xref: /petsc/src/ts/interface/tsmon.c (revision 648c30bcb65f74c3cbd15d7a91a7ed7c1890e25b)
1d0c080abSJoseph Pusztay #include <petsc/private/tsimpl.h> /*I "petscts.h"  I*/
2d0c080abSJoseph Pusztay #include <petscdm.h>
307eaae0cSMatthew G. Knepley #include <petscds.h>
4ab43fcacSJoe Pusztay #include <petscdmswarm.h>
5d0c080abSJoseph Pusztay #include <petscdraw.h>
6d0c080abSJoseph Pusztay 
7d0c080abSJoseph Pusztay /*@C
8bcf0153eSBarry Smith   TSMonitor - Runs all user-provided monitor routines set using `TSMonitorSet()`
9d0c080abSJoseph Pusztay 
10c3339decSBarry Smith   Collective
11d0c080abSJoseph Pusztay 
12d0c080abSJoseph Pusztay   Input Parameters:
13bcf0153eSBarry Smith + ts    - time stepping context obtained from `TSCreate()`
14d0c080abSJoseph Pusztay . step  - step number that has just completed
15d0c080abSJoseph Pusztay . ptime - model time of the state
16d0c080abSJoseph Pusztay - u     - state at the current model time
17d0c080abSJoseph Pusztay 
18bcf0153eSBarry Smith   Level: developer
19bcf0153eSBarry Smith 
20d0c080abSJoseph Pusztay   Notes:
21bcf0153eSBarry Smith   `TSMonitor()` is typically used automatically within the time stepping implementations.
22d0c080abSJoseph Pusztay   Users would almost never call this routine directly.
23d0c080abSJoseph Pusztay 
24d0c080abSJoseph Pusztay   A step of -1 indicates that the monitor is being called on a solution obtained by interpolating from computed solutions
25d0c080abSJoseph Pusztay 
26bcf0153eSBarry Smith .seealso: `TS`, `TSMonitorSet()`, `TSMonitorSetFromOptions()`
27d0c080abSJoseph Pusztay @*/
28d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitor(TS ts, PetscInt step, PetscReal ptime, Vec u)
29d71ae5a4SJacob Faibussowitsch {
30d0c080abSJoseph Pusztay   DM       dm;
31d0c080abSJoseph Pusztay   PetscInt i, n = ts->numbermonitors;
32d0c080abSJoseph Pusztay 
33d0c080abSJoseph Pusztay   PetscFunctionBegin;
34d0c080abSJoseph Pusztay   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
35d0c080abSJoseph Pusztay   PetscValidHeaderSpecific(u, VEC_CLASSID, 4);
36d0c080abSJoseph Pusztay 
379566063dSJacob Faibussowitsch   PetscCall(TSGetDM(ts, &dm));
389566063dSJacob Faibussowitsch   PetscCall(DMSetOutputSequenceNumber(dm, step, ptime));
39d0c080abSJoseph Pusztay 
409566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(u));
4148a46eb9SPierre Jolivet   for (i = 0; i < n; i++) PetscCall((*ts->monitor[i])(ts, step, ptime, u, ts->monitorcontext[i]));
429566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(u));
433ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
44d0c080abSJoseph Pusztay }
45d0c080abSJoseph Pusztay 
46d0c080abSJoseph Pusztay /*@C
47d0c080abSJoseph Pusztay   TSMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user
48d0c080abSJoseph Pusztay 
49c3339decSBarry Smith   Collective
50d0c080abSJoseph Pusztay 
51d0c080abSJoseph Pusztay   Input Parameters:
52bcf0153eSBarry Smith + ts           - `TS` object you wish to monitor
53d0c080abSJoseph Pusztay . name         - the monitor type one is seeking
54d0c080abSJoseph Pusztay . help         - message indicating what monitoring is done
55d0c080abSJoseph Pusztay . manual       - manual page for the monitor
56d0c080abSJoseph Pusztay . monitor      - the monitor function
57bcf0153eSBarry Smith - monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `TS` or `PetscViewer` objects
58d0c080abSJoseph Pusztay 
59d0c080abSJoseph Pusztay   Level: developer
60d0c080abSJoseph Pusztay 
61*648c30bcSBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `PetscOptionsCreateViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`,
62db781477SPatrick Sanan           `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()`
63b43aa488SJacob Faibussowitsch           `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`,
64db781477SPatrick Sanan           `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`,
65c2e3fba1SPatrick Sanan           `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`,
66db781477SPatrick Sanan           `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`,
67db781477SPatrick Sanan           `PetscOptionsFList()`, `PetscOptionsEList()`
68d0c080abSJoseph Pusztay @*/
69d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSetFromOptions(TS ts, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(TS, PetscInt, PetscReal, Vec, PetscViewerAndFormat *), PetscErrorCode (*monitorsetup)(TS, PetscViewerAndFormat *))
70d71ae5a4SJacob Faibussowitsch {
71d0c080abSJoseph Pusztay   PetscViewer       viewer;
72d0c080abSJoseph Pusztay   PetscViewerFormat format;
73d0c080abSJoseph Pusztay   PetscBool         flg;
74d0c080abSJoseph Pusztay 
75d0c080abSJoseph Pusztay   PetscFunctionBegin;
76*648c30bcSBarry Smith   PetscCall(PetscOptionsCreateViewer(PetscObjectComm((PetscObject)ts), ((PetscObject)ts)->options, ((PetscObject)ts)->prefix, name, &viewer, &format, &flg));
77d0c080abSJoseph Pusztay   if (flg) {
78d0c080abSJoseph Pusztay     PetscViewerAndFormat *vf;
799812b6beSJed Brown     char                  interval_key[1024];
809566063dSJacob Faibussowitsch     PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf));
819812b6beSJed Brown     PetscCall(PetscSNPrintf(interval_key, sizeof interval_key, "%s_interval", name));
829812b6beSJed Brown     PetscCall(PetscOptionsGetInt(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, interval_key, &vf->view_interval, NULL));
83*648c30bcSBarry Smith     PetscCall(PetscViewerDestroy(&viewer));
841baa6e33SBarry Smith     if (monitorsetup) PetscCall((*monitorsetup)(ts, vf));
859566063dSJacob Faibussowitsch     PetscCall(TSMonitorSet(ts, (PetscErrorCode(*)(TS, PetscInt, PetscReal, Vec, void *))monitor, vf, (PetscErrorCode(*)(void **))PetscViewerAndFormatDestroy));
86d0c080abSJoseph Pusztay   }
873ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
88d0c080abSJoseph Pusztay }
89d0c080abSJoseph Pusztay 
90d0c080abSJoseph Pusztay /*@C
91d0c080abSJoseph Pusztay   TSMonitorSet - Sets an ADDITIONAL function that is to be used at every
92d0c080abSJoseph Pusztay   timestep to display the iteration's  progress.
93d0c080abSJoseph Pusztay 
94c3339decSBarry Smith   Logically Collective
95d0c080abSJoseph Pusztay 
96d0c080abSJoseph Pusztay   Input Parameters:
97bcf0153eSBarry Smith + ts       - the `TS` context obtained from `TSCreate()`
98d0c080abSJoseph Pusztay . monitor  - monitoring routine
99195e9b02SBarry Smith . mctx     - [optional] user-defined context for private data for the monitor routine (use `NULL` if no context is desired)
10014d0ab18SJacob Faibussowitsch - mdestroy - [optional] routine that frees monitor context (may be `NULL`)
101d0c080abSJoseph Pusztay 
10220f4b53cSBarry Smith   Calling sequence of `monitor`:
10320f4b53cSBarry Smith + ts    - the `TS` context
104d0c080abSJoseph Pusztay . steps - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time)
105d0c080abSJoseph Pusztay . time  - current time
106d0c080abSJoseph Pusztay . u     - current iterate
10714d0ab18SJacob Faibussowitsch - ctx   - [optional] monitoring context
108d0c080abSJoseph Pusztay 
109bcf0153eSBarry Smith   Level: intermediate
110bcf0153eSBarry Smith 
111bcf0153eSBarry Smith   Note:
112195e9b02SBarry Smith   This routine adds an additional monitor to the list of monitors that already has been loaded.
113d0c080abSJoseph Pusztay 
114b43aa488SJacob Faibussowitsch   Fortran Notes:
115bcf0153eSBarry Smith   Only a single monitor function can be set for each `TS` object
116d0c080abSJoseph Pusztay 
1171cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorDefault()`, `TSMonitorCancel()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`,
1183a61192cSBarry Smith           `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`,
119b43aa488SJacob Faibussowitsch           `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()`
120d0c080abSJoseph Pusztay @*/
12114d0ab18SJacob Faibussowitsch PetscErrorCode TSMonitorSet(TS ts, PetscErrorCode (*monitor)(TS ts, PetscInt steps, PetscReal time, Vec u, void *ctx), void *mctx, PetscErrorCode (*mdestroy)(void **))
122d71ae5a4SJacob Faibussowitsch {
123d0c080abSJoseph Pusztay   PetscInt  i;
124d0c080abSJoseph Pusztay   PetscBool identical;
125d0c080abSJoseph Pusztay 
126d0c080abSJoseph Pusztay   PetscFunctionBegin;
127d0c080abSJoseph Pusztay   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
128d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
1299566063dSJacob Faibussowitsch     PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))monitor, mctx, mdestroy, (PetscErrorCode(*)(void))ts->monitor[i], ts->monitorcontext[i], ts->monitordestroy[i], &identical));
1303ba16761SJacob Faibussowitsch     if (identical) PetscFunctionReturn(PETSC_SUCCESS);
131d0c080abSJoseph Pusztay   }
1323c633725SBarry Smith   PetscCheck(ts->numbermonitors < MAXTSMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set");
133d0c080abSJoseph Pusztay   ts->monitor[ts->numbermonitors]          = monitor;
134d0c080abSJoseph Pusztay   ts->monitordestroy[ts->numbermonitors]   = mdestroy;
135d0c080abSJoseph Pusztay   ts->monitorcontext[ts->numbermonitors++] = (void *)mctx;
1363ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
137d0c080abSJoseph Pusztay }
138d0c080abSJoseph Pusztay 
139d0c080abSJoseph Pusztay /*@C
140d0c080abSJoseph Pusztay   TSMonitorCancel - Clears all the monitors that have been set on a time-step object.
141d0c080abSJoseph Pusztay 
142c3339decSBarry Smith   Logically Collective
143d0c080abSJoseph Pusztay 
1442fe279fdSBarry Smith   Input Parameter:
145bcf0153eSBarry Smith . ts - the `TS` context obtained from `TSCreate()`
146d0c080abSJoseph Pusztay 
147d0c080abSJoseph Pusztay   Level: intermediate
148d0c080abSJoseph Pusztay 
149bcf0153eSBarry Smith   Note:
150bcf0153eSBarry Smith   There is no way to remove a single, specific monitor.
151bcf0153eSBarry Smith 
1521cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorDefault()`, `TSMonitorSet()`
153d0c080abSJoseph Pusztay @*/
154d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorCancel(TS ts)
155d71ae5a4SJacob Faibussowitsch {
156d0c080abSJoseph Pusztay   PetscInt i;
157d0c080abSJoseph Pusztay 
158d0c080abSJoseph Pusztay   PetscFunctionBegin;
159d0c080abSJoseph Pusztay   PetscValidHeaderSpecific(ts, TS_CLASSID, 1);
160d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
16148a46eb9SPierre Jolivet     if (ts->monitordestroy[i]) PetscCall((*ts->monitordestroy[i])(&ts->monitorcontext[i]));
162d0c080abSJoseph Pusztay   }
163d0c080abSJoseph Pusztay   ts->numbermonitors = 0;
1643ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
165d0c080abSJoseph Pusztay }
166d0c080abSJoseph Pusztay 
167d0c080abSJoseph Pusztay /*@C
168195e9b02SBarry Smith   TSMonitorDefault - The default monitor, prints the timestep and time for each step
169d0c080abSJoseph Pusztay 
17014d0ab18SJacob Faibussowitsch   Input Parameters:
17114d0ab18SJacob Faibussowitsch + ts    - the `TS` context
17214d0ab18SJacob Faibussowitsch . step  - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time)
17314d0ab18SJacob Faibussowitsch . ptime - current time
17414d0ab18SJacob Faibussowitsch . v     - current iterate
17514d0ab18SJacob Faibussowitsch - vf    - the viewer and format
17614d0ab18SJacob Faibussowitsch 
177bcf0153eSBarry Smith   Options Database Key:
1783a61192cSBarry Smith . -ts_monitor - monitors the time integration
1793a61192cSBarry Smith 
180d0c080abSJoseph Pusztay   Level: intermediate
181d0c080abSJoseph Pusztay 
182bcf0153eSBarry Smith   Notes:
183bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
184bcf0153eSBarry Smith   to be used during the `TS` integration.
