1d0c080abSJoseph Pusztay #include <petsc/private/tsimpl.h> /*I "petscts.h" I*/ 2d0c080abSJoseph Pusztay #include <petscdm.h> 307eaae0cSMatthew G. Knepley #include <petscds.h> 4ab43fcacSJoe Pusztay #include <petscdmswarm.h> 5d0c080abSJoseph Pusztay #include <petscdraw.h> 6d0c080abSJoseph Pusztay 7d0c080abSJoseph Pusztay /*@C 8bcf0153eSBarry Smith TSMonitor - Runs all user-provided monitor routines set using `TSMonitorSet()` 9d0c080abSJoseph Pusztay 10bcf0153eSBarry Smith Collective on ts 11d0c080abSJoseph Pusztay 12d0c080abSJoseph Pusztay Input Parameters: 13bcf0153eSBarry Smith + ts - time stepping context obtained from `TSCreate()` 14d0c080abSJoseph Pusztay . step - step number that has just completed 15d0c080abSJoseph Pusztay . ptime - model time of the state 16d0c080abSJoseph Pusztay - u - state at the current model time 17d0c080abSJoseph Pusztay 18bcf0153eSBarry Smith Level: developer 19bcf0153eSBarry Smith 20d0c080abSJoseph Pusztay Notes: 21bcf0153eSBarry Smith `TSMonitor()` is typically used automatically within the time stepping implementations. 22d0c080abSJoseph Pusztay Users would almost never call this routine directly. 23d0c080abSJoseph Pusztay 24d0c080abSJoseph Pusztay A step of -1 indicates that the monitor is being called on a solution obtained by interpolating from computed solutions 25d0c080abSJoseph Pusztay 26bcf0153eSBarry Smith .seealso: `TS`, `TSMonitorSet()`, `TSMonitorSetFromOptions()` 27d0c080abSJoseph Pusztay @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitor(TS ts, PetscInt step, PetscReal ptime, Vec u) 29d71ae5a4SJacob Faibussowitsch { 30d0c080abSJoseph Pusztay DM dm; 31d0c080abSJoseph Pusztay PetscInt i, n = ts->numbermonitors; 32d0c080abSJoseph Pusztay 33d0c080abSJoseph Pusztay PetscFunctionBegin; 34d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 35d0c080abSJoseph Pusztay PetscValidHeaderSpecific(u, VEC_CLASSID, 4); 36d0c080abSJoseph Pusztay 379566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 389566063dSJacob Faibussowitsch PetscCall(DMSetOutputSequenceNumber(dm, step, ptime)); 39d0c080abSJoseph Pusztay 409566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(u)); 4148a46eb9SPierre Jolivet for (i = 0; i < n; i++) PetscCall((*ts->monitor[i])(ts, step, ptime, u, ts->monitorcontext[i])); 429566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(u)); 43d0c080abSJoseph Pusztay PetscFunctionReturn(0); 44d0c080abSJoseph Pusztay } 45d0c080abSJoseph Pusztay 46d0c080abSJoseph Pusztay /*@C 47d0c080abSJoseph Pusztay TSMonitorSetFromOptions - Sets a monitor function and viewer appropriate for the type indicated by the user 48d0c080abSJoseph Pusztay 49bcf0153eSBarry Smith Collective on ts 50d0c080abSJoseph Pusztay 51d0c080abSJoseph Pusztay Input Parameters: 52bcf0153eSBarry Smith + ts - `TS` object you wish to monitor 53d0c080abSJoseph Pusztay . name - the monitor type one is seeking 54d0c080abSJoseph Pusztay . help - message indicating what monitoring is done 55d0c080abSJoseph Pusztay . manual - manual page for the monitor 56d0c080abSJoseph Pusztay . monitor - the monitor function 57bcf0153eSBarry Smith - monitorsetup - a function that is called once ONLY if the user selected this monitor that may set additional features of the `TS` or `PetscViewer` objects 58d0c080abSJoseph Pusztay 59d0c080abSJoseph Pusztay Level: developer 60d0c080abSJoseph Pusztay 61bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `PetscOptionsGetViewer()`, `PetscOptionsGetReal()`, `PetscOptionsHasName()`, `PetscOptionsGetString()`, 62db781477SPatrick Sanan `PetscOptionsGetIntArray()`, `PetscOptionsGetRealArray()`, `PetscOptionsBool()` 63db781477SPatrick Sanan `PetscOptionsInt()`, `PetscOptionsString()`, `PetscOptionsReal()`, `PetscOptionsBool()`, 64db781477SPatrick Sanan `PetscOptionsName()`, `PetscOptionsBegin()`, `PetscOptionsEnd()`, `PetscOptionsHeadBegin()`, 65c2e3fba1SPatrick Sanan `PetscOptionsStringArray()`, `PetscOptionsRealArray()`, `PetscOptionsScalar()`, 66db781477SPatrick Sanan `PetscOptionsBoolGroupBegin()`, `PetscOptionsBoolGroup()`, `PetscOptionsBoolGroupEnd()`, 67db781477SPatrick Sanan `PetscOptionsFList()`, `PetscOptionsEList()` 68d0c080abSJoseph Pusztay @*/ 69d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSetFromOptions(TS ts, const char name[], const char help[], const char manual[], PetscErrorCode (*monitor)(TS, PetscInt, PetscReal, Vec, PetscViewerAndFormat *), PetscErrorCode (*monitorsetup)(TS, PetscViewerAndFormat *)) 70d71ae5a4SJacob Faibussowitsch { 71d0c080abSJoseph Pusztay PetscViewer viewer; 72d0c080abSJoseph Pusztay PetscViewerFormat format; 73d0c080abSJoseph Pusztay PetscBool flg; 74d0c080abSJoseph Pusztay 75d0c080abSJoseph Pusztay PetscFunctionBegin; 769566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetViewer(PetscObjectComm((PetscObject)ts), ((PetscObject)ts)->options, ((PetscObject)ts)->prefix, name, &viewer, &format, &flg)); 77d0c080abSJoseph Pusztay if (flg) { 78d0c080abSJoseph Pusztay PetscViewerAndFormat *vf; 799566063dSJacob Faibussowitsch PetscCall(PetscViewerAndFormatCreate(viewer, format, &vf)); 809566063dSJacob Faibussowitsch PetscCall(PetscObjectDereference((PetscObject)viewer)); 811baa6e33SBarry Smith if (monitorsetup) PetscCall((*monitorsetup)(ts, vf)); 829566063dSJacob Faibussowitsch PetscCall(TSMonitorSet(ts, (PetscErrorCode(*)(TS, PetscInt, PetscReal, Vec, void *))monitor, vf, (PetscErrorCode(*)(void **))PetscViewerAndFormatDestroy)); 83d0c080abSJoseph Pusztay } 84d0c080abSJoseph Pusztay PetscFunctionReturn(0); 85d0c080abSJoseph Pusztay } 86d0c080abSJoseph Pusztay 87d0c080abSJoseph Pusztay /*@C 88d0c080abSJoseph Pusztay TSMonitorSet - Sets an ADDITIONAL function that is to be used at every 89d0c080abSJoseph Pusztay timestep to display the iteration's progress. 90d0c080abSJoseph Pusztay 91bcf0153eSBarry Smith Logically Collective on ts 92d0c080abSJoseph Pusztay 93d0c080abSJoseph Pusztay Input Parameters: 94bcf0153eSBarry Smith + ts - the `TS` context obtained from `TSCreate()` 95d0c080abSJoseph Pusztay . monitor - monitoring routine 96d0c080abSJoseph Pusztay . mctx - [optional] user-defined context for private data for the 97d0c080abSJoseph Pusztay monitor routine (use NULL if no context is desired) 98d0c080abSJoseph Pusztay - monitordestroy - [optional] routine that frees monitor context 99d0c080abSJoseph Pusztay (may be NULL) 100d0c080abSJoseph Pusztay 101d0c080abSJoseph Pusztay Calling sequence of monitor: 102d0c080abSJoseph Pusztay $ PetscErrorCode monitor(TS ts,PetscInt steps,PetscReal time,Vec u,void *mctx) 103d0c080abSJoseph Pusztay 104d0c080abSJoseph Pusztay + ts - the TS context 105d0c080abSJoseph Pusztay . steps - iteration number (after the final time step the monitor routine may be called with a step of -1, this indicates the solution has been interpolated to this time) 106d0c080abSJoseph Pusztay . time - current time 107d0c080abSJoseph Pusztay . u - current iterate 108d0c080abSJoseph Pusztay - mctx - [optional] monitoring context 109d0c080abSJoseph Pusztay 110bcf0153eSBarry Smith Level: intermediate 111bcf0153eSBarry Smith 112bcf0153eSBarry Smith Note: 113d0c080abSJoseph Pusztay This routine adds an additional monitor to the list of monitors that 114d0c080abSJoseph Pusztay already has been loaded. 115d0c080abSJoseph Pusztay 116bcf0153eSBarry Smith Fortran Note: 117bcf0153eSBarry Smith Only a single monitor function can be set for each `TS` object 118d0c080abSJoseph Pusztay 119bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorDefault()`, `TSMonitorCancel()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`, 1203a61192cSBarry Smith `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`, 1213a61192cSBarry Smith `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()`, `TSDMSwarmMonitorMoments()` 122d0c080abSJoseph Pusztay @*/ 123d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSet(TS ts, PetscErrorCode (*monitor)(TS, PetscInt, PetscReal, Vec, void *), void *mctx, PetscErrorCode (*mdestroy)(void **)) 124d71ae5a4SJacob Faibussowitsch { 125d0c080abSJoseph Pusztay PetscInt i; 126d0c080abSJoseph Pusztay PetscBool identical; 127d0c080abSJoseph Pusztay 128d0c080abSJoseph Pusztay PetscFunctionBegin; 129d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 130d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1319566063dSJacob Faibussowitsch PetscCall(PetscMonitorCompare((PetscErrorCode(*)(void))monitor, mctx, mdestroy, (PetscErrorCode(*)(void))ts->monitor[i], ts->monitorcontext[i], ts->monitordestroy[i], &identical)); 132d0c080abSJoseph Pusztay if (identical) PetscFunctionReturn(0); 133d0c080abSJoseph Pusztay } 1343c633725SBarry Smith PetscCheck(ts->numbermonitors < MAXTSMONITORS, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Too many monitors set"); 135d0c080abSJoseph Pusztay ts->monitor[ts->numbermonitors] = monitor; 136d0c080abSJoseph Pusztay ts->monitordestroy[ts->numbermonitors] = mdestroy; 137d0c080abSJoseph Pusztay ts->monitorcontext[ts->numbermonitors++] = (void *)mctx; 138d0c080abSJoseph Pusztay PetscFunctionReturn(0); 139d0c080abSJoseph Pusztay } 140d0c080abSJoseph Pusztay 141d0c080abSJoseph Pusztay /*@C 142d0c080abSJoseph Pusztay TSMonitorCancel - Clears all the monitors that have been set on a time-step object. 143d0c080abSJoseph Pusztay 144bcf0153eSBarry Smith Logically Collective on ts 145d0c080abSJoseph Pusztay 146d0c080abSJoseph Pusztay Input Parameters: 147bcf0153eSBarry Smith . ts - the `TS` context obtained from `TSCreate()` 148d0c080abSJoseph Pusztay 149d0c080abSJoseph Pusztay Level: intermediate 150d0c080abSJoseph Pusztay 151bcf0153eSBarry Smith Note: 152bcf0153eSBarry Smith There is no way to remove a single, specific monitor. 153bcf0153eSBarry Smith 154bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorDefault()`, `TSMonitorSet()` 155d0c080abSJoseph Pusztay @*/ 156d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorCancel(TS ts) 157d71ae5a4SJacob Faibussowitsch { 158d0c080abSJoseph Pusztay PetscInt i; 159d0c080abSJoseph Pusztay 160d0c080abSJoseph Pusztay PetscFunctionBegin; 161d0c080abSJoseph Pusztay PetscValidHeaderSpecific(ts, TS_CLASSID, 1); 162d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 16348a46eb9SPierre Jolivet if (ts->monitordestroy[i]) PetscCall((*ts->monitordestroy[i])(&ts->monitorcontext[i])); 164d0c080abSJoseph Pusztay } 165d0c080abSJoseph Pusztay ts->numbermonitors = 0; 166d0c080abSJoseph Pusztay PetscFunctionReturn(0); 167d0c080abSJoseph Pusztay } 168d0c080abSJoseph Pusztay 169d0c080abSJoseph Pusztay /*@C 170d0c080abSJoseph Pusztay TSMonitorDefault - The Default monitor, prints the timestep and time for each step 171d0c080abSJoseph Pusztay 172bcf0153eSBarry Smith Options Database Key: 1733a61192cSBarry Smith . -ts_monitor - monitors the time integration 1743a61192cSBarry Smith 175d0c080abSJoseph Pusztay Level: intermediate 176d0c080abSJoseph Pusztay 177bcf0153eSBarry Smith Notes: 178bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 179bcf0153eSBarry Smith to be used during the `TS` integration. 