1*c4762a1bSJed Brown static char help[] = "Solves DAE with integrator only on non-algebraic terms \n"; 2*c4762a1bSJed Brown 3*c4762a1bSJed Brown #include <petscts.h> 4*c4762a1bSJed Brown 5*c4762a1bSJed Brown /* 6*c4762a1bSJed Brown \dot{U} = f(U,V) 7*c4762a1bSJed Brown F(U,V) = 0 8*c4762a1bSJed Brown 9*c4762a1bSJed Brown Same as ex6.c except the user provided functions take input values as a single vector instead of two vectors 10*c4762a1bSJed Brown */ 11*c4762a1bSJed Brown 12*c4762a1bSJed Brown 13*c4762a1bSJed Brown /* 14*c4762a1bSJed Brown f(U,V) = U + V 15*c4762a1bSJed Brown 16*c4762a1bSJed Brown */ 17*c4762a1bSJed Brown PetscErrorCode f(PetscReal t,Vec UV,Vec F) 18*c4762a1bSJed Brown { 19*c4762a1bSJed Brown PetscErrorCode ierr; 20*c4762a1bSJed Brown const PetscScalar *u,*v; 21*c4762a1bSJed Brown PetscScalar *f; 22*c4762a1bSJed Brown PetscInt n,i; 23*c4762a1bSJed Brown 24*c4762a1bSJed Brown PetscFunctionBeginUser; 25*c4762a1bSJed Brown ierr = VecGetLocalSize(UV,&n);CHKERRQ(ierr); 26*c4762a1bSJed Brown n = n/2; 27*c4762a1bSJed Brown ierr = VecGetArrayRead(UV,&u);CHKERRQ(ierr); 28*c4762a1bSJed Brown v = u + n; 29*c4762a1bSJed Brown ierr = VecGetArray(F,&f);CHKERRQ(ierr); 30*c4762a1bSJed Brown for (i=0; i<n; i++) f[i] = u[i] + v[i]; 31*c4762a1bSJed Brown ierr = VecRestoreArrayRead(UV,&u);CHKERRQ(ierr); 32*c4762a1bSJed Brown ierr = VecRestoreArray(F,&f);CHKERRQ(ierr); 33*c4762a1bSJed Brown PetscFunctionReturn(0); 34*c4762a1bSJed Brown } 35*c4762a1bSJed Brown 36*c4762a1bSJed Brown /* 37*c4762a1bSJed Brown F(U,V) = U - V 38*c4762a1bSJed Brown 39*c4762a1bSJed Brown */ 40*c4762a1bSJed Brown PetscErrorCode F(PetscReal t,Vec UV,Vec F) 41*c4762a1bSJed Brown { 42*c4762a1bSJed Brown PetscErrorCode ierr; 43*c4762a1bSJed Brown const PetscScalar *u,*v; 44*c4762a1bSJed Brown PetscScalar *f; 45*c4762a1bSJed Brown PetscInt n,i; 46*c4762a1bSJed Brown 47*c4762a1bSJed Brown PetscFunctionBeginUser; 48*c4762a1bSJed Brown ierr = VecGetLocalSize(UV,&n);CHKERRQ(ierr); 49*c4762a1bSJed Brown n = n/2; 50*c4762a1bSJed Brown ierr = VecGetArrayRead(UV,&u);CHKERRQ(ierr); 51*c4762a1bSJed Brown v = u + n; 52*c4762a1bSJed Brown ierr = VecGetArray(F,&f);CHKERRQ(ierr); 53*c4762a1bSJed Brown for (i=0; i<n; i++) f[i] = u[i] - v[i]; 54*c4762a1bSJed Brown ierr = VecRestoreArrayRead(UV,&u);CHKERRQ(ierr); 55*c4762a1bSJed Brown ierr = VecRestoreArray(F,&f);CHKERRQ(ierr); 56*c4762a1bSJed Brown PetscFunctionReturn(0); 57*c4762a1bSJed Brown } 58*c4762a1bSJed Brown 59*c4762a1bSJed Brown typedef struct { 60*c4762a1bSJed Brown PetscReal t; 61*c4762a1bSJed Brown SNES snes; 62*c4762a1bSJed Brown Vec UV,V; 63*c4762a1bSJed Brown VecScatter scatterU,scatterV; 64*c4762a1bSJed Brown PetscErrorCode (*f)(PetscReal,Vec,Vec); 65*c4762a1bSJed Brown PetscErrorCode (*F)(PetscReal,Vec,Vec); 66*c4762a1bSJed Brown } AppCtx; 67*c4762a1bSJed