185bcf0153eSBarry Smith 
1861cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`,
1873a61192cSBarry Smith           `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`,
188b43aa488SJacob Faibussowitsch           `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()`
189d0c080abSJoseph Pusztay @*/
190d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDefault(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf)
191d71ae5a4SJacob Faibussowitsch {
192d0c080abSJoseph Pusztay   PetscViewer viewer = vf->viewer;
193d0c080abSJoseph Pusztay   PetscBool   iascii, ibinary;
194d0c080abSJoseph Pusztay 
195d0c080abSJoseph Pusztay   PetscFunctionBegin;
196064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5);
1979566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
1989566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &ibinary));
1999566063dSJacob Faibussowitsch   PetscCall(PetscViewerPushFormat(viewer, vf->format));
200d0c080abSJoseph Pusztay   if (iascii) {
2019566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel));
202d0c080abSJoseph Pusztay     if (step == -1) { /* this indicates it is an interpolated solution */
20363a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "Interpolated solution at time %g between steps %" PetscInt_FMT " and %" PetscInt_FMT "\n", (double)ptime, ts->steps - 1, ts->steps));
204d0c080abSJoseph Pusztay     } else {
20563a3b9bcSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)\n" : "\n"));
206d0c080abSJoseph Pusztay     }
2079566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel));
208d0c080abSJoseph Pusztay   } else if (ibinary) {
209d0c080abSJoseph Pusztay     PetscMPIInt rank;
2109566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank));
211c5853193SPierre Jolivet     if (rank == 0) {
212d0c080abSJoseph Pusztay       PetscBool skipHeader;
213d0c080abSJoseph Pusztay       PetscInt  classid = REAL_FILE_CLASSID;
214d0c080abSJoseph Pusztay 
2159566063dSJacob Faibussowitsch       PetscCall(PetscViewerBinaryGetSkipHeader(viewer, &skipHeader));
21648a46eb9SPierre Jolivet       if (!skipHeader) PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT));
2179566063dSJacob Faibussowitsch       PetscCall(PetscRealView(1, &ptime, viewer));
218d0c080abSJoseph Pusztay     } else {
2199566063dSJacob Faibussowitsch       PetscCall(PetscRealView(0, &ptime, viewer));
220d0c080abSJoseph Pusztay     }
221d0c080abSJoseph Pusztay   }
2229566063dSJacob Faibussowitsch   PetscCall(PetscViewerPopFormat(viewer));
2233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
224d0c080abSJoseph Pusztay }
225d0c080abSJoseph Pusztay 
226d0c080abSJoseph Pusztay /*@C
227d0c080abSJoseph Pusztay   TSMonitorExtreme - Prints the extreme values of the solution at each timestep
228d0c080abSJoseph Pusztay 
22914d0ab18SJacob Faibussowitsch   Input Parameters:
23014d0ab18SJacob Faibussowitsch + ts    - the `TS` context
23114d0ab18SJacob Faibussowitsch . step  - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time)
23214d0ab18SJacob Faibussowitsch . ptime - current time
23314d0ab18SJacob Faibussowitsch . v     - current iterate
23414d0ab18SJacob Faibussowitsch - vf    - the viewer and format
23514d0ab18SJacob Faibussowitsch 
236bcf0153eSBarry Smith   Level: intermediate
237bcf0153eSBarry Smith 
238195e9b02SBarry Smith   Note:
2393a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
240195e9b02SBarry Smith   to be used during the `TS` integration.
2413a61192cSBarry Smith 
2421cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`
243d0c080abSJoseph Pusztay @*/
244d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorExtreme(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf)
245d71ae5a4SJacob Faibussowitsch {
246d0c080abSJoseph Pusztay   PetscViewer viewer = vf->viewer;
247d0c080abSJoseph Pusztay   PetscBool   iascii;
248d0c080abSJoseph Pusztay   PetscReal   max, min;
249d0c080abSJoseph Pusztay 
250d0c080abSJoseph Pusztay   PetscFunctionBegin;
251064a246eSJacob Faibussowitsch   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5);
2529566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
2539566063dSJacob Faibussowitsch   PetscCall(PetscViewerPushFormat(viewer, vf->format));
254d0c080abSJoseph Pusztay   if (iascii) {
2559566063dSJacob Faibussowitsch     PetscCall(VecMax(v, NULL, &max));
2569566063dSJacob Faibussowitsch     PetscCall(VecMin(v, NULL, &min));
2579566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel));
25863a3b9bcSJacob Faibussowitsch     PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s max %g min %g\n", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)" : "", (double)max, (double)min));
2599566063dSJacob Faibussowitsch     PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel));
260d0c080abSJoseph Pusztay   }
2619566063dSJacob Faibussowitsch   PetscCall(PetscViewerPopFormat(viewer));
2623ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
263d0c080abSJoseph Pusztay }
264d0c080abSJoseph Pusztay 
265d0c080abSJoseph Pusztay /*@C
266bcf0153eSBarry Smith   TSMonitorLGCtxCreate - Creates a `TSMonitorLGCtx` context for use with
267bcf0153eSBarry Smith   `TS` to monitor the solution process graphically in various ways
268d0c080abSJoseph Pusztay 
269c3339decSBarry Smith   Collective
270d0c080abSJoseph Pusztay 
271d0c080abSJoseph Pusztay   Input Parameters:
27214d0ab18SJacob Faibussowitsch + comm     - the MPI communicator to use
27314d0ab18SJacob Faibussowitsch . host     - the X display to open, or `NULL` for the local machine
274d0c080abSJoseph Pusztay . label    - the title to put in the title bar
27514d0ab18SJacob Faibussowitsch . x        - the x screen coordinates of the upper left coordinate of the window
27614d0ab18SJacob Faibussowitsch . y        - the y screen coordinates of the upper left coordinate of the window
27714d0ab18SJacob Faibussowitsch . m        - the screen width in pixels
27814d0ab18SJacob Faibussowitsch . n        - the screen height in pixels
279d0c080abSJoseph Pusztay - howoften - if positive then determines the frequency of the plotting, if -1 then only at the final time
280d0c080abSJoseph Pusztay 
281d0c080abSJoseph Pusztay   Output Parameter:
282d0c080abSJoseph Pusztay . ctx - the context
283d0c080abSJoseph Pusztay 
284bcf0153eSBarry Smith   Options Database Keys:
285d0c080abSJoseph Pusztay + -ts_monitor_lg_timestep        - automatically sets line graph monitor
286b43aa488SJacob Faibussowitsch . -ts_monitor_lg_timestep_log    - automatically sets line graph monitor
287bcf0153eSBarry Smith . -ts_monitor_lg_solution        - monitor the solution (or certain values of the solution by calling `TSMonitorLGSetDisplayVariables()` or `TSMonitorLGCtxSetDisplayVariables()`)
288d0c080abSJoseph Pusztay . -ts_monitor_lg_error           - monitor the error
289bcf0153eSBarry Smith . -ts_monitor_lg_ksp_iterations  - monitor the number of `KSP` iterations needed for each timestep
290bcf0153eSBarry Smith . -ts_monitor_lg_snes_iterations - monitor the number of `SNES` iterations needed for each timestep
291d0c080abSJoseph Pusztay - -lg_use_markers <true,false>   - mark the data points (at each time step) on the plot; default is true
292d0c080abSJoseph Pusztay 
293d0c080abSJoseph Pusztay   Level: intermediate
294d0c080abSJoseph Pusztay 
295bcf0153eSBarry Smith   Notes:
296bcf0153eSBarry Smith   Pass the context and `TSMonitorLGCtxDestroy()` to `TSMonitorSet()` to have the context destroyed when no longer needed.
297bcf0153eSBarry Smith 
298bcf0153eSBarry Smith   One can provide a function that transforms the solution before plotting it with `TSMonitorLGCtxSetTransform()` or `TSMonitorLGSetTransform()`
299bcf0153eSBarry Smith 
3001d27aa22SBarry Smith   Many of the functions that control the monitoring have two forms\: TSMonitorLGSet/GetXXXX() and TSMonitorLGCtxSet/GetXXXX() the first take a `TS` object as the
301bcf0153eSBarry Smith   first argument (if that `TS` object does not have a `TSMonitorLGCtx` associated with it the function call is ignored) and the second takes a `TSMonitorLGCtx` object
302bcf0153eSBarry Smith   as the first argument.
303bcf0153eSBarry Smith 
304bcf0153eSBarry Smith   One can control the names displayed for each solution or error variable with `TSMonitorLGCtxSetVariableNames()` or `TSMonitorLGSetVariableNames()`
305bcf0153eSBarry Smith 
3061cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorDefault()`, `VecView()`,
30742747ad1SJacob Faibussowitsch           `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`,
308db781477SPatrick Sanan           `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`,
309b43aa488SJacob Faibussowitsch           `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`,
310db781477SPatrick Sanan           `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()`
311d0c080abSJoseph Pusztay @*/
312d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorLGCtx *ctx)
313d71ae5a4SJacob Faibussowitsch {
314d0c080abSJoseph Pusztay   PetscDraw draw;
315d0c080abSJoseph Pusztay 
316d0c080abSJoseph Pusztay   PetscFunctionBegin;
3179566063dSJacob Faibussowitsch   PetscCall(PetscNew(ctx));
3189566063dSJacob Faibussowitsch   PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw));
3199566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetFromOptions(draw));
3209566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGCreate(draw, 1, &(*ctx)->lg));
3219566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGSetFromOptions((*ctx)->lg));
3229566063dSJacob Faibussowitsch   PetscCall(PetscDrawDestroy(&draw));
323d0c080abSJoseph Pusztay   (*ctx)->howoften = howoften;
3243ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
325d0c080abSJoseph Pusztay }
326d0c080abSJoseph Pusztay 
327a54bb2a9SBarry Smith /*@C
328a54bb2a9SBarry Smith   TSMonitorLGTimeStep - Monitors a `TS` by printing the time-steps
329a54bb2a9SBarry Smith 
330a54bb2a9SBarry Smith   Collective
331a54bb2a9SBarry Smith 
332a54bb2a9SBarry Smith   Input Parameters:
333a54bb2a9SBarry Smith + ts     - the time integrator
334a54bb2a9SBarry Smith . step   - the current time step
335a54bb2a9SBarry Smith . ptime  - the current time
336a54bb2a9SBarry Smith . v      - the current state
337a54bb2a9SBarry Smith - monctx - the monitor context obtained with `TSMonitorLGCtxCreate()`
338a54bb2a9SBarry Smith 
339a54bb2a9SBarry Smith   Level: advanced
340a54bb2a9SBarry Smith 
341a54bb2a9SBarry Smith   Note:
342a54bb2a9SBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()` along the `ctx` created by `TSMonitorLGCtxCreate()`
343a54bb2a9SBarry Smith   and `TSMonitorLGCtxDestroy()`
344a54bb2a9SBarry Smith 
345a54bb2a9SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGCtxDestroy()`
346a54bb2a9SBarry Smith @*/
347d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGTimeStep(TS ts, PetscInt step, PetscReal ptime, Vec v, void *monctx)
348d71ae5a4SJacob Faibussowitsch {
349d0c080abSJoseph Pusztay   TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx;
350d0c080abSJoseph Pusztay   PetscReal      x   = ptime, y;
351d0c080abSJoseph Pusztay 
352d0c080abSJoseph Pusztay   PetscFunctionBegin;
3533ba16761SJacob Faibussowitsch   if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates an interpolated solution */
354d0c080abSJoseph Pusztay   if (!step) {
355d0c080abSJoseph Pusztay     PetscDrawAxis axis;
356d0c080abSJoseph Pusztay     const char   *ylabel = ctx->semilogy ? "Log Time Step" : "Time Step";
3579566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis));
3589566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetLabels(axis, "Timestep as function of time", "Time", ylabel));
3599566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGReset(ctx->lg));
360d0c080abSJoseph Pusztay   }
3619566063dSJacob Faibussowitsch   PetscCall(TSGetTimeStep(ts, &y));
362d0c080abSJoseph Pusztay   if (ctx->semilogy) y = PetscLog10Real(y);
3639566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y));
364d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) {
3659566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(ctx->lg));
3669566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(ctx->lg));
367d0c080abSJoseph Pusztay   }
3683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
369d0c080abSJoseph Pusztay }
370d0c080abSJoseph Pusztay 
371d0c080abSJoseph Pusztay /*@C
372195e9b02SBarry Smith   TSMonitorLGCtxDestroy - Destroys a line graph context that was created with `TSMonitorLGCtxCreate()`.