180bcf0153eSBarry Smith 181bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorSet()`, `TSDMSwarmMonitorMoments()`, `TSMonitorExtreme()`, `TSMonitorDrawSolution()`, 1823a61192cSBarry Smith `TSMonitorDrawSolutionPhase()`, `TSMonitorDrawSolutionFunction()`, `TSMonitorDrawError()`, `TSMonitorSolution()`, `TSMonitorSolutionVTK()`, 1833a61192cSBarry Smith `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorSPSwarmSolution()`, `TSMonitorError()`, `TSMonitorEnvelope()`, `TSDMSwarmMonitorMoments()` 184d0c080abSJoseph Pusztay @*/ 185d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDefault(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf) 186d71ae5a4SJacob Faibussowitsch { 187d0c080abSJoseph Pusztay PetscViewer viewer = vf->viewer; 188d0c080abSJoseph Pusztay PetscBool iascii, ibinary; 189d0c080abSJoseph Pusztay 190d0c080abSJoseph Pusztay PetscFunctionBegin; 191064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5); 1929566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 1939566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &ibinary)); 1949566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(viewer, vf->format)); 195d0c080abSJoseph Pusztay if (iascii) { 1969566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel)); 197d0c080abSJoseph Pusztay if (step == -1) { /* this indicates it is an interpolated solution */ 19863a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "Interpolated solution at time %g between steps %" PetscInt_FMT " and %" PetscInt_FMT "\n", (double)ptime, ts->steps - 1, ts->steps)); 199d0c080abSJoseph Pusztay } else { 20063a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)\n" : "\n")); 201d0c080abSJoseph Pusztay } 2029566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel)); 203d0c080abSJoseph Pusztay } else if (ibinary) { 204d0c080abSJoseph Pusztay PetscMPIInt rank; 2059566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)viewer), &rank)); 206c5853193SPierre Jolivet if (rank == 0) { 207d0c080abSJoseph Pusztay PetscBool skipHeader; 208d0c080abSJoseph Pusztay PetscInt classid = REAL_FILE_CLASSID; 209d0c080abSJoseph Pusztay 2109566063dSJacob Faibussowitsch PetscCall(PetscViewerBinaryGetSkipHeader(viewer, &skipHeader)); 21148a46eb9SPierre Jolivet if (!skipHeader) PetscCall(PetscViewerBinaryWrite(viewer, &classid, 1, PETSC_INT)); 2129566063dSJacob Faibussowitsch PetscCall(PetscRealView(1, &ptime, viewer)); 213d0c080abSJoseph Pusztay } else { 2149566063dSJacob Faibussowitsch PetscCall(PetscRealView(0, &ptime, viewer)); 215d0c080abSJoseph Pusztay } 216d0c080abSJoseph Pusztay } 2179566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(viewer)); 218d0c080abSJoseph Pusztay PetscFunctionReturn(0); 219d0c080abSJoseph Pusztay } 220d0c080abSJoseph Pusztay 221d0c080abSJoseph Pusztay /*@C 222d0c080abSJoseph Pusztay TSMonitorExtreme - Prints the extreme values of the solution at each timestep 223d0c080abSJoseph Pusztay 224bcf0153eSBarry Smith Level: intermediate 225bcf0153eSBarry Smith 2263a61192cSBarry Smith Notes: 2273a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 2283a61192cSBarry Smith to be used during the TS integration. 2293a61192cSBarry Smith 230bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()` 231d0c080abSJoseph Pusztay @*/ 232d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorExtreme(TS ts, PetscInt step, PetscReal ptime, Vec v, PetscViewerAndFormat *vf) 233d71ae5a4SJacob Faibussowitsch { 234d0c080abSJoseph Pusztay PetscViewer viewer = vf->viewer; 235d0c080abSJoseph Pusztay PetscBool iascii; 236d0c080abSJoseph Pusztay PetscReal max, min; 237d0c080abSJoseph Pusztay 238d0c080abSJoseph Pusztay PetscFunctionBegin; 239064a246eSJacob Faibussowitsch PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 5); 2409566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 2419566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(viewer, vf->format)); 242d0c080abSJoseph Pusztay if (iascii) { 2439566063dSJacob Faibussowitsch PetscCall(VecMax(v, NULL, &max)); 2449566063dSJacob Faibussowitsch PetscCall(VecMin(v, NULL, &min)); 2459566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIAddTab(viewer, ((PetscObject)ts)->tablevel)); 24663a3b9bcSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "%" PetscInt_FMT " TS dt %g time %g%s max %g min %g\n", step, (double)ts->time_step, (double)ptime, ts->steprollback ? " (r)" : "", (double)max, (double)min)); 2479566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISubtractTab(viewer, ((PetscObject)ts)->tablevel)); 248d0c080abSJoseph Pusztay } 2499566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(viewer)); 250d0c080abSJoseph Pusztay PetscFunctionReturn(0); 251d0c080abSJoseph Pusztay } 252d0c080abSJoseph Pusztay 253d0c080abSJoseph Pusztay /*@C 254bcf0153eSBarry Smith TSMonitorLGCtxCreate - Creates a `TSMonitorLGCtx` context for use with 255bcf0153eSBarry Smith `TS` to monitor the solution process graphically in various ways 256d0c080abSJoseph Pusztay 257bcf0153eSBarry Smith Collective on ts 258d0c080abSJoseph Pusztay 259d0c080abSJoseph Pusztay Input Parameters: 260d0c080abSJoseph Pusztay + host - the X display to open, or null for the local machine 261d0c080abSJoseph Pusztay . label - the title to put in the title bar 262d0c080abSJoseph Pusztay . x, y - the screen coordinates of the upper left coordinate of the window 263d0c080abSJoseph Pusztay . m, n - the screen width and height in pixels 264d0c080abSJoseph Pusztay - howoften - if positive then determines the frequency of the plotting, if -1 then only at the final time 265d0c080abSJoseph Pusztay 266d0c080abSJoseph Pusztay Output Parameter: 267d0c080abSJoseph Pusztay . ctx - the context 268d0c080abSJoseph Pusztay 269bcf0153eSBarry Smith Options Database Keys: 270d0c080abSJoseph Pusztay + -ts_monitor_lg_timestep - automatically sets line graph monitor 271d0c080abSJoseph Pusztay + -ts_monitor_lg_timestep_log - automatically sets line graph monitor 272bcf0153eSBarry Smith . -ts_monitor_lg_solution - monitor the solution (or certain values of the solution by calling `TSMonitorLGSetDisplayVariables()` or `TSMonitorLGCtxSetDisplayVariables()`) 273d0c080abSJoseph Pusztay . -ts_monitor_lg_error - monitor the error 274bcf0153eSBarry Smith . -ts_monitor_lg_ksp_iterations - monitor the number of `KSP` iterations needed for each timestep 275bcf0153eSBarry Smith . -ts_monitor_lg_snes_iterations - monitor the number of `SNES` iterations needed for each timestep 276d0c080abSJoseph Pusztay - -lg_use_markers <true,false> - mark the data points (at each time step) on the plot; default is true 277d0c080abSJoseph Pusztay 278d0c080abSJoseph Pusztay Level: intermediate 279d0c080abSJoseph Pusztay 280bcf0153eSBarry Smith Notes: 281bcf0153eSBarry Smith Pass the context and `TSMonitorLGCtxDestroy()` to `TSMonitorSet()` to have the context destroyed when no longer needed. 282bcf0153eSBarry Smith 283bcf0153eSBarry Smith One can provide a function that transforms the solution before plotting it with `TSMonitorLGCtxSetTransform()` or `TSMonitorLGSetTransform()` 284bcf0153eSBarry Smith 285bcf0153eSBarry Smith Many of the functions that control the monitoring have two forms: TSMonitorLGSet/GetXXXX() and TSMonitorLGCtxSet/GetXXXX() the first take a `TS` object as the 286bcf0153eSBarry Smith first argument (if that `TS` object does not have a `TSMonitorLGCtx` associated with it the function call is ignored) and the second takes a `TSMonitorLGCtx` object 287bcf0153eSBarry Smith as the first argument. 288bcf0153eSBarry Smith 289bcf0153eSBarry Smith One can control the names displayed for each solution or error variable with `TSMonitorLGCtxSetVariableNames()` or `TSMonitorLGSetVariableNames()` 290bcf0153eSBarry Smith 291bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()`, `TSMonitorDefault()`, `VecView()`, 292db781477SPatrick Sanan `TSMonitorLGCtxCreate()`, `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`, 293db781477SPatrick Sanan `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`, 294db781477SPatrick Sanan `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGError()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`, 295db781477SPatrick Sanan `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()` 296d0c080abSJoseph Pusztay @*/ 297d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorLGCtx *ctx) 298d71ae5a4SJacob Faibussowitsch { 299d0c080abSJoseph Pusztay PetscDraw draw; 300d0c080abSJoseph Pusztay 301d0c080abSJoseph Pusztay PetscFunctionBegin; 3029566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 3039566063dSJacob Faibussowitsch PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw)); 3049566063dSJacob Faibussowitsch PetscCall(PetscDrawSetFromOptions(draw)); 3059566063dSJacob Faibussowitsch PetscCall(PetscDrawLGCreate(draw, 1, &(*ctx)->lg)); 3069566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetFromOptions((*ctx)->lg)); 3079566063dSJacob Faibussowitsch PetscCall(PetscDrawDestroy(&draw)); 308d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 309d0c080abSJoseph Pusztay PetscFunctionReturn(0); 310d0c080abSJoseph Pusztay } 311d0c080abSJoseph Pusztay 312d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGTimeStep(TS ts, PetscInt step, PetscReal ptime, Vec v, void *monctx) 313d71ae5a4SJacob Faibussowitsch { 314d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 315d0c080abSJoseph Pusztay PetscReal x = ptime, y; 316d0c080abSJoseph Pusztay 317d0c080abSJoseph Pusztay PetscFunctionBegin; 318d0c080abSJoseph Pusztay if (step < 0) PetscFunctionReturn(0); /* -1 indicates an interpolated solution */ 319d0c080abSJoseph Pusztay if (!step) { 320d0c080abSJoseph Pusztay PetscDrawAxis axis; 321d0c080abSJoseph Pusztay const char *ylabel = ctx->semilogy ? "Log Time Step" : "Time Step"; 3229566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 3239566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Timestep as function of time", "Time", ylabel)); 3249566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 325d0c080abSJoseph Pusztay } 3269566063dSJacob Faibussowitsch PetscCall(TSGetTimeStep(ts, &y)); 327d0c080abSJoseph Pusztay if (ctx->semilogy) y = PetscLog10Real(y); 3289566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 329d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 3309566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 3319566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 332d0c080abSJoseph Pusztay } 333d0c080abSJoseph Pusztay PetscFunctionReturn(0); 334d0c080abSJoseph Pusztay } 335d0c080abSJoseph Pusztay 336d0c080abSJoseph Pusztay /*@C 337d0c080abSJoseph Pusztay TSMonitorLGCtxDestroy - Destroys a line graph context that was created 338bcf0153eSBarry Smith with `TSMonitorLGCtxCreate()`. 