1c4762a1bSJed Brown 2c4762a1bSJed Brown static char help[] = "Solves the time independent Bratu problem using pseudo-timestepping."; 3c4762a1bSJed Brown 4c4762a1bSJed Brown /* ------------------------------------------------------------------------ 5c4762a1bSJed Brown 6c4762a1bSJed Brown This code demonstrates how one may solve a nonlinear problem 7c4762a1bSJed Brown with pseudo-timestepping. In this simple example, the pseudo-timestep 8c4762a1bSJed Brown is the same for all grid points, i.e., this is equivalent to using 9c4762a1bSJed Brown the backward Euler method with a variable timestep. 10c4762a1bSJed Brown 11c4762a1bSJed Brown Note: This example does not require pseudo-timestepping since it 12c4762a1bSJed Brown is an easy nonlinear problem, but it is included to demonstrate how 13c4762a1bSJed Brown the pseudo-timestepping may be done. 14c4762a1bSJed Brown 15c4762a1bSJed Brown See snes/tutorials/ex4.c[ex4f.F] and 16c4762a1bSJed Brown snes/tutorials/ex5.c[ex5f.F] where the problem is described 17c4762a1bSJed Brown and solved using Newton's method alone. 18c4762a1bSJed Brown 19c4762a1bSJed Brown ----------------------------------------------------------------------------- */ 20c4762a1bSJed Brown /* 21c4762a1bSJed Brown Include "petscts.h" to use the PETSc timestepping routines. Note that 22c4762a1bSJed Brown this file automatically includes "petscsys.h" and other lower-level 23c4762a1bSJed Brown PETSc include files. 24c4762a1bSJed Brown */ 25c4762a1bSJed Brown #include <petscts.h> 26c4762a1bSJed Brown 27c4762a1bSJed Brown /* 28c4762a1bSJed Brown Create an application context to contain data needed by the 29c4762a1bSJed Brown application-provided call-back routines, FormJacobian() and 30c4762a1bSJed Brown FormFunction(). 31c4762a1bSJed Brown */ 32c4762a1bSJed Brown typedef struct { 33c4762a1bSJed Brown PetscReal param; /* test problem parameter */ 34c4762a1bSJed Brown PetscInt mx; /* Discretization in x-direction */ 35c4762a1bSJed Brown PetscInt my; /* Discretization in y-direction */ 36c4762a1bSJed Brown } AppCtx; 37c4762a1bSJed Brown 38c4762a1bSJed Brown /* 39c4762a1bSJed Brown User-defined routines 40c4762a1bSJed Brown */ 41c4762a1bSJed Brown extern PetscErrorCode FormJacobian(TS, PetscReal, Vec, Mat, Mat, void *), FormFunction(TS, PetscReal, Vec, Vec, void *), FormInitialGuess(Vec, AppCtx *); 42c4762a1bSJed Brown 43*9371c9d4SSatish Balay int main(int argc, char **argv) { 44c4762a1bSJed Brown TS ts; /* timestepping context */ 45c4762a1bSJed Brown Vec x, r; /* solution, residual vectors */ 46c4762a1bSJed Brown Mat J; /* Jacobian matrix */ 47c4762a1bSJed Brown AppCtx user; /* user-defined work context */ 48c4762a1bSJed Brown PetscInt its, N; /* iterations for convergence */ 49c4762a1bSJed Brown PetscReal param_max = 6.81, param_min = 0., dt; 50c4762a1bSJed Brown PetscReal ftime; 51c4762a1bSJed Brown PetscMPIInt size; 52c4762a1bSJed Brown 53327415f7SBarry Smith PetscFunctionBeginUser; 549566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 559566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size)); 563c633725SBarry Smith PetscCheck(size == 1, PETSC_COMM_WORLD, PETSC_ERR_WRONG_MPI_SIZE, "This is a uniprocessor example only"); 57c4762a1bSJed Brown 58c4762a1bSJed Brown user.mx = 4; 