1e0eea495SMark /* 2e0eea495SMark Implements the Kokkos kernel 3e0eea495SMark */ 4e0eea495SMark #include <petscconf.h> 511d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 6e0eea495SMark #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 7*a16fd2c9SJacob Faibussowitsch #include <petsc/private/deviceimpl.h> 8e0eea495SMark #include <petsclandau.h> 9e0eea495SMark #include <petscts.h> 10a587d139SMark 11e0eea495SMark #include <Kokkos_Core.hpp> 12e0eea495SMark #include <cstdio> 13e0eea495SMark typedef Kokkos::TeamPolicy<>::member_type team_member; 14e0eea495SMark #include "../land_tensors.h" 15a587d139SMark #include <petscaijdevice.h> 16e0eea495SMark 17e0eea495SMark namespace landau_inner_red { // namespace helps with name resolution in reduction identity 1852cdd6eaSMark template <class ScalarType> 19e0eea495SMark struct array_type { 2052cdd6eaSMark ScalarType gg2[LANDAU_DIM]; 2152cdd6eaSMark ScalarType gg3[LANDAU_DIM][LANDAU_DIM]; 22e0eea495SMark 23e0eea495SMark KOKKOS_INLINE_FUNCTION // Default constructor - Initialize to 0's 24e0eea495SMark array_type() { 25e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 2652cdd6eaSMark gg2[j] = 0; 27ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = 0; 28e0eea495SMark } 29e0eea495SMark } 30e0eea495SMark KOKKOS_INLINE_FUNCTION // Copy Constructor 31e0eea495SMark array_type(const array_type &rhs) { 32e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 3352cdd6eaSMark gg2[j] = rhs.gg2[j]; 34ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = rhs.gg3[j][k]; 35e0eea495SMark } 36e0eea495SMark } 37e0eea495SMark KOKKOS_INLINE_FUNCTION // add operator 389371c9d4SSatish Balay array_type & 399371c9d4SSatish Balay operator+=(const array_type &src) { 40e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 4152cdd6eaSMark gg2[j] += src.gg2[j]; 42ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 43e0eea495SMark } 44e0eea495SMark return *this; 45e0eea495SMark } 46e0eea495SMark KOKKOS_INLINE_FUNCTION // volatile add operator 479371c9d4SSatish Balay void 489371c9d4SSatish Balay operator+=(const volatile array_type &src) volatile { 49e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 5052cdd6eaSMark gg2[j] += src.gg2[j]; 51ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 52e0eea495SMark } 53e0eea495SMark } 54e0eea495SMark }; 5552cdd6eaSMark typedef array_type<PetscReal> TensorValueType; // used to simplify code below 569371c9d4SSatish Balay } // namespace landau_inner_red 57e0eea495SMark 58e0eea495SMark namespace Kokkos { //reduction identity must be defined in Kokkos namespace 59e0eea495SMark template <> 6052cdd6eaSMark struct reduction_identity<landau_inner_red::TensorValueType> { 619371c9d4SSatish Balay KOKKOS_FORCEINLINE_FUNCTION static landau_inner_red::TensorValueType sum() { return landau_inner_red::TensorValueType(); } 62e0eea495SMark }; 639371c9d4SSatish Balay } // namespace Kokkos 64e0eea495SMark 65e0eea495SMark extern "C" { 669371c9d4SSatish Balay PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps maps[], pointInterpolationP4est (*pointMaps)[LANDAU_MAX_Q_FACE], PetscInt Nf[], PetscInt Nq, PetscInt grid) { 67a587d139SMark P4estVertexMaps h_maps; /* host container */ 688a6f2e61SMark Adams const Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_points((pointInterpolationP4est *)pointMaps, maps[grid].num_reduced); 698a6f2e61SMark Adams const Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_gidx((LandauIdx *)maps[grid].gIdx, maps[grid].num_elements); 708a6f2e61SMark Adams Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *d_points = new Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight>("points", maps[grid].num_reduced); 718a6f2e61SMark Adams Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight> *d_gidx = new Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight>("gIdx", maps[grid].num_elements); 72a587d139SMark 73a587d139SMark PetscFunctionBegin; 74a587d139SMark Kokkos::deep_copy(*d_gidx, h_gidx); 75a587d139SMark Kokkos::deep_copy(*d_points, h_points); 768a6f2e61SMark Adams h_maps.num_elements = maps[grid].num_elements; 778a6f2e61SMark Adams h_maps.num_face = maps[grid].num_face; 788a6f2e61SMark Adams h_maps.num_reduced = maps[grid].num_reduced; 798a6f2e61SMark Adams h_maps.deviceType = maps[grid].deviceType; 808a6f2e61SMark Adams h_maps.numgrids = maps[grid].numgrids; 818a6f2e61SMark Adams h_maps.Nf = Nf[grid]; 82a587d139SMark h_maps.c_maps = (pointInterpolationP4est(*)[LANDAU_MAX_Q_FACE])d_points->data(); 838a6f2e61SMark Adams maps[grid].vp1 = (void *)d_points; 84a587d139SMark h_maps.gIdx = (LandauIdx(*)[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ])d_gidx->data(); 858a6f2e61SMark Adams maps[grid].vp2 = (void *)d_gidx; 86a587d139SMark { 87a587d139SMark Kokkos::View<P4estVertexMaps, Kokkos::HostSpace> h_maps_k(&h_maps); 8811d22bbfSJunchao Zhang Kokkos::View<P4estVertexMaps> *d_maps_k = new Kokkos::View<P4estVertexMaps>(Kokkos::create_mirror(Kokkos::DefaultExecutionSpace::memory_space(), h_maps_k)); 89a587d139SMark Kokkos::deep_copy(*d_maps_k, h_maps_k); 908a6f2e61SMark Adams maps[grid].d_self = d_maps_k->data(); 918a6f2e61SMark Adams maps[grid].vp3 = (void *)d_maps_k; 92a587d139SMark } 93a587d139SMark PetscFunctionReturn(0); 94a587d139SMark } 959371c9d4SSatish Balay PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps maps[], PetscInt num_grids) { 96362febeeSStefano Zampini PetscFunctionBegin; 978a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 988a6f2e61SMark Adams auto a = static_cast<Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *>(maps[grid].vp1); 998a6f2e61SMark Adams auto b = static_cast<Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight> *>(maps[grid].vp2); 1008a6f2e61SMark Adams auto c = static_cast<Kokkos::View<P4estVertexMaps *> *>(maps[grid].vp3); 1019371c9d4SSatish Balay delete a; 1029371c9d4SSatish Balay delete b; 1039371c9d4SSatish Balay delete c; 1048a6f2e61SMark Adams } 105a587d139SMark PetscFunctionReturn(0); 106a587d139SMark } 107a587d139SMark 1089371c9d4SSatish Balay PetscErrorCode LandauKokkosStaticDataSet(DM plex, const PetscInt Nq, const PetscInt batch_sz, const PetscInt num_grids, PetscInt a_numCells[], PetscInt a_species_offset[], PetscInt a_mat_offset[], PetscReal a_nu_alpha[], PetscReal a_nu_beta[], PetscReal a_invMass[], PetscReal a_invJ[], PetscReal a_x[], PetscReal a_y[], PetscReal a_z[], PetscReal a_w[], LandauStaticData *SData_d) { 109e0eea495SMark PetscReal *BB, *DD; 110e8d2b73aSMark Adams PetscTabulation *Tf; 1118a6f2e61SMark Adams PetscInt dim; 1128a6f2e61SMark Adams PetscInt Nb = Nq, ip_offset[LANDAU_MAX_GRIDS + 1], ipf_offset[LANDAU_MAX_GRIDS + 1], elem_offset[LANDAU_MAX_GRIDS + 1], nip, IPf_sz, Nftot; 113e8d2b73aSMark Adams PetscDS prob; 114e0eea495SMark 115e0eea495SMark PetscFunctionBegin; 1169566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex, &dim)); 1179566063dSJacob Faibussowitsch PetscCall(DMGetDS(plex, &prob)); 