373d0c080abSJoseph Pusztay 
374c3339decSBarry Smith   Collective
375d0c080abSJoseph Pusztay 
376d0c080abSJoseph Pusztay   Input Parameter:
377d0c080abSJoseph Pusztay . ctx - the monitor context
378d0c080abSJoseph Pusztay 
379d0c080abSJoseph Pusztay   Level: intermediate
380d0c080abSJoseph Pusztay 
381bcf0153eSBarry Smith   Note:
382bcf0153eSBarry Smith   Pass to `TSMonitorSet()` along with the context and `TSMonitorLGTimeStep()`
383bcf0153eSBarry Smith 
384a54bb2a9SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep()`
385d0c080abSJoseph Pusztay @*/
386d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxDestroy(TSMonitorLGCtx *ctx)
387d71ae5a4SJacob Faibussowitsch {
388d0c080abSJoseph Pusztay   PetscFunctionBegin;
38948a46eb9SPierre Jolivet   if ((*ctx)->transformdestroy) PetscCall(((*ctx)->transformdestroy)((*ctx)->transformctx));
3909566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGDestroy(&(*ctx)->lg));
3919566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayDestroy(&(*ctx)->names));
3929566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayDestroy(&(*ctx)->displaynames));
3939566063dSJacob Faibussowitsch   PetscCall(PetscFree((*ctx)->displayvariables));
3949566063dSJacob Faibussowitsch   PetscCall(PetscFree((*ctx)->displayvalues));
3959566063dSJacob Faibussowitsch   PetscCall(PetscFree(*ctx));
3963ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
397d0c080abSJoseph Pusztay }
398d0c080abSJoseph Pusztay 
399d7462660SMatthew Knepley /* Creates a TSMonitorSPCtx for use with DMSwarm particle visualizations */
40060e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorSPCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, PetscInt retain, PetscBool phase, PetscBool multispecies, TSMonitorSPCtx *ctx)
401d71ae5a4SJacob Faibussowitsch {
402d0c080abSJoseph Pusztay   PetscDraw draw;
403d0c080abSJoseph Pusztay 
404d0c080abSJoseph Pusztay   PetscFunctionBegin;
4059566063dSJacob Faibussowitsch   PetscCall(PetscNew(ctx));
4069566063dSJacob Faibussowitsch   PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw));
4079566063dSJacob Faibussowitsch   PetscCall(PetscDrawSetFromOptions(draw));
4089566063dSJacob Faibussowitsch   PetscCall(PetscDrawSPCreate(draw, 1, &(*ctx)->sp));
4099566063dSJacob Faibussowitsch   PetscCall(PetscDrawDestroy(&draw));
410d0c080abSJoseph Pusztay   (*ctx)->howoften     = howoften;
411d7462660SMatthew Knepley   (*ctx)->retain       = retain;
412d7462660SMatthew Knepley   (*ctx)->phase        = phase;
41360e16b1bSMatthew G. Knepley   (*ctx)->multispecies = multispecies;
4143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
415d0c080abSJoseph Pusztay }
416d0c080abSJoseph Pusztay 
41760e16b1bSMatthew G. Knepley /* Destroys a TSMonitorSPCtx that was created with TSMonitorSPCtxCreate */
418d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPCtxDestroy(TSMonitorSPCtx *ctx)
419d71ae5a4SJacob Faibussowitsch {
420d0c080abSJoseph Pusztay   PetscFunctionBegin;
4219566063dSJacob Faibussowitsch   PetscCall(PetscDrawSPDestroy(&(*ctx)->sp));
4229566063dSJacob Faibussowitsch   PetscCall(PetscFree(*ctx));
42360e16b1bSMatthew G. Knepley   PetscFunctionReturn(PETSC_SUCCESS);
42460e16b1bSMatthew G. Knepley }
425d0c080abSJoseph Pusztay 
42660e16b1bSMatthew G. Knepley /* Creates a TSMonitorHGCtx for use with DMSwarm particle visualizations */
42760e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, PetscInt Ns, PetscInt Nb, PetscBool velocity, TSMonitorHGCtx *ctx)
42860e16b1bSMatthew G. Knepley {
42960e16b1bSMatthew G. Knepley   PetscDraw draw;
43060e16b1bSMatthew G. Knepley   PetscInt  s;
43160e16b1bSMatthew G. Knepley 
43260e16b1bSMatthew G. Knepley   PetscFunctionBegin;
43360e16b1bSMatthew G. Knepley   PetscCall(PetscNew(ctx));
43460e16b1bSMatthew G. Knepley   PetscCall(PetscMalloc1(Ns, &(*ctx)->hg));
43560e16b1bSMatthew G. Knepley   for (s = 0; s < Ns; ++s) {
43660e16b1bSMatthew G. Knepley     PetscCall(PetscDrawCreate(comm, host, label, x + s * m, y, m, n, &draw));
43760e16b1bSMatthew G. Knepley     PetscCall(PetscDrawSetFromOptions(draw));
43860e16b1bSMatthew G. Knepley     PetscCall(PetscDrawHGCreate(draw, Nb, &(*ctx)->hg[s]));
43960e16b1bSMatthew G. Knepley     PetscCall(PetscDrawHGCalcStats((*ctx)->hg[s], PETSC_TRUE));
44060e16b1bSMatthew G. Knepley     PetscCall(PetscDrawDestroy(&draw));
44160e16b1bSMatthew G. Knepley   }
44260e16b1bSMatthew G. Knepley   (*ctx)->howoften = howoften;
44360e16b1bSMatthew G. Knepley   (*ctx)->Ns       = Ns;
44460e16b1bSMatthew G. Knepley   (*ctx)->velocity = velocity;
44560e16b1bSMatthew G. Knepley   PetscFunctionReturn(PETSC_SUCCESS);
44660e16b1bSMatthew G. Knepley }
44760e16b1bSMatthew G. Knepley 
44860e16b1bSMatthew G. Knepley /* Destroys a TSMonitorHGCtx that was created with TSMonitorHGCtxCreate */
44960e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGCtxDestroy(TSMonitorHGCtx *ctx)
45060e16b1bSMatthew G. Knepley {
45160e16b1bSMatthew G. Knepley   PetscInt s;
45260e16b1bSMatthew G. Knepley 
45360e16b1bSMatthew G. Knepley   PetscFunctionBegin;
45460e16b1bSMatthew G. Knepley   for (s = 0; s < (*ctx)->Ns; ++s) PetscCall(PetscDrawHGDestroy(&(*ctx)->hg[s]));
45560e16b1bSMatthew G. Knepley   PetscCall(PetscFree((*ctx)->hg));
45660e16b1bSMatthew G. Knepley   PetscCall(PetscFree(*ctx));
4573ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
458d0c080abSJoseph Pusztay }
459d0c080abSJoseph Pusztay 
460d0c080abSJoseph Pusztay /*@C
461bcf0153eSBarry Smith   TSMonitorDrawSolution - Monitors progress of the `TS` solvers by calling
462bcf0153eSBarry Smith   `VecView()` for the solution at each timestep
463d0c080abSJoseph Pusztay 
464c3339decSBarry Smith   Collective
465d0c080abSJoseph Pusztay 
466d0c080abSJoseph Pusztay   Input Parameters:
467bcf0153eSBarry Smith + ts    - the `TS` context
468d0c080abSJoseph Pusztay . step  - current time-step
469d0c080abSJoseph Pusztay . ptime - current time
47014d0ab18SJacob Faibussowitsch . u     - the solution at the current time
471195e9b02SBarry Smith - dummy - either a viewer or `NULL`
472d0c080abSJoseph Pusztay 
473bcf0153eSBarry Smith   Options Database Keys:
474bcf0153eSBarry Smith + -ts_monitor_draw_solution         - draw the solution at each time-step
475bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution
476bcf0153eSBarry Smith 
477bcf0153eSBarry Smith   Level: intermediate
478d0c080abSJoseph Pusztay 
479d0c080abSJoseph Pusztay   Notes:
480195e9b02SBarry Smith   The initial solution and current solution are not displayed with a common axis scaling so generally the option `-ts_monitor_draw_solution_initial`
481d0c080abSJoseph Pusztay   will look bad
482d0c080abSJoseph Pusztay 
483bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, as well as the context created with
484bcf0153eSBarry Smith   `TSMonitorDrawCtxCreate()` and the function `TSMonitorDrawCtxDestroy()` to cause the monitor to be used during the `TS` integration.
4853a61192cSBarry Smith 
4861cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtxCreate()`, `TSMonitorDrawCtxDestroy()`
487d0c080abSJoseph Pusztay @*/
488d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy)
489d71ae5a4SJacob Faibussowitsch {
490d0c080abSJoseph Pusztay   TSMonitorDrawCtx ictx = (TSMonitorDrawCtx)dummy;
491d0c080abSJoseph Pusztay   PetscDraw        draw;
492d0c080abSJoseph Pusztay 
493d0c080abSJoseph Pusztay   PetscFunctionBegin;
494d0c080abSJoseph Pusztay   if (!step && ictx->showinitial) {
49548a46eb9SPierre Jolivet     if (!ictx->initialsolution) PetscCall(VecDuplicate(u, &ictx->initialsolution));
4969566063dSJacob Faibussowitsch     PetscCall(VecCopy(u, ictx->initialsolution));
497d0c080abSJoseph Pusztay   }
4983ba16761SJacob Faibussowitsch   if (!(((ictx->howoften > 0) && (!(step % ictx->howoften))) || ((ictx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS);
499d0c080abSJoseph Pusztay 
500d0c080abSJoseph Pusztay   if (ictx->showinitial) {
501d0c080abSJoseph Pusztay     PetscReal pause;
5029566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetPause(ictx->viewer, &pause));
5039566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawSetPause(ictx->viewer, 0.0));
5049566063dSJacob Faibussowitsch     PetscCall(VecView(ictx->initialsolution, ictx->viewer));
5059566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawSetPause(ictx->viewer, pause));
5069566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_TRUE));
507d0c080abSJoseph Pusztay   }
5089566063dSJacob Faibussowitsch   PetscCall(VecView(u, ictx->viewer));
509d0c080abSJoseph Pusztay   if (ictx->showtimestepandtime) {
510d0c080abSJoseph Pusztay     PetscReal xl, yl, xr, yr, h;
511d0c080abSJoseph Pusztay     char      time[32];
512d0c080abSJoseph Pusztay 
5139566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw));
5149566063dSJacob Faibussowitsch     PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime));
5159566063dSJacob Faibussowitsch     PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr));
516d0c080abSJoseph Pusztay     h = yl + .95 * (yr - yl);
5179566063dSJacob Faibussowitsch     PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time));
5189566063dSJacob Faibussowitsch     PetscCall(PetscDrawFlush(draw));
519d0c080abSJoseph Pusztay   }
520d0c080abSJoseph Pusztay 
5211baa6e33SBarry Smith   if (ictx->showinitial) PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_FALSE));
5223ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
523d0c080abSJoseph Pusztay }
524d0c080abSJoseph Pusztay 
525d0c080abSJoseph Pusztay /*@C
526bcf0153eSBarry Smith   TSMonitorDrawSolutionPhase - Monitors progress of the `TS` solvers by plotting the solution as a phase diagram
527d0c080abSJoseph Pusztay 
528c3339decSBarry Smith   Collective
529d0c080abSJoseph Pusztay 
530d0c080abSJoseph Pusztay   Input Parameters:
531bcf0153eSBarry Smith + ts    - the `TS` context
532d0c080abSJoseph Pusztay . step  - current time-step
533d0c080abSJoseph Pusztay . ptime - current time
53414d0ab18SJacob Faibussowitsch . u     - the solution at the current time
535195e9b02SBarry Smith - dummy - either a viewer or `NULL`
536d0c080abSJoseph Pusztay 
537d0c080abSJoseph Pusztay   Level: intermediate
538d0c080abSJoseph Pusztay 
539bcf0153eSBarry Smith   Notes:
540bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
541bcf0153eSBarry Smith   to be used during the `TS` integration.
542bcf0153eSBarry Smith 
5431cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`
544d0c080abSJoseph Pusztay @*/
545d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionPhase(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy)
546d71ae5a4SJacob Faibussowitsch {
547d0c080abSJoseph Pusztay   TSMonitorDrawCtx   ictx = (TSMonitorDrawCtx)dummy;
548d0c080abSJoseph Pusztay   PetscDraw          draw;
549d0c080abSJoseph Pusztay   PetscDrawAxis      axis;
550d0c080abSJoseph Pusztay   PetscInt           n;
551d0c080abSJoseph Pusztay   PetscMPIInt        size;
552d0c080abSJoseph Pusztay   PetscReal          U0, U1, xl, yl, xr, yr, h;
553d0c080abSJoseph Pusztay   char               time[32];
554d0c080abSJoseph Pusztay   const PetscScalar *U;
555d0c080abSJoseph Pusztay 
556d0c080abSJoseph Pusztay   PetscFunctionBegin;
5579566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)ts), &size));
5583c633725SBarry Smith   PetscCheck(size == 1, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only allowed for sequential runs");
5599566063dSJacob Faibussowitsch   PetscCall(VecGetSize(u, &n));
5603c633725SBarry Smith   PetscCheck(n == 2, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only for ODEs with two unknowns");
561d0c080abSJoseph Pusztay 
5629566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw));
5639566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawGetDrawAxis(ictx->viewer, 0, &axis));
5649566063dSJacob Faibussowitsch   PetscCall(PetscDrawAxisGetLimits(axis, &xl, &xr, &yl, &yr));
565d0c080abSJoseph Pusztay   if (!step) {
5669566063dSJacob Faibussowitsch     PetscCall(PetscDrawClear(draw));
5679566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisDraw(axis));
568d0c080abSJoseph Pusztay   }
569d0c080abSJoseph Pusztay 
5709566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(u, &U));
571d0c080abSJoseph Pusztay   U0 = PetscRealPart(U[0]);
572d0c080abSJoseph Pusztay   U1 = PetscRealPart(U[1]);
5739566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(u, &U));
5743ba16761SJacob Faibussowitsch   if ((U0 < xl) || (U1 < yl) || (U0 > xr) || (U1 > yr)) PetscFunctionReturn(PETSC_SUCCESS);
575d0c080abSJoseph Pusztay 
576d0609cedSBarry Smith   PetscDrawCollectiveBegin(draw);
5779566063dSJacob Faibussowitsch   PetscCall(PetscDrawPoint(draw, U0, U1, PETSC_DRAW_BLACK));
578d0c080abSJoseph Pusztay   if (ictx->showtimestepandtime) {
5799566063dSJacob Faibussowitsch     PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr));
5809566063dSJacob Faibussowitsch     PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime));
581d0c080abSJoseph Pusztay     h = yl + .95 * (yr - yl);
5829566063dSJacob Faibussowitsch     PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time));
583d0c080abSJoseph Pusztay   }
584d0609cedSBarry Smith   PetscDrawCollectiveEnd(draw);
5859566063dSJacob Faibussowitsch   PetscCall(PetscDrawFlush(draw));
5869566063dSJacob Faibussowitsch   PetscCall(PetscDrawPause(draw));
5879566063dSJacob Faibussowitsch   PetscCall(PetscDrawSave(draw));
5883ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
589d0c080abSJoseph Pusztay }
590d0c080abSJoseph Pusztay 
591d0c080abSJoseph Pusztay /*@C
592bcf0153eSBarry Smith   TSMonitorDrawCtxDestroy - Destroys the monitor context for `TSMonitorDrawSolution()`
593d0c080abSJoseph Pusztay 
594c3339decSBarry Smith   Collective
595d0c080abSJoseph Pusztay 
5962fe279fdSBarry Smith   Input Parameter:
597b43aa488SJacob Faibussowitsch . ictx - the monitor context
598d0c080abSJoseph Pusztay 
599d0c080abSJoseph Pusztay   Level: intermediate
600d0c080abSJoseph Pusztay 
6011cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawSolution()`, `TSMonitorDrawError()`, `TSMonitorDrawCtx`
602d0c080abSJoseph Pusztay @*/
603d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxDestroy(TSMonitorDrawCtx *ictx)
604d71ae5a4SJacob Faibussowitsch {
605d0c080abSJoseph Pusztay   PetscFunctionBegin;
6069566063dSJacob Faibussowitsch   PetscCall(PetscViewerDestroy(&(*ictx)->viewer));
6079566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&(*ictx)->initialsolution));
6089566063dSJacob Faibussowitsch   PetscCall(PetscFree(*ictx));
6093ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
610d0c080abSJoseph Pusztay }
611d0c080abSJoseph Pusztay 
612d0c080abSJoseph Pusztay /*@C
613bcf0153eSBarry Smith   TSMonitorDrawCtxCreate - Creates the monitor context for `TSMonitorDrawCtx`
614d0c080abSJoseph Pusztay 
615c3339decSBarry Smith   Collective
616d0c080abSJoseph Pusztay 
61714d0ab18SJacob Faibussowitsch   Input Parameters:
61814d0ab18SJacob Faibussowitsch + comm     - the MPI communicator to use
61914d0ab18SJacob Faibussowitsch . host     - the X display to open, or `NULL` for the local machine
62014d0ab18SJacob Faibussowitsch . label    - the title to put in the title bar
62114d0ab18SJacob Faibussowitsch . x        - the x screen coordinates of the upper left coordinate of the window
62214d0ab18SJacob Faibussowitsch . y        - the y screen coordinates of the upper left coordinate of the window
62314d0ab18SJacob Faibussowitsch . m        - the screen width in pixels
62414d0ab18SJacob Faibussowitsch . n        - the screen height in pixels
62514d0ab18SJacob Faibussowitsch - howoften - if positive then determines the frequency of the plotting, if -1 then only at the final time
626d0c080abSJoseph Pusztay 
627d5b43468SJose E. Roman   Output Parameter:
628d0c080abSJoseph Pusztay . ctx - the monitor context
629d0c080abSJoseph Pusztay 
630bcf0153eSBarry Smith   Options Database Keys:
631bcf0153eSBarry Smith + -ts_monitor_draw_solution         - draw the solution at each time-step
632bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution
633d0c080abSJoseph Pusztay 
634d0c080abSJoseph Pusztay   Level: intermediate
635d0c080abSJoseph Pusztay 
636bcf0153eSBarry Smith   Note:
637bcf0153eSBarry Smith   The context created by this function, `PetscMonitorDrawSolution()`, and `TSMonitorDrawCtxDestroy()` should be passed together to `TSMonitorSet()`.