339d0c080abSJoseph Pusztay 340bcf0153eSBarry Smith Collective on ctx 341d0c080abSJoseph Pusztay 342d0c080abSJoseph Pusztay Input Parameter: 343d0c080abSJoseph Pusztay . ctx - the monitor context 344d0c080abSJoseph Pusztay 345d0c080abSJoseph Pusztay Level: intermediate 346d0c080abSJoseph Pusztay 347bcf0153eSBarry Smith Note: 348bcf0153eSBarry Smith Pass to `TSMonitorSet()` along with the context and `TSMonitorLGTimeStep()` 349bcf0153eSBarry Smith 350bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep();` 351d0c080abSJoseph Pusztay @*/ 352d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxDestroy(TSMonitorLGCtx *ctx) 353d71ae5a4SJacob Faibussowitsch { 354d0c080abSJoseph Pusztay PetscFunctionBegin; 35548a46eb9SPierre Jolivet if ((*ctx)->transformdestroy) PetscCall(((*ctx)->transformdestroy)((*ctx)->transformctx)); 3569566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDestroy(&(*ctx)->lg)); 3579566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&(*ctx)->names)); 3589566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&(*ctx)->displaynames)); 3599566063dSJacob Faibussowitsch PetscCall(PetscFree((*ctx)->displayvariables)); 3609566063dSJacob Faibussowitsch PetscCall(PetscFree((*ctx)->displayvalues)); 3619566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 362d0c080abSJoseph Pusztay PetscFunctionReturn(0); 363d0c080abSJoseph Pusztay } 364d0c080abSJoseph Pusztay 365d7462660SMatthew Knepley /* Creates a TS Monitor SPCtx for use with DMSwarm particle visualizations */ 366d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, PetscInt retain, PetscBool phase, TSMonitorSPCtx *ctx) 367d71ae5a4SJacob Faibussowitsch { 368d0c080abSJoseph Pusztay PetscDraw draw; 369d0c080abSJoseph Pusztay 370d0c080abSJoseph Pusztay PetscFunctionBegin; 3719566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 3729566063dSJacob Faibussowitsch PetscCall(PetscDrawCreate(comm, host, label, x, y, m, n, &draw)); 3739566063dSJacob Faibussowitsch PetscCall(PetscDrawSetFromOptions(draw)); 3749566063dSJacob Faibussowitsch PetscCall(PetscDrawSPCreate(draw, 1, &(*ctx)->sp)); 3759566063dSJacob Faibussowitsch PetscCall(PetscDrawDestroy(&draw)); 376d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 377d7462660SMatthew Knepley (*ctx)->retain = retain; 378d7462660SMatthew Knepley (*ctx)->phase = phase; 379d0c080abSJoseph Pusztay PetscFunctionReturn(0); 380d0c080abSJoseph Pusztay } 381d0c080abSJoseph Pusztay 382d0c080abSJoseph Pusztay /* 383d0c080abSJoseph Pusztay Destroys a TSMonitorSPCtx that was created with TSMonitorSPCtxCreate 384d0c080abSJoseph Pusztay */ 385d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPCtxDestroy(TSMonitorSPCtx *ctx) 386d71ae5a4SJacob Faibussowitsch { 387d0c080abSJoseph Pusztay PetscFunctionBegin; 388d0c080abSJoseph Pusztay 3899566063dSJacob Faibussowitsch PetscCall(PetscDrawSPDestroy(&(*ctx)->sp)); 3909566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 391d0c080abSJoseph Pusztay 392d0c080abSJoseph Pusztay PetscFunctionReturn(0); 393d0c080abSJoseph Pusztay } 394d0c080abSJoseph Pusztay 395d0c080abSJoseph Pusztay /*@C 396bcf0153eSBarry Smith TSMonitorDrawSolution - Monitors progress of the `TS` solvers by calling 397bcf0153eSBarry Smith `VecView()` for the solution at each timestep 398d0c080abSJoseph Pusztay 399bcf0153eSBarry Smith Collective on ts 400d0c080abSJoseph Pusztay 401d0c080abSJoseph Pusztay Input Parameters: 402bcf0153eSBarry Smith + ts - the `TS` context 403d0c080abSJoseph Pusztay . step - current time-step 404d0c080abSJoseph Pusztay . ptime - current time 405d0c080abSJoseph Pusztay - dummy - either a viewer or NULL 406d0c080abSJoseph Pusztay 407bcf0153eSBarry Smith Options Database Keys: 408bcf0153eSBarry Smith + -ts_monitor_draw_solution - draw the solution at each time-step 409bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution 410bcf0153eSBarry Smith 411bcf0153eSBarry Smith Level: intermediate 412d0c080abSJoseph Pusztay 413d0c080abSJoseph Pusztay Notes: 4143a61192cSBarry Smith The initial solution and current solution are not displayed with a common axis scaling so generally the option -ts_monitor_draw_solution_initial 415d0c080abSJoseph Pusztay will look bad 416d0c080abSJoseph Pusztay 417bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, as well as the context created with 418bcf0153eSBarry Smith `TSMonitorDrawCtxCreate()` and the function `TSMonitorDrawCtxDestroy()` to cause the monitor to be used during the `TS` integration. 4193a61192cSBarry Smith 420bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtxCreate()`, `TSMonitorDrawCtxDestroy()` 421d0c080abSJoseph Pusztay @*/ 422d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 423d71ae5a4SJacob Faibussowitsch { 424d0c080abSJoseph Pusztay TSMonitorDrawCtx ictx = (TSMonitorDrawCtx)dummy; 425d0c080abSJoseph Pusztay PetscDraw draw; 426d0c080abSJoseph Pusztay 427d0c080abSJoseph Pusztay PetscFunctionBegin; 428d0c080abSJoseph Pusztay if (!step && ictx->showinitial) { 42948a46eb9SPierre Jolivet if (!ictx->initialsolution) PetscCall(VecDuplicate(u, &ictx->initialsolution)); 4309566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ictx->initialsolution)); 431d0c080abSJoseph Pusztay } 432d0c080abSJoseph Pusztay if (!(((ictx->howoften > 0) && (!(step % ictx->howoften))) || ((ictx->howoften == -1) && ts->reason))) PetscFunctionReturn(0); 433d0c080abSJoseph Pusztay 434d0c080abSJoseph Pusztay if (ictx->showinitial) { 435d0c080abSJoseph Pusztay PetscReal pause; 4369566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetPause(ictx->viewer, &pause)); 4379566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetPause(ictx->viewer, 0.0)); 4389566063dSJacob Faibussowitsch PetscCall(VecView(ictx->initialsolution, ictx->viewer)); 4399566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetPause(ictx->viewer, pause)); 4409566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_TRUE)); 441d0c080abSJoseph Pusztay } 4429566063dSJacob Faibussowitsch PetscCall(VecView(u, ictx->viewer)); 443d0c080abSJoseph Pusztay if (ictx->showtimestepandtime) { 444d0c080abSJoseph Pusztay PetscReal xl, yl, xr, yr, h; 445d0c080abSJoseph Pusztay char time[32]; 446d0c080abSJoseph Pusztay 4479566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw)); 4489566063dSJacob Faibussowitsch PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime)); 4499566063dSJacob Faibussowitsch PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr)); 450d0c080abSJoseph Pusztay h = yl + .95 * (yr - yl); 4519566063dSJacob Faibussowitsch PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time)); 4529566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 453d0c080abSJoseph Pusztay } 454d0c080abSJoseph Pusztay 4551baa6e33SBarry Smith if (ictx->showinitial) PetscCall(PetscViewerDrawSetHold(ictx->viewer, PETSC_FALSE)); 456d0c080abSJoseph Pusztay PetscFunctionReturn(0); 457d0c080abSJoseph Pusztay } 458d0c080abSJoseph Pusztay 459d0c080abSJoseph Pusztay /*@C 460bcf0153eSBarry Smith TSMonitorDrawSolutionPhase - Monitors progress of the `TS` solvers by plotting the solution as a phase diagram 461d0c080abSJoseph Pusztay 462bcf0153eSBarry Smith Collective on ts 463d0c080abSJoseph Pusztay 464d0c080abSJoseph Pusztay Input Parameters: 465bcf0153eSBarry Smith + ts - the `TS` context 466d0c080abSJoseph Pusztay . step - current time-step 467d0c080abSJoseph Pusztay . ptime - current time 468d0c080abSJoseph Pusztay - dummy - either a viewer or NULL 469d0c080abSJoseph Pusztay 470d0c080abSJoseph Pusztay Level: intermediate 471d0c080abSJoseph Pusztay 472bcf0153eSBarry Smith Notes: 473bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 474bcf0153eSBarry Smith to be used during the `TS` integration. 475bcf0153eSBarry Smith 476bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 477d0c080abSJoseph Pusztay @*/ 478d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionPhase(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 479d71ae5a4SJacob Faibussowitsch { 480d0c080abSJoseph Pusztay TSMonitorDrawCtx ictx = (TSMonitorDrawCtx)dummy; 481d0c080abSJoseph Pusztay PetscDraw draw; 482d0c080abSJoseph Pusztay PetscDrawAxis axis; 483d0c080abSJoseph Pusztay PetscInt n; 484d0c080abSJoseph Pusztay PetscMPIInt size; 485d0c080abSJoseph Pusztay PetscReal U0, U1, xl, yl, xr, yr, h; 486d0c080abSJoseph Pusztay char time[32]; 487d0c080abSJoseph Pusztay const PetscScalar *U; 488d0c080abSJoseph Pusztay 489d0c080abSJoseph Pusztay PetscFunctionBegin; 4909566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)ts), &size)); 4913c633725SBarry Smith PetscCheck(size == 1, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only allowed for sequential runs"); 4929566063dSJacob Faibussowitsch PetscCall(VecGetSize(u, &n)); 4933c633725SBarry Smith PetscCheck(n == 2, PetscObjectComm((PetscObject)ts), PETSC_ERR_SUP, "Only for ODEs with two unknowns"); 494d0c080abSJoseph Pusztay 4959566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(ictx->viewer, 0, &draw)); 4969566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDrawAxis(ictx->viewer, 0, &axis)); 4979566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisGetLimits(axis, &xl, &xr, &yl, &yr)); 498d0c080abSJoseph Pusztay if (!step) { 4999566063dSJacob Faibussowitsch PetscCall(PetscDrawClear(draw)); 5009566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisDraw(axis)); 501d0c080abSJoseph Pusztay } 502d0c080abSJoseph Pusztay 5039566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(u, &U)); 504d0c080abSJoseph Pusztay U0 = PetscRealPart(U[0]); 505d0c080abSJoseph Pusztay U1 = PetscRealPart(U[1]); 5069566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(u, &U)); 507d0c080abSJoseph Pusztay if ((U0 < xl) || (U1 < yl) || (U0 > xr) || (U1 > yr)) PetscFunctionReturn(0); 508d0c080abSJoseph Pusztay 509d0609cedSBarry Smith PetscDrawCollectiveBegin(draw); 5109566063dSJacob Faibussowitsch PetscCall(PetscDrawPoint(draw, U0, U1, PETSC_DRAW_BLACK)); 511d0c080abSJoseph Pusztay if (ictx->showtimestepandtime) { 5129566063dSJacob Faibussowitsch PetscCall(PetscDrawGetCoordinates(draw, &xl, &yl, &xr, &yr)); 5139566063dSJacob Faibussowitsch PetscCall(PetscSNPrintf(time, 32, "Timestep %d Time %g", (int)step, (double)ptime)); 514d0c080abSJoseph Pusztay h = yl + .95 * (yr - yl); 5159566063dSJacob Faibussowitsch PetscCall(PetscDrawStringCentered(draw, .5 * (xl + xr), h, PETSC_DRAW_BLACK, time)); 516d0c080abSJoseph Pusztay } 517d0609cedSBarry Smith PetscDrawCollectiveEnd(draw); 5189566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 5199566063dSJacob Faibussowitsch PetscCall(PetscDrawPause(draw)); 5209566063dSJacob Faibussowitsch PetscCall(PetscDrawSave(draw)); 521d0c080abSJoseph Pusztay PetscFunctionReturn(0); 522d0c080abSJoseph Pusztay } 523d0c080abSJoseph Pusztay 524d0c080abSJoseph Pusztay /*@C 525bcf0153eSBarry Smith TSMonitorDrawCtxDestroy - Destroys the monitor context for `TSMonitorDrawSolution()` 526d0c080abSJoseph Pusztay 527bcf0153eSBarry Smith Collective on ts 528d0c080abSJoseph Pusztay 529d0c080abSJoseph Pusztay Input Parameters: 530d0c080abSJoseph Pusztay . ctx - the monitor context 531d0c080abSJoseph Pusztay 532d0c080abSJoseph Pusztay Level: intermediate 533d0c080abSJoseph Pusztay 534bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawSolution()`, `TSMonitorDrawError()`, `TSMonitorDrawCtx` 535d0c080abSJoseph Pusztay @*/ 536d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxDestroy(TSMonitorDrawCtx *ictx) 537d71ae5a4SJacob Faibussowitsch { 538d0c080abSJoseph Pusztay PetscFunctionBegin; 5399566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&(*ictx)->viewer)); 5409566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ictx)->initialsolution)); 5419566063dSJacob Faibussowitsch PetscCall(PetscFree(*ictx)); 542d0c080abSJoseph Pusztay PetscFunctionReturn(0); 543d0c080abSJoseph Pusztay } 544d0c080abSJoseph Pusztay 545d0c080abSJoseph Pusztay /*@C 546bcf0153eSBarry Smith TSMonitorDrawCtxCreate - Creates the monitor context for `TSMonitorDrawCtx` 547d0c080abSJoseph Pusztay 548bcf0153eSBarry Smith Collective on ts 549d0c080abSJoseph Pusztay 550d0c080abSJoseph Pusztay Input Parameter: 551d0c080abSJoseph Pusztay . ts - time-step context 552d0c080abSJoseph Pusztay 553*d5b43468SJose E. Roman Output Parameter: 554d0c080abSJoseph Pusztay . ctx - the monitor context 555d0c080abSJoseph Pusztay 556bcf0153eSBarry Smith Options Database Keys: 557bcf0153eSBarry Smith + -ts_monitor_draw_solution - draw the solution at each time-step 558bcf0153eSBarry Smith - -ts_monitor_draw_solution_initial - show initial solution as well as current solution 559d0c080abSJoseph Pusztay 560d0c080abSJoseph Pusztay Level: intermediate 561d0c080abSJoseph Pusztay 562bcf0153eSBarry Smith Note: 563bcf0153eSBarry Smith The context created by this function, `PetscMonitorDrawSolution()`, and `TSMonitorDrawCtxDestroy()` should be passed together to `TSMonitorSet()`. 