11863a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 1199566063dSJacob Faibussowitsch PetscCall(PetscDSGetTabulation(prob, &Tf)); 1209371c9d4SSatish Balay BB = Tf[0]->T[0]; 1219371c9d4SSatish Balay DD = Tf[0]->T[1]; 1228a6f2e61SMark Adams ip_offset[0] = ipf_offset[0] = elem_offset[0] = 0; 1238a6f2e61SMark Adams nip = 0; 1248a6f2e61SMark Adams IPf_sz = 0; 1258a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 1268a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 1278a6f2e61SMark Adams elem_offset[grid + 1] = elem_offset[grid] + a_numCells[grid]; 1288a6f2e61SMark Adams nip += a_numCells[grid] * Nq; 1298a6f2e61SMark Adams ip_offset[grid + 1] = nip; 1308a6f2e61SMark Adams IPf_sz += Nq * nfloc * a_numCells[grid]; 1318a6f2e61SMark Adams ipf_offset[grid + 1] = IPf_sz; 1328a6f2e61SMark Adams } 1338a6f2e61SMark Adams Nftot = a_species_offset[num_grids]; 1349566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 135e8d2b73aSMark Adams { 1368a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_alpha(a_nu_alpha, Nftot); 1378a6f2e61SMark Adams auto alpha = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("alpha", Nftot); 138e8d2b73aSMark Adams SData_d->alpha = static_cast<void *>(alpha); 1398a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_beta(a_nu_beta, Nftot); 1408a6f2e61SMark Adams auto beta = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("beta", Nftot); 141e8d2b73aSMark Adams SData_d->beta = static_cast<void *>(beta); 1428a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invMass(a_invMass, Nftot); 1438a6f2e61SMark Adams auto invMass = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invMass", Nftot); 144e8d2b73aSMark Adams SData_d->invMass = static_cast<void *>(invMass); 145e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_BB(BB, Nq * Nb); 146e8d2b73aSMark Adams auto B = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("B", Nq * Nb); 147e8d2b73aSMark Adams SData_d->B = static_cast<void *>(B); 148e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_DD(DD, Nq * Nb * dim); 149e8d2b73aSMark Adams auto D = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("D", Nq * Nb * dim); 150e8d2b73aSMark Adams SData_d->D = static_cast<void *>(D); 151e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invJ(a_invJ, nip * dim * dim); 152e8d2b73aSMark Adams auto invJ = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invJ", nip * dim * dim); 153e8d2b73aSMark Adams SData_d->invJ = static_cast<void *>(invJ); 154e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_x(a_x, nip); 155e8d2b73aSMark Adams auto x = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("x", nip); 156e8d2b73aSMark Adams SData_d->x = static_cast<void *>(x); 157e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_y(a_y, nip); 158e8d2b73aSMark Adams auto y = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("y", nip); 159e8d2b73aSMark Adams SData_d->y = static_cast<void *>(y); 160e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_w(a_w, nip); 161e8d2b73aSMark Adams auto w = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("w", nip); 162e8d2b73aSMark Adams SData_d->w = static_cast<void *>(w); 163e8d2b73aSMark Adams 164e8d2b73aSMark Adams Kokkos::deep_copy(*alpha, h_alpha); 165e8d2b73aSMark Adams Kokkos::deep_copy(*beta, h_beta); 166e8d2b73aSMark Adams Kokkos::deep_copy(*invMass, h_invMass); 167e8d2b73aSMark Adams Kokkos::deep_copy(*B, h_BB); 168e8d2b73aSMark Adams Kokkos::deep_copy(*D, h_DD); 169e8d2b73aSMark Adams Kokkos::deep_copy(*invJ, h_invJ); 170e8d2b73aSMark Adams Kokkos::deep_copy(*x, h_x); 171e8d2b73aSMark Adams Kokkos::deep_copy(*y, h_y); 172e8d2b73aSMark Adams Kokkos::deep_copy(*w, h_w); 173e8d2b73aSMark Adams 1748a6f2e61SMark Adams if (dim == 3) { 175984ed092SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_z(a_z, nip); 1768a6f2e61SMark Adams auto z = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("z", nip); 1778a6f2e61SMark Adams SData_d->z = static_cast<void *>(z); 1788a6f2e61SMark Adams Kokkos::deep_copy(*z, h_z); 1798a6f2e61SMark Adams } else SData_d->z = NULL; 1808a6f2e61SMark Adams 1818a6f2e61SMark Adams // 1828a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_NCells(a_numCells, num_grids); 1838a6f2e61SMark Adams auto nc = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("NCells", num_grids); 1848a6f2e61SMark Adams SData_d->NCells = static_cast<void *>(nc); 1858a6f2e61SMark Adams Kokkos::deep_copy(*nc, h_NCells); 1868a6f2e61SMark Adams 1878a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_species_offset(a_species_offset, num_grids + 1); 1888a6f2e61SMark Adams auto soff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("species_offset", num_grids + 1); 1898a6f2e61SMark Adams SData_d->species_offset = static_cast<void *>(soff); 1908a6f2e61SMark Adams Kokkos::deep_copy(*soff, h_species_offset); 1918a6f2e61SMark Adams 1928a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_mat_offset(a_mat_offset, num_grids + 1); 1938a6f2e61SMark Adams auto moff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("mat_offset", num_grids + 1); 1948a6f2e61SMark Adams SData_d->mat_offset = static_cast<void *>(moff); 1958a6f2e61SMark Adams Kokkos::deep_copy(*moff, h_mat_offset); 1968a6f2e61SMark Adams 1978a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ip_offset(ip_offset, num_grids + 1); 1988a6f2e61SMark Adams auto ipoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ip_offset", num_grids + 1); 1998a6f2e61SMark Adams SData_d->ip_offset = static_cast<void *>(ipoff); 2008a6f2e61SMark Adams Kokkos::deep_copy(*ipoff, h_ip_offset); 2018a6f2e61SMark Adams 2028a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_elem_offset(elem_offset, num_grids + 1); 2038a6f2e61SMark Adams auto eoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("elem_offset", num_grids + 1); 2048a6f2e61SMark Adams SData_d->elem_offset = static_cast<void *>(eoff); 2058a6f2e61SMark Adams Kokkos::deep_copy(*eoff, h_elem_offset); 2068a6f2e61SMark Adams 2078a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ipf_offset(ipf_offset, num_grids + 1); 2088a6f2e61SMark Adams auto ipfoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ipf_offset", num_grids + 1); 2098a6f2e61SMark Adams SData_d->ipf_offset = static_cast<void *>(ipfoff); 2108a6f2e61SMark Adams Kokkos::deep_copy(*ipfoff, h_ipf_offset); 2118a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 2128fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutLeft>("fdf", batch_sz, dim + 1, IPf_sz); 2138a6f2e61SMark Adams #else 2148fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutRight>("fdf", batch_sz, dim + 1, IPf_sz); 2158a6f2e61SMark Adams #endif 2168a6f2e61SMark Adams SData_d->ipfdf_data = static_cast<void *>(ipfdf_data); 2178fdabdddSMark Adams auto Eq_m = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("Eq_m", Nftot); // allocate but do not set, same for whole batch 218e8d2b73aSMark Adams