638bcf0153eSBarry Smith 
6391cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorDrawCtxDestroy()`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtx`, `PetscMonitorDrawSolution()`
640d0c080abSJoseph Pusztay @*/
641d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorDrawCtx *ctx)
642d71ae5a4SJacob Faibussowitsch {
643d0c080abSJoseph Pusztay   PetscFunctionBegin;
6449566063dSJacob Faibussowitsch   PetscCall(PetscNew(ctx));
6459566063dSJacob Faibussowitsch   PetscCall(PetscViewerDrawOpen(comm, host, label, x, y, m, n, &(*ctx)->viewer));
6469566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetFromOptions((*ctx)->viewer));
647d0c080abSJoseph Pusztay 
648d0c080abSJoseph Pusztay   (*ctx)->howoften    = howoften;
649d0c080abSJoseph Pusztay   (*ctx)->showinitial = PETSC_FALSE;
6509566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_initial", &(*ctx)->showinitial, NULL));
651d0c080abSJoseph Pusztay 
652d0c080abSJoseph Pusztay   (*ctx)->showtimestepandtime = PETSC_FALSE;
6539566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_show_time", &(*ctx)->showtimestepandtime, NULL));
6543ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
655d0c080abSJoseph Pusztay }
656d0c080abSJoseph Pusztay 
657d0c080abSJoseph Pusztay /*@C
658bcf0153eSBarry Smith   TSMonitorDrawSolutionFunction - Monitors progress of the `TS` solvers by calling
659bcf0153eSBarry Smith   `VecView()` for the solution provided by `TSSetSolutionFunction()` at each timestep
660d0c080abSJoseph Pusztay 
661c3339decSBarry Smith   Collective
662d0c080abSJoseph Pusztay 
663d0c080abSJoseph Pusztay   Input Parameters:
664bcf0153eSBarry Smith + ts    - the `TS` context
665d0c080abSJoseph Pusztay . step  - current time-step
666d0c080abSJoseph Pusztay . ptime - current time
66714d0ab18SJacob Faibussowitsch . u     - solution at current time
668195e9b02SBarry Smith - dummy - either a viewer or `NULL`
669d0c080abSJoseph Pusztay 
670bcf0153eSBarry Smith   Options Database Key:
671bcf0153eSBarry Smith . -ts_monitor_draw_solution_function - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()`
6723a61192cSBarry Smith 
673d0c080abSJoseph Pusztay   Level: intermediate
674d0c080abSJoseph Pusztay 
675bcf0153eSBarry Smith   Note:
676bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
677bcf0153eSBarry Smith   to be used during the `TS` integration.
678bcf0153eSBarry Smith 
6791cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()`
680d0c080abSJoseph Pusztay @*/
681d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionFunction(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy)
682d71ae5a4SJacob Faibussowitsch {
683d0c080abSJoseph Pusztay   TSMonitorDrawCtx ctx    = (TSMonitorDrawCtx)dummy;
684d0c080abSJoseph Pusztay   PetscViewer      viewer = ctx->viewer;
685d0c080abSJoseph Pusztay   Vec              work;
686d0c080abSJoseph Pusztay 
687d0c080abSJoseph Pusztay   PetscFunctionBegin;
6883ba16761SJacob Faibussowitsch   if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS);
6899566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &work));
6909566063dSJacob Faibussowitsch   PetscCall(TSComputeSolutionFunction(ts, ptime, work));
6919566063dSJacob Faibussowitsch   PetscCall(VecView(work, viewer));
6929566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&work));
6933ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
694d0c080abSJoseph Pusztay }
695d0c080abSJoseph Pusztay 
696d0c080abSJoseph Pusztay /*@C
697bcf0153eSBarry Smith   TSMonitorDrawError - Monitors progress of the `TS` solvers by calling
698bcf0153eSBarry Smith   `VecView()` for the error at each timestep
699d0c080abSJoseph Pusztay 
700c3339decSBarry Smith   Collective
701d0c080abSJoseph Pusztay 
702d0c080abSJoseph Pusztay   Input Parameters:
703bcf0153eSBarry Smith + ts    - the `TS` context
704d0c080abSJoseph Pusztay . step  - current time-step
705d0c080abSJoseph Pusztay . ptime - current time
70614d0ab18SJacob Faibussowitsch . u     - solution at current time
707195e9b02SBarry Smith - dummy - either a viewer or `NULL`
708d0c080abSJoseph Pusztay 
709bcf0153eSBarry Smith   Options Database Key:
710bcf0153eSBarry Smith . -ts_monitor_draw_error - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()`
7113a61192cSBarry Smith 
712d0c080abSJoseph Pusztay   Level: intermediate
713d0c080abSJoseph Pusztay 
714bcf0153eSBarry Smith   Notes:
715bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
716bcf0153eSBarry Smith   to be used during the `TS` integration.
717bcf0153eSBarry Smith 
7181cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()`
719d0c080abSJoseph Pusztay @*/
720d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy)
721d71ae5a4SJacob Faibussowitsch {
722d0c080abSJoseph Pusztay   TSMonitorDrawCtx ctx    = (TSMonitorDrawCtx)dummy;
723d0c080abSJoseph Pusztay   PetscViewer      viewer = ctx->viewer;
724d0c080abSJoseph Pusztay   Vec              work;
725d0c080abSJoseph Pusztay 
726d0c080abSJoseph Pusztay   PetscFunctionBegin;
7273ba16761SJacob Faibussowitsch   if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(PETSC_SUCCESS);
7289566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &work));
7299566063dSJacob Faibussowitsch   PetscCall(TSComputeSolutionFunction(ts, ptime, work));
7309566063dSJacob Faibussowitsch   PetscCall(VecAXPY(work, -1.0, u));
7319566063dSJacob Faibussowitsch   PetscCall(VecView(work, viewer));
7329566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&work));
7333ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
734d0c080abSJoseph Pusztay }
735d0c080abSJoseph Pusztay 
736d0c080abSJoseph Pusztay /*@C
737195e9b02SBarry Smith   TSMonitorSolution - Monitors progress of the `TS` solvers by `VecView()` for the solution at each timestep. Normally the viewer is a binary file or a `PetscDraw` object
738d0c080abSJoseph Pusztay 
739c3339decSBarry Smith   Collective
740d0c080abSJoseph Pusztay 
741d0c080abSJoseph Pusztay   Input Parameters:
742bcf0153eSBarry Smith + ts    - the `TS` context
743d0c080abSJoseph Pusztay . step  - current time-step
744d0c080abSJoseph Pusztay . ptime - current time
745d0c080abSJoseph Pusztay . u     - current state
746d0c080abSJoseph Pusztay - vf    - viewer and its format
747d0c080abSJoseph Pusztay 
748d0c080abSJoseph Pusztay   Level: intermediate
749d0c080abSJoseph Pusztay 
750bcf0153eSBarry Smith   Notes:
751bcf0153eSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
752bcf0153eSBarry Smith   to be used during the `TS` integration.
753bcf0153eSBarry Smith 
7541cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`
755d0c080abSJoseph Pusztay @*/
756d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf)
757d71ae5a4SJacob Faibussowitsch {
758d0c080abSJoseph Pusztay   PetscFunctionBegin;
7593ba16761SJacob Faibussowitsch   if (vf->view_interval > 0 && !ts->reason && step % vf->view_interval != 0) PetscFunctionReturn(PETSC_SUCCESS);
7609566063dSJacob Faibussowitsch   PetscCall(PetscViewerPushFormat(vf->viewer, vf->format));
7619566063dSJacob Faibussowitsch   PetscCall(VecView(u, vf->viewer));
7629566063dSJacob Faibussowitsch   PetscCall(PetscViewerPopFormat(vf->viewer));
7633ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
764d0c080abSJoseph Pusztay }
765d0c080abSJoseph Pusztay 
766d0c080abSJoseph Pusztay /*@C
767bcf0153eSBarry Smith   TSMonitorSolutionVTK - Monitors progress of the `TS` solvers by `VecView()` for the solution at each timestep.
768d0c080abSJoseph Pusztay 
769c3339decSBarry Smith   Collective
770d0c080abSJoseph Pusztay 
771d0c080abSJoseph Pusztay   Input Parameters:
772bcf0153eSBarry Smith + ts               - the `TS` context
773d0c080abSJoseph Pusztay . step             - current time-step
774d0c080abSJoseph Pusztay . ptime            - current time
775d0c080abSJoseph Pusztay . u                - current state
77663a3b9bcSJacob Faibussowitsch - filenametemplate - string containing a format specifier for the integer time step (e.g. %03" PetscInt_FMT ")
777d0c080abSJoseph Pusztay 
778d0c080abSJoseph Pusztay   Level: intermediate
779d0c080abSJoseph Pusztay 
780d0c080abSJoseph Pusztay   Notes:
781d0c080abSJoseph Pusztay   The VTK format does not allow writing multiple time steps in the same file, therefore a different file will be written for each time step.
782d0c080abSJoseph Pusztay   These are named according to the file name template.
783d0c080abSJoseph Pusztay 
7843a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
785bcf0153eSBarry Smith   to be used during the `TS` integration.
786d0c080abSJoseph Pusztay 
7871cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`
788d0c080abSJoseph Pusztay @*/
789d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolutionVTK(TS ts, PetscInt step, PetscReal ptime, Vec u, void *filenametemplate)
790d71ae5a4SJacob Faibussowitsch {
791d0c080abSJoseph Pusztay   char        filename[PETSC_MAX_PATH_LEN];
792d0c080abSJoseph Pusztay   PetscViewer viewer;
793d0c080abSJoseph Pusztay 
794d0c080abSJoseph Pusztay   PetscFunctionBegin;
7953ba16761SJacob Faibussowitsch   if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
7969566063dSJacob Faibussowitsch   PetscCall(PetscSNPrintf(filename, sizeof(filename), (const char *)filenametemplate, step));
7979566063dSJacob Faibussowitsch   PetscCall(PetscViewerVTKOpen(PetscObjectComm((PetscObject)ts), filename, FILE_MODE_WRITE, &viewer));
7989566063dSJacob Faibussowitsch   PetscCall(VecView(u, viewer));
7999566063dSJacob Faibussowitsch   PetscCall(PetscViewerDestroy(&viewer));
8003ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
801d0c080abSJoseph Pusztay }
802d0c080abSJoseph Pusztay 
803d0c080abSJoseph Pusztay /*@C
804bcf0153eSBarry Smith   TSMonitorSolutionVTKDestroy - Destroy filename template string created for use with `TSMonitorSolutionVTK()`
805d0c080abSJoseph Pusztay 
806bcf0153eSBarry Smith   Not Collective
807d0c080abSJoseph Pusztay 
8082fe279fdSBarry Smith   Input Parameter:
80963a3b9bcSJacob Faibussowitsch . filenametemplate - string containing a format specifier for the integer time step (e.g. %03" PetscInt_FMT ")
810d0c080abSJoseph Pusztay 
811d0c080abSJoseph Pusztay   Level: intermediate
812d0c080abSJoseph Pusztay 
813d0c080abSJoseph Pusztay   Note:
814bcf0153eSBarry Smith   This function is normally passed to `TSMonitorSet()` along with `TSMonitorSolutionVTK()`.
815d0c080abSJoseph Pusztay 
8161cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorSolutionVTK()`
817d0c080abSJoseph Pusztay @*/
818d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolutionVTKDestroy(void *filenametemplate)
819d71ae5a4SJacob Faibussowitsch {
820d0c080abSJoseph Pusztay   PetscFunctionBegin;
8219566063dSJacob Faibussowitsch   PetscCall(PetscFree(*(char **)filenametemplate));
8223ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
823d0c080abSJoseph Pusztay }
824d0c080abSJoseph Pusztay 
825d0c080abSJoseph Pusztay /*@C
826bcf0153eSBarry Smith   TSMonitorLGSolution - Monitors progress of the `TS` solvers by plotting each component of the solution vector
827d0c080abSJoseph Pusztay   in a time based line graph
828d0c080abSJoseph Pusztay 
829c3339decSBarry Smith   Collective
830d0c080abSJoseph Pusztay 
831d0c080abSJoseph Pusztay   Input Parameters:
832bcf0153eSBarry Smith + ts    - the `TS` context
833d0c080abSJoseph Pusztay . step  - current time-step
834d0c080abSJoseph Pusztay . ptime - current time
835d0c080abSJoseph Pusztay . u     - current solution
836bcf0153eSBarry Smith - dctx  - the `TSMonitorLGCtx` object that contains all the options for the monitoring, this is created with `TSMonitorLGCtxCreate()`
837d0c080abSJoseph Pusztay 
838bcf0153eSBarry Smith   Options Database Key:
83967b8a455SSatish Balay . -ts_monitor_lg_solution_variables - enable monitor of lg solution variables
840d0c080abSJoseph Pusztay 
841d0c080abSJoseph Pusztay   Level: intermediate
842d0c080abSJoseph Pusztay 
843d0c080abSJoseph Pusztay   Notes:
844d0c080abSJoseph Pusztay   Each process in a parallel run displays its component solutions in a separate window
845d0c080abSJoseph Pusztay 
8463a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
847bcf0153eSBarry Smith   to be used during the `TS` integration.