564bcf0153eSBarry Smith 565bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorDrawCtxDestroy()`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorDrawCtx`, `PetscMonitorDrawSolution()` 566d0c080abSJoseph Pusztay @*/ 567d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawCtxCreate(MPI_Comm comm, const char host[], const char label[], int x, int y, int m, int n, PetscInt howoften, TSMonitorDrawCtx *ctx) 568d71ae5a4SJacob Faibussowitsch { 569d0c080abSJoseph Pusztay PetscFunctionBegin; 5709566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 5719566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawOpen(comm, host, label, x, y, m, n, &(*ctx)->viewer)); 5729566063dSJacob Faibussowitsch PetscCall(PetscViewerSetFromOptions((*ctx)->viewer)); 573d0c080abSJoseph Pusztay 574d0c080abSJoseph Pusztay (*ctx)->howoften = howoften; 575d0c080abSJoseph Pusztay (*ctx)->showinitial = PETSC_FALSE; 5769566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_initial", &(*ctx)->showinitial, NULL)); 577d0c080abSJoseph Pusztay 578d0c080abSJoseph Pusztay (*ctx)->showtimestepandtime = PETSC_FALSE; 5799566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(NULL, NULL, "-ts_monitor_draw_solution_show_time", &(*ctx)->showtimestepandtime, NULL)); 580d0c080abSJoseph Pusztay PetscFunctionReturn(0); 581d0c080abSJoseph Pusztay } 582d0c080abSJoseph Pusztay 583d0c080abSJoseph Pusztay /*@C 584bcf0153eSBarry Smith TSMonitorDrawSolutionFunction - Monitors progress of the `TS` solvers by calling 585bcf0153eSBarry Smith `VecView()` for the solution provided by `TSSetSolutionFunction()` at each timestep 586d0c080abSJoseph Pusztay 587bcf0153eSBarry Smith Collective on ts 588d0c080abSJoseph Pusztay 589d0c080abSJoseph Pusztay Input Parameters: 590bcf0153eSBarry Smith + ts - the `TS` context 591d0c080abSJoseph Pusztay . step - current time-step 592d0c080abSJoseph Pusztay . ptime - current time 593d0c080abSJoseph Pusztay - dummy - either a viewer or NULL 594d0c080abSJoseph Pusztay 595bcf0153eSBarry Smith Options Database Key: 596bcf0153eSBarry Smith . -ts_monitor_draw_solution_function - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()` 5973a61192cSBarry Smith 598d0c080abSJoseph Pusztay Level: intermediate 599d0c080abSJoseph Pusztay 600bcf0153eSBarry Smith Note: 601bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 602bcf0153eSBarry Smith to be used during the `TS` integration. 603bcf0153eSBarry Smith 604bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 605d0c080abSJoseph Pusztay @*/ 606d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawSolutionFunction(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 607d71ae5a4SJacob Faibussowitsch { 608d0c080abSJoseph Pusztay TSMonitorDrawCtx ctx = (TSMonitorDrawCtx)dummy; 609d0c080abSJoseph Pusztay PetscViewer viewer = ctx->viewer; 610d0c080abSJoseph Pusztay Vec work; 611d0c080abSJoseph Pusztay 612d0c080abSJoseph Pusztay PetscFunctionBegin; 613d0c080abSJoseph Pusztay if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(0); 6149566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &work)); 6159566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, work)); 6169566063dSJacob Faibussowitsch PetscCall(VecView(work, viewer)); 6179566063dSJacob Faibussowitsch PetscCall(VecDestroy(&work)); 618d0c080abSJoseph Pusztay PetscFunctionReturn(0); 619d0c080abSJoseph Pusztay } 620d0c080abSJoseph Pusztay 621d0c080abSJoseph Pusztay /*@C 622bcf0153eSBarry Smith TSMonitorDrawError - Monitors progress of the `TS` solvers by calling 623bcf0153eSBarry Smith `VecView()` for the error at each timestep 624d0c080abSJoseph Pusztay 625bcf0153eSBarry Smith Collective on ts 626d0c080abSJoseph Pusztay 627d0c080abSJoseph Pusztay Input Parameters: 628bcf0153eSBarry Smith + ts - the `TS` context 629d0c080abSJoseph Pusztay . step - current time-step 630d0c080abSJoseph Pusztay . ptime - current time 631d0c080abSJoseph Pusztay - dummy - either a viewer or NULL 632d0c080abSJoseph Pusztay 633bcf0153eSBarry Smith Options Database Key: 634bcf0153eSBarry Smith . -ts_monitor_draw_error - Monitor error graphically, requires user to have provided `TSSetSolutionFunction()` 6353a61192cSBarry Smith 636d0c080abSJoseph Pusztay Level: intermediate 637d0c080abSJoseph Pusztay 638bcf0153eSBarry Smith Notes: 639bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 640bcf0153eSBarry Smith to be used during the `TS` integration. 641bcf0153eSBarry Smith 642bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 643d0c080abSJoseph Pusztay @*/ 644d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorDrawError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 645d71ae5a4SJacob Faibussowitsch { 646d0c080abSJoseph Pusztay TSMonitorDrawCtx ctx = (TSMonitorDrawCtx)dummy; 647d0c080abSJoseph Pusztay PetscViewer viewer = ctx->viewer; 648d0c080abSJoseph Pusztay Vec work; 649d0c080abSJoseph Pusztay 650d0c080abSJoseph Pusztay PetscFunctionBegin; 651d0c080abSJoseph Pusztay if (!(((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason))) PetscFunctionReturn(0); 6529566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &work)); 6539566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, work)); 6549566063dSJacob Faibussowitsch PetscCall(VecAXPY(work, -1.0, u)); 6559566063dSJacob Faibussowitsch PetscCall(VecView(work, viewer)); 6569566063dSJacob Faibussowitsch PetscCall(VecDestroy(&work)); 657d0c080abSJoseph Pusztay PetscFunctionReturn(0); 658d0c080abSJoseph Pusztay } 659d0c080abSJoseph Pusztay 660d0c080abSJoseph Pusztay /*@C 661bcf0153eSBarry Smith TSMonitorSolution - Monitors progress of the TS solvers by `VecView()` for the solution at each timestep. Normally the viewer is a binary file or a `PetscDraw` object 662d0c080abSJoseph Pusztay 663bcf0153eSBarry Smith Collective on ts 664d0c080abSJoseph Pusztay 665d0c080abSJoseph Pusztay Input Parameters: 666bcf0153eSBarry Smith + ts - the `TS` context 667d0c080abSJoseph Pusztay . step - current time-step 668d0c080abSJoseph Pusztay . ptime - current time 669d0c080abSJoseph Pusztay . u - current state 670d0c080abSJoseph Pusztay - vf - viewer and its format 671d0c080abSJoseph Pusztay 672d0c080abSJoseph Pusztay Level: intermediate 673d0c080abSJoseph Pusztay 674bcf0153eSBarry Smith Notes: 675bcf0153eSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 676bcf0153eSBarry Smith to be used during the `TS` integration. 677bcf0153eSBarry Smith 678bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 679d0c080abSJoseph Pusztay @*/ 680d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf) 681d71ae5a4SJacob Faibussowitsch { 682d0c080abSJoseph Pusztay PetscFunctionBegin; 6839566063dSJacob Faibussowitsch PetscCall(PetscViewerPushFormat(vf->viewer, vf->format)); 6849566063dSJacob Faibussowitsch PetscCall(VecView(u, vf->viewer)); 6859566063dSJacob Faibussowitsch PetscCall(PetscViewerPopFormat(vf->viewer)); 686d0c080abSJoseph Pusztay PetscFunctionReturn(0); 687d0c080abSJoseph Pusztay } 688d0c080abSJoseph Pusztay 689d0c080abSJoseph Pusztay /*@C 690bcf0153eSBarry Smith TSMonitorSolutionVTK - Monitors progress of the `TS` solvers by `VecView()` for the solution at each timestep. 691d0c080abSJoseph Pusztay 692bcf0153eSBarry Smith Collective on ts 693d0c080abSJoseph Pusztay 694d0c080abSJoseph Pusztay Input Parameters: 695bcf0153eSBarry Smith + ts - the `TS` context 696d0c080abSJoseph Pusztay . step - current time-step 697d0c080abSJoseph Pusztay . ptime - current time 698d0c080abSJoseph Pusztay . u - current state 69963a3b9bcSJacob Faibussowitsch - filenametemplate - string containing a format specifier for the integer time step (e.g. %03" PetscInt_FMT ") 700d0c080abSJoseph Pusztay 701d0c080abSJoseph Pusztay Level: intermediate 702d0c080abSJoseph Pusztay 703d0c080abSJoseph Pusztay Notes: 704d0c080abSJoseph Pusztay The VTK format does not allow writing multiple time steps in the same file, therefore a different file will be written for each time step. 705d0c080abSJoseph Pusztay These are named according to the file name template. 706d0c080abSJoseph Pusztay 7073a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 708bcf0153eSBarry Smith to be used during the `TS` integration. 709d0c080abSJoseph Pusztay 710bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()` 711d0c080abSJoseph Pusztay @*/ 712d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolutionVTK(TS ts, PetscInt step, PetscReal ptime, Vec u, void *filenametemplate) 713d71ae5a4SJacob Faibussowitsch { 714d0c080abSJoseph Pusztay char filename[PETSC_MAX_PATH_LEN]; 715d0c080abSJoseph Pusztay PetscViewer viewer; 716d0c080abSJoseph Pusztay 717d0c080abSJoseph Pusztay PetscFunctionBegin; 718d0c080abSJoseph Pusztay if (step < 0) PetscFunctionReturn(0); /* -1 indicates interpolated solution */ 7199566063dSJacob Faibussowitsch PetscCall(PetscSNPrintf(filename, sizeof(filename), (const char *)filenametemplate, step)); 7209566063dSJacob Faibussowitsch PetscCall(PetscViewerVTKOpen(PetscObjectComm((PetscObject)ts), filename, FILE_MODE_WRITE, &viewer)); 7219566063dSJacob Faibussowitsch PetscCall(VecView(u, viewer)); 7229566063dSJacob Faibussowitsch PetscCall(PetscViewerDestroy(&viewer)); 723d0c080abSJoseph Pusztay PetscFunctionReturn(0); 724d0c080abSJoseph Pusztay } 725d0c080abSJoseph Pusztay 726d0c080abSJoseph Pusztay /*@C 727bcf0153eSBarry Smith TSMonitorSolutionVTKDestroy - Destroy filename template string created for use with `TSMonitorSolutionVTK()` 728d0c080abSJoseph Pusztay 729bcf0153eSBarry Smith Not Collective 730d0c080abSJoseph Pusztay 731d0c080abSJoseph Pusztay Input Parameters: 73263a3b9bcSJacob Faibussowitsch . filenametemplate - string containing a format specifier for the integer time step (e.g. %03" PetscInt_FMT ") 733d0c080abSJoseph Pusztay 734d0c080abSJoseph Pusztay Level: intermediate 735d0c080abSJoseph Pusztay 736d0c080abSJoseph Pusztay Note: 737bcf0153eSBarry Smith This function is normally passed to `TSMonitorSet()` along with `TSMonitorSolutionVTK()`. 