SData_d->Eq_m = static_cast<void *>(Eq_m); 219cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_offsets((LandauIdx *)SData_d->coo_elem_offsets, SData_d->coo_n_cellsTot + 1); 220cada7fc7SMark Adams auto coo_elem_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot + 1); 221cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_fullNb((LandauIdx *)SData_d->coo_elem_fullNb, SData_d->coo_n_cellsTot); 222cada7fc7SMark Adams auto coo_elem_fullNb = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot); 223cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_point_offsets((LandauIdx *)SData_d->coo_elem_point_offsets, SData_d->coo_n_cellsTot * (LANDAU_MAX_NQ + 1)); 224cada7fc7SMark Adams auto coo_elem_point_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_point_offsets", SData_d->coo_n_cellsTot * (LANDAU_MAX_NQ + 1)); 225bfc784b7SMark Adams // assign & copy 226bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_offsets, h_coo_elem_offsets); 227bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_fullNb, h_coo_elem_fullNb); 228bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_point_offsets, h_coo_elem_point_offsets); 229bfc784b7SMark Adams // need to free this now and use pointer space 2309566063dSJacob Faibussowitsch PetscCall(PetscFree3(SData_d->coo_elem_offsets, SData_d->coo_elem_fullNb, SData_d->coo_elem_point_offsets)); 231cada7fc7SMark Adams SData_d->coo_elem_offsets = static_cast<void *>(coo_elem_offsets); 232cada7fc7SMark Adams SData_d->coo_elem_fullNb = static_cast<void *>(coo_elem_fullNb); 233cada7fc7SMark Adams SData_d->coo_elem_point_offsets = static_cast<void *>(coo_elem_point_offsets); 234a31f6053SMark Adams auto coo_vals = new Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace>("coo_vals", SData_d->coo_size); 235a31f6053SMark Adams SData_d->coo_vals = static_cast<void *>(coo_vals); 236e8d2b73aSMark Adams } 2378a6f2e61SMark Adams SData_d->maps = NULL; // not used 238e8d2b73aSMark Adams PetscFunctionReturn(0); 239e8d2b73aSMark Adams } 240e8d2b73aSMark Adams 2419371c9d4SSatish Balay PetscErrorCode LandauKokkosStaticDataClear(LandauStaticData *SData_d) { 242e8d2b73aSMark Adams PetscFunctionBegin; 243e8d2b73aSMark Adams if (SData_d->alpha) { 244e8d2b73aSMark Adams auto alpha = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); 245e8d2b73aSMark Adams delete alpha; 2468a6f2e61SMark Adams SData_d->alpha = NULL; 247e8d2b73aSMark Adams auto beta = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 248e8d2b73aSMark Adams delete beta; 249e8d2b73aSMark Adams auto invMass = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 250e8d2b73aSMark Adams delete invMass; 251e8d2b73aSMark Adams auto B = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 252e8d2b73aSMark Adams delete B; 253e8d2b73aSMark Adams auto D = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 254e8d2b73aSMark Adams delete D; 255e8d2b73aSMark Adams auto invJ = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); 256e8d2b73aSMark Adams delete invJ; 257e8d2b73aSMark Adams auto x = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); 258e8d2b73aSMark Adams delete x; 259e8d2b73aSMark Adams auto y = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); 260e8d2b73aSMark Adams delete y; 2618a6f2e61SMark Adams if (SData_d->z) { 262e8d2b73aSMark Adams auto z = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); 263e8d2b73aSMark Adams delete z; 2648a6f2e61SMark Adams } 2658a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 2668fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 2678a6f2e61SMark Adams #else 2688fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 2698a6f2e61SMark Adams #endif 2708a6f2e61SMark Adams delete z; 271e8d2b73aSMark Adams auto w = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); 272e8d2b73aSMark Adams delete w; 273e8d2b73aSMark Adams auto Eq_m = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); 274e8d2b73aSMark Adams delete Eq_m; 2758a6f2e61SMark Adams // offset 2768a6f2e61SMark Adams auto nc = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 2778a6f2e61SMark Adams delete nc; 2788a6f2e61SMark Adams auto soff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 2798a6f2e61SMark Adams delete soff; 2808a6f2e61SMark Adams auto moff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 2818a6f2e61SMark Adams delete moff; 2828a6f2e61SMark Adams auto ipoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 2838a6f2e61SMark Adams delete ipoff; 2848a6f2e61SMark Adams auto eoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 2858a6f2e61SMark Adams delete eoff; 2868a6f2e61SMark Adams auto ipfoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 2878a6f2e61SMark Adams delete ipfoff; 288bfc784b7SMark Adams auto coo_elem_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_offsets); 289bfc784b7SMark Adams delete coo_elem_offsets; 290bfc784b7SMark Adams auto coo_elem_fullNb = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_fullNb); 291bfc784b7SMark Adams delete coo_elem_fullNb; 292cada7fc7SMark Adams auto coo_elem_point_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_point_offsets); 293bfc784b7SMark Adams delete coo_elem_point_offsets; 294bfc784b7SMark Adams SData_d->coo_elem_offsets = NULL; 295bfc784b7SMark Adams SData_d->coo_elem_point_offsets = NULL; 296bfc784b7SMark Adams SData_d->coo_elem_fullNb = NULL; 297a31f6053SMark Adams auto coo_vals = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace> *>((void *)SData_d->coo_vals); 298a31f6053SMark Adams delete coo_vals; 299af0767daSMark Adams } 300e8d2b73aSMark Adams PetscFunctionReturn(0); 301e8d2b73aSMark Adams } 302e8d2b73aSMark Adams 30359118022SMark Adams #define KOKKOS_SHARED_LEVEL 0 // 0 is shared, 1 is global 30459118022SMark Adams 3058a6f2e61SMark Adams KOKKOS_INLINE_FUNCTION 3069371c9d4SSatish Balay PetscErrorCode landau_mat_assemble(PetscSplitCSRDataStructure d_mat, PetscScalar *coo_vals, const PetscScalar Aij, const PetscInt f, const PetscInt g, const PetscInt Nb, PetscInt moffset, const PetscInt elem, const PetscInt fieldA, const P4estVertexMaps *d_maps, const LandauIdx coo_elem_offsets[], const LandauIdx coo_elem_fullNb[], const LandauIdx (*coo_elem_point_offsets)[LANDAU_MAX_NQ + 1], const PetscInt glb_elem_idx, const PetscInt bid_coo_sz_batch) { 307ad4b5651SMark Adams PetscInt idx, q, nr, nc, d; 3088a6f2e61SMark Adams const LandauIdx *const Idxs = &d_maps->gIdx[elem][fieldA][0]; 309bfc784b7SMark Adams PetscScalar row_scale[LANDAU_MAX_Q_FACE] = {0}, col_scale[LANDAU_MAX_Q_FACE] = {0}; 310bfc784b7SMark Adams if (coo_vals) { // mirror (i,j) in CreateStaticGPUData 311bfc784b7SMark Adams const int fullNb = coo_elem_fullNb[glb_elem_idx], fullNb2 = fullNb * fullNb; 312bfc784b7SMark Adams idx = Idxs[f]; 313bfc784b7SMark Adams if (idx >= 0) { 314bfc784b7SMark Adams nr = 1; 315bfc784b7SMark Adams row_scale[0] = 1.; 316bfc784b7SMark Adams } else { 317bfc784b7SMark Adams idx = -idx - 1; 318bfc784b7SMark Adams for (q = 0, nr = 0; q < d_maps->num_face; q++, nr++) { 319bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 320bfc784b7SMark Adams row_scale[q] = d_maps->c_maps[idx][q].scale; 321bfc784b7SMark Adams } 322bfc784b7SMark Adams } 323bfc784b7SMark Adams idx = Idxs[g]; 324bfc784b7SMark Adams if (idx >= 0) { 325bfc784b7SMark Adams nc = 1; 326bfc784b7SMark Adams col_scale[0] = 1.; 327bfc784b7SMark Adams } else { 328bfc784b7SMark Adams idx = -idx - 1; 329bfc784b7SMark Adams nc = d_maps->num_face; 330bfc784b7SMark Adams for (q = 0, nc = 0; q < d_maps->num_face; q++, nc++) { 331bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 332bfc784b7SMark Adams col_scale[q] = d_maps->c_maps[idx][q].scale; 333bfc784b7SMark Adams } 334bfc784b7SMark Adams } 335cada7fc7SMark Adams const int idx0 = bid_coo_sz_batch + coo_elem_offsets[glb_elem_idx] + fieldA * fullNb2 + fullNb * coo_elem_point_offsets[glb_elem_idx][f] + nr * coo_elem_point_offsets[glb_elem_idx][g]; 336bfc784b7SMark Adams for (int q = 0, idx2 = idx0; q < nr; q++) { 337ad540459SPierre Jolivet for (int d = 0; d < nc; d++, idx2++) coo_vals[idx2] = row_scale[q] * col_scale[d] * Aij; 338bfc784b7SMark Adams } 339bfc784b7SMark Adams } else { 340bfc784b7SMark Adams PetscScalar vals[LANDAU_MAX_Q_FACE * LANDAU_MAX_Q_FACE] = {0}; 341ad4b5651SMark Adams PetscInt rows[LANDAU_MAX_Q_FACE], cols[LANDAU_MAX_Q_FACE]; 342ad4b5651SMark Adams idx = Idxs[f]; 3438a6f2e61SMark Adams if (idx >= 0) { 3448a6f2e61SMark Adams nr = 1; 345ad4b5651SMark Adams rows[0] = idx; 346ad4b5651SMark Adams row_scale[0] = 1.; 3478a6f2e61SMark Adams } else { 348ad4b5651SMark Adams idx = -idx - 1; 349ad4b5651SMark Adams for (q = 0, nr = 0; q < d_maps->num_face; q++, nr++) { 350ad4b5651SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 351ad4b5651SMark Adams rows[q] = d_maps->c_maps[idx][q].gid; 352ad4b5651SMark Adams row_scale[q] = d_maps->c_maps[idx][q].scale; 3538a6f2e61SMark Adams } 354ad4b5651SMark Adams } 355ad4b5651SMark Adams idx = Idxs[g]; 3568a6f2e61SMark Adams if (idx >= 0) { 3578a6f2e61SMark Adams nc = 1; 358ad4b5651SMark Adams cols[0] = idx; 359ad4b5651SMark Adams col_scale[0] = 1.; 3608a6f2e61SMark Adams } else { 361ad4b5651SMark Adams idx = -idx - 1; 362ad4b5651SMark Adams for (q = 0, nc = 0; q < d_maps->num_face; q++, nc++) { 363ad4b5651SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 364ad4b5651SMark Adams cols[q] = d_maps->c_maps[idx][q].gid; 365ad4b5651SMark Adams col_scale[q] = d_maps->c_maps[idx][q].scale; 3668a6f2e61SMark Adams } 367ad4b5651SMark Adams } 368bfc784b7SMark Adams 369ad4b5651SMark Adams for (q = 0; q < nr; q++) rows[q] = rows[q] + moffset; 370ad4b5651SMark Adams for (q = 0; q < nc; q++) cols[q] = cols[q] + moffset; 3718a6f2e61SMark Adams for (q = 0; q < nr; q++) { 372ad540459SPierre Jolivet for (d = 0; d < nc; d++) vals[q * nc + d] = row_scale[q] * col_scale[d] * Aij; 3738a6f2e61SMark Adams } 374ad4b5651SMark Adams MatSetValuesDevice(d_mat, nr, rows, nc, cols, vals, ADD_VALUES); 375bfc784b7SMark Adams } 3768a6f2e61SMark Adams return 0; 3778a6f2e61SMark Adams } 3788a6f2e61SMark Adams 3799371c9d4SSatish Balay PetscErrorCode LandauKokkosJacobian(DM plex[], const PetscInt Nq, const PetscInt batch_sz, const PetscInt num_grids, const PetscInt a_numCells[], PetscReal a_Eq_m[], PetscScalar a_elem_closure[], const PetscScalar a_xarray[], const LandauStaticData *SData_d, const PetscReal shift, const PetscLogEvent events[], const PetscInt a_mat_offset[], const PetscInt a_species_offset[], Mat subJ[], Mat JacP) { 380e8d2b73aSMark Adams using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 38119be780dSMark Adams using real2_scr_t = Kokkos::View<PetscScalar **, Kokkos::LayoutRight, scr_mem_t>; 382e8d2b73aSMark Adams using g2_scr_t = Kokkos::View<PetscReal ***, Kokkos::LayoutRight, scr_mem_t>; 383e8d2b73aSMark Adams using g3_scr_t = Kokkos::View<PetscReal ****, Kokkos::LayoutRight, scr_mem_t>; 3848fdabdddSMark Adams PetscInt Nb = Nq, dim, num_cells_max, Nf_max, num_cells_batch; 385dbabbaf5SMark Adams int nfaces = 0, vector_size = 512 / Nq; 386e8d2b73aSMark Adams LandauCtx *ctx; 387e8d2b73aSMark Adams PetscReal *d_Eq_m = NULL; 3888a6f2e61SMark Adams PetscScalar *d_vertex_f = NULL; 3898a6f2e61SMark Adams P4estVertexMaps *maps[LANDAU_MAX_GRIDS]; // this gets captured 3908a6f2e61SMark Adams PetscSplitCSRDataStructure d_mat; 3918fdabdddSMark Adams PetscContainer container; 392bd08a171SMark Adams const int conc = Kokkos::DefaultExecutionSpace().concurrency(), openmp = !!(conc < 1000), team_size = (openmp == 0) ? Nq : 1; 393bfc784b7SMark Adams const PetscInt coo_sz_batch = SData_d->coo_size / batch_sz; // capture 394e8d2b73aSMark Adams auto d_alpha_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); //static data 395e8d2b73aSMark Adams const PetscReal *d_alpha = d_alpha_k->data(); 3968a6f2e61SMark Adams const PetscInt Nftot = d_alpha_k->size(); // total number of species 397e8d2b73aSMark Adams auto d_beta_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 398e8d2b73aSMark Adams const PetscReal *d_beta = d_beta_k->data(); 399e8d2b73aSMark Adams auto d_invMass_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 400e8d2b73aSMark Adams const PetscReal *d_invMass = d_invMass_k->data(); 401e8d2b73aSMark Adams auto d_B_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 402e8d2b73aSMark Adams const PetscReal *d_BB = d_B_k->data(); 403e8d2b73aSMark Adams auto d_D_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 404e8d2b73aSMark Adams const PetscReal *d_DD = d_D_k->data(); 405e8d2b73aSMark Adams auto d_invJ_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); // use Kokkos vector in kernels 406e8d2b73aSMark Adams auto d_x_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); //static data 407e8d2b73aSMark Adams const PetscReal *d_x = d_x_k->data(); 408e8d2b73aSMark Adams auto d_y_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); //static data 409e8d2b73aSMark Adams const PetscReal *d_y = d_y_k->data(); 410e8d2b73aSMark Adams auto d_z_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); //static data 4118a6f2e61SMark Adams const PetscReal *d_z = (LANDAU_DIM == 3) ? d_z_k->data() : NULL; 4128a6f2e61SMark Adams auto d_w_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); //static data 4138a6f2e61SMark Adams const PetscReal *d_w = d_w_k.data(); 4148fdabdddSMark Adams // grid offsets - single vertex grid data 4158a6f2e61SMark Adams auto d_numCells_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 4168a6f2e61SMark Adams const PetscInt *d_numCells = d_numCells_k->data(); 4178a6f2e61SMark Adams auto d_species_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 4188a6f2e61SMark Adams const PetscInt *d_species_offset = d_species_offset_k->data(); 4198a6f2e61SMark Adams auto d_mat_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 4208a6f2e61SMark Adams const PetscInt *d_mat_offset = d_mat_offset_k->data(); 