1e0eea495SMark /* 2e0eea495SMark Implements the Kokkos kernel 3e0eea495SMark */ 4e0eea495SMark #include <petscconf.h> 5bd4f7539SJunchao Zhang #if defined(PETSC_HAVE_CUDA_CLANG) 68d80707aSStefano Zampini #include <petsclandau.h> 7bd4f7539SJunchao Zhang #define LANDAU_NOT_IMPLEMENTED SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Not supported with CLANG") 8e2f4a6cdSJunchao Zhang PetscErrorCode LandauKokkosJacobian(DM[], const PetscInt, const PetscInt, const PetscInt, const PetscInt, const PetscInt[], PetscReal[], PetscScalar[], const PetscScalar[], const LandauStaticData *, const PetscReal, const PetscLogEvent[], const PetscInt[], const PetscInt[], Mat[], Mat) 98d80707aSStefano Zampini { 108d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 118d80707aSStefano Zampini } 12e2f4a6cdSJunchao Zhang PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps *, pointInterpolationP4est (*)[LANDAU_MAX_Q_FACE], PetscInt[], PetscInt) 138d80707aSStefano Zampini { 148d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 158d80707aSStefano Zampini } 16ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps *, PetscInt) 178d80707aSStefano Zampini { 188d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 198d80707aSStefano Zampini } 20e2f4a6cdSJunchao Zhang PetscErrorCode LandauKokkosStaticDataSet(DM, const PetscInt, const PetscInt, const PetscInt, const PetscInt, PetscInt[], PetscInt[], PetscInt[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], LandauStaticData *) 218d80707aSStefano Zampini { 228d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 238d80707aSStefano Zampini } 24ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosStaticDataClear(LandauStaticData *) 258d80707aSStefano Zampini { 268d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 278d80707aSStefano Zampini } 288d80707aSStefano Zampini #else 2911d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 308d80707aSStefano Zampini #include <petsclandau.h> 31e0eea495SMark #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 32a16fd2c9SJacob Faibussowitsch #include <petsc/private/deviceimpl.h> 33e0eea495SMark #include <petscts.h> 34a587d139SMark 35e0eea495SMark #include <Kokkos_Core.hpp> 36e0eea495SMark #include <cstdio> 37e0eea495SMark typedef Kokkos::TeamPolicy<>::member_type team_member; 38e0eea495SMark #include "../land_tensors.h" 39e0eea495SMark 40d71ae5a4SJacob Faibussowitsch namespace landau_inner_red 41d71ae5a4SJacob Faibussowitsch { // namespace helps with name resolution in reduction identity 4252cdd6eaSMark template <class ScalarType> 43e0eea495SMark struct array_type { 4452cdd6eaSMark ScalarType gg2[LANDAU_DIM]; 4552cdd6eaSMark ScalarType gg3[LANDAU_DIM][LANDAU_DIM]; 46e0eea495SMark 47e0eea495SMark KOKKOS_INLINE_FUNCTION // Default constructor - Initialize to 0's 48d71ae5a4SJacob Faibussowitsch array_type() 49d71ae5a4SJacob Faibussowitsch { 50e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 5152cdd6eaSMark gg2[j] = 0; 52ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = 0; 53e0eea495SMark } 54e0eea495SMark } 55e0eea495SMark KOKKOS_INLINE_FUNCTION // Copy Constructor 56d71ae5a4SJacob Faibussowitsch array_type(const array_type &rhs) 57d71ae5a4SJacob Faibussowitsch { 58e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 5952cdd6eaSMark gg2[j] = rhs.gg2[j]; 60ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = rhs.gg3[j][k]; 61e0eea495SMark } 62e0eea495SMark } 63e0eea495SMark KOKKOS_INLINE_FUNCTION // add operator 64b859f8c0SPierre Jolivet array_type &operator+=(const array_type &src) 65d71ae5a4SJacob Faibussowitsch { 66e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 6752cdd6eaSMark gg2[j] += src.gg2[j]; 68ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 69e0eea495SMark } 70e0eea495SMark return *this; 71e0eea495SMark } 72e0eea495SMark KOKKOS_INLINE_FUNCTION // volatile add operator 73b859f8c0SPierre Jolivet void operator+=(const volatile array_type &src) volatile 74d71ae5a4SJacob Faibussowitsch { 75e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 7652cdd6eaSMark gg2[j] += src.gg2[j]; 77ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 78e0eea495SMark } 79e0eea495SMark } 80e0eea495SMark }; 8152cdd6eaSMark typedef array_type<PetscReal> TensorValueType; // used to simplify code below 829371c9d4SSatish Balay } // namespace landau_inner_red 83e0eea495SMark 84d71ae5a4SJacob Faibussowitsch namespace Kokkos 85d71ae5a4SJacob Faibussowitsch { //reduction identity must be defined in Kokkos namespace 86e0eea495SMark template <> 8752cdd6eaSMark struct reduction_identity<landau_inner_red::TensorValueType> { 889371c9d4SSatish Balay KOKKOS_FORCEINLINE_FUNCTION static landau_inner_red::TensorValueType sum() { return landau_inner_red::TensorValueType(); } 89e0eea495SMark }; 909371c9d4SSatish Balay } // namespace Kokkos 91e0eea495SMark 92e0eea495SMark extern "C" { 93f44ea33cSmarkadams4 PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps maps[], pointInterpolationP4est (*pointMaps)[LANDAU_MAX_Q_FACE], PetscInt Nf[], PetscInt grid) 94d71ae5a4SJacob Faibussowitsch { 95a587d139SMark P4estVertexMaps h_maps; /* host container */ 968a6f2e61SMark Adams const Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_points((pointInterpolationP4est *)pointMaps, maps[grid].num_reduced); 97f44ea33cSmarkadams4 const Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQND], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_gidx((LandauIdx *)maps[grid].gIdx, maps[grid].num_elements); 988a6f2e61SMark Adams Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *d_points = new Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight>("points", maps[grid].num_reduced); 99f44ea33cSmarkadams4 Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQND], Kokkos::LayoutRight> *d_gidx = new Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQND], Kokkos::LayoutRight>("gIdx", maps[grid].num_elements); 100a587d139SMark 101a587d139SMark PetscFunctionBegin; 102a587d139SMark Kokkos::deep_copy(*d_gidx, h_gidx); 103a587d139SMark Kokkos::deep_copy(*d_points, h_points); 1048a6f2e61SMark Adams h_maps.num_elements = maps[grid].num_elements; 1058a6f2e61SMark Adams h_maps.num_face = maps[grid].num_face; 1068a6f2e61SMark Adams h_maps.num_reduced = maps[grid].num_reduced; 1078a6f2e61SMark Adams h_maps.deviceType = maps[grid].deviceType; 1088a6f2e61SMark Adams h_maps.numgrids = maps[grid].numgrids; 1098a6f2e61SMark Adams h_maps.Nf = Nf[grid]; 110a587d139SMark h_maps.c_maps = (pointInterpolationP4est(*)[LANDAU_MAX_Q_FACE])d_points->data(); 1118a6f2e61SMark Adams maps[grid].vp1 = (void *)d_points; 112f44ea33cSmarkadams4 h_maps.gIdx = (LandauIdx(*)[LANDAU_MAX_SPECIES][LANDAU_MAX_NQND])d_gidx->data(); 1138a6f2e61SMark Adams maps[grid].vp2 = (void *)d_gidx; 114a587d139SMark { 115a587d139SMark Kokkos::View<P4estVertexMaps, Kokkos::HostSpace> h_maps_k(&h_maps); 11611d22bbfSJunchao Zhang Kokkos::View<P4estVertexMaps> *d_maps_k = new Kokkos::View<P4estVertexMaps>(Kokkos::create_mirror(Kokkos::DefaultExecutionSpace::memory_space(), h_maps_k)); 