Brown 68*c4762a1bSJed Brown extern PetscErrorCode TSFunction(TS,PetscReal,Vec,Vec,void*); 69*c4762a1bSJed Brown extern PetscErrorCode SNESFunction(SNES,Vec,Vec,void*); 70*c4762a1bSJed Brown 71*c4762a1bSJed Brown int main(int argc,char **argv) 72*c4762a1bSJed Brown { 73*c4762a1bSJed Brown PetscErrorCode ierr; 74*c4762a1bSJed Brown AppCtx ctx; 75*c4762a1bSJed Brown TS ts; 76*c4762a1bSJed Brown Vec tsrhs,U; 77*c4762a1bSJed Brown IS is; 78*c4762a1bSJed Brown PetscInt I; 79*c4762a1bSJed Brown PetscMPIInt rank; 80*c4762a1bSJed Brown 81*c4762a1bSJed Brown ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr; 82*c4762a1bSJed Brown ierr = MPI_Comm_rank(PETSC_COMM_WORLD,&rank);CHKERRQ(ierr); 83*c4762a1bSJed Brown ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr); 84*c4762a1bSJed Brown ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr); 85*c4762a1bSJed Brown ierr = TSSetType(ts,TSEULER);CHKERRQ(ierr); 86*c4762a1bSJed Brown ierr = TSSetFromOptions(ts);CHKERRQ(ierr); 87*c4762a1bSJed Brown ierr = VecCreateMPI(PETSC_COMM_WORLD,1,PETSC_DETERMINE,&tsrhs);CHKERRQ(ierr); 88*c4762a1bSJed Brown ierr = VecCreateMPI(PETSC_COMM_WORLD,1,PETSC_DETERMINE,&U);CHKERRQ(ierr); 89*c4762a1bSJed Brown ierr = TSSetRHSFunction(ts,tsrhs,TSFunction,&ctx);CHKERRQ(ierr); 90*c4762a1bSJed Brown ctx.f = f; 91*c4762a1bSJed Brown 92*c4762a1bSJed Brown ierr = SNESCreate(PETSC_COMM_WORLD,&ctx.snes);CHKERRQ(ierr); 93*c4762a1bSJed Brown ierr = SNESSetFromOptions(ctx.snes);CHKERRQ(ierr); 94*c4762a1bSJed Brown ierr = SNESSetFunction(ctx.snes,NULL,SNESFunction,&ctx);CHKERRQ(ierr); 95*c4762a1bSJed Brown ierr = SNESSetJacobian(ctx.snes,NULL,NULL,SNESComputeJacobianDefault,&ctx);CHKERRQ(ierr); 96*c4762a1bSJed Brown ctx.F = F; 97*c4762a1bSJed Brown ierr = VecCreateMPI(PETSC_COMM_WORLD,1,PETSC_DETERMINE,&ctx.V);CHKERRQ(ierr); 98*c4762a1bSJed Brown 99*c4762a1bSJed Brown /* Create scatters to move between separate U and V representation and UV representation of solution */ 100*c4762a1bSJed Brown ierr = VecCreateMPI(PETSC_COMM_WORLD,2,PETSC_DETERMINE,&ctx.UV);CHKERRQ(ierr); 101*c4762a1bSJed Brown I = 2*rank; 102*c4762a1bSJed Brown ierr = ISCreateGeneral(PETSC_COMM_WORLD,1,&I,PETSC_COPY_VALUES,&is);CHKERRQ(ierr); 103*c4762a1bSJed Brown ierr = VecScatterCreate(U,NULL,ctx.UV,is,&ctx.scatterU);CHKERRQ(ierr); 104*c4762a1bSJed Brown ierr = ISDestroy(&is);CHKERRQ(ierr); 105*c4762a1bSJed Brown I = 2*rank + 1; 106*c4762a1bSJed Brown ierr = ISCreateGeneral(PETSC_COMM_WORLD,1,&I,PETSC_COPY_VALUES,&is);CHKERRQ(ierr); 107*c4762a1bSJed Brown ierr = VecScatterCreate(ctx.V,NULL,ctx.UV,is,&ctx.scatterV);CHKERRQ(ierr); 108*c4762a1bSJed Brown ierr = ISDestroy(&is);CHKERRQ(ierr); 109*c4762a1bSJed Brown 110*c4762a1bSJed Brown ierr = VecSet(U,1.0);CHKERRQ(ierr); 111*c4762a1bSJed Brown ierr = TSSolve(ts,U);CHKERRQ(ierr); 112*c4762a1bSJed Brown 