->getstages      = TSGetStages_MPRK;
13674b84eec9SHong Zhang 
13684b84eec9SHong Zhang   ierr = PetscNewLog(ts,&mprk);CHKERRQ(ierr);
13694b84eec9SHong Zhang   ts->data = (void*)mprk;
13704b84eec9SHong Zhang 
13714b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",TSMPRKGetType_MPRK);CHKERRQ(ierr);
13724b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",TSMPRKSetType_MPRK);CHKERRQ(ierr);
13734b84eec9SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetMultirateType_C",TSMPRKSetMultirateType);CHKERRQ(ierr);
13744b84eec9SHong Zhang 
13754b84eec9SHong Zhang   ierr = TSMPRKSetType(ts,TSMPRKDefault);CHKERRQ(ierr);
13764b84eec9SHong Zhang   PetscFunctionReturn(0);
13774b84eec9SHong Zhang }
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