59c4762a1bSJed Brown user.my = 4; 60c4762a1bSJed Brown user.param = 6.0; 61c4762a1bSJed Brown 62c4762a1bSJed Brown /* 63c4762a1bSJed Brown Allow user to set the grid dimensions and nonlinearity parameter at run-time 64c4762a1bSJed Brown */ 65c4762a1bSJed Brown PetscOptionsGetInt(NULL, NULL, "-mx", &user.mx, NULL); 66c4762a1bSJed Brown PetscOptionsGetInt(NULL, NULL, "-my", &user.my, NULL); 67c4762a1bSJed Brown N = user.mx * user.my; 68c4762a1bSJed Brown dt = .5 / PetscMax(user.mx, user.my); 69c4762a1bSJed Brown PetscOptionsGetReal(NULL, NULL, "-param", &user.param, NULL); 703c633725SBarry Smith PetscCheck(user.param < param_max && user.param >= param_min, PETSC_COMM_WORLD, PETSC_ERR_ARG_OUTOFRANGE, "Parameter is out of range"); 71c4762a1bSJed Brown 72c4762a1bSJed Brown /* 73c4762a1bSJed Brown Create vectors to hold the solution and function value 74c4762a1bSJed Brown */ 759566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, N, &x)); 769566063dSJacob Faibussowitsch PetscCall(VecDuplicate(x, &r)); 77c4762a1bSJed Brown 78c4762a1bSJed Brown /* 79c4762a1bSJed Brown Create matrix to hold Jacobian. Preallocate 5 nonzeros per row 80c4762a1bSJed Brown in the sparse matrix. Note that this is not the optimal strategy; see 81c4762a1bSJed Brown the Performance chapter of the users manual for information on 82c4762a1bSJed Brown preallocating memory in sparse matrices. 83c4762a1bSJed Brown */ 849566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJ(PETSC_COMM_SELF, N, N, 5, 0, &J)); 85c4762a1bSJed Brown 86c4762a1bSJed Brown /* 87c4762a1bSJed Brown Create timestepper context 88c4762a1bSJed Brown */ 899566063dSJacob Faibussowitsch PetscCall(TSCreate(PETSC_COMM_WORLD, &ts)); 909566063dSJacob Faibussowitsch PetscCall(TSSetProblemType(ts, TS_NONLINEAR)); 91c4762a1bSJed Brown 92c4762a1bSJed Brown /* 93c4762a1bSJed Brown Tell the timestepper context where to compute solutions 94c4762a1bSJed Brown */ 959566063dSJacob Faibussowitsch PetscCall(TSSetSolution(ts, x)); 96c4762a1bSJed Brown 97c4762a1bSJed Brown /* 98c4762a1bSJed Brown Provide the call-back for the nonlinear function we are 99c4762a1bSJed Brown evaluating. Thus whenever the timestepping routines need the 100c4762a1bSJed Brown function they will call this routine. Note the final argument 101c4762a1bSJed Brown is the application context used by the call-back functions. 102c4762a1bSJed Brown */ 1039566063dSJacob Faibussowitsch PetscCall(TSSetRHSFunction(ts, NULL, FormFunction, &user)); 104c4762a1bSJed Brown 105c4762a1bSJed Brown /* 106c4762a1bSJed Brown Set the Jacobian matrix and the function used to compute 107c4762a1bSJed Brown Jacobians. 108c4762a1bSJed Brown */ 1099566063dSJacob Faibussowitsch PetscCall(TSSetRHSJacobian(ts, J, J, FormJacobian, &user)); 110c4762a1bSJed Brown 111c4762a1bSJed Brown /* 112c4762a1bSJed Brown Form the initial guess for the problem 113c4762a1bSJed Brown */ 1149566063dSJacob Faibussowitsch PetscCall(FormInitialGuess(x, &user)); 115c4762a1bSJed Brown 116c4762a1bSJed Brown /* 117c4762a1bSJed Brown This indicates that we are using pseudo timestepping to 118c4762a1bSJed Brown find a steady state solution to the nonlinear problem. 