738d0c080abSJoseph Pusztay 739bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorSet()`, `TSMonitorSolutionVTK()` 740d0c080abSJoseph Pusztay @*/ 741d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSolutionVTKDestroy(void *filenametemplate) 742d71ae5a4SJacob Faibussowitsch { 743d0c080abSJoseph Pusztay PetscFunctionBegin; 7449566063dSJacob Faibussowitsch PetscCall(PetscFree(*(char **)filenametemplate)); 745d0c080abSJoseph Pusztay PetscFunctionReturn(0); 746d0c080abSJoseph Pusztay } 747d0c080abSJoseph Pusztay 748d0c080abSJoseph Pusztay /*@C 749bcf0153eSBarry Smith TSMonitorLGSolution - Monitors progress of the `TS` solvers by plotting each component of the solution vector 750d0c080abSJoseph Pusztay in a time based line graph 751d0c080abSJoseph Pusztay 752bcf0153eSBarry Smith Collective on ts 753d0c080abSJoseph Pusztay 754d0c080abSJoseph Pusztay Input Parameters: 755bcf0153eSBarry Smith + ts - the `TS` context 756d0c080abSJoseph Pusztay . step - current time-step 757d0c080abSJoseph Pusztay . ptime - current time 758d0c080abSJoseph Pusztay . u - current solution 759bcf0153eSBarry Smith - dctx - the `TSMonitorLGCtx` object that contains all the options for the monitoring, this is created with `TSMonitorLGCtxCreate()` 760d0c080abSJoseph Pusztay 761bcf0153eSBarry Smith Options Database Key: 76267b8a455SSatish Balay . -ts_monitor_lg_solution_variables - enable monitor of lg solution variables 763d0c080abSJoseph Pusztay 764d0c080abSJoseph Pusztay Level: intermediate 765d0c080abSJoseph Pusztay 766d0c080abSJoseph Pusztay Notes: 767d0c080abSJoseph Pusztay Each process in a parallel run displays its component solutions in a separate window 768d0c080abSJoseph Pusztay 7693a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 770bcf0153eSBarry Smith to be used during the `TS` integration. 7713a61192cSBarry Smith 772bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGCtxCreate()`, `TSMonitorLGCtxSetVariableNames()`, `TSMonitorLGCtxGetVariableNames()`, 773db781477SPatrick Sanan `TSMonitorLGSetVariableNames()`, `TSMonitorLGGetVariableNames()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetDisplayVariables()`, 774db781477SPatrick Sanan `TSMonitorLGCtxSetTransform()`, `TSMonitorLGSetTransform()`, `TSMonitorLGError()`, `TSMonitorLGSNESIterations()`, `TSMonitorLGKSPIterations()`, 775db781477SPatrick Sanan `TSMonitorEnvelopeCtxCreate()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxDestroy()`, `TSMonitorEnvelop()` 776d0c080abSJoseph Pusztay @*/ 777d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 778d71ae5a4SJacob Faibussowitsch { 779d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)dctx; 780d0c080abSJoseph Pusztay const PetscScalar *yy; 781d0c080abSJoseph Pusztay Vec v; 782d0c080abSJoseph Pusztay 783d0c080abSJoseph Pusztay PetscFunctionBegin; 784d0c080abSJoseph Pusztay if (step < 0) PetscFunctionReturn(0); /* -1 indicates interpolated solution */ 785d0c080abSJoseph Pusztay if (!step) { 786d0c080abSJoseph Pusztay PetscDrawAxis axis; 787d0c080abSJoseph Pusztay PetscInt dim; 7889566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 7899566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Solution as function of time", "Time", "Solution")); 790d0c080abSJoseph Pusztay if (!ctx->names) { 791d0c080abSJoseph Pusztay PetscBool flg; 792d0c080abSJoseph Pusztay /* user provides names of variables to plot but no names has been set so assume names are integer values */ 7939566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", &flg)); 794d0c080abSJoseph Pusztay if (flg) { 795d0c080abSJoseph Pusztay PetscInt i, n; 796d0c080abSJoseph Pusztay char **names; 7979566063dSJacob Faibussowitsch PetscCall(VecGetSize(u, &n)); 7989566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &names)); 799d0c080abSJoseph Pusztay for (i = 0; i < n; i++) { 8009566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(5, &names[i])); 80163a3b9bcSJacob Faibussowitsch PetscCall(PetscSNPrintf(names[i], 5, "%" PetscInt_FMT, i)); 802d0c080abSJoseph Pusztay } 803d0c080abSJoseph Pusztay names[n] = NULL; 804d0c080abSJoseph Pusztay ctx->names = names; 805d0c080abSJoseph Pusztay } 806d0c080abSJoseph Pusztay } 807d0c080abSJoseph Pusztay if (ctx->names && !ctx->displaynames) { 808d0c080abSJoseph Pusztay char **displaynames; 809d0c080abSJoseph Pusztay PetscBool flg; 8109566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 8119566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(dim + 1, &displaynames)); 8129566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetStringArray(((PetscObject)ts)->options, ((PetscObject)ts)->prefix, "-ts_monitor_lg_solution_variables", displaynames, &dim, &flg)); 8131baa6e33SBarry Smith if (flg) PetscCall(TSMonitorLGCtxSetDisplayVariables(ctx, (const char *const *)displaynames)); 8149566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&displaynames)); 815d0c080abSJoseph Pusztay } 816d0c080abSJoseph Pusztay if (ctx->displaynames) { 8179566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, ctx->ndisplayvariables)); 8189566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->displaynames)); 819d0c080abSJoseph Pusztay } else if (ctx->names) { 8209566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 8219566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 8229566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetLegend(ctx->lg, (const char *const *)ctx->names)); 823d0c080abSJoseph Pusztay } else { 8249566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 8259566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 826d0c080abSJoseph Pusztay } 8279566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 828d0c080abSJoseph Pusztay } 829d0c080abSJoseph Pusztay 830d0c080abSJoseph Pusztay if (!ctx->transform) v = u; 8319566063dSJacob Faibussowitsch else PetscCall((*ctx->transform)(ctx->transformctx, u, &v)); 8329566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(v, &yy)); 833d0c080abSJoseph Pusztay if (ctx->displaynames) { 834d0c080abSJoseph Pusztay PetscInt i; 8359371c9d4SSatish Balay for (i = 0; i < ctx->ndisplayvariables; i++) ctx->displayvalues[i] = PetscRealPart(yy[ctx->displayvariables[i]]); 8369566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, ctx->displayvalues)); 837d0c080abSJoseph Pusztay } else { 838d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX) 839d0c080abSJoseph Pusztay PetscInt i, n; 840d0c080abSJoseph Pusztay PetscReal *yreal; 8419566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &n)); 8429566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &yreal)); 843d0c080abSJoseph Pusztay for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]); 8449566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal)); 8459566063dSJacob Faibussowitsch PetscCall(PetscFree(yreal)); 846d0c080abSJoseph Pusztay #else 8479566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy)); 848d0c080abSJoseph Pusztay #endif 849d0c080abSJoseph Pusztay } 8509566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(v, &yy)); 8519566063dSJacob Faibussowitsch if (ctx->transform) PetscCall(VecDestroy(&v)); 852d0c080abSJoseph Pusztay 853d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 8549566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 8559566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 856d0c080abSJoseph Pusztay } 857d0c080abSJoseph Pusztay PetscFunctionReturn(0); 858d0c080abSJoseph Pusztay } 859d0c080abSJoseph Pusztay 860d0c080abSJoseph Pusztay /*@C 861d0c080abSJoseph Pusztay TSMonitorLGSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot 862d0c080abSJoseph Pusztay 863bcf0153eSBarry Smith Collective on ts 864d0c080abSJoseph Pusztay 865d0c080abSJoseph Pusztay Input Parameters: 866bcf0153eSBarry Smith + ts - the `TS` context 867d0c080abSJoseph Pusztay - names - the names of the components, final string must be NULL 868d0c080abSJoseph Pusztay 869d0c080abSJoseph Pusztay Level: intermediate 870d0c080abSJoseph Pusztay 871d0c080abSJoseph Pusztay Notes: 872bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 873d0c080abSJoseph Pusztay 874bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGCtxSetVariableNames()` 875d0c080abSJoseph Pusztay @*/ 876d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetVariableNames(TS ts, const char *const *names) 877d71ae5a4SJacob Faibussowitsch { 878d0c080abSJoseph Pusztay PetscInt i; 879d0c080abSJoseph Pusztay 880d0c080abSJoseph Pusztay PetscFunctionBegin; 881d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 882d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 8839566063dSJacob Faibussowitsch PetscCall(TSMonitorLGCtxSetVariableNames((TSMonitorLGCtx)ts->monitorcontext[i], names)); 884d0c080abSJoseph Pusztay break; 885d0c080abSJoseph Pusztay } 886d0c080abSJoseph Pusztay } 887d0c080abSJoseph Pusztay PetscFunctionReturn(0); 888d0c080abSJoseph Pusztay } 889d0c080abSJoseph Pusztay 890d0c080abSJoseph Pusztay /*@C 891d0c080abSJoseph Pusztay TSMonitorLGCtxSetVariableNames - Sets the name of each component in the solution vector so that it may be displayed in the plot 892d0c080abSJoseph Pusztay 893bcf0153eSBarry Smith Collective on ctx 894d0c080abSJoseph Pusztay 895d0c080abSJoseph Pusztay Input Parameters: 896bcf0153eSBarry Smith + ts - the `TS` context 897d0c080abSJoseph Pusztay - names - the names of the components, final string must be NULL 898d0c080abSJoseph Pusztay 899d0c080abSJoseph Pusztay Level: intermediate 900d0c080abSJoseph Pusztay 901bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()`, `TSMonitorLGSetVariableNames()` 902d0c080abSJoseph Pusztay @*/ 903d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetVariableNames(TSMonitorLGCtx ctx, const char *const *names) 904d71ae5a4SJacob Faibussowitsch { 905d0c080abSJoseph Pusztay PetscFunctionBegin; 9069566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&ctx->names)); 9079566063dSJacob Faibussowitsch PetscCall(PetscStrArrayallocpy(names, &ctx->names)); 908d0c080abSJoseph Pusztay PetscFunctionReturn(0); 909d0c080abSJoseph Pusztay } 910d0c080abSJoseph Pusztay 911d0c080abSJoseph Pusztay /*@C 912d0c080abSJoseph Pusztay TSMonitorLGGetVariableNames - Gets the name of each component in the solution vector so that it may be displayed in the plot 913d0c080abSJoseph Pusztay 914bcf0153eSBarry Smith Collective on ts 915d0c080abSJoseph Pusztay 916d0c080abSJoseph Pusztay Input Parameter: 917bcf0153eSBarry Smith . ts - the `TS` context 918d0c080abSJoseph Pusztay 919d0c080abSJoseph Pusztay Output Parameter: 920d0c080abSJoseph Pusztay . names - the names of the components, final string must be NULL 921d0c080abSJoseph Pusztay 922d0c080abSJoseph Pusztay Level: intermediate 923d0c080abSJoseph Pusztay 924bcf0153eSBarry Smith Note: 925bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 926d0c080abSJoseph Pusztay 927bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()` 928d0c080abSJoseph Pusztay @*/ 929d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGGetVariableNames(TS ts, const char *const **names) 930d71ae5a4SJacob Faibussowitsch { 931d0c080abSJoseph Pusztay PetscInt i; 932d0c080abSJoseph Pusztay 933d0c080abSJoseph Pusztay PetscFunctionBegin; 934d0c080abSJoseph Pusztay *names = NULL; 935d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 936d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 937d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)ts->monitorcontext[i]; 938d0c080abSJoseph Pusztay *names = (const char *const *)ctx->names; 939d0c080abSJoseph Pusztay break; 940d0c080abSJoseph Pusztay } 941d0c080abSJoseph Pusztay } 942d0c080abSJoseph Pusztay PetscFunctionReturn(0); 943d0c080abSJoseph Pusztay } 944d0c080abSJoseph Pusztay 945d0c080abSJoseph Pusztay /*@C 946d0c080abSJoseph Pusztay TSMonitorLGCtxSetDisplayVariables - Sets the variables that are to be display in the monitor 947d0c080abSJoseph Pusztay 