117a587d139SMark Kokkos::deep_copy(*d_maps_k, h_maps_k); 1188a6f2e61SMark Adams maps[grid].d_self = d_maps_k->data(); 1198a6f2e61SMark Adams maps[grid].vp3 = (void *)d_maps_k; 120a587d139SMark } 1213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 122a587d139SMark } 123d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps maps[], PetscInt num_grids) 124d71ae5a4SJacob Faibussowitsch { 125362febeeSStefano Zampini PetscFunctionBegin; 1268a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 1278a6f2e61SMark Adams auto a = static_cast<Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *>(maps[grid].vp1); 128f44ea33cSmarkadams4 auto b = static_cast<Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQND], Kokkos::LayoutRight> *>(maps[grid].vp2); 1298a6f2e61SMark Adams auto c = static_cast<Kokkos::View<P4estVertexMaps *> *>(maps[grid].vp3); 1309371c9d4SSatish Balay delete a; 1319371c9d4SSatish Balay delete b; 1329371c9d4SSatish Balay delete c; 1338a6f2e61SMark Adams } 1343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 135a587d139SMark } 136a587d139SMark 137f44ea33cSmarkadams4 PetscErrorCode LandauKokkosStaticDataSet(DM plex, const PetscInt Nq, const PetscInt Nb, const PetscInt batch_sz, const PetscInt num_grids, PetscInt a_numCells[], PetscInt a_species_offset[], PetscInt a_mat_offset[], PetscReal a_nu_alpha[], PetscReal a_nu_beta[], PetscReal a_invMass[], PetscReal a_lambdas[], PetscReal a_invJ[], PetscReal a_x[], PetscReal a_y[], PetscReal a_z[], PetscReal a_w[], LandauStaticData *SData_d) 138d71ae5a4SJacob Faibussowitsch { 139e0eea495SMark PetscReal *BB, *DD; 140e8d2b73aSMark Adams PetscTabulation *Tf; 1418a6f2e61SMark Adams PetscInt dim; 142f44ea33cSmarkadams4 PetscInt ip_offset[LANDAU_MAX_GRIDS + 1], ipf_offset[LANDAU_MAX_GRIDS + 1], elem_offset[LANDAU_MAX_GRIDS + 1], nip, IPf_sz, Nftot; 143e8d2b73aSMark Adams PetscDS prob; 144e0eea495SMark 145e0eea495SMark PetscFunctionBegin; 1469566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex, &dim)); 1479566063dSJacob Faibussowitsch PetscCall(DMGetDS(plex, &prob)); 14863a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 1499566063dSJacob Faibussowitsch PetscCall(PetscDSGetTabulation(prob, &Tf)); 1509371c9d4SSatish Balay BB = Tf[0]->T[0]; 1519371c9d4SSatish Balay DD = Tf[0]->T[1]; 1528a6f2e61SMark Adams ip_offset[0] = ipf_offset[0] = elem_offset[0] = 0; 1538a6f2e61SMark Adams nip = 0; 1548a6f2e61SMark Adams IPf_sz = 0; 1558a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 1568a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 1578a6f2e61SMark Adams elem_offset[grid + 1] = elem_offset[grid] + a_numCells[grid]; 1588a6f2e61SMark Adams nip += a_numCells[grid] * Nq; 1598a6f2e61SMark Adams ip_offset[grid + 1] = nip; 1608a6f2e61SMark Adams IPf_sz += Nq * nfloc * a_numCells[grid]; 1618a6f2e61SMark Adams ipf_offset[grid + 1] = IPf_sz; 1628a6f2e61SMark Adams } 1638a6f2e61SMark Adams Nftot = a_species_offset[num_grids]; 1649566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 165e8d2b73aSMark Adams { 1668a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_alpha(a_nu_alpha, Nftot); 1678a6f2e61SMark Adams auto alpha = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("alpha", Nftot); 168e8d2b73aSMark Adams SData_d->alpha = static_cast<void *>(alpha); 1698a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_beta(a_nu_beta, Nftot); 1708a6f2e61SMark Adams auto beta = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("beta", Nftot); 171e8d2b73aSMark Adams SData_d->beta = static_cast<void *>(beta); 1728a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invMass(a_invMass, Nftot); 1738a6f2e61SMark Adams auto invMass = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invMass", Nftot); 174e8d2b73aSMark Adams SData_d->invMass = static_cast<void *>(invMass); 175ae6bf4a8Smarkadams4 const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_lambdas(a_lambdas, LANDAU_MAX_GRIDS * LANDAU_MAX_GRIDS); 176ae6bf4a8Smarkadams4 auto lambdas = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("lambdas", LANDAU_MAX_GRIDS * LANDAU_MAX_GRIDS); 177ae6bf4a8Smarkadams4 SData_d->lambdas = static_cast<void *>(lambdas); 178e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_BB(BB, Nq * Nb); 179e8d2b73aSMark Adams auto B = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("B", Nq * Nb); 180e8d2b73aSMark Adams SData_d->B = static_cast<void *>(B); 181e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_DD(DD, Nq * Nb * dim); 182e8d2b73aSMark Adams auto D = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("D", Nq * Nb * dim); 183e8d2b73aSMark Adams SData_d->D = static_cast<void *>(D); 184e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invJ(a_invJ, nip * dim * dim); 185e8d2b73aSMark Adams auto invJ = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invJ", nip * dim * dim); 186e8d2b73aSMark Adams SData_d->invJ = static_cast<void *>(invJ); 187e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_x(a_x, nip); 188e8d2b73aSMark Adams auto x = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("x", nip); 189e8d2b73aSMark Adams SData_d->x = static_cast<void *>(x); 190e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_y(a_y, nip); 191e8d2b73aSMark Adams auto y = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("y", nip); 192e8d2b73aSMark Adams SData_d->y = static_cast<void *>(y); 193e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_w(a_w, nip); 194e8d2b73aSMark Adams auto w = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("w", nip); 195e8d2b73aSMark Adams SData_d->w = static_cast<void *>(w); 196e8d2b73aSMark Adams 197e8d2b73aSMark Adams Kokkos::deep_copy(*alpha, h_alpha); 198e8d2b73aSMark Adams Kokkos::deep_copy(*beta, h_beta); 199e8d2b73aSMark Adams Kokkos::deep_copy(*invMass, h_invMass); 200ae6bf4a8Smarkadams4 Kokkos::deep_copy(*lambdas, h_lambdas); 201e8d2b73aSMark Adams Kokkos::deep_copy(*B, h_BB); 202e8d2b73aSMark Adams Kokkos::deep_copy(*D, h_DD); 203e8d2b73aSMark Adams Kokkos::deep_copy(*invJ, h_invJ); 204e8d2b73aSMark Adams Kokkos::deep_copy(*x, h_x); 205e8d2b73aSMark Adams Kokkos::deep_copy(*y, h_y); 206e8d2b73aSMark Adams Kokkos::deep_copy(*w, h_w); 207e8d2b73aSMark Adams 2088a6f2e61SMark Adams if (dim == 3) { 209984ed092SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_z(a_z, nip); 2108a6f2e61SMark Adams auto z = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("z", nip); 2118a6f2e61SMark Adams SData_d->z = static_cast<void *>(z); 2128a6f2e61SMark Adams Kokkos::deep_copy(*z, h_z); 2138a6f2e61SMark Adams } else SData_d->z = NULL; 2148a6f2e61SMark Adams 2158a6f2e61SMark Adams // 2168a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_NCells(a_numCells, num_grids); 2178a6f2e61SMark Adams auto nc = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("NCells", num_grids); 2188a6f2e61SMark Adams SData_d->NCells = static_cast<void *>(nc); 2198a6f2e61SMark Adams Kokkos::deep_copy(*nc, h_NCells); 2208a6f2e61SMark Adams 2218a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_species_offset(a_species_offset, num_grids + 1); 2228a6f2e61SMark Adams auto soff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("species_offset", num_grids + 1); 2238a6f2e61SMark Adams SData_d->species_offset = static_cast<void *>(soff); 2248a6f2e61SMark Adams Kokkos::deep_copy(*soff, h_species_offset); 2258a6f2e61SMark Adams 2268a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_mat_offset(a_mat_offset, num_grids + 1); 2278a6f2e61SMark Adams auto moff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("mat_offset", num_grids + 1); 2288a6f2e61SMark Adams SData_d->mat_offset = static_cast<void *>(moff); 2298a6f2e61SMark Adams Kokkos::deep_copy(*moff, h_mat_offset); 2308a6f2e61SMark Adams 2318a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ip_offset(ip_offset, num_grids + 1); 2328a6f2e61SMark Adams auto ipoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ip_offset", num_grids + 1); 2338a6f2e61SMark Adams SData_d->ip_offset = static_cast<void *>(ipoff); 2348a6f2e61SMark Adams Kokkos::deep_copy(*ipoff, h_ip_offset); 2358a6f2e61SMark Adams 2368a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_elem_offset(elem_offset, num_grids + 1); 2378a6f2e61SMark Adams auto eoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("elem_offset", num_grids + 1); 2388a6f2e61SMark Adams SData_d->elem_offset = static_cast<void *>(eoff); 2398a6f2e61SMark Adams Kokkos::deep_copy(*eoff, h_elem_offset); 2408a6f2e61SMark Adams 2418a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ipf_offset(ipf_offset, num_grids + 1); 2428a6f2e61SMark Adams auto ipfoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ipf_offset", num_grids + 1); 2438a6f2e61SMark Adams SData_d->ipf_offset = static_cast<void *>(ipfoff); 2448a6f2e61SMark Adams Kokkos::deep_copy(*ipfoff, h_ipf_offset); 2458a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 2468fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutLeft>("fdf", batch_sz, dim + 1, IPf_sz); 2478a6f2e61SMark Adams #else 2488fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutRight>("fdf", batch_sz, dim + 1, IPf_sz); 2498a6f2e61SMark Adams #endif 2508a6f2e61SMark Adams SData_d->ipfdf_data = static_cast<void *>(ipfdf_data); 2518fdabdddSMark Adams auto Eq_m = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("Eq_m", Nftot); // allocate but do not set, same for whole batch 252e8d2b73aSMark Adams SData_d->Eq_m = static_cast<void *>(Eq_m); 253cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_offsets((LandauIdx *)SData_d->coo_elem_offsets, SData_d->coo_n_cellsTot + 1); 254cada7fc7SMark Adams auto coo_elem_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot + 1); 255cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_fullNb((LandauIdx *)SData_d->coo_elem_fullNb, SData_d->coo_n_cellsTot); 256cada7fc7SMark Adams auto coo_elem_fullNb = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot); 257f44ea33cSmarkadams4 const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_point_offsets((LandauIdx *)SData_d->coo_elem_point_offsets, SData_d->coo_n_cellsTot * (LANDAU_MAX_NQND + 1)); 258f44ea33cSmarkadams4 auto coo_elem_point_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_point_offsets", SData_d->coo_n_cellsTot * (LANDAU_MAX_NQND + 1)); 259bfc784b7SMark Adams // assign & copy 260bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_offsets, h_coo_elem_offsets); 261bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_fullNb, h_coo_elem_fullNb); 262bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_point_offsets, h_coo_elem_point_offsets); 263bfc784b7SMark Adams // need to free this now and use pointer space 2649566063dSJacob Faibussowitsch PetscCall(PetscFree3(SData_d->coo_elem_offsets, SData_d->coo_elem_fullNb, SData_d->coo_elem_point_offsets)); 265cada7fc7SMark Adams SData_d->coo_elem_offsets = static_cast<void *>(coo_elem_offsets); 266cada7fc7SMark Adams SData_d->coo_elem_fullNb = static_cast<void *>(coo_elem_fullNb); 267cada7fc7SMark Adams SData_d->coo_elem_point_offsets = static_cast<void *>(coo_elem_point_offsets); 268a31f6053SMark Adams auto coo_vals = new Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace>("coo_vals", SData_d->coo_size); 269a31f6053SMark Adams SData_d->coo_vals = static_cast<void *>(coo_vals); 270e8d2b73aSMark Adams } 2718a6f2e61SMark Adams SData_d->maps = NULL; // not used 2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 273e8d2b73aSMark Adams } 274e8d2b73aSMark Adams 275d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosStaticDataClear(LandauStaticData *SData_d) 276d71ae5a4SJacob Faibussowitsch { 277e8d2b73aSMark Adams PetscFunctionBegin; 278e8d2b73aSMark Adams if (SData_d->alpha) { 279e8d2b73aSMark Adams auto alpha = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); 280e8d2b73aSMark Adams delete alpha; 2818a6f2e61SMark Adams SData_d->alpha = NULL; 282e8d2b73aSMark Adams auto beta = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 283e8d2b73aSMark Adams delete beta; 284e8d2b73aSMark Adams auto invMass = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 285e8d2b73aSMark Adams delete invMass; 286ae6bf4a8Smarkadams4 auto lambdas = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->lambdas); 287ae6bf4a8Smarkadams4 delete lambdas; 288e8d2b73aSMark Adams auto B = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 289e8d2b73aSMark Adams delete B; 290e8d2b73aSMark Adams auto D = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 291e8d2b73aSMark Adams delete D; 292e8d2b73aSMark Adams auto invJ = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); 293e8d2b73aSMark Adams delete invJ; 294e8d2b73aSMark Adams auto x = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); 295e8d2b73aSMark Adams delete x; 296e8d2b73aSMark Adams auto y = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); 297e8d2b73aSMark Adams delete y; 2988a6f2e61SMark Adams if (SData_d->z) { 299e8d2b73aSMark Adams auto z = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); 300e8d2b73aSMark Adams delete z; 3018a6f2e61SMark Adams } 3028a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 3038fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 3048a6f2e61SMark Adams #else 3058fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 3068a6f2e61SMark Adams #endif 3078a6f2e61SMark Adams delete z; 308e8d2b73aSMark Adams auto w = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); 309e8d2b73aSMark Adams delete w; 310e8d2b73aSMark Adams auto Eq_m = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); 311e8d2b73aSMark Adams delete Eq_m; 3128a6f2e61SMark Adams // offset 3138a6f2e61SMark Adams auto nc = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 3148a6f2e61SMark Adams delete nc; 3158a6f2e61SMark Adams auto soff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 3168a6f2e61SMark Adams delete soff; 3178a6f2e61SMark Adams auto moff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 3188a6f2e61SMark Adams delete moff; 3198a6f2e61SMark Adams auto ipoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 3208a6f2e61SMark Adams delete ipoff; 3218a6f2e61SMark