4218a6f2e61SMark Adams auto d_ip_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 4228a6f2e61SMark Adams const PetscInt *d_ip_offset = d_ip_offset_k->data(); 4238a6f2e61SMark Adams auto d_ipf_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 4248a6f2e61SMark Adams const PetscInt *d_ipf_offset = d_ipf_offset_k->data(); 4258a6f2e61SMark Adams auto d_elem_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 4268a6f2e61SMark Adams const PetscInt *d_elem_offset = d_elem_offset_k->data(); 4278fdabdddSMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, including batched vertices 4288fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 4298a6f2e61SMark Adams #else 4308fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutRight> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 4318a6f2e61SMark Adams #endif 4328fdabdddSMark Adams auto d_Eq_m_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); // static storage, dynamci data - E(t), copy later, single vertex 433bfc784b7SMark Adams // COO 434cada7fc7SMark Adams auto d_coo_elem_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_offsets); 435cada7fc7SMark Adams LandauIdx *d_coo_elem_offsets = (SData_d->coo_size == 0) ? NULL : d_coo_elem_offsets_k->data(); 436cada7fc7SMark Adams auto d_coo_elem_fullNb_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_fullNb); 437cada7fc7SMark Adams LandauIdx *d_coo_elem_fullNb = (SData_d->coo_size == 0) ? NULL : d_coo_elem_fullNb_k->data(); 438cada7fc7SMark Adams auto d_coo_elem_point_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_point_offsets); 439cada7fc7SMark Adams LandauIdx(*d_coo_elem_point_offsets)[LANDAU_MAX_NQ + 1] = (SData_d->coo_size == 0) ? NULL : (LandauIdx(*)[LANDAU_MAX_NQ + 1]) d_coo_elem_point_offsets_k->data(); 440a31f6053SMark Adams auto d_coo_vals_k = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight> *>(SData_d->coo_vals); 441a31f6053SMark Adams PetscScalar *d_coo_vals = (SData_d->coo_size == 0) ? NULL : d_coo_vals_k->data(); 4428fdabdddSMark Adams 443e8d2b73aSMark Adams PetscFunctionBegin; 444a31f6053SMark Adams while (vector_size & (vector_size - 1)) vector_size = vector_size & (vector_size - 1); 445dbabbaf5SMark Adams if (vector_size > 16) vector_size = 16; // printf("DEBUG\n"); 4469566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[3], 0, 0, 0, 0)); 4479566063dSJacob Faibussowitsch PetscCall(DMGetApplicationContext(plex[0], &ctx)); 44828b400f6SJacob Faibussowitsch PetscCheck(ctx, PETSC_COMM_SELF, PETSC_ERR_PLIB, "no context"); 4499566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex[0], &dim)); 45063a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 451a587d139SMark if (ctx->gpu_assembly) { 4529566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)JacP, "assembly_maps", (PetscObject *)&container)); 453bfc784b7SMark Adams if (container) { 454a587d139SMark P4estVertexMaps *h_maps = NULL; 4559566063dSJacob Faibussowitsch PetscCall(PetscContainerGetPointer(container, (void **)&h_maps)); 4568a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 4578a6f2e61SMark Adams if (h_maps[grid].d_self) { 4588a6f2e61SMark Adams maps[grid] = h_maps[grid].d_self; 4598a6f2e61SMark Adams nfaces = h_maps[grid].num_face; // nface=0 for CPU assembly 460a587d139SMark } else { 461a587d139SMark SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 462a587d139SMark } 4638a6f2e61SMark Adams } 464bfc784b7SMark Adams if (!d_coo_vals) { 465a587d139SMark // this does the setup the first time called 4669566063dSJacob Faibussowitsch PetscCall(MatKokkosGetDeviceMatWrite(JacP, &d_mat)); 467bfc784b7SMark Adams } else { 4688fdabdddSMark Adams d_mat = NULL; 469a587d139SMark } 470bfc784b7SMark Adams } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 471a587d139SMark } else { 4728a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) maps[grid] = NULL; 4738a6f2e61SMark Adams nfaces = 0; 4748fdabdddSMark Adams d_mat = NULL; 4758fdabdddSMark Adams container = NULL; 476a587d139SMark } 4778fdabdddSMark Adams num_cells_batch = Nf_max = num_cells_max = 0; 4788a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 4798a6f2e61SMark Adams int Nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 4808a6f2e61SMark Adams if (Nfloc > Nf_max) Nf_max = Nfloc; 4818a6f2e61SMark Adams if (a_numCells[grid] > num_cells_max) num_cells_max = a_numCells[grid]; 4828fdabdddSMark Adams num_cells_batch += a_numCells[grid]; // we don't have a host element offset here (but in ctx) 4838a6f2e61SMark Adams } 484d9008a5dSMark Adams const int elem_mat_num_cells_max_grid = container ? 0 : num_cells_max; 485bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 486bfbbad94Smarkadams4 const int totDim_max = Nf_max * Nq, elem_mat_size_max = totDim_max * totDim_max; 487a31f6053SMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight> d_elem_mats("element matrices", batch_sz, num_grids, elem_mat_num_cells_max_grid, elem_mat_size_max); // not used (cpu assembly) 488bfbbad94Smarkadams4 #endif 4898a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_Eq_m_k(a_Eq_m, Nftot); 4908a6f2e61SMark Adams if (a_elem_closure || a_xarray) { 491e8d2b73aSMark Adams Kokkos::deep_copy(*d_Eq_m_k, h_Eq_m_k); 492e8d2b73aSMark Adams d_Eq_m = d_Eq_m_k->data(); 4938a6f2e61SMark Adams } else d_Eq_m = NULL; 4949566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 4959566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[3], 0, 0, 0, 0)); 4968a6f2e61SMark Adams if (a_elem_closure || a_xarray) { // Jacobian, create f & df 4978a6f2e61SMark Adams Kokkos::View<PetscScalar *, Kokkos::LayoutLeft> *d_vertex_f_k = NULL; 4989566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[1], 0, 0, 0, 0)); 4998a6f2e61SMark Adams if (a_elem_closure) { 5008a6f2e61SMark Adams PetscInt closure_sz = 0; // argh, don't have this on the host!!! 5018a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 5028a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 5038a6f2e61SMark Adams closure_sz += Nq * nfloc * a_numCells[grid]; 5048a6f2e61SMark Adams } 5058fdabdddSMark Adams closure_sz *= batch_sz; 5068a6f2e61SMark Adams d_vertex_f_k = new Kokkos::View<PetscScalar *, Kokkos::LayoutLeft>("closure", closure_sz); 5078a6f2e61SMark Adams const Kokkos::View<PetscScalar *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_closure_k(a_elem_closure, closure_sz); // Vertex data for each element 5088a6f2e61SMark Adams Kokkos::deep_copy(*d_vertex_f_k, h_closure_k); 5098a6f2e61SMark Adams d_vertex_f = d_vertex_f_k->data(); 510af0767daSMark Adams } else { 5118a6f2e61SMark Adams d_vertex_f = (PetscScalar *)a_xarray; 512af0767daSMark Adams } 5139566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[1], 0, 0, 0, 0)); 5149566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[8], 0, 0, 0, 0)); 5159566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 51619be780dSMark Adams 51719be780dSMark Adams const int scr_bytes_fdf = real2_scr_t::shmem_size(Nf_max, Nb); 518dbabbaf5SMark Adams PetscCall(PetscInfo(plex[0], "df & f shared memory size: %d bytes in level, %d num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", scr_bytes_fdf, KOKKOS_SHARED_LEVEL, num_cells_batch * batch_sz, team_size, vector_size, nfaces, Nf_max)); 5199371c9d4SSatish Balay Kokkos::parallel_for( 5209371c9d4SSatish Balay "f, df", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, /* Kokkos::AUTO */ vector_size).