948bcf0153eSBarry Smith Collective on ctx 949d0c080abSJoseph Pusztay 950d0c080abSJoseph Pusztay Input Parameters: 951bcf0153eSBarry Smith + ctx - the `TSMonitorLG` context 952d0c080abSJoseph Pusztay - displaynames - the names of the components, final string must be NULL 953d0c080abSJoseph Pusztay 954d0c080abSJoseph Pusztay Level: intermediate 955d0c080abSJoseph Pusztay 956bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()` 957d0c080abSJoseph Pusztay @*/ 958d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetDisplayVariables(TSMonitorLGCtx ctx, const char *const *displaynames) 959d71ae5a4SJacob Faibussowitsch { 960d0c080abSJoseph Pusztay PetscInt j = 0, k; 961d0c080abSJoseph Pusztay 962d0c080abSJoseph Pusztay PetscFunctionBegin; 963d0c080abSJoseph Pusztay if (!ctx->names) PetscFunctionReturn(0); 9649566063dSJacob Faibussowitsch PetscCall(PetscStrArrayDestroy(&ctx->displaynames)); 9659566063dSJacob Faibussowitsch PetscCall(PetscStrArrayallocpy(displaynames, &ctx->displaynames)); 966d0c080abSJoseph Pusztay while (displaynames[j]) j++; 967d0c080abSJoseph Pusztay ctx->ndisplayvariables = j; 9689566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvariables)); 9699566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ctx->ndisplayvariables, &ctx->displayvalues)); 970d0c080abSJoseph Pusztay j = 0; 971d0c080abSJoseph Pusztay while (displaynames[j]) { 972d0c080abSJoseph Pusztay k = 0; 973d0c080abSJoseph Pusztay while (ctx->names[k]) { 974d0c080abSJoseph Pusztay PetscBool flg; 9759566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(displaynames[j], ctx->names[k], &flg)); 976d0c080abSJoseph Pusztay if (flg) { 977d0c080abSJoseph Pusztay ctx->displayvariables[j] = k; 978d0c080abSJoseph Pusztay break; 979d0c080abSJoseph Pusztay } 980d0c080abSJoseph Pusztay k++; 981d0c080abSJoseph Pusztay } 982d0c080abSJoseph Pusztay j++; 983d0c080abSJoseph Pusztay } 984d0c080abSJoseph Pusztay PetscFunctionReturn(0); 985d0c080abSJoseph Pusztay } 986d0c080abSJoseph Pusztay 987d0c080abSJoseph Pusztay /*@C 988d0c080abSJoseph Pusztay TSMonitorLGSetDisplayVariables - Sets the variables that are to be display in the monitor 989d0c080abSJoseph Pusztay 990bcf0153eSBarry Smith Collective on ts 991d0c080abSJoseph Pusztay 992d0c080abSJoseph Pusztay Input Parameters: 993bcf0153eSBarry Smith + ts - the `TS` context 994d0c080abSJoseph Pusztay - displaynames - the names of the components, final string must be NULL 995d0c080abSJoseph Pusztay 996d0c080abSJoseph Pusztay Level: intermediate 997d0c080abSJoseph Pusztay 998bcf0153eSBarry Smith Note: 999bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 1000bcf0153eSBarry Smith 1001bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()` 1002d0c080abSJoseph Pusztay @*/ 1003d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetDisplayVariables(TS ts, const char *const *displaynames) 1004d71ae5a4SJacob Faibussowitsch { 1005d0c080abSJoseph Pusztay PetscInt i; 1006d0c080abSJoseph Pusztay 1007d0c080abSJoseph Pusztay PetscFunctionBegin; 1008d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1009d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorLGSolution) { 10109566063dSJacob Faibussowitsch PetscCall(TSMonitorLGCtxSetDisplayVariables((TSMonitorLGCtx)ts->monitorcontext[i], displaynames)); 1011d0c080abSJoseph Pusztay break; 1012d0c080abSJoseph Pusztay } 1013d0c080abSJoseph Pusztay } 1014d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1015d0c080abSJoseph Pusztay } 1016d0c080abSJoseph Pusztay 1017d0c080abSJoseph Pusztay /*@C 1018d0c080abSJoseph Pusztay TSMonitorLGSetTransform - Solution vector will be transformed by provided function before being displayed 1019d0c080abSJoseph Pusztay 1020bcf0153eSBarry Smith Collective on ts 1021d0c080abSJoseph Pusztay 1022d0c080abSJoseph Pusztay Input Parameters: 1023bcf0153eSBarry Smith + ts - the `TS` context 1024d0c080abSJoseph Pusztay . transform - the transform function 1025d0c080abSJoseph Pusztay . destroy - function to destroy the optional context 1026d0c080abSJoseph Pusztay - ctx - optional context used by transform function 1027d0c080abSJoseph Pusztay 1028d0c080abSJoseph Pusztay Level: intermediate 1029d0c080abSJoseph Pusztay 1030bcf0153eSBarry Smith Note: 1031bcf0153eSBarry Smith If the `TS` object does not have a `TSMonitorLGCtx` associated with it then this function is ignored 1032bcf0153eSBarry Smith 1033bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGCtxSetTransform()` 1034d0c080abSJoseph Pusztay @*/ 1035d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSetTransform(TS ts, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscErrorCode (*destroy)(void *), void *tctx) 1036d71ae5a4SJacob Faibussowitsch { 1037d0c080abSJoseph Pusztay PetscInt i; 1038d0c080abSJoseph Pusztay 1039d0c080abSJoseph Pusztay PetscFunctionBegin; 1040d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 104148a46eb9SPierre Jolivet if (ts->monitor[i] == TSMonitorLGSolution) PetscCall(TSMonitorLGCtxSetTransform((TSMonitorLGCtx)ts->monitorcontext[i], transform, destroy, tctx)); 1042d0c080abSJoseph Pusztay } 1043d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1044d0c080abSJoseph Pusztay } 1045d0c080abSJoseph Pusztay 1046d0c080abSJoseph Pusztay /*@C 1047d0c080abSJoseph Pusztay TSMonitorLGCtxSetTransform - Solution vector will be transformed by provided function before being displayed 1048d0c080abSJoseph Pusztay 1049bcf0153eSBarry Smith Collective on ctx 1050d0c080abSJoseph Pusztay 1051d0c080abSJoseph Pusztay Input Parameters: 1052bcf0153eSBarry Smith + ts - the `TS` context 1053d0c080abSJoseph Pusztay . transform - the transform function 1054d0c080abSJoseph Pusztay . destroy - function to destroy the optional context 1055d0c080abSJoseph Pusztay - ctx - optional context used by transform function 1056d0c080abSJoseph Pusztay 1057d0c080abSJoseph Pusztay Level: intermediate 1058d0c080abSJoseph Pusztay 1059bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetVariableNames()`, `TSMonitorLGSetTransform()` 1060d0c080abSJoseph Pusztay @*/ 1061d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGCtxSetTransform(TSMonitorLGCtx ctx, PetscErrorCode (*transform)(void *, Vec, Vec *), PetscErrorCode (*destroy)(void *), void *tctx) 1062d71ae5a4SJacob Faibussowitsch { 1063d0c080abSJoseph Pusztay PetscFunctionBegin; 1064d0c080abSJoseph Pusztay ctx->transform = transform; 1065d0c080abSJoseph Pusztay ctx->transformdestroy = destroy; 1066d0c080abSJoseph Pusztay ctx->transformctx = tctx; 1067d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1068d0c080abSJoseph Pusztay } 1069d0c080abSJoseph Pusztay 1070d0c080abSJoseph Pusztay /*@C 1071bcf0153eSBarry Smith TSMonitorLGError - Monitors progress of the `TS` solvers by plotting each component of the error 1072d0c080abSJoseph Pusztay in a time based line graph 1073d0c080abSJoseph Pusztay 1074bcf0153eSBarry Smith Collective on ts 1075d0c080abSJoseph Pusztay 1076d0c080abSJoseph Pusztay Input Parameters: 1077bcf0153eSBarry Smith + ts - the `TS` context 1078d0c080abSJoseph Pusztay . step - current time-step 1079d0c080abSJoseph Pusztay . ptime - current time 1080d0c080abSJoseph Pusztay . u - current solution 1081bcf0153eSBarry Smith - dctx - `TSMonitorLGCtx` object created with `TSMonitorLGCtxCreate()` 1082d0c080abSJoseph Pusztay 1083bcf0153eSBarry Smith Options Database Key: 10843a61192cSBarry Smith . -ts_monitor_lg_error - create a graphical monitor of error history 10853a61192cSBarry Smith 1086d0c080abSJoseph Pusztay Level: intermediate 1087d0c080abSJoseph Pusztay 1088d0c080abSJoseph Pusztay Notes: 1089d0c080abSJoseph Pusztay Each process in a parallel run displays its component errors in a separate window 1090d0c080abSJoseph Pusztay 1091bcf0153eSBarry Smith The user must provide the solution using `TSSetSolutionFunction()` to use this monitor. 1092d0c080abSJoseph Pusztay 10933a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 10943a61192cSBarry Smith to be used during the TS integration. 1095d0c080abSJoseph Pusztay 1096bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 1097d0c080abSJoseph Pusztay @*/ 1098d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGError(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dummy) 1099d71ae5a4SJacob Faibussowitsch { 1100d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)dummy; 1101d0c080abSJoseph Pusztay const PetscScalar *yy; 1102d0c080abSJoseph Pusztay Vec y; 1103d0c080abSJoseph Pusztay 1104d0c080abSJoseph Pusztay PetscFunctionBegin; 1105d0c080abSJoseph Pusztay if (!step) { 1106d0c080abSJoseph Pusztay PetscDrawAxis axis; 1107d0c080abSJoseph Pusztay PetscInt dim; 11089566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 11099566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Error in solution as function of time", "Time", "Error")); 11109566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &dim)); 11119566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSetDimension(ctx->lg, dim)); 11129566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1113d0c080abSJoseph Pusztay } 11149566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &y)); 11159566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, y)); 11169566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, u)); 11179566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(y, &yy)); 1118d0c080abSJoseph Pusztay #if defined(PETSC_USE_COMPLEX) 1119d0c080abSJoseph Pusztay { 1120d0c080abSJoseph Pusztay PetscReal *yreal; 1121d0c080abSJoseph Pusztay PetscInt i, n; 11229566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(y, &n)); 11239566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &yreal)); 1124d0c080abSJoseph Pusztay for (i = 0; i < n; i++) yreal[i] = PetscRealPart(yy[i]); 11259566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yreal)); 11269566063dSJacob Faibussowitsch PetscCall(PetscFree(yreal)); 1127d0c080abSJoseph Pusztay } 1128d0c080abSJoseph Pusztay #else 11299566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddCommonPoint(ctx->lg, ptime, yy)); 1130d0c080abSJoseph Pusztay #endif 11319566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(y, &yy)); 11329566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 1133d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 11349566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 11359566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1136d0c080abSJoseph Pusztay } 1137d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1138d0c080abSJoseph Pusztay } 1139d0c080abSJoseph Pusztay 1140d0c080abSJoseph Pusztay /*@C 1141bcf0153eSBarry Smith TSMonitorSPSwarmSolution - Graphically displays phase plots of `DMSWARM` particles on a scatter plot 1142d0c080abSJoseph Pusztay 1143d0c080abSJoseph Pusztay Input Parameters: 1144bcf0153eSBarry Smith + ts - the `TS` context 1145d0c080abSJoseph Pusztay . step - current time-step 1146d0c080abSJoseph Pusztay . ptime - current time 1147d0c080abSJoseph Pusztay . u - current solution 1148bcf0153eSBarry Smith - dctx - the `TSMonitorSPCtx` object that contains all the options for the monitoring, this is created with `TSMonitorSPCtxCreate()` 1149d0c080abSJoseph Pusztay 1150bcf0153eSBarry Smith Options Database Keys: 1151d7462660SMatthew Knepley + -ts_monitor_sp_swarm <n> - Monitor the solution every n steps, or -1 for plotting only the final solution 1152d7462660SMatthew Knepley . -ts_monitor_sp_swarm_retain <n> - Retain n old points so we can see the history, or -1 for all points 1153d7462660SMatthew Knepley - -ts_monitor_sp_swarm_phase <bool> - Plot in phase space, as opposed to coordinate space 1154d0c080abSJoseph Pusztay 1155d0c080abSJoseph Pusztay Level: intermediate 1156d0c080abSJoseph Pusztay 11573a61192cSBarry Smith Notes: 11583a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1159bcf0153eSBarry Smith to be used during the `TS` integration. 