14b84eec9SHong Zhang /* 24b84eec9SHong Zhang Code for time stepping with the Partitioned Runge-Kutta method 34b84eec9SHong Zhang 44b84eec9SHong Zhang Notes: 54b84eec9SHong Zhang 1) The general system is written as 64b84eec9SHong Zhang Udot = F(t,U) for nonsplit RHS multi-rate RK, 74b84eec9SHong Zhang user should give the indexes for both slow and fast components; 84b84eec9SHong Zhang 2) The general system is written as 94b84eec9SHong Zhang Usdot = Fs(t,Us,Uf) 104b84eec9SHong Zhang Ufdot = Ff(t,Us,Uf) for split RHS multi-rate RK, 114b84eec9SHong Zhang user should partioned RHS by themselves and also provide the indexes for both slow and fast components. 1219c2959aSHong Zhang 3) To correct The confusing terminology in the paper, we use 'slow method', 'slow buffer method' and 'fast method' to denote the methods applied to 'slow region', 'slow buffer region' and 'fast region' respectively. The 'slow method' in the original paper actually means the 'slow buffer method'. 1319c2959aSHong Zhang 4) Why does the buffer region have to be inside the slow region? The buffer region is treated with a slow method essentially. Applying the slow method to a region with a fast characteristic time scale is apparently not a good choice. 1419c2959aSHong Zhang 1519c2959aSHong Zhang Reference: 1619c2959aSHong Zhang Emil M. Constantinescu, Adrian Sandu, Multirate Timestepping Methods for Hyperbolic Conservation Laws, Journal of Scientific Computing 2007 1719c2959aSHong Zhang 184b84eec9SHong Zhang */ 194b84eec9SHong Zhang 204b84eec9SHong Zhang #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 214b84eec9SHong Zhang #include <petscdm.h> 224b84eec9SHong Zhang 2319c2959aSHong Zhang static TSMPRKType TSMPRKDefault = TSMPRK2A22; 244b84eec9SHong Zhang static PetscBool TSMPRKRegisterAllCalled; 254b84eec9SHong Zhang static PetscBool TSMPRKPackageInitialized; 264b84eec9SHong Zhang 274b84eec9SHong Zhang typedef struct _MPRKTableau *MPRKTableau; 284b84eec9SHong Zhang struct _MPRKTableau { 294b84eec9SHong Zhang char *name; 304b84eec9SHong Zhang PetscInt order; /* Classical approximation order of the method i */ 3179bc8a77SHong Zhang PetscInt sbase; /* Number of stages in the base method*/ 324b84eec9SHong Zhang PetscInt s; /* Number of stages */ 3319c2959aSHong Zhang PetscInt np; /* Number of partitions */ 344b84eec9SHong Zhang PetscReal *Af,*bf,*cf; /* Tableau for fast components */ 3519c2959aSHong Zhang PetscReal *Amb,*bmb,*cmb; /* Tableau for medium components */ 3619c2959aSHong Zhang PetscInt *rmb; /* Array of flags for repeated stages in medium method */ 3719c2959aSHong Zhang PetscReal *Asb,*bsb,*csb; /* Tableau for slow components */ 3819c2959aSHong Zhang PetscInt *rsb; /* Array of flags for repeated staged in slow method*/ 394b84eec9SHong Zhang }; 404b84eec9SHong Zhang typedef struct _MPRKTableauLink *MPRKTableauLink; 414b84eec9SHong Zhang struct _MPRKTableauLink { 424b84eec9SHong Zhang struct _MPRKTableau tab; 434b84eec9SHong Zhang MPRKTableauLink next; 444b84eec9SHong Zhang }; 454b84eec9SHong Zhang static MPRKTableauLink MPRKTableauList; 464b84eec9SHong Zhang 474b84eec9SHong Zhang typedef struct { 484b84eec9SHong Zhang MPRKTableau tableau; 494b84eec9SHong Zhang TSMPRKMultirateType mprkmtype; 504b84eec9SHong Zhang Vec *Y; /* States computed during the step */ 517c0df07dSHong Zhang Vec *YdotRHS; 524b84eec9SHong Zhang Vec *YdotRHS_slow; /* Function evaluations by slow tableau for slow components */ 5319c2959aSHong Zhang Vec *YdotRHS_slowbuffer; /* Function evaluations by slow tableau for slow components */ 5419c2959aSHong Zhang Vec *YdotRHS_medium; /* Function evaluations by slow tableau for slow components */ 5519c2959aSHong Zhang Vec *YdotRHS_mediumbuffer; /* Function evaluations by slow tableau for slow components */ 5619c2959aSHong Zhang Vec *YdotRHS_fast; /* Function evaluations by fast tableau for fast components */ 574b84eec9SHong Zhang PetscScalar *work_slow; /* Scalar work_slow by slow tableau */ 5819c2959aSHong Zhang PetscScalar *work_slowbuffer; /* Scalar work_slow by slow tableau */ 5919c2959aSHong Zhang PetscScalar *work_medium; /* Scalar work_slow by medium tableau */ 6019c2959aSHong Zhang PetscScalar *work_mediumbuffer; /* Scalar work_slow by medium tableau */ 6119c2959aSHong Zhang PetscScalar *work_fast; /* Scalar work_fast by fast tableau */ 624b84eec9SHong Zhang PetscReal stage_time; 634b84eec9SHong Zhang TSStepStatus status; 644b84eec9SHong Zhang PetscReal ptime; 654b84eec9SHong Zhang PetscReal time_step; 6619c2959aSHong Zhang IS is_slow,is_slowbuffer,is_medium,is_mediumbuffer,is_fast; 6719c2959aSHong Zhang TS subts_slow,subts_slowbuffer,subts_medium,subts_mediumbuffer,subts_fast; 684b84eec9SHong Zhang } TS_MPRK; 694b84eec9SHong Zhang 7019c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau2(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[]) 7119c2959aSHong Zhang { 7219c2959aSHong Zhang PetscInt i,j,k,l; 7319c2959aSHong Zhang 7419c2959aSHong Zhang PetscFunctionBegin; 7519c2959aSHong Zhang for (k=0; k<ratio; k++) { 7619c2959aSHong Zhang /* diagonal blocks */ 7719c2959aSHong Zhang for (i=0; i<s; i++) 7819c2959aSHong Zhang for (j=0; j<s; j++) { 7919c2959aSHong Zhang A1[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j]; 8019c2959aSHong Zhang A2[(k*s+i)*ratio*s+k*s+j] = Abase[i*s+j]/ratio; 8119c2959aSHong Zhang } 8219c2959aSHong Zhang /* off diagonal blocks */ 8319c2959aSHong Zhang for (l=0; l<k; l++) 8419c2959aSHong Zhang for (i=0; i<s; i++) 8519c2959aSHong Zhang for (j=0; j<s; j++) 8619c2959aSHong Zhang A2[(k*s+i)*ratio*s+l*s+j] = bbase[j]/ratio; 8719c2959aSHong Zhang for (j=0; j<s; j++) { 8819c2959aSHong Zhang b1[k*s+j] = bbase[j]/ratio; 8919c2959aSHong Zhang b2[k*s+j] = bbase[j]/ratio; 9019c2959aSHong Zhang } 9119c2959aSHong Zhang } 9219c2959aSHong Zhang PetscFunctionReturn(0); 9319c2959aSHong Zhang } 9419c2959aSHong Zhang 9519c2959aSHong Zhang static PetscErrorCode TSMPRKGenerateTableau3(PetscInt ratio,PetscInt s,const PetscReal Abase[],const PetscReal bbase[],PetscReal A1[],PetscReal b1[],PetscReal A2[],PetscReal b2[],PetscReal A3[],PetscReal b3[]) 9619c2959aSHong Zhang { 9719c2959aSHong Zhang PetscInt i,j,k,l,m,n; 9819c2959aSHong Zhang 9919c2959aSHong Zhang PetscFunctionBegin; 10019c2959aSHong Zhang for (k=0; k<ratio; k++) { /* diagonal blocks of size ratio*s by ratio*s */ 10119c2959aSHong Zhang for (l=0; l<ratio; l++) /* diagonal sub-blocks of size s by s */ 10219c2959aSHong Zhang for (i=0; i<s; i++) 10319c2959aSHong Zhang for (j=0; j<s; j++) { 10419c2959aSHong Zhang A1[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]; 10519c2959aSHong Zhang A2[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio; 10619c2959aSHong Zhang A3[((k*ratio+l)*s+i)*ratio*ratio*s+(k*ratio+l)*s+j] = Abase[i*s+j]/ratio/ratio; 10719c2959aSHong Zhang } 10819c2959aSHong Zhang for (l=0; l<k; l++) /* off-diagonal blocks of size ratio*s by ratio*s */ 10919c2959aSHong Zhang for (m=0; m<ratio; m++) 11019c2959aSHong Zhang for (n=0; n<ratio; n++) 11119c2959aSHong Zhang for (i=0; i<s; i++) 11219c2959aSHong Zhang for (j=0; j<s; j++) { 11319c2959aSHong Zhang A2[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio; 11419c2959aSHong Zhang A3[((k*ratio+m)*s+i)*ratio*ratio*s+(l*ratio+n)*s+j] = bbase[j]/ratio/ratio; 11519c2959aSHong Zhang } 11619c2959aSHong Zhang for (m=0; m<ratio; m++) 11719c2959aSHong Zhang for (n=0; n<m; n++) /* off-diagonal sub-blocks of size s by s in the diagonal blocks */ 11819c2959aSHong Zhang for (i=0; i<s; i++) 11919c2959aSHong Zhang for (j=0; j<s; j++) 12019c2959aSHong Zhang A3[((k*ratio+m)*s+i)*ratio*ratio*s+(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12119c2959aSHong Zhang for (n=0; n<ratio; n++) 12219c2959aSHong Zhang for (j=0; j<s; j++) { 12319c2959aSHong Zhang b1[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12419c2959aSHong Zhang b2[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12519c2959aSHong Zhang b3[(k*ratio+n)*s+j] = bbase[j]/ratio/ratio; 12619c2959aSHong Zhang } 12719c2959aSHong Zhang } 12819c2959aSHong Zhang PetscFunctionReturn(0); 12919c2959aSHong Zhang } 13019c2959aSHong Zhang 1314b84eec9SHong Zhang /*MC 13219c2959aSHong Zhang TSMPRK2A22 - Second Order Partitioned Runge Kutta scheme based on RK2A. 1334b84eec9SHong Zhang 13419c2959aSHong Zhang This method has four stages for slow and fast parts. The refinement factor of the stepsize is 2. 13519c2959aSHong Zhang r = 2, np = 2 1364b84eec9SHong Zhang Options database: 13719c2959aSHong Zhang . -ts_mprk_type 2a22 1384b84eec9SHong Zhang 1394b84eec9SHong Zhang Level: advanced 1404b84eec9SHong Zhang 1414b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 1424b84eec9SHong Zhang M*/ 1434b84eec9SHong Zhang /*MC 14419c2959aSHong Zhang TSMPRK2A23 - Second Order Partitioned Runge Kutta scheme based on RK2A. 14519c2959aSHong Zhang 14619c2959aSHong Zhang This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 2. 14719c2959aSHong Zhang r = 2, np = 3 14819c2959aSHong Zhang Options database: 14919c2959aSHong Zhang . -ts_mprk_type 2a23 15019c2959aSHong Zhang 15119c2959aSHong Zhang Level: advanced 15219c2959aSHong Zhang 15319c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 15419c2959aSHong Zhang M*/ 15519c2959aSHong Zhang /*MC 15619c2959aSHong Zhang TSMPRK2A32 - Second Order Partitioned Runge Kutta scheme based on RK2A. 15719c2959aSHong Zhang 15819c2959aSHong Zhang This method has four stages for slow and fast parts. The refinement factor of the stepsize is 3. 15919c2959aSHong Zhang r = 3, np = 2 16019c2959aSHong Zhang Options database: 16119c2959aSHong Zhang . -ts_mprk_type 2a32 16219c2959aSHong Zhang 16319c2959aSHong Zhang Level: advanced 16419c2959aSHong Zhang 16519c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 16619c2959aSHong Zhang M*/ 16719c2959aSHong Zhang /*MC 16819c2959aSHong Zhang TSMPRK2A33 - Second Order Partitioned Runge Kutta scheme based on RK2A. 16919c2959aSHong Zhang 17019c2959aSHong Zhang This method has eight stages for slow and medium and fast parts. The refinement factor of the stepsize is 3. 