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerTeam(scr_bytes_fdf)), KOKKOS_LAMBDA(const team_member team) { 5218fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem, IPf_sz_glb = d_ipf_offset[num_grids]; 5228a6f2e61SMark Adams // find my grid 5238fdabdddSMark Adams PetscInt grid = 0; 5248fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 5258a6f2e61SMark Adams { 5268fdabdddSMark Adams const PetscInt loc_nip = d_numCells[grid] * Nq, loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 5278fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 52819be780dSMark Adams { 52919be780dSMark Adams real2_scr_t s_coef_k(team.team_scratch(KOKKOS_SHARED_LEVEL), Nf_max, Nb); 53019be780dSMark Adams PetscScalar *coef; 5318fdabdddSMark Adams const PetscReal *invJe = &d_invJ_k((d_ip_offset[grid] + loc_elem * Nq) * dim * dim); 532a587d139SMark // un pack IPData 5338a6f2e61SMark Adams if (!maps[grid]) { 5348fdabdddSMark Adams coef = &d_vertex_f[b_id * IPf_sz_glb + d_ipf_offset[grid] + loc_elem * Nb * loc_Nf]; // closure and IP indexing are the same 535af0767daSMark Adams } else { 53619be780dSMark Adams coef = s_coef_k.data(); 53719be780dSMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, (int)loc_Nf), [=](int f) { 53819be780dSMark Adams //for (int f = 0; f < loc_Nf; ++f) { 53919be780dSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)Nb), [=](int b) { 54019be780dSMark Adams //for (int b = 0; b < Nb; ++b) { 54119be780dSMark Adams LandauIdx idx = maps[grid]->gIdx[loc_elem][f][b]; 542af0767daSMark Adams if (idx >= 0) { 54319be780dSMark Adams coef[f * Nb + b] = d_vertex_f[idx + moffset]; // xarray data, not IP, need raw array to deal with CPU assemble case (not used) 544af0767daSMark Adams } else { 545af0767daSMark Adams idx = -idx - 1; 54619be780dSMark Adams coef[f * Nb + b] = 0; 5478a6f2e61SMark Adams for (int q = 0; q < maps[grid]->num_face; q++) { 5488a6f2e61SMark Adams PetscInt id = maps[grid]->c_maps[idx][q].gid; 5498a6f2e61SMark Adams PetscScalar scale = maps[grid]->c_maps[idx][q].scale; 550f26f10aaSMark Adams if (id >= 0) coef[f * Nb + b] += scale * d_vertex_f[id + moffset]; 551af0767daSMark Adams } 552af0767daSMark Adams } 55319be780dSMark Adams }); 55419be780dSMark Adams }); 555af0767daSMark Adams } 55619be780dSMark Adams team.team_barrier(); 557a587d139SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 5588fdabdddSMark Adams const PetscReal *const invJ = &invJe[myQi * dim * dim]; // b_elem_idx: batch element index 559a587d139SMark const PetscReal *Bq = &d_BB[myQi * Nb], *Dq = &d_DD[myQi * Nb * dim]; 5608fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)loc_Nf), [=](int f) { 561a587d139SMark PetscInt b, e, d; 562e8d2b73aSMark Adams PetscReal refSpaceDer[LANDAU_DIM]; 5638fdabdddSMark Adams const PetscInt idx = d_ipf_offset[grid] + f * loc_nip + loc_elem * Nq + myQi; 5648fdabdddSMark Adams d_fdf_k(b_id, 0, idx) = 0.0; 565a587d139SMark for (d = 0; d < LANDAU_DIM; ++d) refSpaceDer[d] = 0.0; 566a587d139SMark for (b = 0; b < Nb; ++b) { 56719be780dSMark Adams d_fdf_k(b_id, 0, idx) += Bq[b] * PetscRealPart(coef[f * Nb + b]); 56819be780dSMark Adams for (d = 0; d < dim; ++d) refSpaceDer[d] += Dq[b * dim + d] * PetscRealPart(coef[f * Nb + b]); 569a587d139SMark } 570a587d139SMark for (d = 0; d < dim; ++d) { 571ad540459SPierre Jolivet for (e = 0, d_fdf_k(b_id, d + 1, idx) = 0.0; e < dim; ++e) d_fdf_k(b_id, d + 1, idx) += invJ[e * dim + d] * refSpaceDer[e]; 572a587d139SMark } 5738a6f2e61SMark Adams }); // f 5748a6f2e61SMark Adams }); // myQi 5758a6f2e61SMark Adams } 57619be780dSMark Adams team.team_barrier(); 57719be780dSMark Adams } // 'grid' scope 5788a6f2e61SMark Adams }); // global elems - fdf 5798a6f2e61SMark Adams Kokkos::fence(); 580bfbbad94Smarkadams4 PetscCall(PetscLogGpuTimeEnd()); 5819566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[8], 0, 0, 0, 0)); 582e6118d12SMark Adams // Jacobian 583d9008a5dSMark Adams int maximum_shared_mem_size = 64000; 584*a16fd2c9SJacob Faibussowitsch 585*a16fd2c9SJacob Faibussowitsch if (PetscDeviceConfiguredFor_Internal(PETSC_DEVICE_DEFAULT)) { 586*a16fd2c9SJacob Faibussowitsch // FIXME: remove the configuredfor check once the PETSC_DEVICE_HOST MR is merged in 587*a16fd2c9SJacob Faibussowitsch PetscDevice device; 588*a16fd2c9SJacob Faibussowitsch 589*a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetDefault_Internal(&device)); 590*a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetAttribute(device, PETSC_DEVICE_ATTR_SIZE_T_SHARED_MEM_PER_BLOCK, &maximum_shared_mem_size)); 591*a16fd2c9SJacob Faibussowitsch } 592d9008a5dSMark Adams const int jac_scr_bytes = 2 * (g2_scr_t::shmem_size(dim, Nf_max, Nq) + g3_scr_t::shmem_size(dim, dim, Nf_max, Nq)); 593d9008a5dSMark Adams const int jac_shared_level = (jac_scr_bytes > maximum_shared_mem_size) ? 1 : KOKKOS_SHARED_LEVEL; 59481451871SMark Adams auto jac_lambda = KOKKOS_LAMBDA(const team_member team) { 5958fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 5968a6f2e61SMark Adams // find my grid 5978fdabdddSMark Adams PetscInt grid = 0; 5988fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 5998a6f2e61SMark Adams { 60019be780dSMark Adams const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 6018fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 602bfbbad94Smarkadams4 const PetscInt f_off = d_species_offset[grid]; 603bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 604bfbbad94Smarkadams4 const PetscInt totDim = loc_Nf * Nq; 605bfbbad94Smarkadams4 #endif 606d9008a5dSMark Adams g2_scr_t g2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 607d9008a5dSMark Adams g3_scr_t g3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 608d9008a5dSMark Adams g2_scr_t gg2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 609d9008a5dSMark Adams g3_scr_t gg3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 610e0eea495SMark // get g2[] & g3[] 611e0eea495SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 612e0eea495SMark using Kokkos::parallel_reduce; 6138fdabdddSMark Adams const PetscInt jpidx_glb = d_ip_offset[grid] + loc_elem * Nq + myQi; 6148fdabdddSMark Adams const PetscReal *invJ = &d_invJ_k(jpidx_glb * dim * dim); 6158fdabdddSMark Adams const PetscReal vj[3] = {d_x[jpidx_glb], d_y[jpidx_glb], d_z ? d_z[jpidx_glb] : 0}, wj = d_w[jpidx_glb]; 6168a6f2e61SMark Adams landau_inner_red::TensorValueType gg_temp; // reduce on part of gg2 and g33 for IP jpidx_g 6179371c9d4SSatish Balay Kokkos::parallel_reduce( 