8483a61192cSBarry Smith 
8491cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGCtxCreate()`, `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`,
850db781477SPatrick Sanan           `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`,
851db781477SPatrick Sanan           `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGError()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`,
852db781477SPatrick Sanan           `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()`
853d0c080abSJoseph Pusztay @*/
854d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx)
855d71ae5a4SJacob Faibussowitsch {
856d0c080abSJoseph Pusztay   TSMonitorLGCtx     ctx = (TSMonitorLGCtx)dctx;
857d0c080abSJoseph Pusztay   const PetscScalar *yy;
858d0c080abSJoseph Pusztay   Vec                v;
859d0c080abSJoseph Pusztay 
860d0c080abSJoseph Pusztay   PetscFunctionBegin;
8613ba16761SJacob Faibussowitsch   if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
862d0c080abSJoseph Pusztay   if (!step) {
863d0c080abSJoseph Pusztay     PetscDrawAxis axis;
864d0c080abSJoseph Pusztay     PetscInt      dim;
8659566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis));
8669566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetLabels(axis, "Solution as function of time", "Time", "Solution"));
867d0c080abSJoseph Pusztay     if (!ctx->names) {
868d0c080abSJoseph Pusztay       PetscBool flg;
869d0c080abSJoseph Pusztay       /* user provides names of variables to plot but no names has been set so assume names are integer values */
8709566063dSJacob Faibussowitsch       PetscCall(PetscOptionsHasName(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", &flg));
871d0c080abSJoseph Pusztay       if (flg) {
872d0c080abSJoseph Pusztay         PetscInt i, n;
873d0c080abSJoseph Pusztay         char   **names;
8749566063dSJacob Faibussowitsch         PetscCall(VecGetSize(u, &n));
8759566063dSJacob Faibussowitsch         PetscCall(PetscMalloc1(n + 1, &names));
876d0c080abSJoseph Pusztay         for (i = 0; i < n; i++) {
8779566063dSJacob Faibussowitsch           PetscCall(PetscMalloc1(5, &names[i]));
87863a3b9bcSJacob Faibussowitsch           PetscCall(PetscSNPrintf(names[i], 5, "%" PetscInt_FMT, i));
879d0c080abSJoseph Pusztay         }
880d0c080abSJoseph Pusztay         names[n]   = NULL;
881d0c080abSJoseph Pusztay         ctx->names = names;
882d0c080abSJoseph Pusztay       }
883d0c080abSJoseph Pusztay     }
884d0c080abSJoseph Pusztay     if (ctx->names && !ctx->displaynames) {
885d0c080abSJoseph Pusztay       char    **displaynames;
886d0c080abSJoseph Pusztay       PetscBool flg;
8879566063dSJacob Faibussowitsch       PetscCall(VecGetLocalSize(u, &dim));
8889566063dSJacob Faibussowitsch       PetscCall(PetscCalloc1(dim + 1, &displaynames));
8899566063dSJacob Faibussowitsch       PetscCall(PetscOptionsGetStringArray(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", displaynames, &dim, &flg));
8901baa6e33SBarry Smith       if (flg) PetscCall(TSMonitorLGCtxSetDisplayVariables(ctx, (const char *const *)displaynames));
8919566063dSJacob Faibussowitsch       PetscCall(PetscStrArrayDestroy(&displaynames));
892d0c080abSJoseph Pusztay     }
893d0c080abSJoseph Pusztay     if (ctx->displaynames) {
8949566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGSetDimension(ctx->lg, ctx->ndisplayvariables));
8959566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->displaynames));
896d0c080abSJoseph Pusztay     } else if (ctx->names) {
8979566063dSJacob Faibussowitsch       PetscCall(VecGetLocalSize(u, &dim));
8989566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGSetDimension(ctx->lg, dim));
8999566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->names));
900d0c080abSJoseph Pusztay     } else {
9019566063dSJacob Faibussowitsch       PetscCall(VecGetLocalSize(u, &dim));
9029566063dSJacob Faibussowitsch       PetscCall(PetscDrawLGSetDimension(ctx->lg, dim));
903d0c080abSJoseph Pusztay     }
9049566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGReset(ctx->lg));
905d0c080abSJoseph Pusztay   }
906d0c080abSJoseph Pusztay 
907d0c080abSJoseph Pusztay   if (!ctx->transform) v = u;
9089566063dSJacob Faibussowitsch   else PetscCall((*ctx->transform)(ctx->transformctx, u, &v));
9099566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(v, &yy));
910d0c080abSJoseph Pusztay   if (ctx->displaynames) {
911d0c080abSJoseph Pusztay     PetscInt i;
9129371c9d4SSatish Balay     for (i = 0; i < ctx->ndisplayvariables; i++) ctx->displayvalues[i] = PetscRealPart(yy[ctx->displayvariables[i]]);
9139566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, ctx->displayvalues));
914d0c080abSJoseph Pusztay   } else {
915d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX)
916d0c080abSJoseph Pusztay     PetscInt   i, n;
917d0c080abSJoseph Pusztay     PetscReal *yreal;
9189566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(v, &n));
9199566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(n, &yreal));
920d0c080abSJoseph Pusztay     for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]);
9219566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal));
9229566063dSJacob Faibussowitsch     PetscCall(PetscFree(yreal));
923d0c080abSJoseph Pusztay #else
9249566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy));
925d0c080abSJoseph Pusztay #endif
926d0c080abSJoseph Pusztay   }
9279566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(v, &yy));
9289566063dSJacob Faibussowitsch   if (ctx->transform) PetscCall(VecDestroy(&v));
929d0c080abSJoseph Pusztay 
930d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) {
9319566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(ctx->lg));
9329566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(ctx->lg));
933d0c080abSJoseph Pusztay   }
9343ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
935d0c080abSJoseph Pusztay }
936d0c080abSJoseph Pusztay 
937d0c080abSJoseph Pusztay /*@C
938d0c080abSJoseph Pusztay   TSMonitorLGSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot
939d0c080abSJoseph Pusztay 
940c3339decSBarry Smith   Collective
941d0c080abSJoseph Pusztay 
942d0c080abSJoseph Pusztay   Input Parameters:
943bcf0153eSBarry Smith + ts    - the `TS` context
944195e9b02SBarry Smith - names - the names of the components, final string must be `NULL`
945d0c080abSJoseph Pusztay 
946d0c080abSJoseph Pusztay   Level: intermediate
947d0c080abSJoseph Pusztay 
948d0c080abSJoseph Pusztay   Notes:
949bcf0153eSBarry Smith   If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored
950d0c080abSJoseph Pusztay 
9511cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetVariableNames()`
952d0c080abSJoseph Pusztay @*/
953d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetVariableNames(TS ts, const char *const *names)
954d71ae5a4SJacob Faibussowitsch {
955d0c080abSJoseph Pusztay   PetscInt i;
956d0c080abSJoseph Pusztay 
957d0c080abSJoseph Pusztay   PetscFunctionBegin;
958d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
959d0c080abSJoseph Pusztay     if (ts->monitor[i] == TSMonitorLGSolution) {
9609566063dSJacob Faibussowitsch       PetscCall(TSMonitorLGCtxSetVariableNames((TSMonitorLGCtx)ts->monitorcontext[i], names));
961d0c080abSJoseph Pusztay       break;
962d0c080abSJoseph Pusztay     }
963d0c080abSJoseph Pusztay   }
9643ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
965d0c080abSJoseph Pusztay }
966d0c080abSJoseph Pusztay 
967d0c080abSJoseph Pusztay /*@C
968d0c080abSJoseph Pusztay   TSMonitorLGCtxSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot
969d0c080abSJoseph Pusztay 
970c3339decSBarry Smith   Collective
971d0c080abSJoseph Pusztay 
972d0c080abSJoseph Pusztay   Input Parameters:
973b43aa488SJacob Faibussowitsch + ctx   - the `TS` context
974195e9b02SBarry Smith - names - the names of the components, final string must be `NULL`
975d0c080abSJoseph Pusztay 
976d0c080abSJoseph Pusztay   Level: intermediate
977d0c080abSJoseph Pusztay 
9781cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGSetVariableNames()`
979d0c080abSJoseph Pusztay @*/
980d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetVariableNames(TSMonitorLGCtx ctx, const char *const *names)
981d71ae5a4SJacob Faibussowitsch {
982d0c080abSJoseph Pusztay   PetscFunctionBegin;
9839566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayDestroy(&ctx->names));
9849566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayallocpy(names, &ctx->names));
9853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
986d0c080abSJoseph Pusztay }
987d0c080abSJoseph Pusztay 
988d0c080abSJoseph Pusztay /*@C
989d0c080abSJoseph Pusztay   TSMonitorLGGetVariableNames - Gets the name of each component in the solution vector so that it may be displayed in the plot
990d0c080abSJoseph Pusztay 
991c3339decSBarry Smith   Collective
992d0c080abSJoseph Pusztay 
993d0c080abSJoseph Pusztay   Input Parameter:
994bcf0153eSBarry Smith . ts - the `TS` context
995d0c080abSJoseph Pusztay 
996d0c080abSJoseph Pusztay   Output Parameter:
997195e9b02SBarry Smith . names - the names of the components, final string must be `NULL`
998d0c080abSJoseph Pusztay 
999d0c080abSJoseph Pusztay   Level: intermediate
1000d0c080abSJoseph Pusztay 
1001bcf0153eSBarry Smith   Note:
1002bcf0153eSBarry Smith   If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored
1003d0c080abSJoseph Pusztay 
10041cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`
1005d0c080abSJoseph Pusztay @*/
1006d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGGetVariableNames(TS ts, const char *const **names)
1007d71ae5a4SJacob Faibussowitsch {
1008d0c080abSJoseph Pusztay   PetscInt i;
1009d0c080abSJoseph Pusztay 
1010d0c080abSJoseph Pusztay   PetscFunctionBegin;
1011d0c080abSJoseph Pusztay   *names = NULL;
1012d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
1013d0c080abSJoseph Pusztay     if (ts->monitor[i] == TSMonitorLGSolution) {
1014d0c080abSJoseph Pusztay       TSMonitorLGCtx ctx = (TSMonitorLGCtx)ts->monitorcontext[i];
1015d0c080abSJoseph Pusztay       *names             = (const char *const *)ctx->names;
1016d0c080abSJoseph Pusztay       break;
1017d0c080abSJoseph Pusztay     }
1018d0c080abSJoseph Pusztay   }
10193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1020d0c080abSJoseph Pusztay }
1021d0c080abSJoseph Pusztay 
1022d0c080abSJoseph Pusztay /*@C
1023d0c080abSJoseph Pusztay   TSMonitorLGCtxSetDisplayVariables - Sets the variables that are to be display in the monitor
1024d0c080abSJoseph Pusztay 
1025c3339decSBarry Smith   Collective
1026d0c080abSJoseph Pusztay 
1027d0c080abSJoseph Pusztay   Input Parameters:
1028bcf0153eSBarry Smith + ctx          - the `TSMonitorLG` context
1029195e9b02SBarry Smith - displaynames - the names of the components, final string must be `NULL`
1030d0c080abSJoseph Pusztay 
1031d0c080abSJoseph Pusztay   Level: intermediate
1032d0c080abSJoseph Pusztay 
10331cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`
1034d0c080abSJoseph Pusztay @*/
1035d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetDisplayVariables(TSMonitorLGCtx ctx, const char *const *displaynames)
1036d71ae5a4SJacob Faibussowitsch {
1037d0c080abSJoseph Pusztay   PetscInt j = 0, k;
1038d0c080abSJoseph Pusztay 
1039d0c080abSJoseph Pusztay   PetscFunctionBegin;
10403ba16761SJacob Faibussowitsch   if (!ctx->names) PetscFunctionReturn(PETSC_SUCCESS);
10419566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayDestroy(&ctx->displaynames));
10429566063dSJacob Faibussowitsch   PetscCall(PetscStrArrayallocpy(displaynames, &ctx->displaynames));
1043d0c080abSJoseph Pusztay   while (displaynames[j]) j++;
1044d0c080abSJoseph Pusztay   ctx->ndisplayvariables = j;
10459566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvariables));
10469566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvalues));
1047d0c080abSJoseph Pusztay   j = 0;
1048d0c080abSJoseph Pusztay   while (displaynames[j]) {
1049d0c080abSJoseph Pusztay     k = 0;
1050d0c080abSJoseph Pusztay     while (ctx->names[k]) {
1051d0c080abSJoseph Pusztay       PetscBool flg;
10529566063dSJacob Faibussowitsch       PetscCall(PetscStrcmp(displaynames[j], ctx->names[k], &flg));
1053d0c080abSJoseph Pusztay       if (flg) {
1054d0c080abSJoseph Pusztay         ctx->displayvariables[j] = k;
1055d0c080abSJoseph Pusztay         break;
1056d0c080abSJoseph Pusztay       }
1057d0c080abSJoseph Pusztay       k++;
1058d0c080abSJoseph Pusztay     }
1059d0c080abSJoseph Pusztay     j++;
1060d0c080abSJoseph Pusztay   }
10613ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1062d0c080abSJoseph Pusztay }
1063d0c080abSJoseph Pusztay 
1064d0c080abSJoseph Pusztay /*@C
1065d0c080abSJoseph Pusztay   TSMonitorLGSetDisplayVariables - Sets the variables that are to be display in the monitor
1066d0c080abSJoseph Pusztay 
1067c3339decSBarry Smith   Collective
1068d0c080abSJoseph Pusztay 
1069d0c080abSJoseph Pusztay   Input Parameters:
1070bcf0153eSBarry Smith + ts           - the `TS` context
1071195e9b02SBarry Smith - displaynames - the names of the components, final string must be `NULL`
1072d0c080abSJoseph Pusztay 
1073d0c080abSJoseph Pusztay   Level: intermediate
1074d0c080abSJoseph Pusztay 
1075bcf0153eSBarry Smith   Note:
1076bcf0153eSBarry Smith   If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored
1077bcf0153eSBarry Smith 
10781cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`
1079d0c080abSJoseph Pusztay @*/
1080d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetDisplayVariables(TS ts, const char *const *displaynames)
1081d71ae5a4SJacob Faibussowitsch {
1082d0c080abSJoseph Pusztay   PetscInt i;
1083d0c080abSJoseph Pusztay 
1084d0c080abSJoseph Pusztay   PetscFunctionBegin;
1085d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
1086d0c080abSJoseph Pusztay     if (ts->monitor[i] == TSMonitorLGSolution) {
10879566063dSJacob Faibussowitsch       PetscCall(TSMonitorLGCtxSetDisplayVariables((TSMonitorLGCtx)ts->monitorcontext[i], displaynames));
1088d0c080abSJoseph Pusztay       break;
1089d0c080abSJoseph Pusztay     }
1090d0c080abSJoseph Pusztay   }
10913ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1092d0c080abSJoseph Pusztay }
1093d0c080abSJoseph Pusztay 
1094d0c080abSJoseph Pusztay /*@C
1095d0c080abSJoseph Pusztay   TSMonitorLGSetTransform - Solution vector will be transformed by provided function before being displayed
1096d0c080abSJoseph Pusztay 
1097c3339decSBarry Smith   Collective
1098d0c080abSJoseph Pusztay 
1099d0c080abSJoseph Pusztay   Input Parameters:
1100bcf0153eSBarry Smith + ts        - the `TS` context
1101d0c080abSJoseph Pusztay . transform - the transform function
1102d0c080abSJoseph Pusztay . destroy   - function to destroy the optional context