113*c4762a1bSJed Brown ierr = VecDestroy(&ctx.V);CHKERRQ(ierr); 114*c4762a1bSJed Brown ierr = VecDestroy(&ctx.UV);CHKERRQ(ierr); 115*c4762a1bSJed Brown ierr = VecScatterDestroy(&ctx.scatterU);CHKERRQ(ierr); 116*c4762a1bSJed Brown ierr = VecScatterDestroy(&ctx.scatterV);CHKERRQ(ierr); 117*c4762a1bSJed Brown ierr = VecDestroy(&tsrhs);CHKERRQ(ierr); 118*c4762a1bSJed Brown ierr = VecDestroy(&U);CHKERRQ(ierr); 119*c4762a1bSJed Brown ierr = SNESDestroy(&ctx.snes);CHKERRQ(ierr); 120*c4762a1bSJed Brown ierr = TSDestroy(&ts);CHKERRQ(ierr); 121*c4762a1bSJed Brown ierr = PetscFinalize(); 122*c4762a1bSJed Brown return ierr; 123*c4762a1bSJed Brown } 124*c4762a1bSJed Brown 125*c4762a1bSJed Brown /* 126*c4762a1bSJed Brown Defines the RHS function that is passed to the time-integrator. 127*c4762a1bSJed Brown 128*c4762a1bSJed Brown Solves F(U,V) for V and then computes f(U,V) 129*c4762a1bSJed Brown 130*c4762a1bSJed Brown */ 131*c4762a1bSJed Brown PetscErrorCode TSFunction(TS ts,PetscReal t,Vec U,Vec F,void *actx) 132*c4762a1bSJed Brown { 133*c4762a1bSJed Brown AppCtx *ctx = (AppCtx*)actx; 134*c4762a1bSJed Brown PetscErrorCode ierr; 135*c4762a1bSJed Brown 136*c4762a1bSJed Brown PetscFunctionBeginUser; 137*c4762a1bSJed Brown ctx->t = t; 138*c4762a1bSJed Brown ierr = VecScatterBegin(ctx->scatterU,U,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 139*c4762a1bSJed Brown ierr = VecScatterEnd(ctx->scatterU,U,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 140*c4762a1bSJed Brown ierr = SNESSolve(ctx->snes,NULL,ctx->V);CHKERRQ(ierr); 141*c4762a1bSJed Brown ierr = VecScatterBegin(ctx->scatterV,ctx->V,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 142*c4762a1bSJed Brown ierr = VecScatterEnd(ctx->scatterV,ctx->V,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 143*c4762a1bSJed Brown ierr = (*ctx->f)(t,ctx->UV,F);CHKERRQ(ierr); 144*c4762a1bSJed Brown PetscFunctionReturn(0); 145*c4762a1bSJed Brown } 146*c4762a1bSJed Brown 147*c4762a1bSJed Brown /* 148*c4762a1bSJed Brown Defines the nonlinear function that is passed to the nonlinear solver 149*c4762a1bSJed Brown 150*c4762a1bSJed Brown */ 151*c4762a1bSJed Brown PetscErrorCode SNESFunction(SNES snes,Vec V,Vec F,void *actx) 152*c4762a1bSJed Brown { 153*c4762a1bSJed Brown AppCtx *ctx = (AppCtx*)actx; 154*c4762a1bSJed Brown PetscErrorCode ierr; 155*c4762a1bSJed Brown 156*c4762a1bSJed Brown PetscFunctionBeginUser; 157*c4762a1bSJed Brown ierr = VecScatterBegin(ctx->scatterV,V,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 158*c4762a1bSJed Brown ierr = VecScatterEnd(ctx->scatterV,V,ctx->UV,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 159*c4762a1bSJed Brown ierr = (*ctx->F)(ctx->t,ctx->UV,F);CHKERRQ(ierr); 160*c4762a1bSJed Brown PetscFunctionReturn(0); 161*c4762a1bSJed Brown } 162*c4762a1bSJed Brown 163*c4762a1bSJed Brown 164