11603a61192cSBarry Smith 1161bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitoSet()`, `DMSWARM`, `TSMonitorSPCtxCreate()` 1162d0c080abSJoseph Pusztay @*/ 1163d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorSPSwarmSolution(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 1164d71ae5a4SJacob Faibussowitsch { 1165d0c080abSJoseph Pusztay TSMonitorSPCtx ctx = (TSMonitorSPCtx)dctx; 1166f98b2f00SMatthew G. Knepley PetscDraw draw; 1167d7462660SMatthew Knepley DM dm, cdm; 1168d0c080abSJoseph Pusztay const PetscScalar *yy; 1169d0c080abSJoseph Pusztay PetscInt Np, p, dim = 2; 1170d0c080abSJoseph Pusztay 1171d0c080abSJoseph Pusztay PetscFunctionBegin; 1172d0c080abSJoseph Pusztay if (step < 0) PetscFunctionReturn(0); /* -1 indicates interpolated solution */ 1173d0c080abSJoseph Pusztay if (!step) { 1174d0c080abSJoseph Pusztay PetscDrawAxis axis; 1175ab43fcacSJoe Pusztay PetscReal dmboxlower[2], dmboxupper[2]; 1176f98b2f00SMatthew G. Knepley 11779566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 11789566063dSJacob Faibussowitsch PetscCall(DMGetDimension(dm, &dim)); 11793c633725SBarry Smith PetscCheck(dim == 2, PETSC_COMM_SELF, PETSC_ERR_SUP, "Monitor only supports two dimensional fields"); 11809566063dSJacob Faibussowitsch PetscCall(DMSwarmGetCellDM(dm, &cdm)); 11819566063dSJacob Faibussowitsch PetscCall(DMGetBoundingBox(cdm, dmboxlower, dmboxupper)); 11829566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &Np)); 1183d7462660SMatthew Knepley Np /= dim * 2; 11849566063dSJacob Faibussowitsch PetscCall(PetscDrawSPGetAxis(ctx->sp, &axis)); 11858c87cf4dSdanfinn if (ctx->phase) { 11869566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "V")); 11879566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], -5, 5)); 11888c87cf4dSdanfinn } else { 11899566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Particles", "X", "Y")); 11909566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLimits(axis, dmboxlower[0], dmboxupper[0], dmboxlower[1], dmboxupper[1])); 11918c87cf4dSdanfinn } 11929566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetHoldLimits(axis, PETSC_TRUE)); 11939566063dSJacob Faibussowitsch PetscCall(PetscDrawSPReset(ctx->sp)); 1194d0c080abSJoseph Pusztay } 11959566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(u, &Np)); 1196d7462660SMatthew Knepley Np /= dim * 2; 1197d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(step % ctx->howoften))) || ((ctx->howoften == -1) && ts->reason)) { 11989566063dSJacob Faibussowitsch PetscCall(PetscDrawSPGetDraw(ctx->sp, &draw)); 119948a46eb9SPierre Jolivet if ((ctx->retain == 0) || (ctx->retain > 0 && !(step % ctx->retain))) PetscCall(PetscDrawClear(draw)); 12009566063dSJacob Faibussowitsch PetscCall(PetscDrawFlush(draw)); 12019566063dSJacob Faibussowitsch PetscCall(PetscDrawSPReset(ctx->sp)); 1202f98b2f00SMatthew G. Knepley PetscCall(VecGetArrayRead(u, &yy)); 1203f98b2f00SMatthew G. Knepley for (p = 0; p < Np; ++p) { 1204f98b2f00SMatthew G. Knepley PetscReal x, y; 1205f98b2f00SMatthew G. Knepley 1206f98b2f00SMatthew G. Knepley if (ctx->phase) { 1207f98b2f00SMatthew G. Knepley x = PetscRealPart(yy[p * dim * 2]); 1208f98b2f00SMatthew G. Knepley y = PetscRealPart(yy[p * dim * 2 + dim]); 1209f98b2f00SMatthew G. Knepley } else { 1210f98b2f00SMatthew G. Knepley x = PetscRealPart(yy[p * dim * 2]); 1211f98b2f00SMatthew G. Knepley y = PetscRealPart(yy[p * dim * 2 + 1]); 1212f98b2f00SMatthew G. Knepley } 1213f98b2f00SMatthew G. Knepley PetscCall(PetscDrawSPAddPoint(ctx->sp, &x, &y)); 1214f98b2f00SMatthew G. Knepley } 1215f98b2f00SMatthew G. Knepley PetscCall(VecRestoreArrayRead(u, &yy)); 12169566063dSJacob Faibussowitsch PetscCall(PetscDrawSPDraw(ctx->sp, PETSC_FALSE)); 12179566063dSJacob Faibussowitsch PetscCall(PetscDrawSPSave(ctx->sp)); 1218d0c080abSJoseph Pusztay } 1219d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1220d0c080abSJoseph Pusztay } 1221d0c080abSJoseph Pusztay 1222d0c080abSJoseph Pusztay /*@C 1223bcf0153eSBarry Smith TSMonitorError - Monitors progress of the `TS` solvers by printing the 2 norm of the error at each timestep 1224d0c080abSJoseph Pusztay 1225bcf0153eSBarry Smith Collective on ts 1226d0c080abSJoseph Pusztay 1227d0c080abSJoseph Pusztay Input Parameters: 1228bcf0153eSBarry Smith + ts - the `TS` context 1229d0c080abSJoseph Pusztay . step - current time-step 1230d0c080abSJoseph Pusztay . ptime - current time 1231d0c080abSJoseph Pusztay . u - current solution 1232d0c080abSJoseph Pusztay - dctx - unused context 1233d0c080abSJoseph Pusztay 1234bcf0153eSBarry Smith Options Database Key: 1235bcf0153eSBarry Smith . -ts_monitor_error - create a graphical monitor of error history 1236bcf0153eSBarry Smith 1237d0c080abSJoseph Pusztay Level: intermediate 1238d0c080abSJoseph Pusztay 12393a61192cSBarry Smith Notes: 12403a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1241bcf0153eSBarry Smith to be used during the `TS` integration. 12423a61192cSBarry Smith 1243bcf0153eSBarry Smith The user must provide the solution using `TSSetSolutionFunction()` to use this monitor. 1244d0c080abSJoseph Pusztay 1245bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSSetSolutionFunction()` 1246d0c080abSJoseph Pusztay @*/ 1247d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorError(TS ts, PetscInt step, PetscReal ptime, Vec u, PetscViewerAndFormat *vf) 1248d71ae5a4SJacob Faibussowitsch { 124907eaae0cSMatthew G. Knepley DM dm; 125007eaae0cSMatthew G. Knepley PetscDS ds = NULL; 125107eaae0cSMatthew G. Knepley PetscInt Nf = -1, f; 1252d0c080abSJoseph Pusztay PetscBool flg; 1253d0c080abSJoseph Pusztay 1254d0c080abSJoseph Pusztay PetscFunctionBegin; 12559566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &dm)); 12569566063dSJacob Faibussowitsch if (dm) PetscCall(DMGetDS(dm, &ds)); 12579566063dSJacob Faibussowitsch if (ds) PetscCall(PetscDSGetNumFields(ds, &Nf)); 125807eaae0cSMatthew G. Knepley if (Nf <= 0) { 125907eaae0cSMatthew G. Knepley Vec y; 126007eaae0cSMatthew G. Knepley PetscReal nrm; 126107eaae0cSMatthew G. Knepley 12629566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &y)); 12639566063dSJacob Faibussowitsch PetscCall(TSComputeSolutionFunction(ts, ptime, y)); 12649566063dSJacob Faibussowitsch PetscCall(VecAXPY(y, -1.0, u)); 12659566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERASCII, &flg)); 1266d0c080abSJoseph Pusztay if (flg) { 12679566063dSJacob Faibussowitsch PetscCall(VecNorm(y, NORM_2, &nrm)); 12689566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(vf->viewer, "2-norm of error %g\n", (double)nrm)); 1269d0c080abSJoseph Pusztay } 12709566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)vf->viewer, PETSCVIEWERDRAW, &flg)); 12711baa6e33SBarry Smith if (flg) PetscCall(VecView(y, vf->viewer)); 12729566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 127307eaae0cSMatthew G. Knepley } else { 127407eaae0cSMatthew G. Knepley PetscErrorCode (**exactFuncs)(PetscInt dim, PetscReal time, const PetscReal x[], PetscInt Nf, PetscScalar *u, void *ctx); 127507eaae0cSMatthew G. Knepley void **ctxs; 127607eaae0cSMatthew G. Knepley Vec v; 127707eaae0cSMatthew G. Knepley PetscReal ferrors[1]; 127807eaae0cSMatthew G. Knepley 12799566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(Nf, &exactFuncs, Nf, &ctxs)); 12809566063dSJacob Faibussowitsch for (f = 0; f < Nf; ++f) PetscCall(PetscDSGetExactSolution(ds, f, &exactFuncs[f], &ctxs[f])); 12819566063dSJacob Faibussowitsch PetscCall(DMComputeL2FieldDiff(dm, ptime, exactFuncs, ctxs, u, ferrors)); 12829566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Timestep: %04d time = %-8.4g \t L_2 Error: [", (int)step, (double)ptime)); 128307eaae0cSMatthew G. Knepley for (f = 0; f < Nf; ++f) { 12849566063dSJacob Faibussowitsch if (f > 0) PetscCall(PetscPrintf(PETSC_COMM_WORLD, ", ")); 12859566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "%2.3g", (double)ferrors[f])); 128607eaae0cSMatthew G. Knepley } 12879566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "]\n")); 128807eaae0cSMatthew G. Knepley 12899566063dSJacob Faibussowitsch PetscCall(VecViewFromOptions(u, NULL, "-sol_vec_view")); 129007eaae0cSMatthew G. Knepley 12919566063dSJacob Faibussowitsch PetscCall(PetscOptionsHasName(NULL, NULL, "-exact_vec_view", &flg)); 129207eaae0cSMatthew G. Knepley if (flg) { 12939566063dSJacob Faibussowitsch PetscCall(DMGetGlobalVector(dm, &v)); 12949566063dSJacob Faibussowitsch PetscCall(DMProjectFunction(dm, ptime, exactFuncs, ctxs, INSERT_ALL_VALUES, v)); 12959566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)v, "Exact Solution")); 12969566063dSJacob Faibussowitsch PetscCall(VecViewFromOptions(v, NULL, "-exact_vec_view")); 12979566063dSJacob Faibussowitsch PetscCall(DMRestoreGlobalVector(dm, &v)); 129807eaae0cSMatthew G. Knepley } 12999566063dSJacob Faibussowitsch PetscCall(PetscFree2(exactFuncs, ctxs)); 130007eaae0cSMatthew G. Knepley } 1301d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1302d0c080abSJoseph Pusztay } 1303d0c080abSJoseph Pusztay 1304d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGSNESIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx) 1305d71ae5a4SJacob Faibussowitsch { 1306d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 1307d0c080abSJoseph Pusztay PetscReal x = ptime, y; 1308d0c080abSJoseph Pusztay PetscInt its; 1309d0c080abSJoseph Pusztay 1310d0c080abSJoseph Pusztay PetscFunctionBegin; 1311d0c080abSJoseph Pusztay if (n < 0) PetscFunctionReturn(0); /* -1 indicates interpolated solution */ 1312d0c080abSJoseph Pusztay if (!n) { 1313d0c080abSJoseph Pusztay PetscDrawAxis axis; 13149566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 13159566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Nonlinear iterations as function of time", "Time", "SNES Iterations")); 13169566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1317d0c080abSJoseph Pusztay ctx->snes_its = 0; 1318d0c080abSJoseph Pusztay } 13199566063dSJacob Faibussowitsch PetscCall(TSGetSNESIterations(ts, &its)); 1320d0c080abSJoseph Pusztay y = its - ctx->snes_its; 13219566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 1322d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) { 13239566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 13249566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1325d0c080abSJoseph Pusztay } 1326d0c080abSJoseph Pusztay ctx->snes_its = its; 1327d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1328d0c080abSJoseph Pusztay } 1329d0c080abSJoseph Pusztay 1330d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorLGKSPIterations(TS ts, PetscInt n, PetscReal ptime, Vec v, void *monctx) 1331d71ae5a4SJacob Faibussowitsch { 1332d0c080abSJoseph Pusztay TSMonitorLGCtx ctx = (TSMonitorLGCtx)monctx; 1333d0c080abSJoseph Pusztay PetscReal x = ptime, y; 1334d0c080abSJoseph Pusztay PetscInt its; 1335d0c080abSJoseph Pusztay 1336d0c080abSJoseph Pusztay PetscFunctionBegin; 1337d0c080abSJoseph Pusztay if (n < 0) PetscFunctionReturn(0); /* -1 indicates interpolated solution */ 1338d0c080abSJoseph Pusztay if (!n) { 1339d0c080abSJoseph Pusztay PetscDrawAxis axis; 13409566063dSJacob Faibussowitsch PetscCall(PetscDrawLGGetAxis(ctx->lg, &axis)); 13419566063dSJacob Faibussowitsch PetscCall(PetscDrawAxisSetLabels(axis, "Linear iterations as function of time", "Time", "KSP Iterations")); 13429566063dSJacob Faibussowitsch PetscCall(PetscDrawLGReset(ctx->lg)); 1343d0c080abSJoseph Pusztay ctx->ksp_its = 0; 1344d0c080abSJoseph Pusztay } 13459566063dSJacob Faibussowitsch PetscCall(TSGetKSPIterations(ts, &its)); 1346d0c080abSJoseph Pusztay y = its - ctx->ksp_its; 13479566063dSJacob Faibussowitsch PetscCall(PetscDrawLGAddPoint(ctx->lg, &x, &y)); 1348d0c080abSJoseph Pusztay if (((ctx->howoften > 0) && (!