1103b43aa488SJacob Faibussowitsch - tctx      - optional context used by transform function
1104d0c080abSJoseph Pusztay 
1105d0c080abSJoseph Pusztay   Level: intermediate
1106d0c080abSJoseph Pusztay 
1107bcf0153eSBarry Smith   Note:
1108bcf0153eSBarry Smith   If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored
1109bcf0153eSBarry Smith 
11101cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGCtxSetTransform()`
1111d0c080abSJoseph Pusztay @*/
1112d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetTransform(TS ts, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscErrorCode (*destroy)(void *), void *tctx)
1113d71ae5a4SJacob Faibussowitsch {
1114d0c080abSJoseph Pusztay   PetscInt i;
1115d0c080abSJoseph Pusztay 
1116d0c080abSJoseph Pusztay   PetscFunctionBegin;
1117d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
111848a46eb9SPierre Jolivet     if (ts->monitor[i] == TSMonitorLGSolution) PetscCall(TSMonitorLGCtxSetTransform((TSMonitorLGCtx)ts->monitorcontext[i], transform, destroy, tctx));
1119d0c080abSJoseph Pusztay   }
11203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1121d0c080abSJoseph Pusztay }
1122d0c080abSJoseph Pusztay 
1123d0c080abSJoseph Pusztay /*@C
1124d0c080abSJoseph Pusztay   TSMonitorLGCtxSetTransform - Solution vector will be transformed by provided function before being displayed
1125d0c080abSJoseph Pusztay 
1126c3339decSBarry Smith   Collective
1127d0c080abSJoseph Pusztay 
1128d0c080abSJoseph Pusztay   Input Parameters:
1129b43aa488SJacob Faibussowitsch + tctx      - the `TS` context
1130d0c080abSJoseph Pusztay . transform - the transform function
1131d0c080abSJoseph Pusztay . destroy   - function to destroy the optional context
1132d0c080abSJoseph Pusztay - ctx       - optional context used by transform function
1133d0c080abSJoseph Pusztay 
1134d0c080abSJoseph Pusztay   Level: intermediate
1135d0c080abSJoseph Pusztay 
11361cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGSetTransform()`
1137d0c080abSJoseph Pusztay @*/
1138d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetTransform(TSMonitorLGCtx ctx, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscErrorCode (*destroy)(void *), void *tctx)
1139d71ae5a4SJacob Faibussowitsch {
1140d0c080abSJoseph Pusztay   PetscFunctionBegin;
1141d0c080abSJoseph Pusztay   ctx->transform        = transform;
1142d0c080abSJoseph Pusztay   ctx->transformdestroy = destroy;
1143d0c080abSJoseph Pusztay   ctx->transformctx     = tctx;
11443ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1145d0c080abSJoseph Pusztay }
1146d0c080abSJoseph Pusztay 
1147d0c080abSJoseph Pusztay /*@C
1148bcf0153eSBarry Smith   TSMonitorLGError - Monitors progress of the `TS` solvers by plotting each component of the error
1149d0c080abSJoseph Pusztay   in a time based line graph
1150d0c080abSJoseph Pusztay 
1151c3339decSBarry Smith   Collective
1152d0c080abSJoseph Pusztay 
1153d0c080abSJoseph Pusztay   Input Parameters:
1154bcf0153eSBarry Smith + ts    - the `TS` context
1155d0c080abSJoseph Pusztay . step  - current time-step
1156d0c080abSJoseph Pusztay . ptime - current time
1157d0c080abSJoseph Pusztay . u     - current solution
1158b43aa488SJacob Faibussowitsch - dummy - `TSMonitorLGCtx` object created with `TSMonitorLGCtxCreate()`
1159d0c080abSJoseph Pusztay 
1160bcf0153eSBarry Smith   Options Database Key:
11613a61192cSBarry Smith . -ts_monitor_lg_error - create a graphical monitor of error history
11623a61192cSBarry Smith 
1163d0c080abSJoseph Pusztay   Level: intermediate
1164d0c080abSJoseph Pusztay 
1165d0c080abSJoseph Pusztay   Notes:
1166d0c080abSJoseph Pusztay   Each process in a parallel run displays its component errors in a separate window
1167d0c080abSJoseph Pusztay 
1168bcf0153eSBarry Smith   The user must provide the solution using `TSSetSolutionFunction()` to use this monitor.
1169d0c080abSJoseph Pusztay 
11703a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
11713a61192cSBarry Smith   to be used during the TS integration.
1172d0c080abSJoseph Pusztay 
11731cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()`
1174d0c080abSJoseph Pusztay @*/
1175d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy)
1176d71ae5a4SJacob Faibussowitsch {
1177d0c080abSJoseph Pusztay   TSMonitorLGCtx     ctx = (TSMonitorLGCtx)dummy;
1178d0c080abSJoseph Pusztay   const PetscScalar *yy;
1179d0c080abSJoseph Pusztay   Vec                y;
1180d0c080abSJoseph Pusztay 
1181d0c080abSJoseph Pusztay   PetscFunctionBegin;
1182d0c080abSJoseph Pusztay   if (!step) {
1183d0c080abSJoseph Pusztay     PetscDrawAxis axis;
1184d0c080abSJoseph Pusztay     PetscInt      dim;
11859566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis));
11869566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetLabels(axis, "Error in solution as function of time", "Time", "Error"));
11879566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(u, &dim));
11889566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSetDimension(ctx->lg, dim));
11899566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGReset(ctx->lg));
1190d0c080abSJoseph Pusztay   }
11919566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(u, &y));
11929566063dSJacob Faibussowitsch   PetscCall(TSComputeSolutionFunction(ts, ptime, y));
11939566063dSJacob Faibussowitsch   PetscCall(VecAXPY(y, -1.0, u));
11949566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(y, &yy));
1195d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX)
1196d0c080abSJoseph Pusztay   {
1197d0c080abSJoseph Pusztay     PetscReal *yreal;
1198d0c080abSJoseph Pusztay     PetscInt   i, n;
11999566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(y, &n));
12009566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(n, &yreal));
1201d0c080abSJoseph Pusztay     for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]);
12029566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal));
12039566063dSJacob Faibussowitsch     PetscCall(PetscFree(yreal));
1204d0c080abSJoseph Pusztay   }
1205d0c080abSJoseph Pusztay #else
12069566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy));
1207d0c080abSJoseph Pusztay #endif
12089566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(y, &yy));
12099566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y));
1210d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) {
12119566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(ctx->lg));
12129566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(ctx->lg));
1213d0c080abSJoseph Pusztay   }
12143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1215d0c080abSJoseph Pusztay }
1216d0c080abSJoseph Pusztay 
1217d0c080abSJoseph Pusztay /*@C
1218bcf0153eSBarry Smith   TSMonitorSPSwarmSolution - Graphically displays phase plots of `DMSWARM` particles on a scatter plot
1219d0c080abSJoseph Pusztay 
1220d0c080abSJoseph Pusztay   Input Parameters:
1221bcf0153eSBarry Smith + ts    - the `TS` context
1222d0c080abSJoseph Pusztay . step  - current time-step
1223d0c080abSJoseph Pusztay . ptime - current time
1224d0c080abSJoseph Pusztay . u     - current solution
1225bcf0153eSBarry Smith - dctx  - the `TSMonitorSPCtx` object that contains all the options for the monitoring, this is created with `TSMonitorSPCtxCreate()`
1226d0c080abSJoseph Pusztay 
1227bcf0153eSBarry Smith   Options Database Keys:
1228d7462660SMatthew Knepley + -ts_monitor_sp_swarm <n>                  - Monitor the solution every n steps, or -1 for plotting only the final solution
1229d7462660SMatthew Knepley . -ts_monitor_sp_swarm_retain <n>           - Retain n old points so we can see the history, or -1 for all points
123020f4b53cSBarry Smith . -ts_monitor_sp_swarm_multi_species <bool> - Color each species differently
1231d7462660SMatthew Knepley - -ts_monitor_sp_swarm_phase <bool>         - Plot in phase space, as opposed to coordinate space
1232d0c080abSJoseph Pusztay 
1233d0c080abSJoseph Pusztay   Level: intermediate
1234d0c080abSJoseph Pusztay 
12353a61192cSBarry Smith   Notes:
12363a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
1237bcf0153eSBarry Smith   to be used during the `TS` integration.
12383a61192cSBarry Smith 
12391cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitoSet()`, `DMSWARM`, `TSMonitorSPCtxCreate()`
1240d0c080abSJoseph Pusztay @*/
1241d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPSwarmSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx)
1242d71ae5a4SJacob Faibussowitsch {
1243d0c080abSJoseph Pusztay   TSMonitorSPCtx     ctx = (TSMonitorSPCtx)dctx;
1244f98b2f00SMatthew G. Knepley   PetscDraw          draw;
1245d7462660SMatthew Knepley   DM                 dm, cdm;
1246d0c080abSJoseph Pusztay   const PetscScalar *yy;
124760e16b1bSMatthew G. Knepley   PetscInt           Np, p, dim = 2, *species;
124860e16b1bSMatthew G. Knepley   PetscReal          species_color;
1249d0c080abSJoseph Pusztay 
1250d0c080abSJoseph Pusztay   PetscFunctionBegin;
12513ba16761SJacob Faibussowitsch   if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
125260e16b1bSMatthew G. Knepley   PetscCall(TSGetDM(ts, &dm));
1253d0c080abSJoseph Pusztay   if (!step) {
1254d0c080abSJoseph Pusztay     PetscDrawAxis axis;
1255ab43fcacSJoe Pusztay     PetscReal     dmboxlower[2], dmboxupper[2];
1256f98b2f00SMatthew G. Knepley 
12579566063dSJacob Faibussowitsch     PetscCall(TSGetDM(ts, &dm));
12589566063dSJacob Faibussowitsch     PetscCall(DMGetDimension(dm, &dim));
12593c633725SBarry Smith     PetscCheck(dim == 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "Monitor only supports two dimensional fields");
12609566063dSJacob Faibussowitsch     PetscCall(DMSwarmGetCellDM(dm, &cdm));
12619566063dSJacob Faibussowitsch     PetscCall(DMGetBoundingBox(cdm, dmboxlower, dmboxupper));
12629566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(u, &Np));
1263d7462660SMatthew Knepley     Np /= dim * 2;
12649566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPGetAxis(ctx->sp, &axis));
12658c87cf4dSdanfinn     if (ctx->phase) {
12669566063dSJacob Faibussowitsch       PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "V"));
126760e16b1bSMatthew G. Knepley       PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], -10, 10));
12688c87cf4dSdanfinn     } else {
12699566063dSJacob Faibussowitsch       PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "Y"));
12709566063dSJacob Faibussowitsch       PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], dmboxlower[1], dmboxupper[1]));
12718c87cf4dSdanfinn     }
12729566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetHoldLimits(axis, PETSC_TRUE));
12739566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPReset(ctx->sp));
1274d0c080abSJoseph Pusztay   }
127560e16b1bSMatthew G. Knepley   if (ctx->multispecies) PetscCall(DMSwarmGetField(dm, "species", NULL, NULL, (void **)&species));
12769566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(u, &Np));
1277d7462660SMatthew Knepley   Np /= dim * 2;
1278d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) {
12799566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPGetDraw(ctx->sp, &draw));
128048a46eb9SPierre Jolivet     if ((ctx->retain == 0) || (ctx->retain > 0 && !(step % ctx->retain))) PetscCall(PetscDrawClear(draw));
12819566063dSJacob Faibussowitsch     PetscCall(PetscDrawFlush(draw));
12829566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPReset(ctx->sp));
1283f98b2f00SMatthew G. Knepley     PetscCall(VecGetArrayRead(u, &yy));
1284f98b2f00SMatthew G. Knepley     for (p = 0; p < Np; ++p) {
1285f98b2f00SMatthew G. Knepley       PetscReal x, y;
1286f98b2f00SMatthew G. Knepley 
1287f98b2f00SMatthew G. Knepley       if (ctx->phase) {
1288f98b2f00SMatthew G. Knepley         x = PetscRealPart(yy[p * dim * 2]);
1289f98b2f00SMatthew G. Knepley         y = PetscRealPart(yy[p * dim * 2 + dim]);
1290f98b2f00SMatthew G. Knepley       } else {
1291f98b2f00SMatthew G. Knepley         x = PetscRealPart(yy[p * dim * 2]);
1292f98b2f00SMatthew G. Knepley         y = PetscRealPart(yy[p * dim * 2 + 1]);
1293f98b2f00SMatthew G. Knepley       }
129460e16b1bSMatthew G. Knepley       if (ctx->multispecies) {
129560e16b1bSMatthew G. Knepley         species_color = species[p] + 2;
129660e16b1bSMatthew G. Knepley         PetscCall(PetscDrawSPAddPointColorized(ctx->sp, &x, &y, &species_color));
129760e16b1bSMatthew G. Knepley       } else {
129860e16b1bSMatthew G. Knepley         PetscCall(PetscDrawSPAddPoint(ctx->sp, &x, &y));
129960e16b1bSMatthew G. Knepley       }
1300f98b2f00SMatthew G. Knepley       PetscCall(PetscDrawSPAddPoint(ctx->sp, &x, &y));
1301f98b2f00SMatthew G. Knepley     }
1302f98b2f00SMatthew G. Knepley     PetscCall(VecRestoreArrayRead(u, &yy));
13039566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPDraw(ctx->sp, PETSC_FALSE));
13049566063dSJacob Faibussowitsch     PetscCall(PetscDrawSPSave(ctx->sp));
130560e16b1bSMatthew G. Knepley     if (ctx->multispecies) PetscCall(DMSwarmRestoreField(dm, "species", NULL, NULL, (void **)&species));
130660e16b1bSMatthew G. Knepley   }
130760e16b1bSMatthew G. Knepley   PetscFunctionReturn(PETSC_SUCCESS);
130860e16b1bSMatthew G. Knepley }
130960e16b1bSMatthew G. Knepley 
131060e16b1bSMatthew G. Knepley /*@C
131120f4b53cSBarry Smith   TSMonitorHGSwarmSolution - Graphically displays histograms of `DMSWARM` particles
131260e16b1bSMatthew G. Knepley 
131360e16b1bSMatthew G. Knepley   Input Parameters:
131420f4b53cSBarry Smith + ts    - the `TS` context
131560e16b1bSMatthew G. Knepley . step  - current time-step
131660e16b1bSMatthew G. Knepley . ptime - current time
131760e16b1bSMatthew G. Knepley . u     - current solution
131820f4b53cSBarry Smith - dctx  - the `TSMonitorSPCtx` object that contains all the options for the monitoring, this is created with `TSMonitorHGCtxCreate()`
131960e16b1bSMatthew G. Knepley 
132020f4b53cSBarry Smith   Options Database Keys:
132160e16b1bSMatthew G. Knepley + -ts_monitor_hg_swarm <n>             - Monitor the solution every n steps, or -1 for plotting only the final solution
132260e16b1bSMatthew G. Knepley . -ts_monitor_hg_swarm_species <num>   - Number of species to histogram
132360e16b1bSMatthew G. Knepley . -ts_monitor_hg_swarm_bins <num>      - Number of histogram bins
132460e16b1bSMatthew G. Knepley - -ts_monitor_hg_swarm_velocity <bool> - Plot in velocity space, as opposed to coordinate space
132560e16b1bSMatthew G. Knepley 
132660e16b1bSMatthew G. Knepley   Level: intermediate
132760e16b1bSMatthew G. Knepley 
132820f4b53cSBarry Smith   Note:
132960e16b1bSMatthew G. Knepley   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
133060e16b1bSMatthew G. Knepley   to be used during the `TS` integration.