17119c2959aSHong Zhang r = 3, np = 3 17219c2959aSHong Zhang Options database: 17319c2959aSHong Zhang . -ts_mprk_type 2a33 17419c2959aSHong Zhang 17519c2959aSHong Zhang Level: advanced 17619c2959aSHong Zhang 17719c2959aSHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 17819c2959aSHong Zhang M*/ 17919c2959aSHong Zhang /*MC 18019c2959aSHong Zhang TSMPRK3P2M - Third Order Partitioned Runge Kutta scheme. 1814b84eec9SHong Zhang 1824b84eec9SHong Zhang This method has eight stages for both slow and fast parts. 1834b84eec9SHong Zhang 1844b84eec9SHong Zhang Options database: 1854b84eec9SHong Zhang . -ts_mprk_type pm3 (put here temporarily) 1864b84eec9SHong Zhang 1874b84eec9SHong Zhang Level: advanced 1884b84eec9SHong Zhang 1894b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 1904b84eec9SHong Zhang M*/ 1914b84eec9SHong Zhang /*MC 1924b84eec9SHong Zhang TSMPRKP2 - Second Order Partitioned Runge Kutta scheme. 1934b84eec9SHong Zhang 1944b84eec9SHong Zhang This method has five stages for both slow and fast parts. 1954b84eec9SHong Zhang 1964b84eec9SHong Zhang Options database: 1974b84eec9SHong Zhang . -ts_mprk_type p2 1984b84eec9SHong Zhang 1994b84eec9SHong Zhang Level: advanced 2004b84eec9SHong Zhang 2014b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 2024b84eec9SHong Zhang M*/ 2034b84eec9SHong Zhang /*MC 2044b84eec9SHong Zhang TSMPRKP3 - Third Order Partitioned Runge Kutta scheme. 2054b84eec9SHong Zhang 2064b84eec9SHong Zhang This method has ten stages for both slow and fast parts. 2074b84eec9SHong Zhang 2084b84eec9SHong Zhang Options database: 2094b84eec9SHong Zhang . -ts_mprk_type p3 2104b84eec9SHong Zhang 2114b84eec9SHong Zhang Level: advanced 2124b84eec9SHong Zhang 2134b84eec9SHong Zhang .seealso: TSMPRK, TSMPRKType, TSMPRKSetType() 2144b84eec9SHong Zhang M*/ 2154b84eec9SHong Zhang 2164b84eec9SHong Zhang /*@C 2174b84eec9SHong Zhang TSMPRKRegisterAll - Registers all of the Partirioned Runge-Kutta explicit methods in TSMPRK 2184b84eec9SHong Zhang 2194b84eec9SHong Zhang Not Collective, but should be called by all processes which will need the schemes to be registered 2204b84eec9SHong Zhang 2214b84eec9SHong Zhang Level: advanced 2224b84eec9SHong Zhang 2234b84eec9SHong Zhang .keywords: TS, TSMPRK, register, all 2244b84eec9SHong Zhang 2254b84eec9SHong Zhang .seealso: TSMPRKRegisterDestroy() 2264b84eec9SHong Zhang @*/ 2274b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterAll(void) 2284b84eec9SHong Zhang { 2294b84eec9SHong Zhang PetscErrorCode ierr; 2304b84eec9SHong Zhang 2314b84eec9SHong Zhang PetscFunctionBegin; 2324b84eec9SHong Zhang if (TSMPRKRegisterAllCalled) PetscFunctionReturn(0); 2334b84eec9SHong Zhang TSMPRKRegisterAllCalled = PETSC_TRUE; 2344b84eec9SHong Zhang 2354b84eec9SHong Zhang #define RC PetscRealConstant 2364b84eec9SHong Zhang { 2374b84eec9SHong Zhang const PetscReal 23819c2959aSHong Zhang Abase[2][2] = {{0,0}, 23919c2959aSHong Zhang {RC(1.0),0}}, 24019c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 24119c2959aSHong Zhang PetscReal 24219c2959aSHong Zhang Asb[4][4] = {{0}},Af[4][4] = {{0}},bsb[4] = {0},bf[4] = {0}; 24319c2959aSHong Zhang PetscInt 24419c2959aSHong Zhang rsb[4] = {0,0,1,2}; 24519c2959aSHong Zhang ierr = TSMPRKGenerateTableau2(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr); 24679bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A22,2,2,2,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 2474b84eec9SHong Zhang } 24819c2959aSHong Zhang { 24919c2959aSHong Zhang const PetscReal 25019c2959aSHong Zhang Abase[2][2] = {{0,0}, 25119c2959aSHong Zhang {RC(1.0),0}}, 25219c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 25319c2959aSHong Zhang PetscReal 25419c2959aSHong Zhang Asb[8][8] = {{0}},Amb[8][8] = {{0}},Af[8][8] = {{0}},bsb[8] ={0},bmb[8] = {0},bf[8] = {0}; 25519c2959aSHong Zhang PetscInt 25619c2959aSHong Zhang rsb[8] = {0,0,1,2,1,2,1,2},rmb[8] = {0,0,1,2,0,0,5,6}; 25719c2959aSHong Zhang ierr = TSMPRKGenerateTableau3(2,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr); 25879bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A23,2,2,2,2,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr); 25919c2959aSHong Zhang } 26019c2959aSHong Zhang { 26119c2959aSHong Zhang const PetscReal 26219c2959aSHong Zhang Abase[2][2] = {{0,0}, 26319c2959aSHong Zhang {RC(1.0),0}}, 26419c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 26519c2959aSHong Zhang PetscReal 26619c2959aSHong Zhang Asb[6][6] = {{0}},Af[6][6] = {{0}},bsb[6] = {0},bf[6] = {0}; 26719c2959aSHong Zhang PetscInt 26819c2959aSHong Zhang rsb[6] = {0,0,1,2,1,2}; 26919c2959aSHong Zhang ierr = TSMPRKGenerateTableau2(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Af[0][0],bf);CHKERRQ(ierr); 27079bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A32,2,2,3,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 27119c2959aSHong Zhang } 27219c2959aSHong Zhang { 27319c2959aSHong Zhang const PetscReal 27419c2959aSHong Zhang Abase[2][2] = {{0,0}, 27519c2959aSHong Zhang {RC(1.0),0}}, 27619c2959aSHong Zhang bbase[2] = {RC(0.5),RC(0.5)}; 27719c2959aSHong Zhang PetscReal 27819c2959aSHong Zhang Asb[18][18] = {{0}},Amb[18][18] = {{0}},Af[18][18] = {{0}},bsb[18] ={0},bmb[18] = {0},bf[18] = {0}; 27919c2959aSHong Zhang PetscInt 28019c2959aSHong Zhang rsb[18] = {0,0,1,2,1,2,1,2,1,2,1,2,1,2,1,2,1,2},rmb[18] = {0,0,1,2,1,2,0,0,7,8,7,8,0,0,13,14,13,14}; 28119c2959aSHong Zhang ierr = TSMPRKGenerateTableau3(3,2,&Abase[0][0],bbase,&Asb[0][0],bsb,&Amb[0][0],bmb,&Af[0][0],bf);CHKERRQ(ierr); 28279bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRK2A33,2,2,3,3,&Asb[0][0],bsb,NULL,rsb,&Amb[0][0],bmb,NULL,rmb,&Af[0][0],bf,NULL);CHKERRQ(ierr); 28319c2959aSHong Zhang } 28419c2959aSHong Zhang /* 28519c2959aSHong Zhang PetscReal 28619c2959aSHong Zhang Asb[8][8] = {{Abase[0][0],Abase[0][1],0,0,0,0,0,0}, 28719c2959aSHong Zhang {Abase[1][0],Abase[1][1],0,0,0,0,0,0}, 28819c2959aSHong Zhang {0,0,Abase[0][0],Abase[0][1],0,0,0,0}, 28919c2959aSHong Zhang {0,0,Abase[1][0],Abase[1][1],0,0,0,0}, 29019c2959aSHong Zhang {0,0,0,0,Abase[0][0],Abase[0][1],0,0}, 29119c2959aSHong Zhang {0,0,0,0,Abase[1][0],Abase[1][1],0,0}, 29219c2959aSHong Zhang {0,0,0,0,0,0,Abase[0][0],Abase[0][1]}, 29319c2959aSHong Zhang {0,0,0,0,0,0,Abase[1][0],Abase[1][1]}}, 29419c2959aSHong Zhang Amb[8][8] = {{Abase[0][0]/m,Abase[0][1]/m,0,0,0,0,0,0}, 29519c2959aSHong Zhang {Abase[1][0]/m,Abase[1][1]/m,0,0,0,0,0,0}, 29619c2959aSHong Zhang {0,0,Abase[0][0]/m,Abase[0][1]/m,0,0,0,0}, 29719c2959aSHong Zhang {0,0,Abase[1][0]/m,Abase[1][1]/m,0,0,0,0}, 29819c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[0][0]/m,Abase[0][1]/m,0,0}, 29919c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,Abase[1][0]/m,Abase[1][1]/m,0,0}, 30019c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[0][0]/m,Abase[0][1]/m}, 30119c2959aSHong Zhang {bbase[0]/m,bbase[1]/m,bbase[0]/m,bbase[1]/m,0,0,Abase[1][0]/m,Abase[1][1]/m}}, 30219c2959aSHong Zhang Af[8][8] = {{Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0,0,0}, 30319c2959aSHong Zhang {Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0,0,0}, 30419c2959aSHong Zhang {0,0,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0,0,0}, 30519c2959aSHong Zhang {0,0,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0,0,0}, 30619c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m/m,Abase[0][1]/m/m,0,0}, 30719c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m/m,Abase[1][1]/m/m,0,0}, 30819c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[0][0]/m,Abase[0][1]/m}, 30919c2959aSHong Zhang {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,Abase[1][0]/m,Abase[1][1]/m}}, 31019c2959aSHong Zhang bsb[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m}, 31119c2959aSHong Zhang bmb[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m,bbase[1]/m/m}, 31219c2959aSHong Zhang bf[8] = {bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m/m,bbase[0]/m/m,bbase[1]/m,bbase[0]/m/m,bbase[1]/m/m}, 31319c2959aSHong Zhang */ 3144b84eec9SHong Zhang /*{ 3154b84eec9SHong Zhang const PetscReal 3164b84eec9SHong Zhang As[8][8] = {{0,0,0,0,0,0,0,0}, 3174b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0}, 3184b84eec9SHong Zhang {RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0,0,0,0,0}, 3194b84eec9SHong Zhang {RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0,0}, 3204b84eec9SHong Zhang {0,0,0,0,0,0,0,0}, 3214b84eec9SHong Zhang {0,0,0,0,RC(1.0)/RC(2.0),0,0,0}, 3224b84eec9SHong Zhang {0,0,0,0,RC(-1.0)/RC(6.0),RC(2.0)/RC(3.0),0,0}, 3234b84eec9SHong Zhang {0,0,0,0,RC(1.0)/RC(3.0),RC(-1.0)/RC(3.0),RC(1.0),0}}, 3244b84eec9SHong Zhang A[8][8] = {{0,0,0,0,0,0,0,0}, 3254b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0}, 3264b84eec9SHong Zhang {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0}, 3274b84eec9SHong Zhang {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0}, 3284b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0}, 3294b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(4.0),0,0,0}, 3304b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0}, 3314b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0}}, 3324b84eec9SHong Zhang bs[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)}, 3334b84eec9SHong Zhang b[8] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0)}; 3344b84eec9SHong Zhang ierr = TSMPRKRegister(TSMPRKPM3,3,8,&As[0][0],bs,NULL,&A[0][0],b,NULL);CHKERRQ(ierr); 3354b84eec9SHong Zhang }*/ 3364b84eec9SHong Zhang 3374b84eec9SHong Zhang { 3384b84eec9SHong Zhang const PetscReal 33919c2959aSHong Zhang Asb[5][5] = {{0,0,0,0,0}, 3404b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3414b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3424b84eec9SHong Zhang {RC(1.0),0,0,0,0}, 3434b84eec9SHong Zhang {RC(1.0),0,0,0,0}}, 34419c2959aSHong Zhang Af[5][5] = {{0,0,0,0,0}, 3454b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0}, 3464b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0,0,0}, 3474b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(2.0),0,0}, 3484b84eec9SHong Zhang {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0}}, 34919c2959aSHong Zhang bsb[5] = {RC(1.0)/RC(2.0),0,0,0,RC(1.0)/RC(2.0)}, 35019c2959aSHong Zhang bf[5] = {RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),RC(1.0)/RC(4.0),0}; 35119c2959aSHong Zhang const PetscInt 35219c2959aSHong Zhang rsb[5] = {0,0,2,0,4}; 