119c4762a1bSJed Brown */ 1209566063dSJacob Faibussowitsch PetscCall(TSSetType(ts, TSPSEUDO)); 121c4762a1bSJed Brown 122c4762a1bSJed Brown /* 123c4762a1bSJed Brown Set the initial time to start at (this is arbitrary for 124c4762a1bSJed Brown steady state problems); and the initial timestep given above 125c4762a1bSJed Brown */ 1269566063dSJacob Faibussowitsch PetscCall(TSSetTimeStep(ts, dt)); 127c4762a1bSJed Brown 128c4762a1bSJed Brown /* 129c4762a1bSJed Brown Set a large number of timesteps and final duration time 130c4762a1bSJed Brown to insure convergence to steady state. 131c4762a1bSJed Brown */ 1329566063dSJacob Faibussowitsch PetscCall(TSSetMaxSteps(ts, 10000)); 1339566063dSJacob Faibussowitsch PetscCall(TSSetMaxTime(ts, 1e12)); 1349566063dSJacob Faibussowitsch PetscCall(TSSetExactFinalTime(ts, TS_EXACTFINALTIME_STEPOVER)); 135c4762a1bSJed Brown 136c4762a1bSJed Brown /* 137c4762a1bSJed Brown Use the default strategy for increasing the timestep 138c4762a1bSJed Brown */ 1399566063dSJacob Faibussowitsch PetscCall(TSPseudoSetTimeStep(ts, TSPseudoTimeStepDefault, 0)); 140c4762a1bSJed Brown 141c4762a1bSJed Brown /* 142c4762a1bSJed Brown Set any additional options from the options database. This 143c4762a1bSJed Brown includes all options for the nonlinear and linear solvers used 144c4762a1bSJed Brown internally the timestepping routines. 145c4762a1bSJed Brown */ 1469566063dSJacob Faibussowitsch PetscCall(TSSetFromOptions(ts)); 147c4762a1bSJed Brown 1489566063dSJacob Faibussowitsch PetscCall(TSSetUp(ts)); 149c4762a1bSJed Brown 150c4762a1bSJed Brown /* 151c4762a1bSJed Brown Perform the solve. This is where the timestepping takes place. 152c4762a1bSJed Brown */ 1539566063dSJacob Faibussowitsch PetscCall(TSSolve(ts, x)); 1549566063dSJacob Faibussowitsch PetscCall(TSGetSolveTime(ts, &ftime)); 155c4762a1bSJed Brown 156c4762a1bSJed Brown /* 157c4762a1bSJed Brown Get the number of steps 158c4762a1bSJed Brown */ 1599566063dSJacob Faibussowitsch PetscCall(TSGetStepNumber(ts, &its)); 160c4762a1bSJed Brown 16163a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "Number of pseudo timesteps = %" PetscInt_FMT " final time %4.2e\n", its, (double)ftime)); 162c4762a1bSJed Brown 163c4762a1bSJed Brown /* 164c4762a1bSJed Brown Free the data structures constructed above 165c4762a1bSJed Brown */ 1669566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 1679566063dSJacob Faibussowitsch PetscCall(VecDestroy(&r)); 1689566063dSJacob Faibussowitsch PetscCall(MatDestroy(&J)); 1699566063dSJacob Faibussowitsch PetscCall(TSDestroy(&ts)); 1709566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 171b122ec5aSJacob Faibussowitsch return 0; 172c4762a1bSJed Brown } 173c4762a1bSJed Brown /* ------------------------------------------------------------------ */ 174c4762a1bSJed Brown /* Bratu (Solid Fuel Ignition) Test Problem */ 175c4762a1bSJed Brown /* ------------------------------------------------------------------ */ 176c4762a1bSJed Brown 177c4762a1bSJed Brown /* -------------------- Form initial approximation ----------------- */ 178c4762a1bSJed Brown 179*9371c9d4SSatish Balay PetscErrorCode FormInitialGuess(Vec X, AppCtx *user) { 180c4762a1bSJed Brown PetscInt i, j, row, mx, my; 181c4762a1bSJed Brown PetscReal one = 1.0, lambda; 182c4762a1bSJed Brown PetscReal temp1, temp, hx, hy; 183c4762a1bSJed Brown PetscScalar *x; 