6189371c9d4SSatish Balay Kokkos::ThreadVectorRange(team, (int)d_ip_offset[num_grids]), 6199371c9d4SSatish Balay [=](const int &ipidx, landau_inner_red::TensorValueType &ggg) { 620e8d2b73aSMark Adams const PetscReal wi = d_w[ipidx], x = d_x[ipidx], y = d_y[ipidx]; 62152cdd6eaSMark PetscReal temp1[3] = {0, 0, 0}, temp2 = 0; 6228fdabdddSMark Adams PetscInt fieldA, d2, d3, f_off_r, grid_r, ipidx_g, nip_loc_r, loc_Nf_r; 623e0eea495SMark #if LANDAU_DIM == 2 6248a6f2e61SMark Adams PetscReal Ud[2][2], Uk[2][2], mask = (PetscAbs(vj[0] - x) < 100 * PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1] - y) < 100 * PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6258a6f2e61SMark Adams LandauTensor2D(vj, x, y, Ud, Uk, mask); 62652cdd6eaSMark #else 6277620afa1SMark Adams PetscReal U[3][3], z = d_z[ipidx], mask = (PetscAbs(vj[0]-x) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1]-y) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[2]-z) < 100*PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6288a6f2e61SMark Adams LandauTensor3D(vj, x, y, z, U, mask); 62952cdd6eaSMark #endif 6308a6f2e61SMark Adams grid_r = 0; 6318a6f2e61SMark Adams while (ipidx >= d_ip_offset[grid_r + 1]) grid_r++; // yuck search for grid 6328a6f2e61SMark Adams f_off_r = d_species_offset[grid_r]; 6338a6f2e61SMark Adams ipidx_g = ipidx - d_ip_offset[grid_r]; 6348a6f2e61SMark Adams nip_loc_r = d_numCells[grid_r] * Nq; 6358fdabdddSMark Adams loc_Nf_r = d_species_offset[grid_r + 1] - d_species_offset[grid_r]; 6368fdabdddSMark Adams for (fieldA = 0; fieldA < loc_Nf_r; ++fieldA) { 6378fdabdddSMark Adams const PetscInt idx = d_ipf_offset[grid_r] + fieldA * nip_loc_r + ipidx_g; 6388fdabdddSMark Adams temp1[0] += d_fdf_k(b_id, 1, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 6398fdabdddSMark Adams temp1[1] += d_fdf_k(b_id, 2, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 64052cdd6eaSMark #if LANDAU_DIM == 3 6418fdabdddSMark Adams temp1[2] += d_fdf_k(b_id, 3, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 64252cdd6eaSMark #endif 6438fdabdddSMark Adams temp2 += d_fdf_k(b_id, 0, idx) * d_beta[fieldA + f_off_r]; 64452cdd6eaSMark } 64552cdd6eaSMark temp1[0] *= wi; 64652cdd6eaSMark temp1[1] *= wi; 64752cdd6eaSMark #if LANDAU_DIM == 3 64852cdd6eaSMark temp1[2] *= wi; 64952cdd6eaSMark #endif 65052cdd6eaSMark temp2 *= wi; 65152cdd6eaSMark #if LANDAU_DIM == 2 65252cdd6eaSMark for (d2 = 0; d2 < 2; d2++) { 653e0eea495SMark for (d3 = 0; d3 < 2; ++d3) { 654e0eea495SMark /* K = U * grad(f): g2=e: i,A */ 65552cdd6eaSMark ggg.gg2[d2] += Uk[d2][d3] * temp1[d3]; 656e0eea495SMark /* D = -U * (I \kron (fx)): g3=f: i,j,A */ 65752cdd6eaSMark ggg.gg3[d2][d3] += Ud[d2][d3] * temp2; 658e0eea495SMark } 659e0eea495SMark } 660e0eea495SMark #else 661e0eea495SMark for (d2 = 0; d2 < 3; ++d2) { 662e0eea495SMark for (d3 = 0; d3 < 3; ++d3) { 663e0eea495SMark /* K = U * grad(f): g2 = e: i,A */ 66452cdd6eaSMark ggg.gg2[d2] += U[d2][d3]*temp1[d3]; 665e0eea495SMark /* D = -U * (I \kron (fx)): g3 = f: i,j,A */ 66652cdd6eaSMark ggg.gg3[d2][d3] += U[d2][d3]*temp2; 667e0eea495SMark } 668e0eea495SMark } 669e0eea495SMark #endif 6709371c9d4SSatish Balay }, 6719371c9d4SSatish Balay Kokkos::Sum<landau_inner_red::TensorValueType>(gg_temp)); 67252cdd6eaSMark // add alpha and put in gg2/3 6738fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { 67452cdd6eaSMark PetscInt d2, d3; 67552cdd6eaSMark for (d2 = 0; d2 < dim; d2++) { 6768a6f2e61SMark Adams gg2(d2, fieldA, myQi) = gg_temp.gg2[d2] * d_alpha[fieldA + f_off]; 677ad540459SPierre Jolivet for (d3 = 0; d3 < dim; d3++) gg3(d2, d3, fieldA, myQi) = -gg_temp.gg3[d2][d3] * d_alpha[fieldA + f_off] * d_invMass[fieldA + f_off]; 67852cdd6eaSMark } 679e0eea495SMark }); 68052cdd6eaSMark /* add electric field term once per IP */ 6819371c9d4SSatish Balay Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { gg2(dim - 1, fieldA, myQi) += d_Eq_m[fieldA + f_off]; }); 6828fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [=](const int &fieldA) { 683e0eea495SMark int d, d2, d3, dp; 684e0eea495SMark /* Jacobian transform - g2, g3 - per thread (2D) */ 685e0eea495SMark for (d = 0; d < dim; ++d) { 68652cdd6eaSMark g2(d, fieldA, myQi) = 0; 687e0eea495SMark for (d2 = 0; d2 < dim; ++d2) { 6888fdabdddSMark Adams g2(d, fieldA, myQi) += invJ[d * dim + d2] * gg2(d2, fieldA, myQi); 68952cdd6eaSMark g3(d, d2, fieldA, myQi) = 0; 690e0eea495SMark for (d3 = 0; d3 < dim; ++d3) { 691ad540459SPierre Jolivet for (dp = 0; dp < dim; ++dp) g3(d, d2, fieldA, myQi) += invJ[d * dim + d3] * gg3(d3, dp, fieldA, myQi) * invJ[d2 * dim + dp]; 692e0eea495SMark } 69352cdd6eaSMark g3(d, d2, fieldA, myQi) *= wj; 694e0eea495SMark } 69552cdd6eaSMark g2(d, fieldA, myQi) *= wj; 696e0eea495SMark } 697e0eea495SMark }); 69852cdd6eaSMark }); // Nq 699e0eea495SMark team.team_barrier(); 7001eec90e4SMark Adams { /* assemble */ 7018fdabdddSMark Adams for (PetscInt fieldA = 0; fieldA < loc_Nf; fieldA++) { 702930e68a5SMark Adams /* assemble */ 7031eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 7041eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 7051eec90e4SMark Adams PetscScalar t = 0; 7061eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 707e0eea495SMark const PetscReal *BJq = &d_BB[qj * Nb], *DIq = &d_DD[qj * Nb * dim]; 7081eec90e4SMark Adams for (int d = 0; d < dim; ++d) { 7091eec90e4SMark Adams t += DIq[f * dim + d] * g2(d, fieldA, qj) * BJq[g]; 710ad540459SPierre Jolivet for (int d2 = 0; d2 < dim; ++d2) t += DIq[f * dim + d] * g3(d, d2, fieldA, qj) * DIq[g * dim + d2]; 711e0eea495SMark } 712930e68a5SMark Adams } 7138a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { // CPU assembly 714bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7151eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 7168fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 717bfbbad94Smarkadams4 #endif 71819be780dSMark Adams } else { 719cada7fc7SMark Adams landau_mat_assemble(d_mat, d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch); 72019be780dSMark Adams } 7211eec90e4SMark Adams }); 7221eec90e4SMark Adams }); 7231eec90e4SMark Adams } 724a587d139SMark } 72519be780dSMark Adams } // scope with 'grid' 72681451871SMark Adams }; 7279566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[4], 0, 0, 0, 0)); 7289566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 729d9008a5dSMark Adams PetscCall(PetscInfo(plex[0], "Jacobian shared memory size: %d bytes in level %s (max shared=%d), num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", jac_scr_bytes, jac_shared_level == 0 ? "local" : "global", maximum_shared_mem_size, num_cells_batch * batch_sz, team_size, vector_size, nfaces, Nf_max)); 730d9008a5dSMark Adams Kokkos::parallel_for("Jacobian", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size).set_scratch_size(jac_shared_level, Kokkos::PerTeam(jac_scr_bytes)), jac_lambda); // Kokkos::LaunchBounds<512,2> 731d9008a5dSMark Adams