35379bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRKP2,2,5,1,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 3544b84eec9SHong Zhang } 3554b84eec9SHong Zhang 3564b84eec9SHong Zhang { 3574b84eec9SHong Zhang const PetscReal 35819c2959aSHong Zhang Asb[10][10] = {{0,0,0,0,0,0,0,0,0,0}, 3594b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3604b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3614b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0}, 3624b84eec9SHong Zhang {RC(1.0)/RC(2.0),0,0,0,0,0,0,0,0,0}, 3634b84eec9SHong Zhang {RC(-1.0)/RC(6.0),0,0,0,RC(2.0)/RC(3.0),0,0,0,0,0}, 3644b84eec9SHong Zhang {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0}, 3654b84eec9SHong Zhang {RC(1.0)/RC(12.0),0,0,0,RC(1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0}, 3664b84eec9SHong Zhang {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0}, 3674b84eec9SHong Zhang {RC(1.0)/RC(3.0),0,0,0,RC(-1.0)/RC(3.0),RC(1.0),0,0,0,0}}, 36819c2959aSHong Zhang Af[10][10] = {{0,0,0,0,0,0,0,0,0,0}, 3694b84eec9SHong Zhang {RC(1.0)/RC(4.0),0,0,0,0,0,0,0,0,0}, 3704b84eec9SHong Zhang {RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0,0,0,0,0,0}, 3714b84eec9SHong Zhang {RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0,0,0,0,0,0}, 3724b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0}, 3734b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,0,0,0,0,0}, 3744b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(4.0),0,0,0,0}, 3754b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(-1.0)/RC(12.0),RC(1.0)/RC(3.0),0,0,0}, 3764b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(6.0),RC(-1.0)/RC(6.0),RC(1.0)/RC(2.0),0,0}, 3774b84eec9SHong Zhang {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0}}, 37819c2959aSHong Zhang bsb[10] = {RC(1.0)/RC(6.0),0,0,0,RC(1.0)/RC(3.0),RC(1.0)/RC(3.0),0,0,0,RC(1.0)/RC(6.0)}, 37919c2959aSHong Zhang bf[10] = {RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0,RC(1.0)/RC(12.0),RC(1.0)/RC(6.0),RC(1.0)/RC(6.0),RC(1.0)/RC(12.0),0}; 38019c2959aSHong Zhang const PetscInt 38119c2959aSHong Zhang rsb[10] = {0,0,2,0,4,0,0,7,0,9}; 38279bc8a77SHong Zhang ierr = TSMPRKRegister(TSMPRKP3,3,5,2,1,&Asb[0][0],bsb,NULL,rsb,NULL,NULL,NULL,NULL,&Af[0][0],bf,NULL);CHKERRQ(ierr); 3834b84eec9SHong Zhang } 3844b84eec9SHong Zhang #undef RC 3854b84eec9SHong Zhang PetscFunctionReturn(0); 3864b84eec9SHong Zhang } 3874b84eec9SHong Zhang 3884b84eec9SHong Zhang /*@C 3894b84eec9SHong Zhang TSMPRKRegisterDestroy - Frees the list of schemes that were registered by TSMPRKRegister(). 3904b84eec9SHong Zhang 3914b84eec9SHong Zhang Not Collective 3924b84eec9SHong Zhang 3934b84eec9SHong Zhang Level: advanced 3944b84eec9SHong Zhang 3954b84eec9SHong Zhang .keywords: TSMPRK, register, destroy 3964b84eec9SHong Zhang .seealso: TSMPRKRegister(), TSMPRKRegisterAll() 3974b84eec9SHong Zhang @*/ 3984b84eec9SHong Zhang PetscErrorCode TSMPRKRegisterDestroy(void) 3994b84eec9SHong Zhang { 4004b84eec9SHong Zhang PetscErrorCode ierr; 4014b84eec9SHong Zhang MPRKTableauLink link; 4024b84eec9SHong Zhang 4034b84eec9SHong Zhang PetscFunctionBegin; 4044b84eec9SHong Zhang while ((link = MPRKTableauList)) { 4054b84eec9SHong Zhang MPRKTableau t = &link->tab; 4064b84eec9SHong Zhang MPRKTableauList = link->next; 40719c2959aSHong Zhang ierr = PetscFree3(t->Asb,t->bsb,t->csb);CHKERRQ(ierr); 40819c2959aSHong Zhang ierr = PetscFree3(t->Amb,t->bmb,t->cmb);CHKERRQ(ierr); 4094b84eec9SHong Zhang ierr = PetscFree3(t->Af,t->bf,t->cf);CHKERRQ(ierr); 41019c2959aSHong Zhang ierr = PetscFree2(t->rsb,t->rmb);CHKERRQ(ierr); 4114b84eec9SHong Zhang ierr = PetscFree (t->name);CHKERRQ(ierr); 4124b84eec9SHong Zhang ierr = PetscFree (link);CHKERRQ(ierr); 4134b84eec9SHong Zhang } 4144b84eec9SHong Zhang TSMPRKRegisterAllCalled = PETSC_FALSE; 4154b84eec9SHong Zhang PetscFunctionReturn(0); 4164b84eec9SHong Zhang } 4174b84eec9SHong Zhang 4184b84eec9SHong Zhang /*@C 4194b84eec9SHong Zhang TSMPRKInitializePackage - This function initializes everything in the TSMPRK package. It is called 4204b84eec9SHong Zhang from PetscDLLibraryRegister() when using dynamic libraries, and on the first call to TSCreate_MPRK() 4214b84eec9SHong Zhang when using static libraries. 4224b84eec9SHong Zhang 4234b84eec9SHong Zhang Level: developer 4244b84eec9SHong Zhang 4254b84eec9SHong Zhang .keywords: TS, TSMPRK, initialize, package 4264b84eec9SHong Zhang .seealso: PetscInitialize() 4274b84eec9SHong Zhang @*/ 4284b84eec9SHong Zhang PetscErrorCode TSMPRKInitializePackage(void) 4294b84eec9SHong Zhang { 4304b84eec9SHong Zhang PetscErrorCode ierr; 4314b84eec9SHong Zhang 4324b84eec9SHong Zhang PetscFunctionBegin; 4334b84eec9SHong Zhang if (TSMPRKPackageInitialized) PetscFunctionReturn(0); 4344b84eec9SHong Zhang TSMPRKPackageInitialized = PETSC_TRUE; 4354b84eec9SHong Zhang ierr = TSMPRKRegisterAll();CHKERRQ(ierr); 4364b84eec9SHong Zhang ierr = PetscRegisterFinalize(TSMPRKFinalizePackage);CHKERRQ(ierr); 4374b84eec9SHong Zhang PetscFunctionReturn(0); 4384b84eec9SHong Zhang } 4394b84eec9SHong Zhang 4404b84eec9SHong Zhang /*@C 4414b84eec9SHong Zhang TSRKFinalizePackage - This function destroys everything in the TSMPRK package. It is 4424b84eec9SHong Zhang called from PetscFinalize(). 4434b84eec9SHong Zhang 4444b84eec9SHong Zhang Level: developer 4454b84eec9SHong Zhang 4464b84eec9SHong Zhang .keywords: Petsc, destroy, package 4474b84eec9SHong Zhang .seealso: PetscFinalize() 4484b84eec9SHong Zhang @*/ 4494b84eec9SHong Zhang PetscErrorCode TSMPRKFinalizePackage(void) 4504b84eec9SHong Zhang { 4514b84eec9SHong Zhang PetscErrorCode ierr; 4524b84eec9SHong Zhang 4534b84eec9SHong Zhang PetscFunctionBegin; 4544b84eec9SHong Zhang TSMPRKPackageInitialized = PETSC_FALSE; 4554b84eec9SHong Zhang ierr = TSMPRKRegisterDestroy();CHKERRQ(ierr); 4564b84eec9SHong Zhang PetscFunctionReturn(0); 4574b84eec9SHong Zhang } 4584b84eec9SHong Zhang 4594b84eec9SHong Zhang /*@C 4604b84eec9SHong Zhang TSMPRKRegister - register a MPRK scheme by providing the entries in the Butcher tableau 4614b84eec9SHong Zhang 4624b84eec9SHong Zhang Not Collective, but the same schemes should be registered on all processes on which they will be used 4634b84eec9SHong Zhang 4644b84eec9SHong Zhang Input Parameters: 4654b84eec9SHong Zhang + name - identifier for method 4664b84eec9SHong Zhang . order - approximation order of method 46779bc8a77SHong Zhang . s - number of stages in the base methods 46879bc8a77SHong Zhang . ratio1 - stepsize ratio at 1st level (e.g. slow/medium) 46979bc8a77SHong Zhang . ratio2 - stepsize ratio at 2nd level (e.g. medium/fast) 4704b84eec9SHong Zhang . Af - stage coefficients for fast components(dimension s*s, row-major) 4714b84eec9SHong Zhang . bf - step completion table for fast components(dimension s) 4724b84eec9SHong Zhang . cf - abscissa for fast components(dimension s) 4734b84eec9SHong Zhang . As - stage coefficients for slow components(dimension s*s, row-major) 4744b84eec9SHong Zhang . bs - step completion table for slow components(dimension s) 4754b84eec9SHong Zhang - cs - abscissa for slow components(dimension s) 4764b84eec9SHong Zhang 4774b84eec9SHong Zhang Notes: 4784b84eec9SHong Zhang Several MPRK methods are provided, this function is only needed to create new methods. 4794b84eec9SHong Zhang 4804b84eec9SHong Zhang Level: advanced 4814b84eec9SHong Zhang 4824b84eec9SHong Zhang .keywords: TS, register 4834b84eec9SHong Zhang 4844b84eec9SHong Zhang .seealso: TSMPRK 4854b84eec9SHong Zhang @*/ 48679bc8a77SHong Zhang PetscErrorCode TSMPRKRegister(TSMPRKType name,PetscInt order, 48779bc8a77SHong Zhang PetscInt sbase,PetscInt ratio1,PetscInt ratio2, 48819c2959aSHong Zhang const PetscReal Asb[],const PetscReal bsb[],const PetscReal csb[],const PetscInt rsb[], 48919c2959aSHong Zhang const PetscReal Amb[],const PetscReal bmb[],const PetscReal cmb[],const PetscInt rmb[], 4904b84eec9SHong Zhang const PetscReal Af[],const PetscReal bf[],const PetscReal cf[]) 4914b84eec9SHong Zhang { 4924b84eec9SHong Zhang MPRKTableauLink link; 4934b84eec9SHong Zhang MPRKTableau t; 49479bc8a77SHong Zhang PetscInt s,i,j; 4954b84eec9SHong Zhang PetscErrorCode ierr; 4964b84eec9SHong Zhang 4974b84eec9SHong Zhang PetscFunctionBegin; 4984b84eec9SHong Zhang PetscValidCharPointer(name,1); 49919c2959aSHong Zhang PetscValidRealPointer(Asb,4); 50079bc8a77SHong Zhang if (bsb) PetscValidRealPointer(bsb,7); 50179bc8a77SHong Zhang if (csb) PetscValidRealPointer(csb,8); 50279bc8a77SHong Zhang if (rsb) PetscValidRealPointer(rsb,9); 50379bc8a77SHong Zhang if (Amb) PetscValidRealPointer(Amb,10); 50479bc8a77SHong Zhang if (bmb) PetscValidRealPointer(bmb,11); 50579bc8a77SHong Zhang if (cmb) PetscValidRealPointer(cmb,12); 50679bc8a77SHong Zhang if (rmb) PetscValidRealPointer(rmb,13); 50779bc8a77SHong Zhang PetscValidRealPointer(Af,14); 50879bc8a77SHong Zhang if (bf) PetscValidRealPointer(bf,15); 50979bc8a77SHong Zhang if (cf) PetscValidRealPointer(cf,16); 5104b84eec9SHong Zhang 5114b84eec9SHong Zhang ierr = PetscNew(&link);CHKERRQ(ierr); 5124b84eec9SHong Zhang t = &link->tab; 5134b84eec9SHong Zhang 5144b84eec9SHong Zhang ierr = PetscStrallocpy(name,&t->name);CHKERRQ(ierr); 51579bc8a77SHong Zhang s = sbase*ratio1*ratio2; /* this is the dimension of the matrices below */ 5164b84eec9SHong Zhang t->order = order; 51779bc8a77SHong Zhang t->sbase = sbase; 5184b84eec9SHong Zhang t->s = s; 51919c2959aSHong Zhang t->np = 2; 52079bc8a77SHong Zhang 5214b84eec9SHong Zhang ierr = PetscMalloc3(s*s,&t->Af,s,&t->bf,s,&t->cf);CHKERRQ(ierr); 5224b84eec9SHong Zhang ierr = PetscMemcpy(t->Af,Af,s*s*sizeof(Af[0]));CHKERRQ(ierr); 5234b84eec9SHong Zhang if (bf) { 5244b84eec9SHong Zhang ierr = PetscMemcpy(t->bf,bf,s*sizeof(bf[0]));CHKERRQ(ierr); 52519c2959aSHong Zhang } else 5264b84eec9SHong Zhang for (i=0; i<s; i++) t->bf[i] = Af[(s-1)*s+i]; 5274b84eec9SHong Zhang if (cf) { 5284b84eec9SHong Zhang ierr = PetscMemcpy(t->cf,cf,s*sizeof(cf[0]));CHKERRQ(ierr); 52919c2959aSHong Zhang } else { 5304b84eec9SHong Zhang for (i=0; i<s; i++) 5314b84eec9SHong Zhang for (j=0,t->cf[i]=0; j<s; j++) 5324b84eec9SHong Zhang t->cf[i] += Af[i*s+j]; 5334b84eec9SHong Zhang } 53419c2959aSHong Zhang 53519c2959aSHong Zhang if (Amb) { 53619c2959aSHong Zhang