133160e16b1bSMatthew G. Knepley 
133260e16b1bSMatthew G. Knepley .seealso: `TSMonitoSet()`
133360e16b1bSMatthew G. Knepley @*/
133460e16b1bSMatthew G. Knepley PetscErrorCode TSMonitorHGSwarmSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx)
133560e16b1bSMatthew G. Knepley {
133660e16b1bSMatthew G. Knepley   TSMonitorHGCtx     ctx = (TSMonitorHGCtx)dctx;
133760e16b1bSMatthew G. Knepley   PetscDraw          draw;
133860e16b1bSMatthew G. Knepley   DM                 sw;
133960e16b1bSMatthew G. Knepley   const PetscScalar *yy;
134060e16b1bSMatthew G. Knepley   PetscInt          *species;
134160e16b1bSMatthew G. Knepley   PetscInt           dim, d = 0, Np, p, Ns, s;
134260e16b1bSMatthew G. Knepley 
134360e16b1bSMatthew G. Knepley   PetscFunctionBegin;
134460e16b1bSMatthew G. Knepley   if (step < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
134560e16b1bSMatthew G. Knepley   PetscCall(TSGetDM(ts, &sw));
134660e16b1bSMatthew G. Knepley   PetscCall(DMGetDimension(sw, &dim));
134760e16b1bSMatthew G. Knepley   PetscCall(DMSwarmGetNumSpecies(sw, &Ns));
134860e16b1bSMatthew G. Knepley   Ns = PetscMin(Ns, ctx->Ns);
134960e16b1bSMatthew G. Knepley   PetscCall(VecGetLocalSize(u, &Np));
135060e16b1bSMatthew G. Knepley   Np /= dim * 2;
135160e16b1bSMatthew G. Knepley   if (!step) {
135260e16b1bSMatthew G. Knepley     PetscDrawAxis axis;
135360e16b1bSMatthew G. Knepley     char          title[PETSC_MAX_PATH_LEN];
135460e16b1bSMatthew G. Knepley 
135560e16b1bSMatthew G. Knepley     for (s = 0; s < Ns; ++s) {
135660e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGGetAxis(ctx->hg[s], &axis));
135760e16b1bSMatthew G. Knepley       PetscCall(PetscSNPrintf(title, PETSC_MAX_PATH_LEN, "Species %" PetscInt_FMT, s));
135860e16b1bSMatthew G. Knepley       if (ctx->velocity) PetscCall(PetscDrawAxisSetLabels(axis, title, "V", "N"));
135960e16b1bSMatthew G. Knepley       else PetscCall(PetscDrawAxisSetLabels(axis, title, "X", "N"));
136060e16b1bSMatthew G. Knepley     }
136160e16b1bSMatthew G. Knepley   }
136260e16b1bSMatthew G. Knepley   if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) {
136360e16b1bSMatthew G. Knepley     PetscCall(DMSwarmGetField(sw, "species", NULL, NULL, (void **)&species));
136460e16b1bSMatthew G. Knepley     for (s = 0; s < Ns; ++s) {
136560e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGReset(ctx->hg[s]));
136660e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGGetDraw(ctx->hg[s], &draw));
136760e16b1bSMatthew G. Knepley       PetscCall(PetscDrawClear(draw));
136860e16b1bSMatthew G. Knepley       PetscCall(PetscDrawFlush(draw));
136960e16b1bSMatthew G. Knepley     }
137060e16b1bSMatthew G. Knepley     PetscCall(VecGetArrayRead(u, &yy));
137160e16b1bSMatthew G. Knepley     for (p = 0; p < Np; ++p) {
137260e16b1bSMatthew G. Knepley       const PetscInt s = species[p] < Ns ? species[p] : 0;
137360e16b1bSMatthew G. Knepley       PetscReal      v;
137460e16b1bSMatthew G. Knepley 
137560e16b1bSMatthew G. Knepley       if (ctx->velocity) v = PetscRealPart(yy[p * dim * 2 + d + dim]);
137660e16b1bSMatthew G. Knepley       else v = PetscRealPart(yy[p * dim * 2 + d]);
137760e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGAddValue(ctx->hg[s], v));
137860e16b1bSMatthew G. Knepley     }
137960e16b1bSMatthew G. Knepley     PetscCall(VecRestoreArrayRead(u, &yy));
138060e16b1bSMatthew G. Knepley     for (s = 0; s < Ns; ++s) {
138160e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGDraw(ctx->hg[s]));
138260e16b1bSMatthew G. Knepley       PetscCall(PetscDrawHGSave(ctx->hg[s]));
138360e16b1bSMatthew G. Knepley     }
138460e16b1bSMatthew G. Knepley     PetscCall(DMSwarmRestoreField(sw, "species", NULL, NULL, (void **)&species));
1385d0c080abSJoseph Pusztay   }
13863ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1387d0c080abSJoseph Pusztay }
1388d0c080abSJoseph Pusztay 
1389d0c080abSJoseph Pusztay /*@C
1390bcf0153eSBarry Smith   TSMonitorError - Monitors progress of the `TS` solvers by printing the 2 norm of the error at each timestep
1391d0c080abSJoseph Pusztay 
1392c3339decSBarry Smith   Collective
1393d0c080abSJoseph Pusztay 
1394d0c080abSJoseph Pusztay   Input Parameters:
1395bcf0153eSBarry Smith + ts    - the `TS` context
1396d0c080abSJoseph Pusztay . step  - current time-step
1397d0c080abSJoseph Pusztay . ptime - current time
1398d0c080abSJoseph Pusztay . u     - current solution
1399b43aa488SJacob Faibussowitsch - vf    - unused context
1400d0c080abSJoseph Pusztay 
1401bcf0153eSBarry Smith   Options Database Key:
1402bcf0153eSBarry Smith . -ts_monitor_error - create a graphical monitor of error history
1403bcf0153eSBarry Smith 
1404d0c080abSJoseph Pusztay   Level: intermediate
1405d0c080abSJoseph Pusztay 
14063a61192cSBarry Smith   Notes:
14073a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
1408bcf0153eSBarry Smith   to be used during the `TS` integration.
14093a61192cSBarry Smith 
1410bcf0153eSBarry Smith   The user must provide the solution using `TSSetSolutionFunction()` to use this monitor.
1411d0c080abSJoseph Pusztay 
14121cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()`
1413d0c080abSJoseph Pusztay @*/
1414d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorError(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf)
1415d71ae5a4SJacob Faibussowitsch {
141607eaae0cSMatthew G. Knepley   DM        dm;
141707eaae0cSMatthew G. Knepley   PetscDS   ds = NULL;
141807eaae0cSMatthew G. Knepley   PetscInt  Nf = -1, f;
1419d0c080abSJoseph Pusztay   PetscBool flg;
1420d0c080abSJoseph Pusztay 
1421d0c080abSJoseph Pusztay   PetscFunctionBegin;
14229566063dSJacob Faibussowitsch   PetscCall(TSGetDM(ts, &dm));
14239566063dSJacob Faibussowitsch   if (dm) PetscCall(DMGetDS(dm, &ds));
14249566063dSJacob Faibussowitsch   if (ds) PetscCall(PetscDSGetNumFields(ds, &Nf));
142507eaae0cSMatthew G. Knepley   if (Nf <= 0) {
142607eaae0cSMatthew G. Knepley     Vec       y;
142707eaae0cSMatthew G. Knepley     PetscReal nrm;
142807eaae0cSMatthew G. Knepley 
14299566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(u, &y));
14309566063dSJacob Faibussowitsch     PetscCall(TSComputeSolutionFunction(ts, ptime, y));
14319566063dSJacob Faibussowitsch     PetscCall(VecAXPY(y, -1.0, u));
14329566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERASCII, &flg));
1433d0c080abSJoseph Pusztay     if (flg) {
14349566063dSJacob Faibussowitsch       PetscCall(VecNorm(y, NORM_2, &nrm));
14359566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(vf->viewer, "2-norm of error %g\n", (double)nrm));
1436d0c080abSJoseph Pusztay     }
14379566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &flg));
14381baa6e33SBarry Smith     if (flg) PetscCall(VecView(y, vf->viewer));
14399566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&y));
144007eaae0cSMatthew G. Knepley   } else {
144107eaae0cSMatthew G. Knepley     PetscErrorCode (**exactFuncs)(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx);
144207eaae0cSMatthew G. Knepley     void    **ctxs;
144307eaae0cSMatthew G. Knepley     Vec       v;
144407eaae0cSMatthew G. Knepley     PetscReal ferrors[1];
144507eaae0cSMatthew G. Knepley 
14469566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(Nf, &exactFuncs, Nf, &ctxs));
14479566063dSJacob Faibussowitsch     for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(ds, f, &exactFuncs[f], &ctxs[f]));
14489566063dSJacob Faibussowitsch     PetscCall(DMComputeL2FieldDiff(dm, ptime, exactFuncs, ctxs, u, ferrors));
14499566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Timestep: %04d time = %-8.4g \t L_2 Error: [", (int)step, (double)ptime));
145007eaae0cSMatthew G. Knepley     for (f = 0; f < Nf; ++f) {
14519566063dSJacob Faibussowitsch       if (f > 0) PetscCall(PetscPrintf(PETSC_COMM_WORLD, ", "));
14529566063dSJacob Faibussowitsch       PetscCall(PetscPrintf(PETSC_COMM_WORLD, "%2.3g", (double)ferrors[f]));
145307eaae0cSMatthew G. Knepley     }
14549566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_WORLD, "]\n"));
145507eaae0cSMatthew G. Knepley 
14569566063dSJacob Faibussowitsch     PetscCall(VecViewFromOptions(u, NULL, "-sol_vec_view"));
145707eaae0cSMatthew G. Knepley 
14589566063dSJacob Faibussowitsch     PetscCall(PetscOptionsHasName(NULL, NULL, "-exact_vec_view", &flg));
145907eaae0cSMatthew G. Knepley     if (flg) {
14609566063dSJacob Faibussowitsch       PetscCall(DMGetGlobalVector(dm, &v));
14619566063dSJacob Faibussowitsch       PetscCall(DMProjectFunction(dm, ptime, exactFuncs, ctxs, INSERT_ALL_VALUES, v));
14629566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)v, "Exact Solution"));
14639566063dSJacob Faibussowitsch       PetscCall(VecViewFromOptions(v, NULL, "-exact_vec_view"));
14649566063dSJacob Faibussowitsch       PetscCall(DMRestoreGlobalVector(dm, &v));
146507eaae0cSMatthew G. Knepley     }
14669566063dSJacob Faibussowitsch     PetscCall(PetscFree2(exactFuncs, ctxs));
146707eaae0cSMatthew G. Knepley   }
14683ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1469d0c080abSJoseph Pusztay }
1470d0c080abSJoseph Pusztay 
1471d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSNESIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx)
1472d71ae5a4SJacob Faibussowitsch {
1473d0c080abSJoseph Pusztay   TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx;
1474d0c080abSJoseph Pusztay   PetscReal      x   = ptime, y;
1475d0c080abSJoseph Pusztay   PetscInt       its;
1476d0c080abSJoseph Pusztay 
1477d0c080abSJoseph Pusztay   PetscFunctionBegin;
14783ba16761SJacob Faibussowitsch   if (n < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
1479d0c080abSJoseph Pusztay   if (!n) {
1480d0c080abSJoseph Pusztay     PetscDrawAxis axis;
14819566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis));
14829566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetLabels(axis, "Nonlinear iterations as function of time", "Time", "SNES Iterations"));
14839566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGReset(ctx->lg));
1484d0c080abSJoseph Pusztay     ctx->snes_its = 0;
1485d0c080abSJoseph Pusztay   }
14869566063dSJacob Faibussowitsch   PetscCall(TSGetSNESIterations(ts, &its));
1487d0c080abSJoseph Pusztay   y = its - ctx->snes_its;
14889566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y));
1489d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) {
14909566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(ctx->lg));
14919566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(ctx->lg));
1492d0c080abSJoseph Pusztay   }
1493d0c080abSJoseph Pusztay   ctx->snes_its = its;
14943ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1495d0c080abSJoseph Pusztay }
1496d0c080abSJoseph Pusztay 
1497d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGKSPIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx)
1498d71ae5a4SJacob Faibussowitsch {
1499d0c080abSJoseph Pusztay   TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx;
1500d0c080abSJoseph Pusztay   PetscReal      x   = ptime, y;
1501d0c080abSJoseph Pusztay   PetscInt       its;
1502d0c080abSJoseph Pusztay 
1503d0c080abSJoseph Pusztay   PetscFunctionBegin;