Kokkos::fence(); 7329566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7339566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[4], 0, 0, 0, 0)); 73419be780dSMark Adams if (d_vertex_f_k) delete d_vertex_f_k; 735dbabbaf5SMark Adams } else { // mass 7369566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[16], 0, 0, 0, 0)); 7379566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 738dbabbaf5SMark Adams PetscCall(PetscInfo(plex[0], "Mass team size=%d vector size=%d #face=%d Nb=%" PetscInt_FMT ", %s assembly\n", team_size, vector_size, nfaces, Nb, d_coo_vals ? "COO" : "CSR")); 7399371c9d4SSatish Balay Kokkos::parallel_for( 7409371c9d4SSatish Balay "Mass", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size), KOKKOS_LAMBDA(const team_member team) { // Kokkos::LaunchBounds<512,4> 7418fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 7428a6f2e61SMark Adams // find my grid 7438fdabdddSMark Adams PetscInt grid = 0; 7448fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 7458a6f2e61SMark Adams { 746bfbbad94Smarkadams4 const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid], jpidx_0 = d_ip_offset[grid] + loc_elem * Nq; 747bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 748bfbbad94Smarkadams4 const PetscInt totDim = loc_Nf * Nq; 749bfbbad94Smarkadams4 #endif 7508fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 7518fdabdddSMark Adams for (int fieldA = 0; fieldA < loc_Nf; fieldA++) { 7521eec90e4SMark Adams /* assemble */ 7531eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 7541eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 7551eec90e4SMark Adams PetscScalar t = 0; 7561eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 7571eec90e4SMark Adams const PetscReal *BJq = &d_BB[qj * Nb]; 7588fdabdddSMark Adams const PetscInt jpidx_glb = jpidx_0 + qj; 7598a6f2e61SMark Adams if (dim == 2) { 7608fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g] * 2. * PETSC_PI; 7618a6f2e61SMark Adams } else { 7628fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g]; 7631eec90e4SMark Adams } 7648a6f2e61SMark Adams } 7658a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { 766bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7671eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 7688fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 769bfbbad94Smarkadams4 #endif 770ad4b5651SMark Adams } else { 771cada7fc7SMark Adams landau_mat_assemble(d_mat, d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch); 772ad4b5651SMark Adams } 773e0eea495SMark }); 774e0eea495SMark }); 77513241b68SMark Adams } // field 77613241b68SMark Adams } // grid 7771eec90e4SMark Adams }); 778d9008a5dSMark Adams Kokkos::fence(); 7799566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7809566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[16], 0, 0, 0, 0)); 7811eec90e4SMark Adams } 782bfc784b7SMark Adams if (d_coo_vals) { 7839566063dSJacob Faibussowitsch PetscCall(MatSetValuesCOO(JacP, d_coo_vals, ADD_VALUES)); 784bfbbad94Smarkadams4 #ifndef LAND_SUPPORT_CPU_ASS 785bfbbad94Smarkadams4 Kokkos::fence(); // for timers 786bfbbad94Smarkadams4 #endif 787bfc784b7SMark Adams } else if (elem_mat_num_cells_max_grid) { // CPU assembly 788bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7898fdabdddSMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight>::HostMirror h_elem_mats = Kokkos::create_mirror_view(d_elem_mats); 790e0eea495SMark Kokkos::deep_copy(h_elem_mats, d_elem_mats); 791d618d24fSMark Adams PetscCheck(!container, PETSC_COMM_SELF, PETSC_ERR_PLIB, "?????"); 7928fdabdddSMark Adams for (PetscInt b_id = 0; b_id < batch_sz; b_id++) { // OpenMP (once) 7938a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 7948a6f2e61SMark Adams PetscSection section, globalSection; 7958a6f2e61SMark Adams PetscInt cStart, cEnd; 7968fdabdddSMark Adams Mat B = subJ[LAND_PACK_IDX(b_id, grid)]; 7978fdabdddSMark Adams PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, a_mat_offset), nloc, nzl, colbuf[1024], row; 7988fdabdddSMark Adams const PetscInt *cols; 7998fdabdddSMark Adams const PetscScalar *vals; 8009566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[5], 0, 0, 0, 0)); 8019566063dSJacob Faibussowitsch PetscCall(DMPlexGetHeightStratum(plex[grid], 0, &cStart, &cEnd)); 8029566063dSJacob Faibussowitsch PetscCall(DMGetLocalSection(plex[grid], §ion)); 8039566063dSJacob Faibussowitsch PetscCall(DMGetGlobalSection(plex[grid], &globalSection)); 8049566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[5], 0, 0, 0, 0)); 8059566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[6], 0, 0, 0, 0)); 8068a6f2e61SMark Adams for (PetscInt ej = cStart; ej < cEnd; ++ej) { 8078fdabdddSMark Adams const PetscScalar *elMat = &h_elem_mats(b_id, grid, ej - cStart, 0); 8089566063dSJacob Faibussowitsch PetscCall(DMPlexMatSetClosure(plex[grid], section, globalSection, B, ej, elMat, ADD_VALUES)); 8098a6f2e61SMark Adams if (grid == 0 && ej == -1) { 8108fdabdddSMark Adams const PetscInt loc_Nf = a_species_offset[grid + 1] - a_species_offset[grid], totDim = loc_Nf * Nq; 811e0eea495SMark int d, f; 8128a6f2e61SMark Adams PetscPrintf(PETSC_COMM_SELF, "Kokkos Element matrix %d/%d\n", 1, (int)a_numCells[grid]); 813e0eea495SMark for (d = 0; d < totDim; ++d) { 81452cdd6eaSMark for (f = 0; f < totDim; ++f) PetscPrintf(PETSC_COMM_SELF, " %12.5e", PetscRealPart(elMat[d * totDim + f])); 81552cdd6eaSMark PetscPrintf(PETSC_COMM_SELF, "\n"); 816e0eea495SMark } 817e8d2b73aSMark Adams exit(14); 818e0eea495SMark } 819e0eea495SMark } 8208fdabdddSMark Adams // move nest matrix to global JacP 8219566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 8229566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 8239566063dSJacob Faibussowitsch PetscCall(MatGetSize(B, &nloc, NULL)); 8248a6f2e61SMark Adams for (int i = 0; i < nloc; i++) { 8259566063dSJacob Faibussowitsch PetscCall(MatGetRow(B, i, &nzl, &cols, &vals)); 82663a3b9bcSJacob Faibussowitsch PetscCheck(nzl <= 1024, PetscObjectComm((PetscObject)B), PETSC_ERR_PLIB, "Row too big: %" PetscInt_FMT, nzl); 8278a6f2e61SMark Adams for (int j = 0; j < nzl; j++) colbuf[j] = cols[j] + moffset; 8288a6f2e61SMark Adams row = i + moffset; 8299566063dSJacob Faibussowitsch PetscCall(MatSetValues(JacP, 1, &row, nzl, colbuf, vals, ADD_VALUES)); 8309566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(B, i, &nzl, &cols, &vals)); 8318a6f2e61SMark Adams } 8329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&subJ[LAND_PACK_IDX(b_id, grid)])); 8339566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[6], 0, 0, 0, 0)); 8348a6f2e61SMark Adams } // grids 835a587d139SMark } 836bfbbad94Smarkadams4 #else 837bfbbad94Smarkadams4 SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "CPU assembly not supported"); 838bfbbad94Smarkadams4 #endif 8398fdabdddSMark Adams } 840e0eea495SMark PetscFunctionReturn(0); 841e0eea495SMark } 842e0eea495SMark } // extern "C" 843