t->np = 3; 53719c2959aSHong Zhang ierr = PetscMalloc3(s*s,&t->Amb,s,&t->bmb,s,&t->cmb);CHKERRQ(ierr); 53819c2959aSHong Zhang ierr = PetscCalloc1(s,&t->rmb);CHKERRQ(ierr); 53919c2959aSHong Zhang ierr = PetscMemcpy(t->Amb,Amb,s*s*sizeof(Amb[0]));CHKERRQ(ierr); 54019c2959aSHong Zhang if (bmb) { 54119c2959aSHong Zhang ierr = PetscMemcpy(t->bmb,bmb,s*sizeof(bmb[0]));CHKERRQ(ierr); 54219c2959aSHong Zhang } else { 54319c2959aSHong Zhang for (i=0; i<s; i++) t->bmb[i] = Amb[(s-1)*s+i]; 5444b84eec9SHong Zhang } 54519c2959aSHong Zhang if (cmb) { 54619c2959aSHong Zhang ierr = PetscMemcpy(t->cmb,cmb,s*sizeof(cmb[0]));CHKERRQ(ierr); 54719c2959aSHong Zhang } else { 5484b84eec9SHong Zhang for (i=0; i<s; i++) 54919c2959aSHong Zhang for (j=0,t->cmb[i]=0; j<s; j++) 55019c2959aSHong Zhang t->cmb[i] += Amb[i*s+j]; 55119c2959aSHong Zhang } 55219c2959aSHong Zhang if (rmb) { 55319c2959aSHong Zhang ierr = PetscMemcpy(t->rmb,rmb,s*sizeof(rmb[0]));CHKERRQ(ierr); 55419c2959aSHong Zhang } 55519c2959aSHong Zhang } 55619c2959aSHong Zhang 55719c2959aSHong Zhang ierr = PetscMalloc3(s*s,&t->Asb,s,&t->bsb,s,&t->csb);CHKERRQ(ierr); 55819c2959aSHong Zhang ierr = PetscMemcpy(t->Asb,Asb,s*s*sizeof(Asb[0]));CHKERRQ(ierr); 55919c2959aSHong Zhang ierr = PetscCalloc1(s,&t->rsb);CHKERRQ(ierr); 56019c2959aSHong Zhang if (bsb) { 56119c2959aSHong Zhang ierr = PetscMemcpy(t->bsb,bsb,s*sizeof(bsb[0]));CHKERRQ(ierr); 56219c2959aSHong Zhang } else 56319c2959aSHong Zhang for (i=0; i<s; i++) t->bsb[i] = Asb[(s-1)*s+i]; 56419c2959aSHong Zhang if (csb) { 56519c2959aSHong Zhang ierr = PetscMemcpy(t->csb,csb,s*sizeof(csb[0]));CHKERRQ(ierr); 56619c2959aSHong Zhang } else { 56719c2959aSHong Zhang for (i=0; i<s; i++) 56819c2959aSHong Zhang for (j=0,t->csb[i]=0; j<s; j++) 56919c2959aSHong Zhang t->csb[i] += Asb[i*s+j]; 57019c2959aSHong Zhang } 57119c2959aSHong Zhang if (rsb) { 57219c2959aSHong Zhang ierr = PetscMemcpy(t->rsb,rsb,s*sizeof(rsb[0]));CHKERRQ(ierr); 5734b84eec9SHong Zhang } 5744b84eec9SHong Zhang link->next = MPRKTableauList; 5754b84eec9SHong Zhang MPRKTableauList = link; 5764b84eec9SHong Zhang PetscFunctionReturn(0); 5774b84eec9SHong Zhang } 5784b84eec9SHong Zhang 5794b84eec9SHong Zhang static PetscErrorCode TSMPRKSetSplits(TS ts) 5804b84eec9SHong Zhang { 5814b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 58219c2959aSHong Zhang MPRKTableau tab = mprk->tableau; 5834b84eec9SHong Zhang DM dm,subdm,newdm; 5844b84eec9SHong Zhang PetscErrorCode ierr; 5854b84eec9SHong Zhang 5864b84eec9SHong Zhang PetscFunctionBegin; 5874b84eec9SHong Zhang ierr = TSRHSSplitGetSubTS(ts,"slow",&mprk->subts_slow);CHKERRQ(ierr); 5884b84eec9SHong Zhang ierr = TSRHSSplitGetSubTS(ts,"fast",&mprk->subts_fast);CHKERRQ(ierr); 5894b84eec9SHong Zhang if (!mprk->subts_slow || !mprk->subts_fast) SETERRQ(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up the RHSFunctions for 'slow' and 'fast' components using TSRHSSplitSetRHSFunction() or calling TSSetRHSFunction() for each sub-TS"); 5904b84eec9SHong Zhang 59119c2959aSHong Zhang /* Only copy the DM */ 5924b84eec9SHong Zhang ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 59319c2959aSHong Zhang 59419c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"slowbuffer",&mprk->subts_slowbuffer);CHKERRQ(ierr); 59519c2959aSHong Zhang if (!mprk->subts_slowbuffer) { 59619c2959aSHong Zhang mprk->subts_slowbuffer = mprk->subts_slow; 59719c2959aSHong Zhang mprk->subts_slow = NULL; 59819c2959aSHong Zhang } 59919c2959aSHong Zhang if (mprk->subts_slow) { 6004b84eec9SHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 6014b84eec9SHong Zhang ierr = TSGetDM(mprk->subts_slow,&subdm);CHKERRQ(ierr); 6024b84eec9SHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 6034b84eec9SHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 6044b84eec9SHong Zhang ierr = TSSetDM(mprk->subts_slow,newdm);CHKERRQ(ierr); 6054b84eec9SHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 60619c2959aSHong Zhang } 60719c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 60819c2959aSHong Zhang ierr = TSGetDM(mprk->subts_slowbuffer,&subdm);CHKERRQ(ierr); 60919c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 61019c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 61119c2959aSHong Zhang ierr = TSSetDM(mprk->subts_slowbuffer,newdm);CHKERRQ(ierr); 61219c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 61319c2959aSHong Zhang 61419c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 61519c2959aSHong Zhang ierr = TSGetDM(mprk->subts_fast,&subdm);CHKERRQ(ierr); 61619c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 61719c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 61819c2959aSHong Zhang ierr = TSSetDM(mprk->subts_fast,newdm);CHKERRQ(ierr); 61919c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 62019c2959aSHong Zhang 62119c2959aSHong Zhang if (tab->np == 3) { 62219c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"medium",&mprk->subts_medium);CHKERRQ(ierr); 62319c2959aSHong Zhang ierr = TSRHSSplitGetSubTS(ts,"mediumbuffer",&mprk->subts_mediumbuffer);CHKERRQ(ierr); 62419c2959aSHong Zhang if (mprk->subts_medium && !mprk->subts_mediumbuffer) { 62519c2959aSHong Zhang mprk->subts_mediumbuffer = mprk->subts_medium; 62619c2959aSHong Zhang mprk->subts_medium = NULL; 62719c2959aSHong Zhang } 62819c2959aSHong Zhang if (mprk->subts_medium) { 62919c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 63019c2959aSHong Zhang ierr = TSGetDM(mprk->subts_medium,&subdm);CHKERRQ(ierr); 63119c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 63219c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 63319c2959aSHong Zhang ierr = TSSetDM(mprk->subts_medium,newdm);CHKERRQ(ierr); 63419c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 63519c2959aSHong Zhang } 63619c2959aSHong Zhang ierr = DMClone(dm,&newdm);CHKERRQ(ierr); 63719c2959aSHong Zhang ierr = TSGetDM(mprk->subts_mediumbuffer,&subdm);CHKERRQ(ierr); 63819c2959aSHong Zhang ierr = DMCopyDMTS(subdm,newdm);CHKERRQ(ierr); 63919c2959aSHong Zhang ierr = DMCopyDMSNES(subdm,newdm);CHKERRQ(ierr); 64019c2959aSHong Zhang ierr = TSSetDM(mprk->subts_mediumbuffer,newdm);CHKERRQ(ierr); 64119c2959aSHong Zhang ierr = DMDestroy(&newdm);CHKERRQ(ierr); 64219c2959aSHong Zhang } 6434b84eec9SHong Zhang PetscFunctionReturn(0); 6444b84eec9SHong Zhang } 6454b84eec9SHong Zhang 6464b84eec9SHong Zhang /* 6474b84eec9SHong Zhang This if for nonsplit RHS MPRK 6484b84eec9SHong Zhang The step completion formula is 6494b84eec9SHong Zhang 6504b84eec9SHong Zhang x1 = x0 + h b^T YdotRHS 6514b84eec9SHong Zhang 6524b84eec9SHong Zhang */ 6534b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRK(TS ts,PetscInt order,Vec X,PetscBool *done) 6544b84eec9SHong Zhang { 6554b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 6564b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 6577c0df07dSHong Zhang PetscScalar *wf = mprk->work_fast; 6584b84eec9SHong Zhang PetscReal h = ts->time_step; 6594b84eec9SHong Zhang PetscInt s = tab->s,j; 6604b84eec9SHong Zhang PetscErrorCode ierr; 6614b84eec9SHong Zhang 6624b84eec9SHong Zhang PetscFunctionBegin; 6634b84eec9SHong Zhang for (j=0; j<s; j++) wf[j] = h*tab->bf[j]; 6647c0df07dSHong Zhang ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 6657c0df07dSHong Zhang ierr = VecMAXPY(X,s,wf,mprk->YdotRHS);CHKERRQ(ierr); 6664b84eec9SHong Zhang PetscFunctionReturn(0); 6674b84eec9SHong Zhang } 6684b84eec9SHong Zhang 6694b84eec9SHong Zhang static PetscErrorCode TSStep_MPRK(TS ts) 6704b84eec9SHong Zhang { 6714b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 6727c0df07dSHong Zhang Vec *Y = mprk->Y,*YdotRHS = mprk->YdotRHS,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer; 6737c0df07dSHong Zhang Vec Yslow,Yslowbuffer,Yfast; 6744b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 6754b84eec9SHong Zhang const PetscInt s = tab->s; 67619c2959aSHong Zhang const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb; 677*ebd5ed4eSHong Zhang PetscScalar *wf = mprk->work_fast,*wsb = mprk->work_slowbuffer; 678*ebd5ed4eSHong Zhang PetscInt i,j; 6794b84eec9SHong Zhang PetscReal next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step; 6804b84eec9SHong Zhang PetscErrorCode ierr; 6814b84eec9SHong Zhang 6824b84eec9SHong Zhang PetscFunctionBegin; 6834b84eec9SHong Zhang for (i=0; i<s; i++) { 6844b84eec9SHong Zhang mprk->stage_time = t + h*cf[i]; 6854b84eec9SHong Zhang ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr); 6867c0df07dSHong Zhang ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 6874b84eec9SHong Zhang 6887c0df07dSHong Zhang /* slow buffer region */ 68919c2959aSHong Zhang for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j]; 6909849be05SHong Zhang for (j=0; j<i; j++) { 6917c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr); 6927c0df07dSHong Zhang } 6937c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 6947c0df07dSHong Zhang ierr = VecMAXPY(Yslowbuffer,i,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 6957c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 6969849be05SHong Zhang for (j=0; j<i; j++) { 6977c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slowbuffer,&YdotRHS_slowbuffer[j]);CHKERRQ(ierr); 6987c0df07dSHong Zhang } 6997c0df07dSHong Zhang /* slow region */ 7007c0df07dSHong Zhang if (mprk->is_slow) { 7019849be05SHong Zhang for (j=0; j<i; j++) { 7027c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr); 7037c0df07dSHong Zhang } 7047c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 705*ebd5ed4eSHong Zhang ierr = VecMAXPY(Yslow,i,wsb,mprk->YdotRHS_slow);CHKERRQ(ierr); 7067c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 707*ebd5ed4eSHong Zhang for (j=0; j<i; j++) { 7087c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_slow,&YdotRHS_slow[j]);CHKERRQ(ierr); 7097c0df07dSHong Zhang } 7107c0df07dSHong Zhang } 7114b84eec9SHong Zhang 7127c0df07dSHong Zhang /* fast region */ 7134b84eec9SHong Zhang for (j=0; j<i; j++) wf[j] = h*Af[i*s+j]; 7149849be05SHong Zhang for (j=0; j<i; j++) { 7157c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr); 7167c0df07dSHong Zhang } 7177c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 7187c0df07dSHong Zhang ierr = VecMAXPY(Yfast,i,wf,mprk->YdotRHS_fast);CHKERRQ(ierr); 