Adams auto eoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 3228a6f2e61SMark Adams delete eoff; 3238a6f2e61SMark Adams auto ipfoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 3248a6f2e61SMark Adams delete ipfoff; 325bfc784b7SMark Adams auto coo_elem_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_offsets); 326bfc784b7SMark Adams delete coo_elem_offsets; 327bfc784b7SMark Adams auto coo_elem_fullNb = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_fullNb); 328bfc784b7SMark Adams delete coo_elem_fullNb; 329cada7fc7SMark Adams auto coo_elem_point_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_point_offsets); 330bfc784b7SMark Adams delete coo_elem_point_offsets; 331bfc784b7SMark Adams SData_d->coo_elem_offsets = NULL; 332bfc784b7SMark Adams SData_d->coo_elem_point_offsets = NULL; 333bfc784b7SMark Adams SData_d->coo_elem_fullNb = NULL; 334a31f6053SMark Adams auto coo_vals = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace> *>((void *)SData_d->coo_vals); 335a31f6053SMark Adams delete coo_vals; 336af0767daSMark Adams } 3373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 338e8d2b73aSMark Adams } 339e8d2b73aSMark Adams 34059118022SMark Adams #define KOKKOS_SHARED_LEVEL 0 // 0 is shared, 1 is global 34159118022SMark Adams 3428a6f2e61SMark Adams KOKKOS_INLINE_FUNCTION 343f44ea33cSmarkadams4 PetscErrorCode landau_mat_assemble(PetscScalar *coo_vals, const PetscScalar Aij, const PetscInt f, const PetscInt g, const PetscInt Nb, PetscInt moffset, const PetscInt elem, const PetscInt fieldA, const P4estVertexMaps *d_maps, const LandauIdx coo_elem_offsets[], const LandauIdx coo_elem_fullNb[], const LandauIdx (*coo_elem_point_offsets)[LANDAU_MAX_NQND + 1], const PetscInt glb_elem_idx, const PetscInt bid_coo_sz_batch) 344d71ae5a4SJacob Faibussowitsch { 3454c55d725SMark Adams PetscInt idx, q, nr, nc; 3468a6f2e61SMark Adams const LandauIdx *const Idxs = &d_maps->gIdx[elem][fieldA][0]; 347bfc784b7SMark Adams PetscScalar row_scale[LANDAU_MAX_Q_FACE] = {0}, col_scale[LANDAU_MAX_Q_FACE] = {0}; 3484c55d725SMark Adams { // mirror (i,j) in CreateStaticGPUData 349bfc784b7SMark Adams const int fullNb = coo_elem_fullNb[glb_elem_idx], fullNb2 = fullNb * fullNb; 350bfc784b7SMark Adams idx = Idxs[f]; 351bfc784b7SMark Adams if (idx >= 0) { 352bfc784b7SMark Adams nr = 1; 353bfc784b7SMark Adams row_scale[0] = 1.; 354bfc784b7SMark Adams } else { 355bfc784b7SMark Adams idx = -idx - 1; 356bfc784b7SMark Adams for (q = 0, nr = 0; q < d_maps->num_face; q++, nr++) { 357bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 358bfc784b7SMark Adams row_scale[q] = d_maps->c_maps[idx][q].scale; 359bfc784b7SMark Adams } 360bfc784b7SMark Adams } 361bfc784b7SMark Adams idx = Idxs[g]; 362bfc784b7SMark Adams if (idx >= 0) { 363bfc784b7SMark Adams nc = 1; 364bfc784b7SMark Adams col_scale[0] = 1.; 365bfc784b7SMark Adams } else { 366bfc784b7SMark Adams idx = -idx - 1; 367bfc784b7SMark Adams nc = d_maps->num_face; 368bfc784b7SMark Adams for (q = 0, nc = 0; q < d_maps->num_face; q++, nc++) { 369bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 370bfc784b7SMark Adams col_scale[q] = d_maps->c_maps[idx][q].scale; 371bfc784b7SMark Adams } 372bfc784b7SMark Adams } 373cada7fc7SMark Adams const int idx0 = bid_coo_sz_batch + coo_elem_offsets[glb_elem_idx] + fieldA * fullNb2 + fullNb * coo_elem_point_offsets[glb_elem_idx][f] + nr * coo_elem_point_offsets[glb_elem_idx][g]; 374bfc784b7SMark Adams for (int q = 0, idx2 = idx0; q < nr; q++) { 375ad540459SPierre Jolivet for (int d = 0; d < nc; d++, idx2++) coo_vals[idx2] = row_scale[q] * col_scale[d] * Aij; 376bfc784b7SMark Adams } 377bfc784b7SMark Adams } 3783ba16761SJacob Faibussowitsch return PETSC_SUCCESS; 3798a6f2e61SMark Adams } 3808a6f2e61SMark Adams 381f44ea33cSmarkadams4 PetscErrorCode LandauKokkosJacobian(DM plex[], const PetscInt Nq, const PetscInt Nb, const PetscInt batch_sz, const PetscInt num_grids, const PetscInt a_numCells[], PetscReal a_Eq_m[], PetscScalar a_elem_closure[], const PetscScalar a_xarray[], const LandauStaticData *SData_d, const PetscReal shift, const PetscLogEvent events[], const PetscInt a_mat_offset[], const PetscInt a_species_offset[], Mat subJ[], Mat JacP) 382d71ae5a4SJacob Faibussowitsch { 383e8d2b73aSMark Adams using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 38419be780dSMark Adams using real2_scr_t = Kokkos::View<PetscScalar **, Kokkos::LayoutRight, scr_mem_t>; 385e8d2b73aSMark Adams using g2_scr_t = Kokkos::View<PetscReal ***, Kokkos::LayoutRight, scr_mem_t>; 386e8d2b73aSMark Adams using g3_scr_t = Kokkos::View<PetscReal ****, Kokkos::LayoutRight, scr_mem_t>; 387f44ea33cSmarkadams4 PetscInt dim, num_cells_max, Nf_max, num_cells_batch; 388b3d9744dSMark Adams int nfaces = 0, vector_size = 256 / Nq; 389e8d2b73aSMark Adams LandauCtx *ctx; 390e8d2b73aSMark Adams PetscReal *d_Eq_m = NULL; 3918a6f2e61SMark Adams PetscScalar *d_vertex_f = NULL; 3928a6f2e61SMark Adams P4estVertexMaps *maps[LANDAU_MAX_GRIDS]; // this gets captured 3938fdabdddSMark Adams PetscContainer container; 394bd08a171SMark Adams const int conc = Kokkos::DefaultExecutionSpace().concurrency(), openmp = !!(conc < 1000), team_size = (openmp == 0) ? Nq : 1; 395bfc784b7SMark Adams const PetscInt coo_sz_batch = SData_d->coo_size / batch_sz; // capture 396e8d2b73aSMark Adams auto d_alpha_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); //static data 397e8d2b73aSMark Adams const PetscReal *d_alpha = d_alpha_k->data(); 3988a6f2e61SMark Adams const PetscInt Nftot = d_alpha_k->size(); // total number of species 399e8d2b73aSMark Adams auto d_beta_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 400e8d2b73aSMark Adams const PetscReal *d_beta = d_beta_k->data(); 401e8d2b73aSMark Adams auto d_invMass_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 402e8d2b73aSMark Adams const PetscReal *d_invMass = d_invMass_k->data(); 403ae6bf4a8Smarkadams4 auto d_lambdas_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->lambdas); 404ae6bf4a8Smarkadams4 const PetscReal *d_lambdas = d_lambdas_k->data(); 405e8d2b73aSMark Adams auto d_B_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 406e8d2b73aSMark Adams const PetscReal *d_BB = d_B_k->data(); 407e8d2b73aSMark Adams auto d_D_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 408e8d2b73aSMark Adams const PetscReal *d_DD = d_D_k->data(); 409e8d2b73aSMark Adams auto d_invJ_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); // use Kokkos vector in kernels 410e8d2b73aSMark Adams auto d_x_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); //static data 411e8d2b73aSMark Adams const PetscReal *d_x = d_x_k->data(); 412e8d2b73aSMark Adams auto d_y_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); //static data 413e8d2b73aSMark Adams const PetscReal *d_y = d_y_k->data(); 414e8d2b73aSMark Adams auto d_z_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); //static data 4158a6f2e61SMark Adams const PetscReal *d_z = (LANDAU_DIM == 3) ? d_z_k->data() : NULL; 4168a6f2e61SMark Adams auto