xref: /petsc/src/ts/tutorials/hybrid/ex1adj.c (revision 606c028001d6169ccbb8dc4a5aa61aa3bda31a09)
1c4762a1bSJed Brown static char help[] = "Adjoint sensitivity of a hybrid system with state-dependent switchings.\n";
2c4762a1bSJed Brown 
3c4762a1bSJed Brown /*
4c4762a1bSJed Brown   The dynamics is described by the ODE
5c4762a1bSJed Brown                   u_t = A_i u
6c4762a1bSJed Brown 
7c4762a1bSJed Brown   where A_1 = [ 1  -100
8c4762a1bSJed Brown                 10  1  ],
9c4762a1bSJed Brown         A_2 = [ 1    10
10c4762a1bSJed Brown                -100  1 ].
11c4762a1bSJed Brown   The index i changes from 1 to 2 when u[1]=2.75u[0] and from 2 to 1 when u[1]=0.36u[0].
12c4762a1bSJed Brown   Initially u=[0 1]^T and i=1.
13c4762a1bSJed Brown 
14c4762a1bSJed Brown   References:
15*606c0280SSatish Balay + * - H. Zhang, S. Abhyankar, E. Constantinescu, M. Mihai, Discrete Adjoint Sensitivity Analysis of Hybrid Dynamical Systems With Switching, IEEE Transactions on Circuits and Systems I: Regular Papers, 64(5), May 2017
16*606c0280SSatish Balay - * - I. A. Hiskens, M.A. Pai, Trajectory Sensitivity Analysis of Hybrid Systems, IEEE Transactions on Circuits and Systems, Vol 47, No 2, February 2000
17c4762a1bSJed Brown */
18c4762a1bSJed Brown 
19c4762a1bSJed Brown #include <petscts.h>
20c4762a1bSJed Brown 
21c4762a1bSJed Brown typedef struct {
22c4762a1bSJed Brown   PetscScalar lambda1;
23c4762a1bSJed Brown   PetscScalar lambda2;
24c4762a1bSJed Brown   PetscInt    mode;  /* mode flag*/
25c4762a1bSJed Brown } AppCtx;
26c4762a1bSJed Brown 
27c4762a1bSJed Brown PetscErrorCode EventFunction(TS ts,PetscReal t,Vec U,PetscScalar *fvalue,void *ctx)
28c4762a1bSJed Brown {
29c4762a1bSJed Brown   AppCtx            *actx=(AppCtx*)ctx;
30c4762a1bSJed Brown   PetscErrorCode    ierr;
31c4762a1bSJed Brown   const PetscScalar *u;
32c4762a1bSJed Brown 
33c4762a1bSJed Brown   PetscFunctionBegin;
34c4762a1bSJed Brown   ierr = VecGetArrayRead(U,&u);CHKERRQ(ierr);
35c4762a1bSJed Brown   if (actx->mode == 1) {
36c4762a1bSJed Brown     fvalue[0] = u[1]-actx->lambda1*u[0];
37c4762a1bSJed Brown   }else if (actx->mode == 2) {
38c4762a1bSJed Brown     fvalue[0] = u[1]-actx->lambda2*u[0];
39c4762a1bSJed Brown   }
40c4762a1bSJed Brown   ierr = VecRestoreArrayRead(U,&u);CHKERRQ(ierr);
41c4762a1bSJed Brown   PetscFunctionReturn(0);
42c4762a1bSJed Brown }
43c4762a1bSJed Brown 
44c4762a1bSJed Brown PetscErrorCode ShiftGradients(TS ts,Vec U,AppCtx *actx)
45c4762a1bSJed Brown {
46c4762a1bSJed Brown   Vec               *lambda,*mu;
47c4762a1bSJed Brown   PetscScalar       *x,*y;
48c4762a1bSJed Brown   const PetscScalar *u;
49c4762a1bSJed Brown   PetscErrorCode    ierr;
50c4762a1bSJed Brown   PetscScalar       tmp[2],A1[2][2],A2[2],denorm;