7197c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 7209849be05SHong Zhang for (j=0; j<i; j++) { 7217c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_fast,&YdotRHS_fast[j]);CHKERRQ(ierr); 7227c0df07dSHong Zhang } 7237c0df07dSHong Zhang if (tab->np == 3) { 7247c0df07dSHong Zhang Vec *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer; 7257c0df07dSHong Zhang Vec Ymedium,Ymediumbuffer; 726*ebd5ed4eSHong Zhang PetscScalar *wmb = mprk->work_mediumbuffer; 727*ebd5ed4eSHong Zhang 728*ebd5ed4eSHong Zhang for (j=0; j<i; j++) wmb[j] = h*tab->Amb[i*s+j]; 7297c0df07dSHong Zhang /* medium region */ 7307c0df07dSHong Zhang if (mprk->is_medium) { 7317c0df07dSHong Zhang for (j=0; j<i; j++) { 7327c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr); 7337c0df07dSHong Zhang } 7347c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 735*ebd5ed4eSHong Zhang ierr = VecMAXPY(Ymedium,i,wmb,mprk->YdotRHS_medium);CHKERRQ(ierr); 7367c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 737*ebd5ed4eSHong Zhang for (j=0; j<i; j++) { 7387c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_medium,&YdotRHS_medium[j]);CHKERRQ(ierr); 7397c0df07dSHong Zhang } 7407c0df07dSHong Zhang } 7417c0df07dSHong Zhang /* medium buffer region */ 7429849be05SHong Zhang for (j=0; j<i; j++) { 7437c0df07dSHong Zhang ierr = VecGetSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr); 7447c0df07dSHong Zhang } 7457c0df07dSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 7467c0df07dSHong Zhang ierr = VecMAXPY(Ymediumbuffer,i,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 7477c0df07dSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 7489849be05SHong Zhang for (j=0; j<i; j++) { 7497c0df07dSHong Zhang ierr = VecRestoreSubVector(YdotRHS[j],mprk->is_mediumbuffer,&YdotRHS_mediumbuffer[j]);CHKERRQ(ierr); 7507c0df07dSHong Zhang } 7517c0df07dSHong Zhang } 7524b84eec9SHong Zhang ierr = TSPostStage(ts,mprk->stage_time,i,Y); CHKERRQ(ierr); 7534b84eec9SHong Zhang /* compute the stage RHS by fast and slow tableau respectively */ 7547c0df07dSHong Zhang ierr = TSComputeRHSFunction(ts,t+h*csb[i],Y[i],YdotRHS[i]);CHKERRQ(ierr); 7554b84eec9SHong Zhang } 7564b84eec9SHong Zhang ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 7574b84eec9SHong Zhang ts->ptime += ts->time_step; 7584b84eec9SHong Zhang ts->time_step = next_time_step; 7594b84eec9SHong Zhang PetscFunctionReturn(0); 7604b84eec9SHong Zhang } 7614b84eec9SHong Zhang 7624b84eec9SHong Zhang /* 7634b84eec9SHong Zhang This if for partitioned RHS MPRK 7644b84eec9SHong Zhang The step completion formula is 7654b84eec9SHong Zhang 7664b84eec9SHong Zhang x1 = x0 + h b^T YdotRHS 7674b84eec9SHong Zhang 7684b84eec9SHong Zhang */ 7694b84eec9SHong Zhang static PetscErrorCode TSEvaluateStep_MPRKSPLIT(TS ts,PetscInt order,Vec X,PetscBool *done) 7704b84eec9SHong Zhang { 7714b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 7724b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 77319c2959aSHong Zhang Vec Xslow,Xfast,Xslowbuffer; /* subvectors for slow and fast componets in X respectively */ 77419c2959aSHong Zhang PetscScalar *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer; 7754b84eec9SHong Zhang PetscReal h = ts->time_step; 77679bc8a77SHong Zhang PetscInt s = tab->s,j,computedstages; 7774b84eec9SHong Zhang PetscErrorCode ierr; 7784b84eec9SHong Zhang 7794b84eec9SHong Zhang PetscFunctionBegin; 7804b84eec9SHong Zhang ierr = VecCopy(ts->vec_sol,X);CHKERRQ(ierr); 78119c2959aSHong Zhang 78219c2959aSHong Zhang /* slow region */ 78319c2959aSHong Zhang if (mprk->is_slow) { 78479bc8a77SHong Zhang computedstages = 0; 78519c2959aSHong Zhang for (j=0; j<s; j++) { 7869849be05SHong Zhang if (tab->rsb[j]) ws[tab->rsb[j]-1] += h*tab->bsb[j]; 78779bc8a77SHong Zhang else ws[computedstages++] = h*tab->bsb[j]; 78819c2959aSHong Zhang } 7894b84eec9SHong Zhang ierr = VecGetSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr); 79079bc8a77SHong Zhang ierr = VecMAXPY(Xslow,computedstages,ws,mprk->YdotRHS_slow);CHKERRQ(ierr); 79119c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slow,&Xslow);CHKERRQ(ierr); 79219c2959aSHong Zhang } 79319c2959aSHong Zhang 7949d6e09e9SHong Zhang if (tab->np == 3 && mprk->is_medium) { 7959d6e09e9SHong Zhang computedstages = 0; 7969d6e09e9SHong Zhang for (j=0; j<s; j++) { 7979d6e09e9SHong Zhang if (tab->rmb[j]) wsb[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += h*tab->bsb[j]; 7989d6e09e9SHong Zhang else wsb[computedstages++] = h*tab->bsb[j]; 7999d6e09e9SHong Zhang } 8009d6e09e9SHong Zhang ierr = VecGetSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8019d6e09e9SHong Zhang ierr = VecMAXPY(Xslowbuffer,computedstages,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 8029d6e09e9SHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8039d6e09e9SHong Zhang } else { 80419c2959aSHong Zhang /* slow buffer region */ 80519c2959aSHong Zhang for (j=0; j<s; j++) wsb[j] = h*tab->bsb[j]; 80619c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 80719c2959aSHong Zhang ierr = VecMAXPY(Xslowbuffer,s,wsb,mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 80819c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_slowbuffer,&Xslowbuffer);CHKERRQ(ierr); 8099d6e09e9SHong Zhang } 81019c2959aSHong Zhang if (tab->np == 3) { 81119c2959aSHong Zhang Vec Xmedium,Xmediumbuffer; 81219c2959aSHong Zhang PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer; 8139d6e09e9SHong Zhang /* medium region and slow buffer region */ 81419c2959aSHong Zhang if (mprk->is_medium) { 81579bc8a77SHong Zhang computedstages = 0; 81619c2959aSHong Zhang for (j=0; j<s; j++) { 81779bc8a77SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += h*tab->bmb[j]; 81879bc8a77SHong Zhang else wm[computedstages++] = h*tab->bmb[j]; 81919c2959aSHong Zhang } 82019c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr); 82179bc8a77SHong Zhang ierr = VecMAXPY(Xmedium,computedstages,wm,mprk->YdotRHS_medium);CHKERRQ(ierr); 82219c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_medium,&Xmedium);CHKERRQ(ierr); 82319c2959aSHong Zhang } 82419c2959aSHong Zhang /* medium buffer region */ 82519c2959aSHong Zhang for (j=0; j<s; j++) wmb[j] = h*tab->bmb[j]; 82619c2959aSHong Zhang ierr = VecGetSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr); 82719c2959aSHong Zhang ierr = VecMAXPY(Xmediumbuffer,s,wmb,mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 82819c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_mediumbuffer,&Xmediumbuffer);CHKERRQ(ierr); 82919c2959aSHong Zhang } 83019c2959aSHong Zhang /* fast region */ 83119c2959aSHong Zhang for (j=0; j<s; j++) wf[j] = h*tab->bf[j]; 8324b84eec9SHong Zhang ierr = VecGetSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr); 8334b84eec9SHong Zhang ierr = VecMAXPY(Xfast,s,wf,mprk->YdotRHS_fast);CHKERRQ(ierr); 83419c2959aSHong Zhang ierr = VecRestoreSubVector(X,mprk->is_fast,&Xfast);CHKERRQ(ierr); 8354b84eec9SHong Zhang PetscFunctionReturn(0); 8364b84eec9SHong Zhang } 8374b84eec9SHong Zhang 8384b84eec9SHong Zhang static PetscErrorCode TSStep_MPRKSPLIT(TS ts) 8394b84eec9SHong Zhang { 8404b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 8414b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 84219c2959aSHong Zhang Vec *Y = mprk->Y,*YdotRHS_fast = mprk->YdotRHS_fast,*YdotRHS_slow = mprk->YdotRHS_slow,*YdotRHS_slowbuffer = mprk->YdotRHS_slowbuffer; 84319c2959aSHong Zhang Vec Yslow,Yslowbuffer,Yfast; /* subvectors for slow and fast components in Y[i] respectively */ 84419c2959aSHong Zhang PetscInt s = tab->s; 84519c2959aSHong Zhang const PetscReal *Af = tab->Af,*cf = tab->cf,*Asb = tab->Asb,*csb = tab->csb; 84619c2959aSHong Zhang PetscScalar *wf = mprk->work_fast,*ws = mprk->work_slow,*wsb = mprk->work_slowbuffer; 84779bc8a77SHong Zhang PetscInt i,j,computedstages; 8484b84eec9SHong Zhang PetscReal next_time_step = ts->time_step,t = ts->ptime,h = ts->time_step; 8494b84eec9SHong Zhang PetscErrorCode ierr; 8504b84eec9SHong Zhang 8514b84eec9SHong Zhang PetscFunctionBegin; 8524b84eec9SHong Zhang for (i=0; i<s; i++) { 8534b84eec9SHong Zhang mprk->stage_time = t + h*cf[i]; 8544b84eec9SHong Zhang ierr = TSPreStage(ts,mprk->stage_time);CHKERRQ(ierr); 8554b84eec9SHong Zhang /* calculate the stage value for fast and slow components respectively */ 8564b84eec9SHong Zhang ierr = VecCopy(ts->vec_sol,Y[i]);CHKERRQ(ierr); 85719c2959aSHong Zhang for (j=0; j<i; j++) wsb[j] = h*Asb[i*s+j]; 85819c2959aSHong Zhang 85919c2959aSHong Zhang /* slow buffer region */ 8609d6e09e9SHong Zhang if (tab->np == 3 && mprk->is_medium) { 8619d6e09e9SHong Zhang if (tab->rmb[i]) { 8629d6e09e9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8639d6e09e9SHong Zhang ierr = VecISCopy(Y[tab->rmb[i]-1],mprk->is_slowbuffer,SCATTER_REVERSE,Yslowbuffer);CHKERRQ(ierr); 8649d6e09e9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8659d6e09e9SHong Zhang } else { 8669d6e09e9SHong Zhang PetscScalar *wm = mprk->work_medium; 8679d6e09e9SHong Zhang computedstages = 0; 8689d6e09e9SHong Zhang for (j=0; j<i; j++) { 8699d6e09e9SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += wsb[j]; 8709d6e09e9SHong Zhang else wm[computedstages++] = wsb[j]; 8719d6e09e9SHong Zhang } 8729d6e09e9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8739d6e09e9SHong Zhang ierr = VecMAXPY(Yslowbuffer,computedstages,wm,YdotRHS_slowbuffer);CHKERRQ(ierr); 8749d6e09e9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8759d6e09e9SHong Zhang } 8769d6e09e9SHong Zhang } else { 87719c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 87819c2959aSHong Zhang ierr = VecMAXPY(Yslowbuffer,i,wsb,YdotRHS_slowbuffer);CHKERRQ(ierr); 87919c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slowbuffer,&Yslowbuffer);CHKERRQ(ierr); 8809d6e09e9SHong Zhang } 8819849be05SHong Zhang 88219c2959aSHong Zhang /* slow region */ 8839849be05SHong Zhang if (mprk->is_slow) { 8849849be05SHong Zhang if (tab->rsb[i]) { /* repeat previous stage */ 8859849be05SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 8869849be05SHong Zhang ierr = VecISCopy(Y[tab->rsb[i]-1],mprk->is_slow,SCATTER_REVERSE,Yslow);CHKERRQ(ierr); 8879849be05SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 8889849be05SHong