d_w_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); //static data 4178a6f2e61SMark Adams const PetscReal *d_w = d_w_k.data(); 4188fdabdddSMark Adams // grid offsets - single vertex grid data 4198a6f2e61SMark Adams auto d_numCells_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 4208a6f2e61SMark Adams const PetscInt *d_numCells = d_numCells_k->data(); 4218a6f2e61SMark Adams auto d_species_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 4228a6f2e61SMark Adams const PetscInt *d_species_offset = d_species_offset_k->data(); 4238a6f2e61SMark Adams auto d_mat_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 4248a6f2e61SMark Adams const PetscInt *d_mat_offset = d_mat_offset_k->data(); 4258a6f2e61SMark Adams auto d_ip_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 4268a6f2e61SMark Adams const PetscInt *d_ip_offset = d_ip_offset_k->data(); 4278a6f2e61SMark Adams auto d_ipf_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 4288a6f2e61SMark Adams const PetscInt *d_ipf_offset = d_ipf_offset_k->data(); 4298a6f2e61SMark Adams auto d_elem_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 4308a6f2e61SMark Adams const PetscInt *d_elem_offset = d_elem_offset_k->data(); 4318fdabdddSMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, including batched vertices 4328fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 4338a6f2e61SMark Adams #else 4348fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutRight> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 4358a6f2e61SMark Adams #endif 436f45b553cSPierre Jolivet auto d_Eq_m_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); // static storage, dynamic data - E(t), copy later, single vertex 437bfc784b7SMark Adams // COO 438cada7fc7SMark Adams auto d_coo_elem_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_offsets); 439cada7fc7SMark Adams LandauIdx *d_coo_elem_offsets = (SData_d->coo_size == 0) ? NULL : d_coo_elem_offsets_k->data(); 440cada7fc7SMark Adams auto d_coo_elem_fullNb_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_fullNb); 441cada7fc7SMark Adams LandauIdx *d_coo_elem_fullNb = (SData_d->coo_size == 0) ? NULL : d_coo_elem_fullNb_k->data(); 442cada7fc7SMark Adams auto d_coo_elem_point_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_point_offsets); 443f44ea33cSmarkadams4 LandauIdx(*d_coo_elem_point_offsets)[LANDAU_MAX_NQND + 1] = (SData_d->coo_size == 0) ? NULL : (LandauIdx(*)[LANDAU_MAX_NQND + 1]) d_coo_elem_point_offsets_k->data(); 444a31f6053SMark Adams auto d_coo_vals_k = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight> *>(SData_d->coo_vals); 445a31f6053SMark Adams PetscScalar *d_coo_vals = (SData_d->coo_size == 0) ? NULL : d_coo_vals_k->data(); 4468fdabdddSMark Adams 447e8d2b73aSMark Adams PetscFunctionBegin; 448a31f6053SMark Adams while (vector_size & (vector_size - 1)) vector_size = vector_size & (vector_size - 1); 449dbabbaf5SMark Adams if (vector_size > 16) vector_size = 16; // printf("DEBUG\n"); 4509566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[3], 0, 0, 0, 0)); 4519566063dSJacob Faibussowitsch PetscCall(DMGetApplicationContext(plex[0], &ctx)); 45228b400f6SJacob Faibussowitsch PetscCheck(ctx, PETSC_COMM_SELF, PETSC_ERR_PLIB, "no context"); 4539566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex[0], &dim)); 45463a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 455a587d139SMark if (ctx->gpu_assembly) { 4569566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)JacP, "assembly_maps", (PetscObject *)&container)); 457966bd95aSPierre Jolivet PetscCheck(container, PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 458a587d139SMark P4estVertexMaps *h_maps = NULL; 4592a8381b2SBarry Smith PetscCall(PetscContainerGetPointer(container, &h_maps)); 4608a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 461966bd95aSPierre Jolivet PetscCheck(h_maps[grid].d_self, PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 4628a6f2e61SMark Adams maps[grid] = h_maps[grid].d_self; 4638a6f2e61SMark Adams nfaces = h_maps[grid].num_face; // nface=0 for CPU assembly 4648a6f2e61SMark Adams } 4654c55d725SMark Adams PetscCheck(d_coo_vals, PETSC_COMM_SELF, PETSC_ERR_PLIB, "d_coo_vals==0"); 466a587d139SMark } else { 4678a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) maps[grid] = NULL; 4688a6f2e61SMark Adams nfaces = 0; 4698fdabdddSMark Adams container = NULL; 470a587d139SMark } 4718fdabdddSMark Adams num_cells_batch = Nf_max = num_cells_max = 0; 4728a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 4738a6f2e61SMark Adams int Nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 4748a6f2e61SMark Adams if (Nfloc > Nf_max) Nf_max = Nfloc; 4758a6f2e61SMark Adams if (a_numCells[grid] > num_cells_max) num_cells_max = a_numCells[grid]; 4768fdabdddSMark Adams num_cells_batch += a_numCells[grid]; // we don't have a host element offset here (but in ctx) 4778a6f2e61SMark Adams } 478d9008a5dSMark Adams const int elem_mat_num_cells_max_grid = container ? 0 : num_cells_max; 479bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 480f44ea33cSmarkadams4 const int totDim_max = Nf_max * Nb, elem_mat_size_max = totDim_max * totDim_max; 481a31f6053SMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight> d_elem_mats("element matrices", batch_sz, num_grids, elem_mat_num_cells_max_grid, elem_mat_size_max); // not used (cpu assembly) 482bfbbad94Smarkadams4 #endif 4838a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_Eq_m_k(a_Eq_m, Nftot); 4848a6f2e61SMark Adams if (a_elem_closure || a_xarray) { 485e8d2b73aSMark Adams Kokkos::deep_copy(*d_Eq_m_k, h_Eq_m_k); 486e8d2b73aSMark Adams d_Eq_m = d_Eq_m_k->data(); 4878a6f2e61SMark Adams } else d_Eq_m = NULL; 4889566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 4899566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[3], 0, 0, 0, 0)); 4908a6f2e61SMark Adams if (a_elem_closure || a_xarray) { // Jacobian, create f & df 4918a6f2e61SMark Adams Kokkos::View<PetscScalar *, Kokkos::LayoutLeft> *d_vertex_f_k = NULL; 4929566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[1], 0, 0, 0, 0)); 4938a6f2e61SMark Adams if (a_elem_closure) { 4948a6f2e61SMark Adams PetscInt closure_sz = 0; // argh, don't have this on the host!!! 4958a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 4968a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 497f44ea33cSmarkadams4 closure_sz += Nb * nfloc * a_numCells[grid]; 4988a6f2e61SMark Adams } 4998fdabdddSMark Adams closure_sz *= batch_sz; 5008a6f2e61SMark Adams d_vertex_f_k = new Kokkos::View<PetscScalar *, Kokkos::LayoutLeft>("closure", closure_sz); 5018a6f2e61SMark Adams const Kokkos::View<PetscScalar *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_closure_k(a_elem_closure, closure_sz); // Vertex data for each element 5028a6f2e61SMark Adams Kokkos::deep_copy(*d_vertex_f_k, h_closure_k); 5038a6f2e61SMark Adams d_vertex_f = d_vertex_f_k->data(); 504af0767daSMark Adams } else { 5058a6f2e61SMark Adams d_vertex_f = (PetscScalar *)a_xarray; 506af0767daSMark Adams } 5079566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[1], 