51c4762a1bSJed Brown   PetscInt          numcost;
52c4762a1bSJed Brown 
53c4762a1bSJed Brown   PetscFunctionBegin;
54c4762a1bSJed Brown   ierr = TSGetCostGradients(ts,&numcost,&lambda,&mu);CHKERRQ(ierr);
55c4762a1bSJed Brown   ierr = VecGetArrayRead(U,&u);CHKERRQ(ierr);
56c4762a1bSJed Brown 
57c4762a1bSJed Brown   if (actx->mode==2) {
58c4762a1bSJed Brown     denorm = -actx->lambda1*(u[0]-100.*u[1])+1.*(10.*u[0]+u[1]);
59c4762a1bSJed Brown     A1[0][0] = 110.*u[1]*(-actx->lambda1)/denorm+1.;
60c4762a1bSJed Brown     A1[0][1] = -110.*u[0]*(-actx->lambda1)/denorm;
61c4762a1bSJed Brown     A1[1][0] = 110.*u[1]*1./denorm;
62c4762a1bSJed Brown     A1[1][1] = -110.*u[0]*1./denorm+1.;
63c4762a1bSJed Brown 
64c4762a1bSJed Brown     A2[0] = 110.*u[1]*(-u[0])/denorm;
65c4762a1bSJed Brown     A2[1] = -110.*u[0]*(-u[0])/denorm;
66c4762a1bSJed Brown   } else {
67c4762a1bSJed Brown     denorm = -actx->lambda2*(u[0]+10.*u[1])+1.*(-100.*u[0]+u[1]);
68c4762a1bSJed Brown     A1[0][0] = 110.*u[1]*(actx->lambda2)/denorm+1;
69c4762a1bSJed Brown     A1[0][1] = -110.*u[0]*(actx->lambda2)/denorm;
70c4762a1bSJed Brown     A1[1][0] = -110.*u[1]*1./denorm;
71c4762a1bSJed Brown     A1[1][1] = 110.*u[0]*1./denorm+1.;
72c4762a1bSJed Brown 
73c4762a1bSJed Brown     A2[0] = 0;
74c4762a1bSJed Brown     A2[1] = 0;
75c4762a1bSJed Brown   }
76c4762a1bSJed Brown 
77c4762a1bSJed Brown   ierr = VecRestoreArrayRead(U,&u);CHKERRQ(ierr);
78c4762a1bSJed Brown 
79c4762a1bSJed Brown   ierr   = VecGetArray(lambda[0],&x);CHKERRQ(ierr);
80c4762a1bSJed Brown   ierr   = VecGetArray(mu[0],&y);CHKERRQ(ierr);
81c4762a1bSJed Brown   tmp[0] = A1[0][0]*x[0]+A1[0][1]*x[1];
82c4762a1bSJed Brown   tmp[1] = A1[1][0]*x[0]+A1[1][1]*x[1];
83c4762a1bSJed Brown   y[0]   = y[0] + A2[0]*x[0]+A2[1]*x[1];
84c4762a1bSJed Brown   x[0]   = tmp[0];
85c4762a1bSJed Brown   x[1]   = tmp[1];
86c4762a1bSJed Brown   ierr   = VecRestoreArray(mu[0],&y);CHKERRQ(ierr);
87c4762a1bSJed Brown   ierr   = VecRestoreArray(lambda[0],&x);CHKERRQ(ierr);
88c4762a1bSJed Brown 
89c4762a1bSJed Brown   ierr   = VecGetArray(lambda[1],&x);CHKERRQ(ierr);
90c4762a1bSJed Brown   ierr   = VecGetArray(mu[1],&y);CHKERRQ(ierr);
91c4762a1bSJed Brown   tmp[0] = A1[0][0]*x[0]+A1[0][1]*x[1];
92c4762a1bSJed Brown   tmp[1] = A1[1][0]*x[0]+A1[1][1]*x[1];
93c4762a1bSJed Brown   y[0]   = y[0] + A2[0]*x[0]+A2[1]*x[1];
94c4762a1bSJed Brown   x[0]   = tmp[0];
95c4762a1bSJed Brown   x[1]   = tmp[1];
96c4762a1bSJed Brown   ierr   = VecRestoreArray(mu[1],&y);CHKERRQ(ierr);
97c4762a1bSJed Brown   ierr   = VecRestoreArray(lambda[1],&x);CHKERRQ(ierr);
98c4762a1bSJed Brown   PetscFunctionReturn(0);
99c4762a1bSJed Brown }
100c4762a1bSJed Brown 
101c4762a1bSJed Brown PetscErrorCode PostEventFunction(TS ts,PetscInt nevents,PetscInt event_list[],PetscReal t,Vec U,PetscBool forwardsolve,void* ctx)