Zhang } else { 88979bc8a77SHong Zhang computedstages = 0; 89019c2959aSHong Zhang for (j=0; j<i; j++) { 89179bc8a77SHong Zhang if (tab->rsb[j]) ws[tab->rsb[j]-1] += wsb[j]; 89279bc8a77SHong Zhang else ws[computedstages++] = wsb[j]; 89319c2959aSHong Zhang } 8944b84eec9SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 89579bc8a77SHong Zhang ierr = VecMAXPY(Yslow,computedstages,ws,YdotRHS_slow);CHKERRQ(ierr); 8964b84eec9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_slow,&Yslow);CHKERRQ(ierr); 89719c2959aSHong Zhang /* only depends on the slow buffer region */ 89879bc8a77SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slow,t+h*csb[i],Y[i],YdotRHS_slow[computedstages]);CHKERRQ(ierr); 89919c2959aSHong Zhang } 9009849be05SHong Zhang } 90119c2959aSHong Zhang 90219c2959aSHong Zhang /* fast region */ 90319c2959aSHong Zhang for (j=0; j<i; j++) wf[j] = h*Af[i*s+j]; 90419c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 90519c2959aSHong Zhang ierr = VecMAXPY(Yfast,i,wf,YdotRHS_fast);CHKERRQ(ierr); 9064b84eec9SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_fast,&Yfast);CHKERRQ(ierr); 90719c2959aSHong Zhang 90819c2959aSHong Zhang if (tab->np == 3) { 90919c2959aSHong Zhang Vec *YdotRHS_medium = mprk->YdotRHS_medium,*YdotRHS_mediumbuffer = mprk->YdotRHS_mediumbuffer; 91019c2959aSHong Zhang Vec Ymedium,Ymediumbuffer; 91119c2959aSHong Zhang const PetscReal *Amb = tab->Amb,*cmb = tab->cmb; 91219c2959aSHong Zhang PetscScalar *wm = mprk->work_medium,*wmb = mprk->work_mediumbuffer; 91319c2959aSHong Zhang 91419c2959aSHong Zhang for (j=0; j<i; j++) wmb[j] = h*Amb[i*s+j]; 91519c2959aSHong Zhang /* medium buffer region */ 91619c2959aSHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 91719c2959aSHong Zhang ierr = VecMAXPY(Ymediumbuffer,i,wmb,YdotRHS_mediumbuffer);CHKERRQ(ierr); 91819c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_mediumbuffer,&Ymediumbuffer);CHKERRQ(ierr); 91919c2959aSHong Zhang /* medium region */ 92079bc8a77SHong Zhang if (mprk->is_medium) { 92179bc8a77SHong Zhang if (tab->rmb[i]) { /* repeat previous stage */ 92279bc8a77SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 92379bc8a77SHong Zhang ierr = VecISCopy(Y[tab->rmb[i]-1],mprk->is_medium,SCATTER_REVERSE,Ymedium);CHKERRQ(ierr); 92419c2959aSHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 92579bc8a77SHong Zhang } else { 92679bc8a77SHong Zhang computedstages = 0; 92779bc8a77SHong Zhang for (j=0; j<i; j++) { 92879bc8a77SHong Zhang if (tab->rmb[j]) wm[computedstages-tab->sbase+(tab->rmb[j]-1)%tab->sbase] += wmb[j]; 92979bc8a77SHong Zhang else wm[computedstages++] = wmb[j]; 93079bc8a77SHong Zhang 93179bc8a77SHong Zhang } 93279bc8a77SHong Zhang ierr = VecGetSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 93379bc8a77SHong Zhang ierr = VecMAXPY(Ymedium,computedstages,wm,YdotRHS_medium);CHKERRQ(ierr); 93479bc8a77SHong Zhang ierr = VecRestoreSubVector(Y[i],mprk->is_medium,&Ymedium);CHKERRQ(ierr); 93579bc8a77SHong Zhang /* only depends on the medium buffer region */ 93679bc8a77SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_medium,t+h*cmb[i],Y[i],YdotRHS_medium[computedstages]);CHKERRQ(ierr); 9379d6e09e9SHong Zhang /* must be computed after all regions are updated in Y */ 9389d6e09e9SHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slowbuffer,t+h*csb[i],Y[i],YdotRHS_slowbuffer[computedstages]);CHKERRQ(ierr); 93979bc8a77SHong Zhang } 94019c2959aSHong Zhang } 94119c2959aSHong Zhang /* must be computed after fast region and slow region are updated in Y */ 94219c2959aSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_mediumbuffer,t+h*cmb[i],Y[i],YdotRHS_mediumbuffer[i]);CHKERRQ(ierr); 94319c2959aSHong Zhang } 9449d6e09e9SHong Zhang if (!(tab->np == 3 && mprk->is_medium)) { 94519c2959aSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_slowbuffer,t+h*csb[i],Y[i],YdotRHS_slowbuffer[i]);CHKERRQ(ierr); 9469d6e09e9SHong Zhang } 9477c0df07dSHong Zhang ierr = TSComputeRHSFunction(mprk->subts_fast,t+h*cf[i],Y[i],YdotRHS_fast[i]); 9484b84eec9SHong Zhang } 94979bc8a77SHong Zhang 9504b84eec9SHong Zhang ierr = TSEvaluateStep(ts,tab->order,ts->vec_sol,NULL);CHKERRQ(ierr); 9514b84eec9SHong Zhang ts->ptime += ts->time_step; 9524b84eec9SHong Zhang ts->time_step = next_time_step; 9534b84eec9SHong Zhang PetscFunctionReturn(0); 9544b84eec9SHong Zhang } 9554b84eec9SHong Zhang 9564b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauReset(TS ts) 9574b84eec9SHong Zhang { 9584b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 9594b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 9604b84eec9SHong Zhang PetscErrorCode ierr; 9614b84eec9SHong Zhang 9624b84eec9SHong Zhang PetscFunctionBegin; 9634b84eec9SHong Zhang if (!tab) PetscFunctionReturn(0); 9644b84eec9SHong Zhang ierr = PetscFree(mprk->work_fast);CHKERRQ(ierr); 9654b84eec9SHong Zhang ierr = PetscFree(mprk->work_slow);CHKERRQ(ierr); 9667c0df07dSHong Zhang ierr = PetscFree(mprk->work_slowbuffer);CHKERRQ(ierr); 9677c0df07dSHong Zhang ierr = PetscFree(mprk->work_medium);CHKERRQ(ierr); 9687c0df07dSHong Zhang ierr = PetscFree(mprk->work_mediumbuffer);CHKERRQ(ierr); 9694b84eec9SHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->Y);CHKERRQ(ierr); 9704b84eec9SHong Zhang if (mprk->mprkmtype == TSMPRKNONSPLIT) { 9717c0df07dSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS);CHKERRQ(ierr); 9727c0df07dSHong Zhang if (mprk->is_slow) { 9737c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_slow);CHKERRQ(ierr); 9744b84eec9SHong Zhang } 9757c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 9767c0df07dSHong Zhang if (tab->np == 3) { 9777c0df07dSHong Zhang if (mprk->is_medium) { 9787c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_medium);CHKERRQ(ierr); 9797c0df07dSHong Zhang } 9807c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 9817c0df07dSHong Zhang } 9827c0df07dSHong Zhang ierr = PetscFree(mprk->YdotRHS_fast);CHKERRQ(ierr); 9837c0df07dSHong Zhang 9847c0df07dSHong Zhang } else { 9854b84eec9SHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 9864b84eec9SHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 9877c0df07dSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 9887c0df07dSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 9897c0df07dSHong Zhang ierr = VecDestroyVecs(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 9907c0df07dSHong Zhang } 9914b84eec9SHong Zhang PetscFunctionReturn(0); 9924b84eec9SHong Zhang } 9934b84eec9SHong Zhang 9944b84eec9SHong Zhang static PetscErrorCode TSReset_MPRK(TS ts) 9954b84eec9SHong Zhang { 9964b84eec9SHong Zhang PetscErrorCode ierr; 9974b84eec9SHong Zhang 9984b84eec9SHong Zhang PetscFunctionBegin; 9994b84eec9SHong Zhang ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr); 10004b84eec9SHong Zhang PetscFunctionReturn(0); 10014b84eec9SHong Zhang } 10024b84eec9SHong Zhang 10034b84eec9SHong Zhang static PetscErrorCode DMCoarsenHook_TSMPRK(DM fine,DM coarse,void *ctx) 10044b84eec9SHong Zhang { 10054b84eec9SHong Zhang PetscFunctionBegin; 10064b84eec9SHong Zhang PetscFunctionReturn(0); 10074b84eec9SHong Zhang } 10084b84eec9SHong Zhang 10094b84eec9SHong Zhang static PetscErrorCode DMRestrictHook_TSMPRK(DM fine,Mat restrct,Vec rscale,Mat inject,DM coarse,void *ctx) 10104b84eec9SHong Zhang { 10114b84eec9SHong Zhang PetscFunctionBegin; 10124b84eec9SHong Zhang PetscFunctionReturn(0); 10134b84eec9SHong Zhang } 10144b84eec9SHong Zhang 10154b84eec9SHong Zhang static PetscErrorCode DMSubDomainHook_TSMPRK(DM dm,DM subdm,void *ctx) 10164b84eec9SHong Zhang { 10174b84eec9SHong Zhang PetscFunctionBegin; 10184b84eec9SHong Zhang PetscFunctionReturn(0); 10194b84eec9SHong Zhang } 10204b84eec9SHong Zhang 10214b84eec9SHong Zhang static PetscErrorCode DMSubDomainRestrictHook_TSMPRK(DM dm,VecScatter gscat,VecScatter lscat,DM subdm,void *ctx) 10224b84eec9SHong Zhang { 10234b84eec9SHong Zhang PetscFunctionBegin; 10244b84eec9SHong Zhang PetscFunctionReturn(0); 10254b84eec9SHong Zhang } 10264b84eec9SHong Zhang 10274b84eec9SHong Zhang static PetscErrorCode TSMPRKTableauSetUp(TS ts) 10284b84eec9SHong Zhang { 10294b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 10304b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 103119c2959aSHong Zhang Vec YdotRHS_slow,YdotRHS_slowbuffer,YdotRHS_medium,YdotRHS_mediumbuffer,YdotRHS_fast; 10324b84eec9SHong Zhang PetscErrorCode ierr; 10334b84eec9SHong Zhang 10344b84eec9SHong Zhang PetscFunctionBegin; 10354b84eec9SHong Zhang ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->Y);CHKERRQ(ierr); 10367c0df07dSHong Zhang if (mprk->is_slow) { 103719c2959aSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_slow);CHKERRQ(ierr); 10384b84eec9SHong Zhang } 10397c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_slowbuffer);CHKERRQ(ierr); 10407c0df07dSHong Zhang if (tab->np == 3) { 10417c0df07dSHong Zhang if (mprk->is_medium) { 10427c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_medium);CHKERRQ(ierr); 10437c0df07dSHong Zhang } 10447c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_mediumbuffer);CHKERRQ(ierr); 10457c0df07dSHong Zhang } 10467c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->work_fast);CHKERRQ(ierr); 10477c0df07dSHong Zhang 10487c0df07dSHong Zhang if (mprk->mprkmtype == TSMPRKNONSPLIT) { 10497c0df07dSHong Zhang ierr = VecDuplicateVecs(ts->vec_sol,tab->s,&mprk->YdotRHS);CHKERRQ(ierr); 10507c0df07dSHong Zhang if (mprk->is_slow) { 10517c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 10527c0df07dSHong Zhang } 10537c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 10547c0df07dSHong Zhang if (tab->np == 3) { 10557c0df07dSHong Zhang if (mprk->is_medium) { 10567c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 10577c0df07dSHong Zhang } 10587c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 10597c0df07dSHong Zhang } 10607c0df07dSHong Zhang ierr = PetscMalloc1(tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 10617c0df07dSHong Zhang } else { 106219c2959aSHong Zhang if (mprk->is_slow) { 10634b84eec9SHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr); 10644b84eec9SHong Zhang ierr = VecDuplicateVecs(YdotRHS_slow,tab->s,&mprk->YdotRHS_slow);CHKERRQ(ierr); 