15043ba16761SJacob Faibussowitsch   if (n < 0) PetscFunctionReturn(PETSC_SUCCESS); /* -1 indicates interpolated solution */
1505d0c080abSJoseph Pusztay   if (!n) {
1506d0c080abSJoseph Pusztay     PetscDrawAxis axis;
15079566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis));
15089566063dSJacob Faibussowitsch     PetscCall(PetscDrawAxisSetLabels(axis, "Linear iterations as function of time", "Time", "KSP Iterations"));
15099566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGReset(ctx->lg));
1510d0c080abSJoseph Pusztay     ctx->ksp_its = 0;
1511d0c080abSJoseph Pusztay   }
15129566063dSJacob Faibussowitsch   PetscCall(TSGetKSPIterations(ts, &its));
1513d0c080abSJoseph Pusztay   y = its - ctx->ksp_its;
15149566063dSJacob Faibussowitsch   PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y));
1515d0c080abSJoseph Pusztay   if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) {
15169566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGDraw(ctx->lg));
15179566063dSJacob Faibussowitsch     PetscCall(PetscDrawLGSave(ctx->lg));
1518d0c080abSJoseph Pusztay   }
1519d0c080abSJoseph Pusztay   ctx->ksp_its = its;
15203ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1521d0c080abSJoseph Pusztay }
1522d0c080abSJoseph Pusztay 
1523d0c080abSJoseph Pusztay /*@C
1524bcf0153eSBarry Smith   TSMonitorEnvelopeCtxCreate - Creates a context for use with `TSMonitorEnvelope()`
1525d0c080abSJoseph Pusztay 
1526c3339decSBarry Smith   Collective
1527d0c080abSJoseph Pusztay 
15282fe279fdSBarry Smith   Input Parameter:
1529bcf0153eSBarry Smith . ts - the `TS` solver object
1530d0c080abSJoseph Pusztay 
1531d0c080abSJoseph Pusztay   Output Parameter:
1532d0c080abSJoseph Pusztay . ctx - the context
1533d0c080abSJoseph Pusztay 
1534d0c080abSJoseph Pusztay   Level: intermediate
1535d0c080abSJoseph Pusztay 
15361cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()`
1537d0c080abSJoseph Pusztay @*/
1538d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxCreate(TS ts, TSMonitorEnvelopeCtx *ctx)
1539d71ae5a4SJacob Faibussowitsch {
1540d0c080abSJoseph Pusztay   PetscFunctionBegin;
15419566063dSJacob Faibussowitsch   PetscCall(PetscNew(ctx));
15423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1543d0c080abSJoseph Pusztay }
1544d0c080abSJoseph Pusztay 
1545d0c080abSJoseph Pusztay /*@C
1546d0c080abSJoseph Pusztay   TSMonitorEnvelope - Monitors the maximum and minimum value of each component of the solution
1547d0c080abSJoseph Pusztay 
1548c3339decSBarry Smith   Collective
1549d0c080abSJoseph Pusztay 
1550d0c080abSJoseph Pusztay   Input Parameters:
1551195e9b02SBarry Smith + ts    - the `TS` context
1552d0c080abSJoseph Pusztay . step  - current time-step
1553d0c080abSJoseph Pusztay . ptime - current time
1554d0c080abSJoseph Pusztay . u     - current solution
1555d0c080abSJoseph Pusztay - dctx  - the envelope context
1556d0c080abSJoseph Pusztay 
1557bcf0153eSBarry Smith   Options Database Key:
155867b8a455SSatish Balay . -ts_monitor_envelope - determine maximum and minimum value of each component of the solution over the solution time
1559d0c080abSJoseph Pusztay 
1560d0c080abSJoseph Pusztay   Level: intermediate
1561d0c080abSJoseph Pusztay 
1562d0c080abSJoseph Pusztay   Notes:
1563bcf0153eSBarry Smith   After a solve you can use `TSMonitorEnvelopeGetBounds()` to access the envelope
15643a61192cSBarry Smith 
15653a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
1566bcf0153eSBarry Smith   to be used during the `TS` integration.
1567d0c080abSJoseph Pusztay 
15681cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxCreate()`
1569d0c080abSJoseph Pusztay @*/
1570d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelope(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx)
1571d71ae5a4SJacob Faibussowitsch {
1572d0c080abSJoseph Pusztay   TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)dctx;
1573d0c080abSJoseph Pusztay 
1574d0c080abSJoseph Pusztay   PetscFunctionBegin;
1575d0c080abSJoseph Pusztay   if (!ctx->max) {
15769566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(u, &ctx->max));
15779566063dSJacob Faibussowitsch     PetscCall(VecDuplicate(u, &ctx->min));
15789566063dSJacob Faibussowitsch     PetscCall(VecCopy(u, ctx->max));
15799566063dSJacob Faibussowitsch     PetscCall(VecCopy(u, ctx->min));
1580d0c080abSJoseph Pusztay   } else {
15819566063dSJacob Faibussowitsch     PetscCall(VecPointwiseMax(ctx->max, u, ctx->max));
15829566063dSJacob Faibussowitsch     PetscCall(VecPointwiseMin(ctx->min, u, ctx->min));
1583d0c080abSJoseph Pusztay   }
15843ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1585d0c080abSJoseph Pusztay }
1586d0c080abSJoseph Pusztay 
1587d0c080abSJoseph Pusztay /*@C
1588d0c080abSJoseph Pusztay   TSMonitorEnvelopeGetBounds - Gets the bounds for the components of the solution
1589d0c080abSJoseph Pusztay 
1590c3339decSBarry Smith   Collective
1591d0c080abSJoseph Pusztay 
1592d0c080abSJoseph Pusztay   Input Parameter:
1593bcf0153eSBarry Smith . ts - the `TS` context
1594d0c080abSJoseph Pusztay 
1595d8d19677SJose E. Roman   Output Parameters:
1596d0c080abSJoseph Pusztay + max - the maximum values
1597d0c080abSJoseph Pusztay - min - the minimum values
1598d0c080abSJoseph Pusztay 
1599195e9b02SBarry Smith   Level: intermediate
1600195e9b02SBarry Smith 
1601d0c080abSJoseph Pusztay   Notes:
1602bcf0153eSBarry Smith   If the `TS` does not have a `TSMonitorEnvelopeCtx` associated with it then this function is ignored
1603d0c080abSJoseph Pusztay 
16041cc06b55SBarry Smith .seealso: [](ch_ts), `TSMonitorEnvelopeCtx`, `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`
1605d0c080abSJoseph Pusztay @*/
1606d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeGetBounds(TS ts, Vec *max, Vec *min)
1607d71ae5a4SJacob Faibussowitsch {
1608d0c080abSJoseph Pusztay   PetscInt i;
1609d0c080abSJoseph Pusztay 
1610d0c080abSJoseph Pusztay   PetscFunctionBegin;
1611d0c080abSJoseph Pusztay   if (max) *max = NULL;
1612d0c080abSJoseph Pusztay   if (min) *min = NULL;
1613d0c080abSJoseph Pusztay   for (i = 0; i < ts->numbermonitors; i++) {
1614d0c080abSJoseph Pusztay     if (ts->monitor[i] == TSMonitorEnvelope) {
1615d0c080abSJoseph Pusztay       TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)ts->monitorcontext[i];
1616d0c080abSJoseph Pusztay       if (max) *max = ctx->max;
1617d0c080abSJoseph Pusztay       if (min) *min = ctx->min;
1618d0c080abSJoseph Pusztay       break;
1619d0c080abSJoseph Pusztay     }
1620d0c080abSJoseph Pusztay   }
16213ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1622d0c080abSJoseph Pusztay }
1623d0c080abSJoseph Pusztay 
1624d0c080abSJoseph Pusztay /*@C
1625bcf0153eSBarry Smith   TSMonitorEnvelopeCtxDestroy - Destroys a context that was created  with `TSMonitorEnvelopeCtxCreate()`.
1626d0c080abSJoseph Pusztay 
1627c3339decSBarry Smith   Collective
1628d0c080abSJoseph Pusztay 
1629d0c080abSJoseph Pusztay   Input Parameter:
1630d0c080abSJoseph Pusztay . ctx - the monitor context
1631d0c080abSJoseph Pusztay 
1632d0c080abSJoseph Pusztay   Level: intermediate
1633d0c080abSJoseph Pusztay 
16341cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep()`
1635d0c080abSJoseph Pusztay @*/
1636d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxDestroy(TSMonitorEnvelopeCtx *ctx)
1637d71ae5a4SJacob Faibussowitsch {
1638d0c080abSJoseph Pusztay   PetscFunctionBegin;
16399566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&(*ctx)->min));
16409566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&(*ctx)->max));
16419566063dSJacob Faibussowitsch   PetscCall(PetscFree(*ctx));
16423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1643d0c080abSJoseph Pusztay }
1644d0c080abSJoseph Pusztay 
1645d0c080abSJoseph Pusztay /*@C
1646bcf0153eSBarry Smith   TSDMSwarmMonitorMoments - Monitors the first three moments of a `DMSWARM` being evolved by the `TS`
1647d0c080abSJoseph Pusztay 
164820f4b53cSBarry Smith   Not Collective
1649d0c080abSJoseph Pusztay 
1650d0c080abSJoseph Pusztay   Input Parameters:
1651bcf0153eSBarry Smith + ts   - the `TS` context
1652d0c080abSJoseph Pusztay . step - current timestep
1653d0c080abSJoseph Pusztay . t    - current time
165414d0ab18SJacob Faibussowitsch . U    - current solution
165514d0ab18SJacob Faibussowitsch - vf   - not used
1656d0c080abSJoseph Pusztay 
1657bcf0153eSBarry Smith   Options Database Key:
165867b8a455SSatish Balay . -ts_dmswarm_monitor_moments - Monitor moments of particle distribution
1659d0c080abSJoseph Pusztay 
1660d0c080abSJoseph Pusztay   Level: intermediate
1661d0c080abSJoseph Pusztay 
1662d0c080abSJoseph Pusztay   Notes:
1663bcf0153eSBarry Smith   This requires a `DMSWARM` be attached to the `TS`.
1664d0c080abSJoseph Pusztay 
16653a61192cSBarry Smith   This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor
16663a61192cSBarry Smith   to be used during the TS integration.
16673a61192cSBarry Smith 
16681cc06b55SBarry Smith .seealso: [](ch_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `DMSWARM`
1669d0c080abSJoseph Pusztay @*/
1670d71ae5a4SJacob Faibussowitsch PetscErrorCode TSDMSwarmMonitorMoments(TS ts, PetscInt step, PetscReal t, Vec U, PetscViewerAndFormat *vf)
1671d71ae5a4SJacob Faibussowitsch {
1672d0c080abSJoseph Pusztay   DM                 sw;
1673d0c080abSJoseph Pusztay   const PetscScalar *u;
1674d0c080abSJoseph Pusztay   PetscReal          m = 1.0, totE = 0., totMom[3] = {0., 0., 0.};
1675d0c080abSJoseph Pusztay   PetscInt           dim, d, Np, p;
1676d0c080abSJoseph Pusztay   MPI_Comm           comm;
1677d0c080abSJoseph Pusztay 
1678d0c080abSJoseph Pusztay   PetscFunctionBeginUser;
167914d0ab18SJacob Faibussowitsch   (void)t;
168014d0ab18SJacob Faibussowitsch   (void)vf;
16819566063dSJacob Faibussowitsch   PetscCall(TSGetDM(ts, &sw));
16823ba16761SJacob Faibussowitsch   if (!sw || step % ts->monitorFrequency != 0) PetscFunctionReturn(PETSC_SUCCESS);
16839566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)ts, &comm));
16849566063dSJacob Faibussowitsch   PetscCall(DMGetDimension(sw, &dim));
16859566063dSJacob Faibussowitsch   PetscCall(VecGetLocalSize(U, &Np));
1686d0c080abSJoseph Pusztay   Np /= dim;
16879566063dSJacob Faibussowitsch   PetscCall(VecGetArrayRead(U, &u));
1688d0c080abSJoseph Pusztay   for (p = 0; p < Np; ++p) {
1689d0c080abSJoseph Pusztay     for (d = 0; d < dim; ++d) {
1690d0c080abSJoseph Pusztay       totE += PetscRealPart(u[p * dim + d] * u[p * dim + d]);
1691d0c080abSJoseph Pusztay       totMom[d] += PetscRealPart(u[p * dim + d]);
1692d0c080abSJoseph Pusztay     }
1693d0c080abSJoseph Pusztay   }
16949566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayRead(U, &u));
1695d0c080abSJoseph Pusztay   for (d = 0; d < dim; ++d) totMom[d] *= m;
1696d0c080abSJoseph Pusztay   totE *= 0.5 * m;
169763a3b9bcSJacob Faibussowitsch   PetscCall(PetscPrintf(comm, "Step %4" PetscInt_FMT " Total Energy: %10.8lf", step, (double)totE));
169863a3b9bcSJacob Faibussowitsch   for (d = 0; d < dim; ++d) PetscCall(PetscPrintf(comm, "    Total Momentum %c: %10.8lf", (char)('x' + d), (double)totMom[d]));
16999566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(comm, "\n"));
17003ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1701d0c080abSJoseph Pusztay }
1702