102c4762a1bSJed Brown {
103c4762a1bSJed Brown   AppCtx         *actx=(AppCtx*)ctx;
104c4762a1bSJed Brown   PetscErrorCode ierr;
105c4762a1bSJed Brown 
106c4762a1bSJed Brown   PetscFunctionBegin;
107c4762a1bSJed Brown   /* ierr = VecView(U,PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr); */
108c4762a1bSJed Brown   if (!forwardsolve) {
109c4762a1bSJed Brown     ierr = ShiftGradients(ts,U,actx);CHKERRQ(ierr);
110c4762a1bSJed Brown   }
111c4762a1bSJed Brown   if (actx->mode == 1) {
112c4762a1bSJed Brown     actx->mode = 2;
113c4762a1bSJed Brown     /* ierr = PetscPrintf(PETSC_COMM_SELF,"Change from mode 1 to 2 at t = %f \n",(double)t);CHKERRQ(ierr); */
114c4762a1bSJed Brown   } else if (actx->mode == 2) {
115c4762a1bSJed Brown     actx->mode = 1;
116c4762a1bSJed Brown     /* ierr = PetscPrintf(PETSC_COMM_SELF,"Change from mode 2 to 1 at t = %f \n",(double)t);CHKERRQ(ierr); */
117c4762a1bSJed Brown   }
118c4762a1bSJed Brown   PetscFunctionReturn(0);
119c4762a1bSJed Brown }
120c4762a1bSJed Brown 
121c4762a1bSJed Brown /*
122c4762a1bSJed Brown      Defines the ODE passed to the ODE solver
123c4762a1bSJed Brown */
124c4762a1bSJed Brown static PetscErrorCode IFunction(TS ts,PetscReal t,Vec U,Vec Udot,Vec F,void *ctx)
125c4762a1bSJed Brown {
126c4762a1bSJed Brown   AppCtx            *actx=(AppCtx*)ctx;
127c4762a1bSJed Brown   PetscErrorCode    ierr;
128c4762a1bSJed Brown   PetscScalar       *f;
129c4762a1bSJed Brown   const PetscScalar *u,*udot;
130c4762a1bSJed Brown 
131c4762a1bSJed Brown   PetscFunctionBegin;
132c4762a1bSJed Brown   /*  The next three lines allow us to access the entries of the vectors directly */
133c4762a1bSJed Brown   ierr = VecGetArrayRead(U,&u);CHKERRQ(ierr);
134c4762a1bSJed Brown   ierr = VecGetArrayRead(Udot,&udot);CHKERRQ(ierr);
135c4762a1bSJed Brown   ierr = VecGetArray(F,&f);CHKERRQ(ierr);
136c4762a1bSJed Brown 
137c4762a1bSJed Brown   if (actx->mode == 1) {
138c4762a1bSJed Brown     f[0] = udot[0]-u[0]+100*u[1];
139c4762a1bSJed Brown     f[1] = udot[1]-10*u[0]-u[1];
140c4762a1bSJed Brown   } else if (actx->mode == 2) {
141c4762a1bSJed Brown     f[0] = udot[0]-u[0]-10*u[1];
142c4762a1bSJed Brown     f[1] = udot[1]+100*u[0]-u[1];
143c4762a1bSJed Brown   }
144c4762a1bSJed Brown 
145c4762a1bSJed Brown   ierr = VecRestoreArrayRead(U,&u);CHKERRQ(ierr);
146c4762a1bSJed Brown   ierr = VecRestoreArrayRead(Udot,&udot);CHKERRQ(ierr);
147c4762a1bSJed Brown   ierr = VecRestoreArray(F,&f);CHKERRQ(ierr);
148c4762a1bSJed Brown   PetscFunctionReturn(0);
149c4762a1bSJed Brown }
150c4762a1bSJed Brown 
151c4762a1bSJed Brown /*
152c4762a1bSJed Brown      Defines the Jacobian of the ODE passed to the ODE solver. See TSSetIJacobian() for the meaning of a and the Jacobian.