10654b84eec9SHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slow,&YdotRHS_slow);CHKERRQ(ierr); 106619c2959aSHong Zhang } 106719c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr); 106819c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_slowbuffer,tab->s,&mprk->YdotRHS_slowbuffer);CHKERRQ(ierr); 106919c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_slowbuffer,&YdotRHS_slowbuffer);CHKERRQ(ierr); 107019c2959aSHong Zhang if (tab->np == 3) { 107119c2959aSHong Zhang if (mprk->is_medium) { 107219c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr); 107319c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_medium,tab->s,&mprk->YdotRHS_medium);CHKERRQ(ierr); 107419c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_medium,&YdotRHS_medium);CHKERRQ(ierr); 107519c2959aSHong Zhang } 107619c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr); 107719c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_mediumbuffer,tab->s,&mprk->YdotRHS_mediumbuffer);CHKERRQ(ierr); 107819c2959aSHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_mediumbuffer,&YdotRHS_mediumbuffer);CHKERRQ(ierr); 107919c2959aSHong Zhang } 108019c2959aSHong Zhang ierr = VecGetSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr); 108119c2959aSHong Zhang ierr = VecDuplicateVecs(YdotRHS_fast,tab->s,&mprk->YdotRHS_fast);CHKERRQ(ierr); 10824b84eec9SHong Zhang ierr = VecRestoreSubVector(ts->vec_sol,mprk->is_fast,&YdotRHS_fast);CHKERRQ(ierr); 10834b84eec9SHong Zhang } 10844b84eec9SHong Zhang PetscFunctionReturn(0); 10854b84eec9SHong Zhang } 10864b84eec9SHong Zhang 10874b84eec9SHong Zhang static PetscErrorCode TSSetUp_MPRK(TS ts) 10884b84eec9SHong Zhang { 10894b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 109019c2959aSHong Zhang MPRKTableau tab = mprk->tableau; 10914b84eec9SHong Zhang DM dm; 10924b84eec9SHong Zhang PetscErrorCode ierr; 10934b84eec9SHong Zhang 10944b84eec9SHong Zhang PetscFunctionBegin; 10954b84eec9SHong Zhang ierr = TSRHSSplitGetIS(ts,"slow",&mprk->is_slow);CHKERRQ(ierr); 10964b84eec9SHong Zhang ierr = TSRHSSplitGetIS(ts,"fast",&mprk->is_fast);CHKERRQ(ierr); 109719c2959aSHong Zhang if (!mprk->is_slow || !mprk->is_fast) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'fast' respectively in order to use the method '%s'",tab->name); 109819c2959aSHong Zhang 109919c2959aSHong Zhang if (tab->np == 3) { 110019c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"medium",&mprk->is_medium);CHKERRQ(ierr); 110119c2959aSHong Zhang if (!mprk->is_medium) SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_USER,"Must set up RHSSplits with TSRHSSplitSetIS() using split names 'slow' and 'medium' and 'fast' respectively in order to use the method '%s'",tab->name); 110219c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"mediumbuffer",&mprk->is_mediumbuffer);CHKERRQ(ierr); 110319c2959aSHong Zhang if (!mprk->is_mediumbuffer) { /* let medium buffer cover whole medium region */ 110419c2959aSHong Zhang mprk->is_mediumbuffer = mprk->is_medium; 110519c2959aSHong Zhang mprk->is_medium = NULL; 110619c2959aSHong Zhang } 110719c2959aSHong Zhang } 110819c2959aSHong Zhang 110919c2959aSHong Zhang /* If users do not provide buffer region settings, the solver will do them automatically, but with a performance penalty */ 111019c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"slowbuffer",&mprk->is_slowbuffer);CHKERRQ(ierr); 111119c2959aSHong Zhang if (!mprk->is_slowbuffer) { /* let slow buffer cover whole slow region */ 111219c2959aSHong Zhang mprk->is_slowbuffer = mprk->is_slow; 111319c2959aSHong Zhang mprk->is_slow = NULL; 111419c2959aSHong Zhang } 111519c2959aSHong Zhang /* 111619c2959aSHong Zhang if (!mprk->is_medium) { 111719c2959aSHong Zhang mprk->is_medium = mprk->is_fast; 111819c2959aSHong Zhang mprk->is_fast = NULL; 111919c2959aSHong Zhang } else { 112019c2959aSHong Zhang ierr = TSRHSSplitGetIS(ts,"mediumbuffer",&mprk->is_mediumbuffer);CHKERRQ(ierr); 112119c2959aSHong Zhang } 112219c2959aSHong Zhang */ 11234b84eec9SHong Zhang ierr = TSCheckImplicitTerm(ts);CHKERRQ(ierr); 11244b84eec9SHong Zhang ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr); 11254b84eec9SHong Zhang ierr = TSGetDM(ts,&dm);CHKERRQ(ierr); 11264b84eec9SHong Zhang ierr = DMCoarsenHookAdd(dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 11274b84eec9SHong Zhang ierr = DMSubDomainHookAdd(dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 11284b84eec9SHong Zhang ierr = PetscTryMethod(ts,"TSMPRKSetSplits_C",(TS),(ts));CHKERRQ(ierr); 11294b84eec9SHong Zhang PetscFunctionReturn(0); 11304b84eec9SHong Zhang } 11314b84eec9SHong Zhang 11324b84eec9SHong Zhang /* construct a database to chose nonsplit RHS mutirate mprk method or split RHS MPRK method */ 11334b84eec9SHong Zhang const char *const TSMPRKMultirateTypes[] = {"NONSPLIT","SPLIT","TSMPRKMultirateType","TSMPRK",0}; 11344b84eec9SHong Zhang 11354b84eec9SHong Zhang static PetscErrorCode TSSetFromOptions_MPRK(PetscOptionItems *PetscOptionsObject,TS ts) 11364b84eec9SHong Zhang { 11374b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 11384b84eec9SHong Zhang PetscErrorCode ierr; 11394b84eec9SHong Zhang 11404b84eec9SHong Zhang PetscFunctionBegin; 11414b84eec9SHong Zhang ierr = PetscOptionsHead(PetscOptionsObject,"PRK ODE solver options");CHKERRQ(ierr); 11424b84eec9SHong Zhang { 11434b84eec9SHong Zhang MPRKTableauLink link; 11444b84eec9SHong Zhang PetscInt count,choice; 11454b84eec9SHong Zhang PetscBool flg; 11464b84eec9SHong Zhang const char **namelist; 11474b84eec9SHong Zhang PetscInt mprkmtype = 0; 11484b84eec9SHong Zhang for (link=MPRKTableauList,count=0; link; link=link->next,count++) ; 11494b84eec9SHong Zhang ierr = PetscMalloc1(count,(char***)&namelist);CHKERRQ(ierr); 11504b84eec9SHong Zhang for (link=MPRKTableauList,count=0; link; link=link->next,count++) namelist[count] = link->tab.name; 11514b84eec9SHong Zhang ierr = PetscOptionsEList("-ts_mprk_type","Family of MPRK method","TSMPRKSetType",(const char*const*)namelist,count,mprk->tableau->name,&choice,&flg);CHKERRQ(ierr); 11524b84eec9SHong Zhang if (flg) {ierr = TSMPRKSetType(ts,namelist[choice]);CHKERRQ(ierr);} 11534b84eec9SHong Zhang ierr = PetscFree(namelist);CHKERRQ(ierr); 11544b84eec9SHong Zhang ierr = PetscOptionsEList("-ts_mprk_multirate_type","Use Combined RHS Multirate or Partioned RHS Multirat MPRK method","TSMPRKSetMultirateType",TSMPRKMultirateTypes,2,TSMPRKMultirateTypes[0],&mprkmtype,&flg);CHKERRQ(ierr); 11554b84eec9SHong Zhang if (flg) {ierr = TSMPRKSetMultirateType(ts,mprkmtype);CHKERRQ(ierr);} 11564b84eec9SHong Zhang } 11574b84eec9SHong Zhang ierr = PetscOptionsTail();CHKERRQ(ierr); 11584b84eec9SHong Zhang PetscFunctionReturn(0); 11594b84eec9SHong Zhang } 11604b84eec9SHong Zhang 11614b84eec9SHong Zhang static PetscErrorCode TSView_MPRK(TS ts,PetscViewer viewer) 11624b84eec9SHong Zhang { 11634b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 11644b84eec9SHong Zhang PetscBool iascii; 11654b84eec9SHong Zhang PetscErrorCode ierr; 11664b84eec9SHong Zhang 11674b84eec9SHong Zhang PetscFunctionBegin; 11684b84eec9SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 11694b84eec9SHong Zhang if (iascii) { 11704b84eec9SHong Zhang MPRKTableau tab = mprk->tableau; 11714b84eec9SHong Zhang TSMPRKType mprktype; 11724b84eec9SHong Zhang char fbuf[512]; 11734b84eec9SHong Zhang char sbuf[512]; 117419c2959aSHong Zhang PetscInt i; 11754b84eec9SHong Zhang ierr = TSMPRKGetType(ts,&mprktype);CHKERRQ(ierr); 11764b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," MPRK type %s\n",mprktype);CHKERRQ(ierr); 11774b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Order: %D\n",tab->order);CHKERRQ(ierr); 117819c2959aSHong Zhang 11794b84eec9SHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->cf);CHKERRQ(ierr); 11804b84eec9SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa cf = %s\n",fbuf);CHKERRQ(ierr); 118119c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Af = \n");CHKERRQ(ierr); 118219c2959aSHong Zhang for (i=0; i<tab->s; i++) { 118319c2959aSHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,&tab->Af[i*tab->s]);CHKERRQ(ierr); 118419c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",fbuf);CHKERRQ(ierr); 118519c2959aSHong Zhang } 118619c2959aSHong Zhang ierr = PetscFormatRealArray(fbuf,sizeof(fbuf),"% 8.6f",tab->s,tab->bf);CHKERRQ(ierr); 118719c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bf = %s\n",fbuf);CHKERRQ(ierr); 118819c2959aSHong Zhang 118919c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->csb);CHKERRQ(ierr); 119019c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa csb = %s\n",sbuf);CHKERRQ(ierr); 119119c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Asb = \n");CHKERRQ(ierr); 119219c2959aSHong Zhang for (i=0; i<tab->s; i++) { 119319c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,&tab->Asb[i*tab->s]);CHKERRQ(ierr); 119419c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",sbuf);CHKERRQ(ierr); 119519c2959aSHong Zhang } 119619c2959aSHong Zhang ierr = PetscFormatRealArray(sbuf,sizeof(sbuf),"% 8.6f",tab->s,tab->bsb);CHKERRQ(ierr); 119719c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bsb = %s\n",sbuf);CHKERRQ(ierr); 119819c2959aSHong Zhang 119919c2959aSHong Zhang if (tab->np == 3) { 120019c2959aSHong Zhang char mbuf[512]; 120119c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->cmb);CHKERRQ(ierr); 120219c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Abscissa cmb = %s\n",mbuf);CHKERRQ(ierr); 120319c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Amb = \n");CHKERRQ(ierr); 120419c2959aSHong Zhang for (i=0; i<tab->s; i++) { 120519c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,&tab->Amb[i*tab->s]);CHKERRQ(ierr); 120619c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," %s\n",mbuf);CHKERRQ(ierr); 120719c2959aSHong Zhang } 120819c2959aSHong Zhang ierr = PetscFormatRealArray(mbuf,sizeof(mbuf),"% 8.6f",tab->s,tab->bmb);CHKERRQ(ierr); 120919c2959aSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," bmb = %s\n",mbuf);CHKERRQ(ierr); 121019c2959aSHong Zhang } 12114b84eec9SHong Zhang } 12124b84eec9SHong Zhang PetscFunctionReturn(0); 12134b84eec9SHong Zhang } 12144b84eec9SHong Zhang 12154b84eec9SHong Zhang static PetscErrorCode TSLoad_MPRK(TS