0, 0, 0, 0)); 5089566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[8], 0, 0, 0, 0)); 5099566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 51019be780dSMark Adams 51119be780dSMark Adams const int scr_bytes_fdf = real2_scr_t::shmem_size(Nf_max, Nb); 5122d93f1a5SMark Adams PetscCall(PetscInfo(plex[0], "df & f shared memory size: %d bytes in level, %d num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", scr_bytes_fdf, KOKKOS_SHARED_LEVEL, (int)(num_cells_batch * batch_sz), team_size, vector_size, nfaces, (int)Nf_max)); 5139371c9d4SSatish Balay Kokkos::parallel_for( 514b3d9744dSMark Adams "f, df", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerTeam(scr_bytes_fdf)), KOKKOS_LAMBDA(const team_member team) { 5158fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem, IPf_sz_glb = d_ipf_offset[num_grids]; 5168a6f2e61SMark Adams // find my grid 5178fdabdddSMark Adams PetscInt grid = 0; 5188fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 5198a6f2e61SMark Adams { 5208fdabdddSMark Adams const PetscInt loc_nip = d_numCells[grid] * Nq, loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 5218fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 52219be780dSMark Adams { 52319be780dSMark Adams real2_scr_t s_coef_k(team.team_scratch(KOKKOS_SHARED_LEVEL), Nf_max, Nb); 52419be780dSMark Adams PetscScalar *coef; 5258fdabdddSMark Adams const PetscReal *invJe = &d_invJ_k((d_ip_offset[grid] + loc_elem * Nq) * dim * dim); 526a587d139SMark // un pack IPData 5278a6f2e61SMark Adams if (!maps[grid]) { 5288fdabdddSMark Adams coef = &d_vertex_f[b_id * IPf_sz_glb + d_ipf_offset[grid] + loc_elem * Nb * loc_Nf]; // closure and IP indexing are the same 529af0767daSMark Adams } else { 53019be780dSMark Adams coef = s_coef_k.data(); 53119be780dSMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, (int)loc_Nf), [=](int f) { 53219be780dSMark Adams //for (int f = 0; f < loc_Nf; ++f) { 53319be780dSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)Nb), [=](int b) { 53419be780dSMark Adams //for (int b = 0; b < Nb; ++b) { 53519be780dSMark Adams LandauIdx idx = maps[grid]->gIdx[loc_elem][f][b]; 536af0767daSMark Adams if (idx >= 0) { 53719be780dSMark Adams coef[f * Nb + b] = d_vertex_f[idx + moffset]; // xarray data, not IP, need raw array to deal with CPU assemble case (not used) 538af0767daSMark Adams } else { 539af0767daSMark Adams idx = -idx - 1; 54019be780dSMark Adams coef[f * Nb + b] = 0; 5418a6f2e61SMark Adams for (int q = 0; q < maps[grid]->num_face; q++) { 5428a6f2e61SMark Adams PetscInt id = maps[grid]->c_maps[idx][q].gid; 5438a6f2e61SMark Adams PetscScalar scale = maps[grid]->c_maps[idx][q].scale; 544f26f10aaSMark Adams if (id >= 0) coef[f * Nb + b] += scale * d_vertex_f[id + moffset]; 545af0767daSMark Adams } 546af0767daSMark Adams } 54719be780dSMark Adams }); 54819be780dSMark Adams }); 549af0767daSMark Adams } 55019be780dSMark Adams team.team_barrier(); 551a587d139SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 5528fdabdddSMark Adams const PetscReal *const invJ = &invJe[myQi * dim * dim]; // b_elem_idx: batch element index 553a587d139SMark const PetscReal *Bq = &d_BB[myQi * Nb], *Dq = &d_DD[myQi * Nb * dim]; 5548fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)loc_Nf), [=](int f) { 555a587d139SMark PetscInt b, e, d; 556e8d2b73aSMark Adams PetscReal refSpaceDer[LANDAU_DIM]; 5578fdabdddSMark Adams const PetscInt idx = d_ipf_offset[grid] + f * loc_nip + loc_elem * Nq + myQi; 5588fdabdddSMark Adams d_fdf_k(b_id, 0, idx) = 0.0; 559a587d139SMark for (d = 0; d < LANDAU_DIM; ++d) refSpaceDer[d] = 0.0; 560a587d139SMark for (b = 0; b < Nb; ++b) { 56119be780dSMark Adams d_fdf_k(b_id, 0, idx) += Bq[b] * PetscRealPart(coef[f * Nb + b]); 56219be780dSMark Adams for (d = 0; d < dim; ++d) refSpaceDer[d] += Dq[b * dim + d] * PetscRealPart(coef[f * Nb + b]); 563a587d139SMark } 564a587d139SMark for (d = 0; d < dim; ++d) { 565ad540459SPierre Jolivet for (e = 0, d_fdf_k(b_id, d + 1, idx) = 0.0; e < dim; ++e) d_fdf_k(b_id, d + 1, idx) += invJ[e * dim + d] * refSpaceDer[e]; 566a587d139SMark } 5678a6f2e61SMark Adams }); // f 5688a6f2e61SMark Adams }); // myQi 5698a6f2e61SMark Adams } 57019be780dSMark Adams team.team_barrier(); 57119be780dSMark Adams } // 'grid' scope 5728a6f2e61SMark Adams }); // global elems - fdf 5738a6f2e61SMark Adams Kokkos::fence(); 574bfbbad94Smarkadams4 PetscCall(PetscLogGpuTimeEnd()); 5759566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[8], 0, 0, 0, 0)); 576e6118d12SMark Adams // Jacobian 5776f2c871aSStefano Zampini size_t maximum_shared_mem_size = 64000; 578a16fd2c9SJacob Faibussowitsch PetscDevice device; 579a16fd2c9SJacob Faibussowitsch 580a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetDefault_Internal(&device)); 581a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetAttribute(device, PETSC_DEVICE_ATTR_SIZE_T_SHARED_MEM_PER_BLOCK, &maximum_shared_mem_size)); 5826f2c871aSStefano Zampini size_t jac_scr_bytes = (size_t)2 * (g2_scr_t::shmem_size(dim, Nf_max, Nq) + g3_scr_t::shmem_size(dim, dim, Nf_max, Nq)); 583d9008a5dSMark Adams const int jac_shared_level = (jac_scr_bytes > maximum_shared_mem_size) ? 1 : KOKKOS_SHARED_LEVEL; 584ae6bf4a8Smarkadams4 // device function/lambda 585d71ae5a4SJacob Faibussowitsch auto jac_lambda = KOKKOS_LAMBDA(const team_member team) 586d71ae5a4SJacob Faibussowitsch { 5878fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 5888a6f2e61SMark Adams // find my grid 5898fdabdddSMark Adams PetscInt grid = 0; 5908fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 5918a6f2e61SMark Adams { 59219be780dSMark Adams const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 5938fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 594bfbbad94Smarkadams4 const PetscInt f_off = d_species_offset[grid]; 595bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 596f44ea33cSmarkadams4 const PetscInt totDim = loc_Nf * Nb; 597bfbbad94Smarkadams4 #endif 598d9008a5dSMark Adams g2_scr_t g2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 599d9008a5dSMark Adams g3_scr_t g3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 600d9008a5dSMark Adams g2_scr_t gg2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 601d9008a5dSMark Adams g3_scr_t gg3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 602e0eea495SMark // get g2[] & g3[] 603e0eea495SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 604e0eea495SMark using Kokkos::parallel_reduce; 6058fdabdddSMark Adams const PetscInt jpidx_glb = d_ip_offset[grid] + loc_elem * Nq + myQi; 6068fdabdddSMark Adams const PetscReal *invJ = &d_invJ_k(jpidx_glb * dim * dim); 6078fdabdddSMark Adams const PetscReal vj[3] = {d_x[jpidx_glb], d_y[jpidx_glb], d_z ? d_z[jpidx_glb] : 0}, wj = d_w[jpidx_glb]; 6088a6f2e61SMark Adams landau_inner_red::TensorValueType gg_temp; // reduce on part of gg2 and g33 for IP jpidx_g 6099371c9d4SSatish Balay Kokkos::parallel_reduce( 6109371c9d4SSatish Balay Kokkos::ThreadVectorRange(team, (int)d_ip_offset[num_grids]), 6119371c9d4SSatish Balay [=](const