153c4762a1bSJed Brown */
154c4762a1bSJed Brown static PetscErrorCode IJacobian(TS ts,PetscReal t,Vec U,Vec Udot,PetscReal a,Mat A,Mat B,void *ctx)
155c4762a1bSJed Brown {
156c4762a1bSJed Brown   AppCtx            *actx=(AppCtx*)ctx;
157c4762a1bSJed Brown   PetscErrorCode    ierr;
158c4762a1bSJed Brown   PetscInt          rowcol[] = {0,1};
159c4762a1bSJed Brown   PetscScalar       J[2][2];
160c4762a1bSJed Brown   const PetscScalar *u,*udot;
161c4762a1bSJed Brown 
162c4762a1bSJed Brown   PetscFunctionBegin;
163c4762a1bSJed Brown   ierr = VecGetArrayRead(U,&u);CHKERRQ(ierr);
164c4762a1bSJed Brown   ierr = VecGetArrayRead(Udot,&udot);CHKERRQ(ierr);
165c4762a1bSJed Brown 
166c4762a1bSJed Brown   if (actx->mode == 1) {
167c4762a1bSJed Brown     J[0][0] = a-1;                       J[0][1] = 100;
168c4762a1bSJed Brown     J[1][0] = -10;                       J[1][1] = a-1;
169c4762a1bSJed Brown   } else if (actx->mode == 2) {
170c4762a1bSJed Brown     J[0][0] = a-1;                       J[0][1] = -10;
171c4762a1bSJed Brown     J[1][0] = 100;                       J[1][1] = a-1;
172c4762a1bSJed Brown   }
173c4762a1bSJed Brown   ierr = MatSetValues(B,2,rowcol,2,rowcol,&J[0][0],INSERT_VALUES);CHKERRQ(ierr);
174c4762a1bSJed Brown 
175c4762a1bSJed Brown   ierr = VecRestoreArrayRead(U,&u);CHKERRQ(ierr);
176c4762a1bSJed Brown   ierr = VecRestoreArrayRead(Udot,&udot);CHKERRQ(ierr);
177c4762a1bSJed Brown 
178c4762a1bSJed Brown   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
179c4762a1bSJed Brown   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
180c4762a1bSJed Brown   if (A != B) {
181c4762a1bSJed Brown     ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
182c4762a1bSJed Brown     ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
183c4762a1bSJed Brown   }
184c4762a1bSJed Brown   PetscFunctionReturn(0);
185c4762a1bSJed Brown }
186c4762a1bSJed Brown 
187c4762a1bSJed Brown /* Matrix JacobianP is constant so that it only needs to be evaluated once */
188c4762a1bSJed Brown static PetscErrorCode RHSJacobianP(TS ts,PetscReal t,Vec X,Mat A, void *ctx)
189c4762a1bSJed Brown {
190c4762a1bSJed Brown   PetscFunctionBeginUser;
191c4762a1bSJed Brown   PetscFunctionReturn(0);
192c4762a1bSJed Brown }
193c4762a1bSJed Brown 
194c4762a1bSJed Brown int main(int argc,char **argv)
195c4762a1bSJed Brown {
196c4762a1bSJed Brown   TS             ts;            /* ODE integrator */
197c4762a1bSJed Brown   Vec            U;             /* solution will be stored here */
198c4762a1bSJed Brown   Mat            A;             /* Jacobian matrix */
199c4762a1bSJed Brown   Mat            Ap;            /* dfdp */
200c4762a1bSJed Brown   PetscErrorCode ierr;
201c4762a1bSJed Brown   PetscMPIInt    size;
202c4762a1bSJed Brown   PetscInt       n = 2;
203c4762a1bSJed Brown   PetscScalar    *u,*v;
204c4762a1bSJed Brown   AppCtx         app;
205c4762a1bSJed Brown   PetscInt       direction[1];
206c4762a1bSJed Brown   PetscBool      terminate[1];