ts,PetscViewer viewer) 12164b84eec9SHong Zhang { 12174b84eec9SHong Zhang PetscErrorCode ierr; 12184b84eec9SHong Zhang TSAdapt adapt; 12194b84eec9SHong Zhang 12204b84eec9SHong Zhang PetscFunctionBegin; 12214b84eec9SHong Zhang ierr = TSGetAdapt(ts,&adapt);CHKERRQ(ierr); 12224b84eec9SHong Zhang ierr = TSAdaptLoad(adapt,viewer);CHKERRQ(ierr); 12234b84eec9SHong Zhang PetscFunctionReturn(0); 12244b84eec9SHong Zhang } 12254b84eec9SHong Zhang 12264b84eec9SHong Zhang /*@C 12274b84eec9SHong Zhang TSMPRKSetType - Set the type of MPRK scheme 12284b84eec9SHong Zhang 12294b84eec9SHong Zhang Logically collective 12304b84eec9SHong Zhang 12314b84eec9SHong Zhang Input Parameter: 12324b84eec9SHong Zhang + ts - timestepping context 12334b84eec9SHong Zhang - mprktype - type of MPRK-scheme 12344b84eec9SHong Zhang 12354b84eec9SHong Zhang Options Database: 12364b84eec9SHong Zhang . -ts_mprk_type - <pm2,p2,p3> 12374b84eec9SHong Zhang 12384b84eec9SHong Zhang Level: intermediate 12394b84eec9SHong Zhang 12404b84eec9SHong Zhang .seealso: TSMPRKGetType(), TSMPRK, TSMPRKType 12414b84eec9SHong Zhang @*/ 12424b84eec9SHong Zhang PetscErrorCode TSMPRKSetType(TS ts,TSMPRKType mprktype) 12434b84eec9SHong Zhang { 12444b84eec9SHong Zhang PetscErrorCode ierr; 12454b84eec9SHong Zhang 12464b84eec9SHong Zhang PetscFunctionBegin; 12474b84eec9SHong Zhang PetscValidHeaderSpecific(ts,TS_CLASSID,1); 12484b84eec9SHong Zhang PetscValidCharPointer(mprktype,2); 12494b84eec9SHong Zhang ierr = PetscTryMethod(ts,"TSMPRKSetType_C",(TS,TSMPRKType),(ts,mprktype));CHKERRQ(ierr); 12504b84eec9SHong Zhang PetscFunctionReturn(0); 12514b84eec9SHong Zhang } 12524b84eec9SHong Zhang 12534b84eec9SHong Zhang /*@C 12544b84eec9SHong Zhang TSMPRKGetType - Get the type of MPRK scheme 12554b84eec9SHong Zhang 12564b84eec9SHong Zhang Logically collective 12574b84eec9SHong Zhang 12584b84eec9SHong Zhang Input Parameter: 12594b84eec9SHong Zhang . ts - timestepping context 12604b84eec9SHong Zhang 12614b84eec9SHong Zhang Output Parameter: 12624b84eec9SHong Zhang . mprktype - type of MPRK-scheme 12634b84eec9SHong Zhang 12644b84eec9SHong Zhang Level: intermediate 12654b84eec9SHong Zhang 12664b84eec9SHong Zhang .seealso: TSMPRKGetType() 12674b84eec9SHong Zhang @*/ 12684b84eec9SHong Zhang PetscErrorCode TSMPRKGetType(TS ts,TSMPRKType *mprktype) 12694b84eec9SHong Zhang { 12704b84eec9SHong Zhang PetscErrorCode ierr; 12714b84eec9SHong Zhang 12724b84eec9SHong Zhang PetscFunctionBegin; 12734b84eec9SHong Zhang PetscValidHeaderSpecific(ts,TS_CLASSID,1); 12744b84eec9SHong Zhang ierr = PetscUseMethod(ts,"TSMPRKGetType_C",(TS,TSMPRKType*),(ts,mprktype));CHKERRQ(ierr); 12754b84eec9SHong Zhang PetscFunctionReturn(0); 12764b84eec9SHong Zhang } 12774b84eec9SHong Zhang 12784b84eec9SHong Zhang /*@C 12794b84eec9SHong Zhang TSMPRKSetMultirateType - Set the type of MPRK multirate scheme 12804b84eec9SHong Zhang 12814b84eec9SHong Zhang Logically collective 12824b84eec9SHong Zhang 12834b84eec9SHong Zhang Input Parameter: 12844b84eec9SHong Zhang + ts - timestepping context 12854b84eec9SHong Zhang - mprkmtype - type of the multirate configuration 12864b84eec9SHong Zhang 12874b84eec9SHong Zhang Options Database: 12884b84eec9SHong Zhang . -ts_mprk_multirate_type - <nonsplit,split> 12894b84eec9SHong Zhang 12904b84eec9SHong Zhang Level: intermediate 12914b84eec9SHong Zhang @*/ 12924b84eec9SHong Zhang PetscErrorCode TSMPRKSetMultirateType(TS ts, TSMPRKMultirateType mprkmtype) 12934b84eec9SHong Zhang { 12944b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 12954b84eec9SHong Zhang PetscErrorCode ierr; 12964b84eec9SHong Zhang 12974b84eec9SHong Zhang PetscFunctionBegin; 12984b84eec9SHong Zhang PetscValidHeaderSpecific(ts,TS_CLASSID,1); 12994b84eec9SHong Zhang switch(mprkmtype){ 13004b84eec9SHong Zhang case TSMPRKNONSPLIT: 13014b84eec9SHong Zhang ts->ops->step = TSStep_MPRK; 13024b84eec9SHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRK; 13034b84eec9SHong Zhang break; 13044b84eec9SHong Zhang case TSMPRKSPLIT: 13054b84eec9SHong Zhang ts->ops->step = TSStep_MPRKSPLIT; 13064b84eec9SHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRKSPLIT; 13074b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetSplits_C",TSMPRKSetSplits);CHKERRQ(ierr); 13084b84eec9SHong Zhang break; 13094b84eec9SHong Zhang default : 13104b84eec9SHong Zhang SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Unknown type '%s'",mprkmtype); 13114b84eec9SHong Zhang } 13124b84eec9SHong Zhang mprk->mprkmtype = mprkmtype; 13134b84eec9SHong Zhang PetscFunctionReturn(0); 13144b84eec9SHong Zhang } 13154b84eec9SHong Zhang 13164b84eec9SHong Zhang static PetscErrorCode TSMPRKGetType_MPRK(TS ts,TSMPRKType *mprktype) 13174b84eec9SHong Zhang { 13184b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 13194b84eec9SHong Zhang 13204b84eec9SHong Zhang PetscFunctionBegin; 13214b84eec9SHong Zhang *mprktype = mprk->tableau->name; 13224b84eec9SHong Zhang PetscFunctionReturn(0); 13234b84eec9SHong Zhang } 13244b84eec9SHong Zhang 13254b84eec9SHong Zhang static PetscErrorCode TSMPRKSetType_MPRK(TS ts,TSMPRKType mprktype) 13264b84eec9SHong Zhang { 13274b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 13284b84eec9SHong Zhang PetscBool match; 13294b84eec9SHong Zhang MPRKTableauLink link; 13304b84eec9SHong Zhang PetscErrorCode ierr; 13314b84eec9SHong Zhang 13324b84eec9SHong Zhang PetscFunctionBegin; 13334b84eec9SHong Zhang if (mprk->tableau) { 13344b84eec9SHong Zhang ierr = PetscStrcmp(mprk->tableau->name,mprktype,&match);CHKERRQ(ierr); 13354b84eec9SHong Zhang if (match) PetscFunctionReturn(0); 13364b84eec9SHong Zhang } 13374b84eec9SHong Zhang for (link = MPRKTableauList; link; link=link->next) { 13384b84eec9SHong Zhang ierr = PetscStrcmp(link->tab.name,mprktype,&match);CHKERRQ(ierr); 13394b84eec9SHong Zhang if (match) { 13404b84eec9SHong Zhang if (ts->setupcalled) {ierr = TSMPRKTableauReset(ts);CHKERRQ(ierr);} 13414b84eec9SHong Zhang mprk->tableau = &link->tab; 13424b84eec9SHong Zhang if (ts->setupcalled) {ierr = TSMPRKTableauSetUp(ts);CHKERRQ(ierr);} 13434b84eec9SHong Zhang PetscFunctionReturn(0); 13444b84eec9SHong Zhang } 13454b84eec9SHong Zhang } 13464b84eec9SHong Zhang SETERRQ1(PetscObjectComm((PetscObject)ts),PETSC_ERR_ARG_UNKNOWN_TYPE,"Could not find '%s'",mprktype); 13474b84eec9SHong Zhang PetscFunctionReturn(0); 13484b84eec9SHong Zhang } 13494b84eec9SHong Zhang 13504b84eec9SHong Zhang static PetscErrorCode TSGetStages_MPRK(TS ts,PetscInt *ns,Vec **Y) 13514b84eec9SHong Zhang { 13524b84eec9SHong Zhang TS_MPRK *mprk = (TS_MPRK*)ts->data; 13534b84eec9SHong Zhang 13544b84eec9SHong Zhang PetscFunctionBegin; 13554b84eec9SHong Zhang *ns = mprk->tableau->s; 13564b84eec9SHong Zhang if (Y) *Y = mprk->Y; 13574b84eec9SHong Zhang PetscFunctionReturn(0); 13584b84eec9SHong Zhang } 13594b84eec9SHong Zhang 13604b84eec9SHong Zhang static PetscErrorCode TSDestroy_MPRK(TS ts) 13614b84eec9SHong Zhang { 13624b84eec9SHong Zhang PetscErrorCode ierr; 13634b84eec9SHong Zhang 13644b84eec9SHong Zhang PetscFunctionBegin; 13654b84eec9SHong Zhang ierr = TSReset_MPRK(ts);CHKERRQ(ierr); 13664b84eec9SHong Zhang if (ts->dm) { 13674b84eec9SHong Zhang ierr = DMCoarsenHookRemove(ts->dm,DMCoarsenHook_TSMPRK,DMRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 13684b84eec9SHong Zhang ierr = DMSubDomainHookRemove(ts->dm,DMSubDomainHook_TSMPRK,DMSubDomainRestrictHook_TSMPRK,ts);CHKERRQ(ierr); 13694b84eec9SHong Zhang } 13704b84eec9SHong Zhang ierr = PetscFree(ts->data);CHKERRQ(ierr); 13714b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",NULL);CHKERRQ(ierr); 13724b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",NULL);CHKERRQ(ierr); 13734b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetMultirateType_C",NULL);CHKERRQ(ierr); 13744b84eec9SHong Zhang PetscFunctionReturn(0); 13754b84eec9SHong Zhang } 13764b84eec9SHong Zhang 13774b84eec9SHong Zhang /*MC 13784b84eec9SHong Zhang TSMPRK - ODE solver using Partitioned Runge-Kutta schemes 13794b84eec9SHong Zhang 13804b84eec9SHong Zhang The user should provide the right hand side of the equation 13814b84eec9SHong Zhang using TSSetRHSFunction(). 13824b84eec9SHong Zhang 13834b84eec9SHong Zhang Notes: 13844b84eec9SHong Zhang The default is TSMPRKPM2, it can be changed with TSRKSetType() or -ts_mprk_type 13854b84eec9SHong Zhang 13864b84eec9SHong Zhang Level: beginner 13874b84eec9SHong Zhang 13884b84eec9SHong Zhang .seealso: TSCreate(), TS, TSSetType(), TSMPRKSetType(), TSMPRKGetType(), TSMPRKType, TSMPRKRegister(), TSMPRKSetMultirateType() 13894b84eec9SHong Zhang TSMPRKM2, TSMPRKM3, TSMPRKRFSMR3, TSMPRKRFSMR2 13904b84eec9SHong Zhang 13914b84eec9SHong Zhang M*/ 13924b84eec9SHong Zhang PETSC_EXTERN PetscErrorCode TSCreate_MPRK(TS ts) 13934b84eec9SHong Zhang { 13944b84eec9SHong Zhang TS_MPRK *mprk; 13954b84eec9SHong Zhang PetscErrorCode ierr; 13964b84eec9SHong Zhang 13974b84eec9SHong Zhang PetscFunctionBegin; 13984b84eec9SHong Zhang ierr = TSMPRKInitializePackage();CHKERRQ(ierr); 13994b84eec9SHong Zhang 14004b84eec9SHong Zhang ts->ops->reset = TSReset_MPRK; 14014b84eec9SHong Zhang ts->ops->destroy = TSDestroy_MPRK; 14024b84eec9SHong Zhang ts->ops->view = TSView_MPRK; 14034b84eec9SHong Zhang ts->ops->load = TSLoad_MPRK; 14044b84eec9SHong Zhang ts->ops->setup = TSSetUp_MPRK; 14054b84eec9SHong Zhang ts->ops->step = TSStep_MPRK; 14064b84eec9SHong Zhang ts->ops->evaluatestep = TSEvaluateStep_MPRK; 14074b84eec9SHong Zhang ts->ops->setfromoptions = TSSetFromOptions_MPRK; 14084b84eec9SHong Zhang ts->ops->getstages = TSGetStages_MPRK; 14094b84eec9SHong Zhang 14104b84eec9SHong Zhang ierr = PetscNewLog(ts,&mprk);CHKERRQ(ierr); 14114b84eec9SHong Zhang ts->data = (void*)mprk; 14124b84eec9SHong Zhang 14134b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKGetType_C",TSMPRKGetType_MPRK);CHKERRQ(ierr); 14144b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetType_C",TSMPRKSetType_MPRK);CHKERRQ(ierr); 14154b84eec9SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)ts,"TSMPRKSetMultirateType_C",TSMPRKSetMultirateType);CHKERRQ(ierr); 14164b84eec9SHong Zhang 14174b84eec9SHong Zhang ierr = TSMPRKSetType(ts,TSMPRKDefault);CHKERRQ(ierr); 14184b84eec9SHong Zhang PetscFunctionReturn(0); 14194b84eec9SHong Zhang } 1420