int &ipidx, landau_inner_red::TensorValueType &ggg) { 612e8d2b73aSMark Adams const PetscReal wi = d_w[ipidx], x = d_x[ipidx], y = d_y[ipidx]; 61352cdd6eaSMark PetscReal temp1[3] = {0, 0, 0}, temp2 = 0; 6146b664d00Smarkadams4 PetscInt fieldB, d2, d3, f_off_r, grid_r, ipidx_g, nip_loc_r, loc_Nf_r; 615e0eea495SMark #if LANDAU_DIM == 2 6168a6f2e61SMark Adams PetscReal Ud[2][2], Uk[2][2], mask = (PetscAbs(vj[0] - x) < 100 * PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1] - y) < 100 * PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6178a6f2e61SMark Adams LandauTensor2D(vj, x, y, Ud, Uk, mask); 61852cdd6eaSMark #else 6197620afa1SMark Adams PetscReal U[3][3], z = d_z[ipidx], mask = (PetscAbs(vj[0]-x) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1]-y) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[2]-z) < 100*PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6208a6f2e61SMark Adams LandauTensor3D(vj, x, y, z, U, mask); 62152cdd6eaSMark #endif 6228a6f2e61SMark Adams grid_r = 0; 6238a6f2e61SMark Adams while (ipidx >= d_ip_offset[grid_r + 1]) grid_r++; // yuck search for grid 6248a6f2e61SMark Adams f_off_r = d_species_offset[grid_r]; 6258a6f2e61SMark Adams ipidx_g = ipidx - d_ip_offset[grid_r]; 6268a6f2e61SMark Adams nip_loc_r = d_numCells[grid_r] * Nq; 6278fdabdddSMark Adams loc_Nf_r = d_species_offset[grid_r + 1] - d_species_offset[grid_r]; 628ae6bf4a8Smarkadams4 for (fieldB = 0; fieldB < loc_Nf_r; ++fieldB) { // fieldB is \beta d_lambdas[grid][grid_r] 6296b664d00Smarkadams4 const PetscInt idx = d_ipf_offset[grid_r] + fieldB * nip_loc_r + ipidx_g; 63087ece978Smarkadams4 const PetscReal ff1 = d_beta[fieldB + f_off_r] * d_lambdas[LANDAU_MAX_GRIDS * grid + grid_r], ff2 = d_invMass[fieldB + f_off_r] * ff1; 63187ece978Smarkadams4 temp1[0] += d_fdf_k(b_id, 1, idx) * ff2; 63287ece978Smarkadams4 temp1[1] += d_fdf_k(b_id, 2, idx) * ff2; 63352cdd6eaSMark #if LANDAU_DIM == 3 63487ece978Smarkadams4 temp1[2] += d_fdf_k(b_id, 3, idx) * ff2; 63552cdd6eaSMark #endif 63687ece978Smarkadams4 temp2 += d_fdf_k(b_id, 0, idx) * ff1; 63752cdd6eaSMark } 63852cdd6eaSMark temp1[0] *= wi; 63952cdd6eaSMark temp1[1] *= wi; 64052cdd6eaSMark #if LANDAU_DIM == 3 64152cdd6eaSMark temp1[2] *= wi; 64252cdd6eaSMark #endif 64352cdd6eaSMark temp2 *= wi; 64452cdd6eaSMark #if LANDAU_DIM == 2 64552cdd6eaSMark for (d2 = 0; d2 < 2; d2++) { 646e0eea495SMark for (d3 = 0; d3 < 2; ++d3) { 647e0eea495SMark /* K = U * grad(f): g2=e: i,A */ 64852cdd6eaSMark ggg.gg2[d2] += Uk[d2][d3] * temp1[d3]; 649e0eea495SMark /* D = -U * (I \kron (fx)): g3=f: i,j,A */ 65052cdd6eaSMark ggg.gg3[d2][d3] += Ud[d2][d3] * temp2; 651e0eea495SMark } 652e0eea495SMark } 653e0eea495SMark #else 654e0eea495SMark for (d2 = 0; d2 < 3; ++d2) { 655e0eea495SMark for (d3 = 0; d3 < 3; ++d3) { 656e0eea495SMark /* K = U * grad(f): g2 = e: i,A */ 65752cdd6eaSMark ggg.gg2[d2] += U[d2][d3]*temp1[d3]; 658e0eea495SMark /* D = -U * (I \kron (fx)): g3 = f: i,j,A */ 65952cdd6eaSMark ggg.gg3[d2][d3] += U[d2][d3]*temp2; 660e0eea495SMark } 661e0eea495SMark } 662e0eea495SMark #endif 6639371c9d4SSatish Balay }, 6649371c9d4SSatish Balay Kokkos::Sum<landau_inner_red::TensorValueType>(gg_temp)); 66552cdd6eaSMark // add alpha and put in gg2/3 6666b664d00Smarkadams4 Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { // \alpha 66752cdd6eaSMark PetscInt d2, d3; 66852cdd6eaSMark for (d2 = 0; d2 < dim; d2++) { 6698a6f2e61SMark Adams gg2(d2, fieldA, myQi) = gg_temp.gg2[d2] * d_alpha[fieldA + f_off]; 670ad540459SPierre Jolivet for (d3 = 0; d3 < dim; d3++) gg3(d2, d3, fieldA, myQi) = -gg_temp.gg3[d2][d3] * d_alpha[fieldA + f_off] * d_invMass[fieldA + f_off]; 67152cdd6eaSMark } 672e0eea495SMark }); 67352cdd6eaSMark /* add electric field term once per IP */ 6749371c9d4SSatish Balay Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { gg2(dim - 1, fieldA, myQi) += d_Eq_m[fieldA + f_off]; }); 6758fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [=](const int &fieldA) { 676e0eea495SMark int d, d2, d3, dp; 677e0eea495SMark /* Jacobian transform - g2, g3 - per thread (2D) */ 678e0eea495SMark for (d = 0; d < dim; ++d) { 67952cdd6eaSMark g2(d, fieldA, myQi) = 0; 680e0eea495SMark for (d2 = 0; d2 < dim; ++d2) { 6818fdabdddSMark Adams g2(d, fieldA, myQi) += invJ[d * dim + d2] * gg2(d2, fieldA, myQi); 68252cdd6eaSMark g3(d, d2, fieldA, myQi) = 0; 683e0eea495SMark for (d3 = 0; d3 < dim; ++d3) { 684ad540459SPierre Jolivet for (dp = 0; dp < dim; ++dp) g3(d, d2, fieldA, myQi) += invJ[d * dim + d3] * gg3(d3, dp, fieldA, myQi) * invJ[d2 * dim + dp]; 685e0eea495SMark } 68652cdd6eaSMark g3(d, d2, fieldA, myQi) *= wj; 687e0eea495SMark } 68852cdd6eaSMark g2(d, fieldA, myQi) *= wj; 689e0eea495SMark } 690e0eea495SMark }); 69152cdd6eaSMark }); // Nq 692e0eea495SMark team.team_barrier(); 6931eec90e4SMark Adams { /* assemble */ 6948fdabdddSMark Adams for (PetscInt fieldA = 0; fieldA < loc_Nf; fieldA++) { 695930e68a5SMark Adams /* assemble */ 6961eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 6971eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 6981eec90e4SMark Adams PetscScalar t = 0; 6991eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 700e0eea495SMark const PetscReal *BJq = &d_BB[qj * Nb], *DIq = &d_DD[qj * Nb * dim]; 7011eec90e4SMark Adams for (int d = 0; d < dim; ++d) { 7021eec90e4SMark Adams t += DIq[f * dim + d] * g2(d, fieldA, qj) * BJq[g]; 703ad540459SPierre Jolivet for (int d2 = 0; d2 < dim; ++d2) t += DIq[f * dim + d] * g3(d, d2, fieldA, qj) * DIq[g * dim + d2]; 704e0eea495SMark } 705930e68a5SMark Adams } 7068a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { // CPU assembly 707bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7081eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 7098fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 710bfbbad94Smarkadams4 #endif 71119be780dSMark Adams } else { 7124c55d725SMark Adams static_cast<void>(landau_mat_assemble(d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch)); 71319be780dSMark Adams } 7141eec90e4SMark Adams }); 7151eec90e4SMark Adams }); 7161eec90e4SMark Adams } 717a587d139SMark } 71819be780dSMark Adams } // scope with 'grid' 71981451871SMark Adams }; 72071fb2364SMark Adams #if defined(PETSC_HAVE_HIP) 72171fb2364SMark Adams const int lbound2 = 1; 72271fb2364SMark Adams #else 72371fb2364SMark Adams const int lbound2 = 2; 72471fb2364SMark Adams #endif 7259566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[4], 0, 0, 0, 0)); 7269566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 7272d93f1a5SMark Adams PetscCall(PetscInfo(plex[0], "Jacobian shared memory size: %zu bytes in level %s (max shared=%zu), num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", jac_scr_bytes, jac_shared_level == 0 ? "local" : "global", maximum_shared_mem_size, (int)(num_cells_batch * batch_sz), team_size, vector_size, nfaces, (int)Nf_max)); 728b3d9744dSMark Adams Kokkos::parallel_for("Jacobian", Kokkos::TeamPolicy<Kokkos::LaunchBounds<256, lbound2>>(num_cells_batch * batch_sz, team_size, vector_size).set_scratch_size(jac_shared_level, Kokkos::PerTeam(jac_scr_bytes)), jac_lambda); 729d9008a5dSMark Adams Kokkos::fence(); 7309566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7319566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[4], 0, 0, 0, 0)); 73219be780dSMark Adams if (d_vertex_f_k) delete d_vertex_f_k; 733dbabbaf5SMark Adams } else { // mass 7349566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[16], 0, 0, 0, 0)); 7359566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 736dbabbaf5SMark Adams PetscCall(PetscInfo(plex[0], "Mass team size=%d vector size=%d #face=%d Nb=%" PetscInt_FMT ", %s assembly\n", team_size, vector_size, nfaces, Nb, d_coo_vals ? "COO" : "CSR")); 7379371c9d4SSatish Balay Kokkos::parallel_for( 738b3d9744dSMark Adams "Mass", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size), KOKKOS_LAMBDA(const team_member team) { 7398fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 7408a6f2e61SMark Adams // find my grid 7418fdabdddSMark Adams PetscInt grid = 0; 7428fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 7438a6f2e61SMark Adams { 744bfbbad94Smarkadams4 const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid], jpidx_0 = d_ip_offset[grid] + loc_elem * Nq; 745bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 746f44ea33cSmarkadams4 const PetscInt totDim = loc_Nf * Nb; 747bfbbad94Smarkadams4 #endif 7488fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 7498fdabdddSMark Adams for (int fieldA = 0; fieldA < loc_Nf; fieldA++) { 7501eec90e4SMark Adams /* assemble */ 7511eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 7521eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 7531eec90e4SMark Adams PetscScalar t = 0; 7541eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 7551eec90e4SMark Adams const PetscReal *BJq = &d_BB[qj * Nb]; 7568fdabdddSMark Adams const PetscInt jpidx_glb = jpidx_0 + qj; 7578a6f2e61SMark Adams if (dim == 2) { 7588fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g] * 2. * PETSC_PI; 7598a6f2e61SMark Adams } else { 7608fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g]; 7611eec90e4SMark Adams } 7628a6f2e61SMark Adams } 7638a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { 764bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7651eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 7668fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 767bfbbad94Smarkadams4 #endif 768ad4b5651SMark Adams } else { 7694c55d725SMark Adams static_cast<void>(landau_mat_assemble(d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch)); 770ad4b5651SMark Adams } 771e0eea495SMark }); 772e0eea495SMark }); 77313241b68SMark Adams } // field 77413241b68SMark Adams } // grid 7751eec90e4SMark Adams }); 776d9008a5dSMark Adams Kokkos::fence(); 7779566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7789566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[16], 0, 0, 0, 0)); 7791eec90e4SMark Adams } 780bfc784b7SMark Adams if (d_coo_vals) { 7819566063dSJacob Faibussowitsch PetscCall(MatSetValuesCOO(JacP, d_coo_vals, ADD_VALUES)); 782*beceaeb6SBarry Smith #if !defined(LAND_SUPPORT_CPU_ASS) 783bfbbad94Smarkadams4 Kokkos::fence(); // for timers 784bfbbad94Smarkadams4 #endif 785bfc784b7SMark Adams } else if (elem_mat_num_cells_max_grid) { // CPU assembly 786bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7878fdabdddSMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight>::HostMirror h_elem_mats = Kokkos::create_mirror_view(d_elem_mats); 788e0eea495SMark Kokkos::deep_copy(h_elem_mats, d_elem_mats); 789d618d24fSMark Adams PetscCheck(!container, PETSC_COMM_SELF, PETSC_ERR_PLIB, "?????"); 7908fdabdddSMark Adams for (PetscInt b_id = 0; b_id < batch_sz; b_id++) { // OpenMP (once) 7918a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 7928a6f2e61SMark Adams PetscSection section, globalSection; 7938a6f2e61SMark Adams PetscInt cStart, cEnd; 7948fdabdddSMark Adams Mat B = subJ[LAND_PACK_IDX(b_id, grid)]; 7958fdabdddSMark Adams PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, a_mat_offset), nloc, nzl, colbuf[1024], row; 7968fdabdddSMark Adams const PetscInt *cols; 7978fdabdddSMark Adams const PetscScalar *vals; 7989566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[5], 0, 0, 0, 0)); 7999566063dSJacob Faibussowitsch PetscCall(DMPlexGetHeightStratum(plex[grid], 0, &cStart, &cEnd)); 8009566063dSJacob Faibussowitsch PetscCall(DMGetLocalSection(plex[grid], §ion)); 8019566063dSJacob Faibussowitsch PetscCall(DMGetGlobalSection(plex[grid], &globalSection)); 8029566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[5], 0, 0, 0, 0)); 8039566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[6], 0, 0, 0, 0)); 8048a6f2e61SMark Adams for (PetscInt ej = cStart; ej < cEnd; ++ej) { 8058fdabdddSMark Adams const PetscScalar *elMat = &h_elem_mats(b_id, grid, ej - cStart, 0); 8069566063dSJacob Faibussowitsch PetscCall(DMPlexMatSetClosure(plex[grid], section, globalSection, B, ej, elMat, ADD_VALUES)); 8078a6f2e61SMark Adams if (grid == 0 && ej == -1) { 808f44ea33cSmarkadams4 const PetscInt loc_Nf = a_species_offset[grid + 1] - a_species_offset[grid], totDim = loc_Nf * Nb; 809e0eea495SMark int d, f; 8108a6f2e61SMark Adams PetscPrintf(PETSC_COMM_SELF, "Kokkos Element matrix %d/%d\n", 1, (int)a_numCells[grid]); 811e0eea495SMark for (d = 0; d < totDim; ++d) { 81252cdd6eaSMark for (f = 0; f < totDim; ++f) PetscPrintf(PETSC_COMM_SELF, " %12.5e", PetscRealPart(elMat[d * totDim + f])); 81352cdd6eaSMark PetscPrintf(PETSC_COMM_SELF, "\n"); 814e0eea495SMark } 815e8d2b73aSMark Adams exit(14); 816e0eea495SMark } 817e0eea495SMark } 8188fdabdddSMark Adams // move nest matrix to global JacP 8199566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 8209566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 8219566063dSJacob Faibussowitsch PetscCall(MatGetSize(B, &nloc, NULL)); 8228a6f2e61SMark Adams for (int i = 0; i < nloc; i++) { 8239566063dSJacob Faibussowitsch PetscCall(MatGetRow(B, i, &nzl, &cols, &vals)); 82463a3b9bcSJacob Faibussowitsch PetscCheck(nzl <= 1024, PetscObjectComm((PetscObject)B), PETSC_ERR_PLIB, "Row too big: %" PetscInt_FMT, nzl); 8258a6f2e61SMark Adams for (int j = 0; j < nzl; j++) colbuf[j] = cols[j] + moffset; 8268a6f2e61SMark Adams row = i + moffset; 8279566063dSJacob Faibussowitsch PetscCall(MatSetValues(JacP, 1, &row, nzl, colbuf, vals, ADD_VALUES)); 8289566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(B, i, &nzl, &cols, &vals)); 8298a6f2e61SMark Adams } 8309566063dSJacob Faibussowitsch PetscCall(MatDestroy(&subJ[LAND_PACK_IDX(b_id, grid)])); 8319566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[6], 0, 0, 0, 0)); 8328a6f2e61SMark Adams } // grids 833a587d139SMark } 834bfbbad94Smarkadams4 #else 835bfbbad94Smarkadams4 SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "CPU assembly not supported"); 836bfbbad94Smarkadams4 #endif 8378fdabdddSMark Adams } 8383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 839e0eea495SMark } 840e0eea495SMark } // extern "C" 8418d80707aSStefano Zampini #endif 842