207c4762a1bSJed Brown   Vec            lambda[2],mu[2];
208c4762a1bSJed Brown   PetscReal      tend;
209c4762a1bSJed Brown 
210c4762a1bSJed Brown   FILE           *f;
211c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
212c4762a1bSJed Brown      Initialize program
213c4762a1bSJed Brown      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
214c4762a1bSJed Brown   ierr = PetscInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr;
215ffc4695bSBarry Smith   ierr = MPI_Comm_size(PETSC_COMM_WORLD,&size);CHKERRMPI(ierr);
2162c71b3e2SJacob Faibussowitsch   PetscCheckFalse(size > 1,PETSC_COMM_WORLD,PETSC_ERR_SUP,"Only for sequential runs");
217c4762a1bSJed Brown   app.mode = 1;
218c4762a1bSJed Brown   app.lambda1 = 2.75;
219c4762a1bSJed Brown   app.lambda2 = 0.36;
220c4762a1bSJed Brown   tend = 0.125;
221c4762a1bSJed Brown   ierr = PetscOptionsBegin(PETSC_COMM_WORLD,NULL,"ex1adj options","");CHKERRQ(ierr);
222c4762a1bSJed Brown   {
223c4762a1bSJed Brown     ierr = PetscOptionsReal("-lambda1","","",app.lambda1,&app.lambda1,NULL);CHKERRQ(ierr);
224c4762a1bSJed Brown     ierr = PetscOptionsReal("-lambda2","","",app.lambda2,&app.lambda2,NULL);CHKERRQ(ierr);
225c4762a1bSJed Brown     ierr = PetscOptionsReal("-tend","","",tend,&tend,NULL);CHKERRQ(ierr);
226c4762a1bSJed Brown   }
227c4762a1bSJed Brown   ierr = PetscOptionsEnd();CHKERRQ(ierr);
228c4762a1bSJed Brown 
229c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
230c4762a1bSJed Brown     Create necessary matrix and vectors
231c4762a1bSJed Brown     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
232c4762a1bSJed Brown   ierr = MatCreate(PETSC_COMM_WORLD,&A);CHKERRQ(ierr);
233c4762a1bSJed Brown   ierr = MatSetSizes(A,n,n,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
234c4762a1bSJed Brown   ierr = MatSetType(A,MATDENSE);CHKERRQ(ierr);
235c4762a1bSJed Brown   ierr = MatSetFromOptions(A);CHKERRQ(ierr);
236c4762a1bSJed Brown   ierr = MatSetUp(A);CHKERRQ(ierr);
237c4762a1bSJed Brown 
238c4762a1bSJed Brown   ierr = MatCreateVecs(A,&U,NULL);CHKERRQ(ierr);
239c4762a1bSJed Brown 
240c4762a1bSJed Brown   ierr = MatCreate(PETSC_COMM_WORLD,&Ap);CHKERRQ(ierr);
241c4762a1bSJed Brown   ierr = MatSetSizes(Ap,n,1,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr);
242c4762a1bSJed Brown   ierr = MatSetType(Ap,MATDENSE);CHKERRQ(ierr);
243c4762a1bSJed Brown   ierr = MatSetFromOptions(Ap);CHKERRQ(ierr);
244c4762a1bSJed Brown   ierr = MatSetUp(Ap);CHKERRQ(ierr);
245c4762a1bSJed Brown   ierr = MatZeroEntries(Ap);CHKERRQ(ierr); /* initialize to zeros */
246c4762a1bSJed Brown 
247c4762a1bSJed Brown   ierr = VecGetArray(U,&u);CHKERRQ(ierr);
248c4762a1bSJed Brown   u[0] = 0;
249c4762a1bSJed Brown   u[1] = 1;
250c4762a1bSJed Brown   ierr = VecRestoreArray(U,&u);CHKERRQ(ierr);
251c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
252c4762a1bSJed Brown      Create timestepping solver context
253c4762a1bSJed Brown      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