184c4762a1bSJed Brown 185c4762a1bSJed Brown mx = user->mx; 186c4762a1bSJed Brown my = user->my; 187c4762a1bSJed Brown lambda = user->param; 188c4762a1bSJed Brown 189c4762a1bSJed Brown hx = one / (PetscReal)(mx - 1); 190c4762a1bSJed Brown hy = one / (PetscReal)(my - 1); 191c4762a1bSJed Brown 1929566063dSJacob Faibussowitsch PetscCall(VecGetArray(X, &x)); 193c4762a1bSJed Brown temp1 = lambda / (lambda + one); 194c4762a1bSJed Brown for (j = 0; j < my; j++) { 195c4762a1bSJed Brown temp = (PetscReal)(PetscMin(j, my - j - 1)) * hy; 196c4762a1bSJed Brown for (i = 0; i < mx; i++) { 197c4762a1bSJed Brown row = i + j * mx; 198c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx - 1 || j == my - 1) { 199c4762a1bSJed Brown x[row] = 0.0; 200c4762a1bSJed Brown continue; 201c4762a1bSJed Brown } 202c4762a1bSJed Brown x[row] = temp1 * PetscSqrtReal(PetscMin((PetscReal)(PetscMin(i, mx - i - 1)) * hx, temp)); 203c4762a1bSJed Brown } 204c4762a1bSJed Brown } 2059566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(X, &x)); 206c4762a1bSJed Brown return 0; 207c4762a1bSJed Brown } 208c4762a1bSJed Brown /* -------------------- Evaluate Function F(x) --------------------- */ 209c4762a1bSJed Brown 210*9371c9d4SSatish Balay PetscErrorCode FormFunction(TS ts, PetscReal t, Vec X, Vec F, void *ptr) { 211c4762a1bSJed Brown AppCtx *user = (AppCtx *)ptr; 212c4762a1bSJed Brown PetscInt i, j, row, mx, my; 213c4762a1bSJed Brown PetscReal two = 2.0, one = 1.0, lambda; 214c4762a1bSJed Brown PetscReal hx, hy, hxdhy, hydhx; 215c4762a1bSJed Brown PetscScalar ut, ub, ul, ur, u, uxx, uyy, sc, *f; 216c4762a1bSJed Brown const PetscScalar *x; 217c4762a1bSJed Brown 218c4762a1bSJed Brown mx = user->mx; 219c4762a1bSJed Brown my = user->my; 220c4762a1bSJed Brown lambda = user->param; 221c4762a1bSJed Brown 222c4762a1bSJed Brown hx = one / (PetscReal)(mx - 1); 223c4762a1bSJed Brown hy = one / (PetscReal)(my - 1); 224c4762a1bSJed Brown sc = hx * hy; 225c4762a1bSJed Brown hxdhy = hx / hy; 226c4762a1bSJed Brown hydhx = hy / hx; 227c4762a1bSJed Brown 2289566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(X, &x)); 2299566063dSJacob Faibussowitsch PetscCall(VecGetArray(F, &f)); 230c4762a1bSJed Brown for (j = 0; j < my; j++) { 231c4762a1bSJed Brown for (i = 0; i < mx; i++) { 232c4762a1bSJed Brown row = i + j * mx; 233c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx - 1 || j == my - 1) { 234c4762a1bSJed Brown f[row] = x[row]; 235c4762a1bSJed Brown continue; 236c4762a1bSJed Brown } 237c4762a1bSJed Brown u = x[row]; 238c4762a1bSJed Brown ub = x[row - mx]; 239c4762a1bSJed Brown ul = x[row - 1]; 240c4762a1bSJed Brown ut = x[row + mx]; 241c4762a1bSJed Brown ur = x[row + 1]; 242c4762a1bSJed Brown uxx = (-ur + two * u - ul) * hydhx; 243c4762a1bSJed Brown uyy = (-ut + two * u - ub) * hxdhy; 244c4762a1bSJed Brown f[row] = -uxx + -uyy + sc * lambda * PetscExpScalar(u); 245c4762a1bSJed Brown } 246c4762a1bSJed Brown } 2479566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(X, &x)); 2489566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(F, &f)); 249c4762a1bSJed Brown return 0; 250c4762a1bSJed Brown } 251c4762a1bSJed Brown /* -------------------- Evaluate Jacobian F'(x) -------------------- */ 252c4762a1bSJed Brown 253c4762a1bSJed Brown /* 254c4762a1bSJed Brown Calculate the Jacobian matrix J(X,t). 