(n % ctx->howoften)) && (n > -1)) || ((ctx->howoften == -1) && (n == -1))) { 13499566063dSJacob Faibussowitsch PetscCall(PetscDrawLGDraw(ctx->lg)); 13509566063dSJacob Faibussowitsch PetscCall(PetscDrawLGSave(ctx->lg)); 1351d0c080abSJoseph Pusztay } 1352d0c080abSJoseph Pusztay ctx->ksp_its = its; 1353d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1354d0c080abSJoseph Pusztay } 1355d0c080abSJoseph Pusztay 1356d0c080abSJoseph Pusztay /*@C 1357bcf0153eSBarry Smith TSMonitorEnvelopeCtxCreate - Creates a context for use with `TSMonitorEnvelope()` 1358d0c080abSJoseph Pusztay 1359bcf0153eSBarry Smith Collective on ts 1360d0c080abSJoseph Pusztay 1361d0c080abSJoseph Pusztay Input Parameters: 1362bcf0153eSBarry Smith . ts - the `TS` solver object 1363d0c080abSJoseph Pusztay 1364d0c080abSJoseph Pusztay Output Parameter: 1365d0c080abSJoseph Pusztay . ctx - the context 1366d0c080abSJoseph Pusztay 1367d0c080abSJoseph Pusztay Level: intermediate 1368d0c080abSJoseph Pusztay 1369bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorLGTimeStep()`, `TSMonitorSet()`, `TSMonitorLGSolution()`, `TSMonitorLGError()` 1370d0c080abSJoseph Pusztay @*/ 1371d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxCreate(TS ts, TSMonitorEnvelopeCtx *ctx) 1372d71ae5a4SJacob Faibussowitsch { 1373d0c080abSJoseph Pusztay PetscFunctionBegin; 13749566063dSJacob Faibussowitsch PetscCall(PetscNew(ctx)); 1375d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1376d0c080abSJoseph Pusztay } 1377d0c080abSJoseph Pusztay 1378d0c080abSJoseph Pusztay /*@C 1379d0c080abSJoseph Pusztay TSMonitorEnvelope - Monitors the maximum and minimum value of each component of the solution 1380d0c080abSJoseph Pusztay 1381bcf0153eSBarry Smith Collective on ts 1382d0c080abSJoseph Pusztay 1383d0c080abSJoseph Pusztay Input Parameters: 1384d0c080abSJoseph Pusztay + ts - the TS context 1385d0c080abSJoseph Pusztay . step - current time-step 1386d0c080abSJoseph Pusztay . ptime - current time 1387d0c080abSJoseph Pusztay . u - current solution 1388d0c080abSJoseph Pusztay - dctx - the envelope context 1389d0c080abSJoseph Pusztay 1390bcf0153eSBarry Smith Options Database Key: 139167b8a455SSatish Balay . -ts_monitor_envelope - determine maximum and minimum value of each component of the solution over the solution time 1392d0c080abSJoseph Pusztay 1393d0c080abSJoseph Pusztay Level: intermediate 1394d0c080abSJoseph Pusztay 1395d0c080abSJoseph Pusztay Notes: 1396bcf0153eSBarry Smith After a solve you can use `TSMonitorEnvelopeGetBounds()` to access the envelope 13973a61192cSBarry Smith 13983a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 1399bcf0153eSBarry Smith to be used during the `TS` integration. 1400d0c080abSJoseph Pusztay 1401bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorEnvelopeGetBounds()`, `TSMonitorEnvelopeCtxCreate()` 1402d0c080abSJoseph Pusztay @*/ 1403d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelope(TS ts, PetscInt step, PetscReal ptime, Vec u, void *dctx) 1404d71ae5a4SJacob Faibussowitsch { 1405d0c080abSJoseph Pusztay TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)dctx; 1406d0c080abSJoseph Pusztay 1407d0c080abSJoseph Pusztay PetscFunctionBegin; 1408d0c080abSJoseph Pusztay if (!ctx->max) { 14099566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &ctx->max)); 14109566063dSJacob Faibussowitsch PetscCall(VecDuplicate(u, &ctx->min)); 14119566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ctx->max)); 14129566063dSJacob Faibussowitsch PetscCall(VecCopy(u, ctx->min)); 1413d0c080abSJoseph Pusztay } else { 14149566063dSJacob Faibussowitsch PetscCall(VecPointwiseMax(ctx->max, u, ctx->max)); 14159566063dSJacob Faibussowitsch PetscCall(VecPointwiseMin(ctx->min, u, ctx->min)); 1416d0c080abSJoseph Pusztay } 1417d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1418d0c080abSJoseph Pusztay } 1419d0c080abSJoseph Pusztay 1420d0c080abSJoseph Pusztay /*@C 1421d0c080abSJoseph Pusztay TSMonitorEnvelopeGetBounds - Gets the bounds for the components of the solution 1422d0c080abSJoseph Pusztay 1423bcf0153eSBarry Smith Collective on ts 1424d0c080abSJoseph Pusztay 1425d0c080abSJoseph Pusztay Input Parameter: 1426bcf0153eSBarry Smith . ts - the `TS` context 1427d0c080abSJoseph Pusztay 1428d8d19677SJose E. Roman Output Parameters: 1429d0c080abSJoseph Pusztay + max - the maximum values 1430d0c080abSJoseph Pusztay - min - the minimum values 1431d0c080abSJoseph Pusztay 1432d0c080abSJoseph Pusztay Notes: 1433bcf0153eSBarry Smith If the `TS` does not have a `TSMonitorEnvelopeCtx` associated with it then this function is ignored 1434d0c080abSJoseph Pusztay 1435d0c080abSJoseph Pusztay Level: intermediate 1436d0c080abSJoseph Pusztay 1437bcf0153eSBarry Smith .seealso: [](chapter_ts), `TSMonitorEnvelopeCtx`, `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `VecView()`, `TSMonitorLGSetDisplayVariables()` 1438d0c080abSJoseph Pusztay @*/ 1439d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeGetBounds(TS ts, Vec *max, Vec *min) 1440d71ae5a4SJacob Faibussowitsch { 1441d0c080abSJoseph Pusztay PetscInt i; 1442d0c080abSJoseph Pusztay 1443d0c080abSJoseph Pusztay PetscFunctionBegin; 1444d0c080abSJoseph Pusztay if (max) *max = NULL; 1445d0c080abSJoseph Pusztay if (min) *min = NULL; 1446d0c080abSJoseph Pusztay for (i = 0; i < ts->numbermonitors; i++) { 1447d0c080abSJoseph Pusztay if (ts->monitor[i] == TSMonitorEnvelope) { 1448d0c080abSJoseph Pusztay TSMonitorEnvelopeCtx ctx = (TSMonitorEnvelopeCtx)ts->monitorcontext[i]; 1449d0c080abSJoseph Pusztay if (max) *max = ctx->max; 1450d0c080abSJoseph Pusztay if (min) *min = ctx->min; 1451d0c080abSJoseph Pusztay break; 1452d0c080abSJoseph Pusztay } 1453d0c080abSJoseph Pusztay } 1454d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1455d0c080abSJoseph Pusztay } 1456d0c080abSJoseph Pusztay 1457d0c080abSJoseph Pusztay /*@C 1458bcf0153eSBarry Smith TSMonitorEnvelopeCtxDestroy - Destroys a context that was created with `TSMonitorEnvelopeCtxCreate()`. 1459d0c080abSJoseph Pusztay 1460bcf0153eSBarry Smith Collective on ctx 1461d0c080abSJoseph Pusztay 1462d0c080abSJoseph Pusztay Input Parameter: 1463d0c080abSJoseph Pusztay . ctx - the monitor context 1464d0c080abSJoseph Pusztay 1465d0c080abSJoseph Pusztay Level: intermediate 1466d0c080abSJoseph Pusztay 1467bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorLGCtxCreate()`, `TSMonitorSet()`, `TSMonitorLGTimeStep()` 1468d0c080abSJoseph Pusztay @*/ 1469d71ae5a4SJacob Faibussowitsch PetscErrorCode TSMonitorEnvelopeCtxDestroy(TSMonitorEnvelopeCtx *ctx) 1470d71ae5a4SJacob Faibussowitsch { 1471d0c080abSJoseph Pusztay PetscFunctionBegin; 14729566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ctx)->min)); 14739566063dSJacob Faibussowitsch PetscCall(VecDestroy(&(*ctx)->max)); 14749566063dSJacob Faibussowitsch PetscCall(PetscFree(*ctx)); 1475d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1476d0c080abSJoseph Pusztay } 1477d0c080abSJoseph Pusztay 1478d0c080abSJoseph Pusztay /*@C 1479bcf0153eSBarry Smith TSDMSwarmMonitorMoments - Monitors the first three moments of a `DMSWARM` being evolved by the `TS` 1480d0c080abSJoseph Pusztay 1481d0c080abSJoseph Pusztay Not collective 1482d0c080abSJoseph Pusztay 1483d0c080abSJoseph Pusztay Input Parameters: 1484bcf0153eSBarry Smith + ts - the `TS` context 1485d0c080abSJoseph Pusztay . step - current timestep 1486d0c080abSJoseph Pusztay . t - current time 1487d0c080abSJoseph Pusztay . u - current solution 1488d0c080abSJoseph Pusztay - ctx - not used 1489d0c080abSJoseph Pusztay 1490bcf0153eSBarry Smith Options Database Key: 149167b8a455SSatish Balay . -ts_dmswarm_monitor_moments - Monitor moments of particle distribution 1492d0c080abSJoseph Pusztay 1493d0c080abSJoseph Pusztay Level: intermediate 1494d0c080abSJoseph Pusztay 1495d0c080abSJoseph Pusztay Notes: 1496bcf0153eSBarry Smith This requires a `DMSWARM` be attached to the `TS`. 1497d0c080abSJoseph Pusztay 14983a61192cSBarry Smith This is not called directly by users, rather one calls `TSMonitorSet()`, with this function as an argument, to cause the monitor 14993a61192cSBarry Smith to be used during the TS integration. 15003a61192cSBarry Smith 1501bcf0153eSBarry Smith .seealso: [](chapter_ts), `TS`, `TSMonitorSet()`, `TSMonitorDefault()`, `DMSWARM` 1502d0c080abSJoseph Pusztay @*/ 1503d71ae5a4SJacob Faibussowitsch PetscErrorCode TSDMSwarmMonitorMoments(TS ts, PetscInt step, PetscReal t, Vec U, PetscViewerAndFormat *vf) 1504d71ae5a4SJacob Faibussowitsch { 1505d0c080abSJoseph Pusztay DM sw; 1506d0c080abSJoseph Pusztay const PetscScalar *u; 1507d0c080abSJoseph Pusztay PetscReal m = 1.0, totE = 0., totMom[3] = {0., 0., 0.}; 1508d0c080abSJoseph Pusztay PetscInt dim, d, Np, p; 1509d0c080abSJoseph Pusztay MPI_Comm comm; 1510d0c080abSJoseph Pusztay 1511d0c080abSJoseph Pusztay PetscFunctionBeginUser; 15129566063dSJacob Faibussowitsch PetscCall(TSGetDM(ts, &sw)); 1513d0c080abSJoseph Pusztay if (!sw || step % ts->monitorFrequency != 0) PetscFunctionReturn(0); 15149566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)ts, &comm)); 15159566063dSJacob Faibussowitsch PetscCall(DMGetDimension(sw, &dim)); 15169566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(U, &Np)); 1517d0c080abSJoseph Pusztay Np /= dim; 15189566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(U, &u)); 1519d0c080abSJoseph Pusztay for (p = 0; p < Np; ++p) { 1520d0c080abSJoseph Pusztay for (d = 0; d < dim; ++d) { 1521d0c080abSJoseph Pusztay totE += PetscRealPart(u[p * dim + d] * u[p * dim + d]); 1522d0c080abSJoseph Pusztay totMom[d] += PetscRealPart(u[p * dim + d]); 1523d0c080abSJoseph Pusztay } 1524d0c080abSJoseph Pusztay } 15259566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(U, &u)); 1526d0c080abSJoseph Pusztay for (d = 0; d < dim; ++d) totMom[d] *= m; 1527d0c080abSJoseph Pusztay totE *= 0.5 * m; 152863a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(comm, "Step %4" PetscInt_FMT " Total Energy: %10.8lf", step, (double)totE)); 152963a3b9bcSJacob Faibussowitsch for (d = 0; d < dim; ++d) PetscCall(PetscPrintf(comm, " Total Momentum %c: %10.8lf", (char)('x' + d), (double)totMom[d])); 15309566063dSJacob Faibussowitsch PetscCall(PetscPrintf(comm, "\n")); 1531d0c080abSJoseph Pusztay PetscFunctionReturn(0); 1532d0c080abSJoseph Pusztay } 1533