254c4762a1bSJed Brown   ierr = TSCreate(PETSC_COMM_WORLD,&ts);CHKERRQ(ierr);
255c4762a1bSJed Brown   ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr);
256c4762a1bSJed Brown   ierr = TSSetType(ts,TSCN);CHKERRQ(ierr);
257c4762a1bSJed Brown   ierr = TSSetIFunction(ts,NULL,(TSIFunction)IFunction,&app);CHKERRQ(ierr);
258c4762a1bSJed Brown   ierr = TSSetIJacobian(ts,A,A,(TSIJacobian)IJacobian,&app);CHKERRQ(ierr);
259c4762a1bSJed Brown   ierr = TSSetRHSJacobianP(ts,Ap,RHSJacobianP,&app);CHKERRQ(ierr);
260c4762a1bSJed Brown 
261c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
262c4762a1bSJed Brown      Set initial conditions
263c4762a1bSJed Brown    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
264c4762a1bSJed Brown   ierr = TSSetSolution(ts,U);CHKERRQ(ierr);
265c4762a1bSJed Brown 
266c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
267c4762a1bSJed Brown     Save trajectory of solution so that TSAdjointSolve() may be used
268c4762a1bSJed Brown    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
269c4762a1bSJed Brown   ierr = TSSetSaveTrajectory(ts);CHKERRQ(ierr);
270c4762a1bSJed Brown 
271c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
272c4762a1bSJed Brown      Set solver options
273c4762a1bSJed Brown    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
274c4762a1bSJed Brown   ierr = TSSetMaxTime(ts,tend);CHKERRQ(ierr);
275c4762a1bSJed Brown   ierr = TSSetExactFinalTime(ts,TS_EXACTFINALTIME_MATCHSTEP);CHKERRQ(ierr);
276c4762a1bSJed Brown   ierr = TSSetTimeStep(ts,1./256.);CHKERRQ(ierr);
277c4762a1bSJed Brown   ierr = TSSetFromOptions(ts);CHKERRQ(ierr);
278c4762a1bSJed Brown 
279c4762a1bSJed Brown   /* Set directions and terminate flags for the two events */
280c4762a1bSJed Brown   direction[0] = 0;
281c4762a1bSJed Brown   terminate[0] = PETSC_FALSE;
282c4762a1bSJed Brown   ierr = TSSetEventHandler(ts,1,direction,terminate,EventFunction,PostEventFunction,(void*)&app);CHKERRQ(ierr);
283c4762a1bSJed Brown 
284c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
285c4762a1bSJed Brown      Run timestepping solver
286c4762a1bSJed Brown      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
287c4762a1bSJed Brown   ierr = TSSolve(ts,U);CHKERRQ(ierr);
288c4762a1bSJed Brown 
289c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
290c4762a1bSJed Brown      Adjoint model starts here
291c4762a1bSJed Brown      - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
292c4762a1bSJed Brown   ierr = MatCreateVecs(A,&lambda[0],NULL);CHKERRQ(ierr);
293c4762a1bSJed Brown   ierr = MatCreateVecs(A,&lambda[1],NULL);CHKERRQ(ierr);
294c4762a1bSJed Brown   /*   Set initial conditions for the adjoint integration */
295c4762a1bSJed Brown   ierr = VecZeroEntries(lambda[0]);CHKERRQ(ierr);
296c4762a1bSJed Brown   ierr = VecZeroEntries(lambda[1]);CHKERRQ(ierr);
297c4762a1bSJed Brown   ierr = VecGetArray(lambda[0],&u);CHKERRQ(ierr);
298c4762a1bSJed Brown   u[0] = 1.;