255c4762a1bSJed Brown 256c4762a1bSJed Brown Note: We put the Jacobian in the preconditioner storage B instead of J. This 257c4762a1bSJed Brown way we can give the -snes_mf_operator flag to check our work. This replaces 258c4762a1bSJed Brown J with a finite difference approximation, using our analytic Jacobian B for 259c4762a1bSJed Brown the preconditioner. 260c4762a1bSJed Brown */ 261*9371c9d4SSatish Balay PetscErrorCode FormJacobian(TS ts, PetscReal t, Vec X, Mat J, Mat B, void *ptr) { 262c4762a1bSJed Brown AppCtx *user = (AppCtx *)ptr; 263c4762a1bSJed Brown PetscInt i, j, row, mx, my, col[5]; 264c4762a1bSJed Brown PetscScalar two = 2.0, one = 1.0, lambda, v[5], sc; 265c4762a1bSJed Brown const PetscScalar *x; 266c4762a1bSJed Brown PetscReal hx, hy, hxdhy, hydhx; 267c4762a1bSJed Brown 268c4762a1bSJed Brown mx = user->mx; 269c4762a1bSJed Brown my = user->my; 270c4762a1bSJed Brown lambda = user->param; 271c4762a1bSJed Brown 272c4762a1bSJed Brown hx = 1.0 / (PetscReal)(mx - 1); 273c4762a1bSJed Brown hy = 1.0 / (PetscReal)(my - 1); 274c4762a1bSJed Brown sc = hx * hy; 275c4762a1bSJed Brown hxdhy = hx / hy; 276c4762a1bSJed Brown hydhx = hy / hx; 277c4762a1bSJed Brown 2789566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(X, &x)); 279c4762a1bSJed Brown for (j = 0; j < my; j++) { 280c4762a1bSJed Brown for (i = 0; i < mx; i++) { 281c4762a1bSJed Brown row = i + j * mx; 282c4762a1bSJed Brown if (i == 0 || j == 0 || i == mx - 1 || j == my - 1) { 2839566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &row, 1, &row, &one, INSERT_VALUES)); 284c4762a1bSJed Brown continue; 285c4762a1bSJed Brown } 286*9371c9d4SSatish Balay v[0] = hxdhy; 287*9371c9d4SSatish Balay col[0] = row - mx; 288*9371c9d4SSatish Balay v[1] = hydhx; 289*9371c9d4SSatish Balay col[1] = row - 1; 290*9371c9d4SSatish Balay v[2] = -two * (hydhx + hxdhy) + sc * lambda * PetscExpScalar(x[row]); 291*9371c9d4SSatish Balay col[2] = row; 292*9371c9d4SSatish Balay v[3] = hydhx; 293*9371c9d4SSatish Balay col[3] = row + 1; 294*9371c9d4SSatish Balay v[4] = hxdhy; 295*9371c9d4SSatish Balay col[4] = row + mx; 2969566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &row, 5, col, v, INSERT_VALUES)); 297c4762a1bSJed Brown } 298c4762a1bSJed Brown } 2999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(X, &x)); 3009566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 3019566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 302c4762a1bSJed Brown if (J != B) { 3039566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(J, MAT_FINAL_ASSEMBLY)); 3049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(J, MAT_FINAL_ASSEMBLY)); 305c4762a1bSJed Brown } 306c4762a1bSJed Brown return 0; 307c4762a1bSJed Brown } 308c4762a1bSJed Brown 309c4762a1bSJed Brown /*TEST 310c4762a1bSJed Brown 311c4762a1bSJed Brown test: 312c4762a1bSJed Brown args: -ksp_gmres_cgs_refinement_type refine_always -snes_type newtonls -ts_monitor_pseudo -snes_atol 1.e-7 -ts_pseudo_frtol 1.e-5 -ts_view draw:tikz:fig.tex 313c4762a1bSJed Brown 314c4762a1bSJed Brown test: 315c4762a1bSJed Brown suffix: 2 316c4762a1bSJed Brown args: -ts_monitor_pseudo -ts_pseudo_frtol 1.e-5 317c4762a1bSJed Brown 318c4762a1bSJed Brown TEST*/ 319