299c4762a1bSJed Brown   ierr = VecRestoreArray(lambda[0],&u);CHKERRQ(ierr);
300c4762a1bSJed Brown   ierr = VecGetArray(lambda[1],&u);CHKERRQ(ierr);
301c4762a1bSJed Brown   u[1] = 1.;
302c4762a1bSJed Brown   ierr = VecRestoreArray(lambda[1],&u);CHKERRQ(ierr);
303c4762a1bSJed Brown 
304c4762a1bSJed Brown   ierr = MatCreateVecs(Ap,&mu[0],NULL);CHKERRQ(ierr);
305c4762a1bSJed Brown   ierr = MatCreateVecs(Ap,&mu[1],NULL);CHKERRQ(ierr);
306c4762a1bSJed Brown   ierr = VecZeroEntries(mu[0]);CHKERRQ(ierr);
307c4762a1bSJed Brown   ierr = VecZeroEntries(mu[1]);CHKERRQ(ierr);
308c4762a1bSJed Brown   ierr = TSSetCostGradients(ts,2,lambda,mu);CHKERRQ(ierr);
309c4762a1bSJed Brown 
310c4762a1bSJed Brown   ierr = TSAdjointSolve(ts);CHKERRQ(ierr);
311c4762a1bSJed Brown 
312c4762a1bSJed Brown   /*
313c4762a1bSJed Brown   ierr = VecView(lambda[0],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
314c4762a1bSJed Brown   ierr = VecView(lambda[1],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
315c4762a1bSJed Brown   ierr = VecView(mu[0],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
316c4762a1bSJed Brown   ierr = VecView(mu[1],PETSC_VIEWER_STDOUT_WORLD);CHKERRQ(ierr);
317c4762a1bSJed Brown   */
318c4762a1bSJed Brown   ierr = VecGetArray(mu[0],&u);CHKERRQ(ierr);
319c4762a1bSJed Brown   ierr = VecGetArray(mu[1],&v);CHKERRQ(ierr);
320c4762a1bSJed Brown   f = fopen("adj_mu.out", "a");
321c4762a1bSJed Brown   ierr = PetscFPrintf(PETSC_COMM_WORLD,f,"%20.15lf %20.15lf %20.15lf\n",tend,u[0],v[0]);CHKERRQ(ierr);
322c4762a1bSJed Brown   ierr = VecRestoreArray(mu[0],&u);CHKERRQ(ierr);
323c4762a1bSJed Brown   ierr = VecRestoreArray(mu[1],&v);CHKERRQ(ierr);
324c4762a1bSJed Brown   fclose(f);
325c4762a1bSJed Brown   /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
326c4762a1bSJed Brown      Free work space.  All PETSc objects should be destroyed when they are no longer needed.
327c4762a1bSJed Brown    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - */
328c4762a1bSJed Brown   ierr = MatDestroy(&A);CHKERRQ(ierr);
329c4762a1bSJed Brown   ierr = VecDestroy(&U);CHKERRQ(ierr);
330c4762a1bSJed Brown   ierr = TSDestroy(&ts);CHKERRQ(ierr);
331c4762a1bSJed Brown 
332c4762a1bSJed Brown   ierr = MatDestroy(&Ap);CHKERRQ(ierr);
333c4762a1bSJed Brown   ierr = VecDestroy(&lambda[0]);CHKERRQ(ierr);
334c4762a1bSJed Brown   ierr = VecDestroy(&lambda[1]);CHKERRQ(ierr);
335c4762a1bSJed Brown   ierr = VecDestroy(&mu[0]);CHKERRQ(ierr);
336c4762a1bSJed Brown   ierr = VecDestroy(&mu[1]);CHKERRQ(ierr);
337c4762a1bSJed Brown   ierr = PetscFinalize();
338c4762a1bSJed Brown   return ierr;
339c4762a1bSJed Brown }
340c4762a1bSJed Brown 
341c4762a1bSJed Brown /*TEST
342c4762a1bSJed Brown 
343c4762a1bSJed Brown    build:
344c4762a1bSJed Brown       requires: !complex
345c4762a1bSJed Brown 
346c4762a1bSJed Brown    test:
347c4762a1bSJed Brown       args: -ts_monitor -ts_adjoint_monitor
348c4762a1bSJed Brown 
349c4762a1bSJed Brown TEST*/
350