1e0eea495SMark /* 2e0eea495SMark Implements the Kokkos kernel 3e0eea495SMark */ 4e0eea495SMark #define PETSC_SKIP_CXX_COMPLEX_FIX 5e0eea495SMark #include <petscconf.h> 6e0eea495SMark #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 7e0eea495SMark #include <petsclandau.h> 8e0eea495SMark #include <petscts.h> 9a587d139SMark #include <petscveckokkos.hpp> 10a587d139SMark 11e0eea495SMark #include <Kokkos_Core.hpp> 12e0eea495SMark #include <cstdio> 13e0eea495SMark typedef Kokkos::TeamPolicy<>::member_type team_member; 14e0eea495SMark #define PETSC_DEVICE_FUNC_DECL KOKKOS_INLINE_FUNCTION 15e0eea495SMark #include "../land_tensors.h" 16a587d139SMark #define atomicAdd(e, f) Kokkos::atomic_fetch_add(e, f) 17a587d139SMark #include <petscaijdevice.h> 18a587d139SMark #undef atomicAdd 19e0eea495SMark 20e0eea495SMark namespace landau_inner_red { // namespace helps with name resolution in reduction identity 2152cdd6eaSMark template< class ScalarType > 22e0eea495SMark struct array_type { 2352cdd6eaSMark ScalarType gg2[LANDAU_DIM]; 2452cdd6eaSMark ScalarType gg3[LANDAU_DIM][LANDAU_DIM]; 25e0eea495SMark 26e0eea495SMark KOKKOS_INLINE_FUNCTION // Default constructor - Initialize to 0's 27e0eea495SMark array_type() { 28e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++){ 2952cdd6eaSMark gg2[j] = 0; 30e0eea495SMark for (int k = 0; k < LANDAU_DIM; k++){ 3152cdd6eaSMark gg3[j][k] = 0; 32e0eea495SMark } 33e0eea495SMark } 34e0eea495SMark } 35e0eea495SMark KOKKOS_INLINE_FUNCTION // Copy Constructor 36e0eea495SMark array_type(const array_type & rhs) { 37e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++){ 3852cdd6eaSMark gg2[j] = rhs.gg2[j]; 39e0eea495SMark for (int k = 0; k < LANDAU_DIM; k++){ 4052cdd6eaSMark gg3[j][k] = rhs.gg3[j][k]; 41e0eea495SMark } 42e0eea495SMark } 43e0eea495SMark } 44e0eea495SMark KOKKOS_INLINE_FUNCTION // add operator 45e0eea495SMark array_type& operator += (const array_type& src) { 46e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++){ 4752cdd6eaSMark gg2[j] += src.gg2[j]; 48e0eea495SMark for (int k = 0; k < LANDAU_DIM; k++){ 4952cdd6eaSMark gg3[j][k] += src.gg3[j][k]; 50e0eea495SMark } 51e0eea495SMark } 52e0eea495SMark return *this; 53e0eea495SMark } 54e0eea495SMark KOKKOS_INLINE_FUNCTION // volatile add operator 55e0eea495SMark void operator += (const volatile array_type& src) volatile { 56e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++){ 5752cdd6eaSMark gg2[j] += src.gg2[j]; 58e0eea495SMark for (int k = 0; k < LANDAU_DIM; k++){ 5952cdd6eaSMark gg3[j][k] += src.gg3[j][k]; 60e0eea495SMark } 61e0eea495SMark } 62e0eea495SMark } 63e0eea495SMark }; 6452cdd6eaSMark typedef array_type<PetscReal> TensorValueType; // used to simplify code below 65e0eea495SMark } 66e0eea495SMark 67e0eea495SMark namespace Kokkos { //reduction identity must be defined in Kokkos namespace 68e0eea495SMark template<> 6952cdd6eaSMark struct reduction_identity< landau_inner_red::TensorValueType > { 7052cdd6eaSMark KOKKOS_FORCEINLINE_FUNCTION static landau_inner_red::TensorValueType sum() { 7152cdd6eaSMark return landau_inner_red::TensorValueType(); 72e0eea495SMark } 73e0eea495SMark }; 74e0eea495SMark } 75e0eea495SMark 76e0eea495SMark extern "C" { 77a587d139SMark PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps *maps, pointInterpolationP4est (*pointMaps)[LANDAU_MAX_Q_FACE], PetscInt Nf, PetscInt Nq) 78a587d139SMark { 79a587d139SMark P4estVertexMaps h_maps; /* host container */ 80a587d139SMark const Kokkos::View<pointInterpolationP4est*[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_points ((pointInterpolationP4est*)pointMaps, maps->num_reduced); 81a587d139SMark const Kokkos::View< LandauIdx*[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_gidx ((LandauIdx*)maps->gIdx, maps->num_elements); 82a587d139SMark Kokkos::View<pointInterpolationP4est*[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *d_points = new Kokkos::View<pointInterpolationP4est*[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight>("points", maps->num_reduced); 83a587d139SMark Kokkos::View<LandauIdx*[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight> *d_gidx = new Kokkos::View<LandauIdx*[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight>("gIdx", maps->num_elements); 84a587d139SMark 85a587d139SMark PetscFunctionBegin; 86a587d139SMark Kokkos::deep_copy (*d_gidx, h_gidx); 87a587d139SMark Kokkos::deep_copy (*d_points, h_points); 88a587d139SMark h_maps.num_elements = maps->num_elements; 89a587d139SMark h_maps.num_face = maps->num_face; 90a587d139SMark h_maps.num_reduced = maps->num_reduced; 91a587d139SMark h_maps.deviceType = maps->deviceType; 92a587d139SMark h_maps.Nf = Nf; 93a587d139SMark h_maps.Nq = Nq; 94a587d139SMark h_maps.c_maps = (pointInterpolationP4est (*)[LANDAU_MAX_Q_FACE]) d_points->data(); 95a587d139SMark maps->vp1 = (void*)d_points; 96a587d139SMark h_maps.gIdx = (LandauIdx (*)[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ]) d_gidx->data(); 97a587d139SMark maps->vp2 = (void*)d_gidx; 98a587d139SMark { 99a587d139SMark Kokkos::View<P4estVertexMaps, Kokkos::HostSpace> h_maps_k(&h_maps); 100a587d139SMark Kokkos::View<P4estVertexMaps> *d_maps_k = new Kokkos::View<P4estVertexMaps>(Kokkos::create_mirror(DeviceMemorySpace(),h_maps_k)); 101a587d139SMark Kokkos::deep_copy (*d_maps_k, h_maps_k); 102a587d139SMark maps->data = d_maps_k->data(); 103a587d139SMark maps->vp3 = (void*)d_maps_k; 104a587d139SMark } 105a587d139SMark PetscFunctionReturn(0); 106a587d139SMark } 107a587d139SMark PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps *maps) 108a587d139SMark { 109a587d139SMark Kokkos::View<pointInterpolationP4est*[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *a = (Kokkos::View<pointInterpolationP4est*[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight>*)maps->vp1; 110a587d139SMark Kokkos::View<LandauIdx*[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight>*b = (Kokkos::View<LandauIdx*[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight>*)maps->vp2; 111a587d139SMark Kokkos::View<P4estVertexMaps*> *c = (Kokkos::View<P4estVertexMaps*>*)maps->vp3; 112a587d139SMark delete a; delete b; delete c; 113a587d139SMark PetscFunctionReturn(0); 114a587d139SMark } 115a587d139SMark 116*e8d2b73aSMark Adams PetscErrorCode LandauKokkosStaticDataSet(DM plex, const PetscInt Nq, PetscReal nu_alpha[], PetscReal nu_beta[], PetscReal a_invMass[], PetscReal a_invJ[], PetscReal a_mass_w[], 117*e8d2b73aSMark Adams PetscReal a_x[], PetscReal a_y[], PetscReal a_z[], PetscReal a_w[], LandauGeomData *SData_d) 118e0eea495SMark { 119e0eea495SMark PetscReal *BB,*DD; 120*e8d2b73aSMark Adams PetscErrorCode ierr; 121*e8d2b73aSMark Adams PetscTabulation *Tf; 122e0eea495SMark LandauCtx *ctx; 123*e8d2b73aSMark Adams PetscInt *Nbf,dim,Nf,Nb,nip,cStart,cEnd; 124*e8d2b73aSMark Adams PetscDS prob; 125e0eea495SMark 126e0eea495SMark PetscFunctionBegin; 127e0eea495SMark ierr = DMGetApplicationContext(plex, &ctx);CHKERRQ(ierr); 128e0eea495SMark if (!ctx) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "no context"); 129e0eea495SMark ierr = DMGetDimension(plex, &dim);CHKERRQ(ierr); 130e0eea495SMark ierr = DMPlexGetHeightStratum(plex,0,&cStart,&cEnd);CHKERRQ(ierr); 131*e8d2b73aSMark Adams nip = (cEnd - cStart)*Nq; 132e0eea495SMark ierr = DMGetDS(plex, &prob);CHKERRQ(ierr); 133e0eea495SMark ierr = PetscDSGetNumFields(prob, &Nf);CHKERRQ(ierr); 134e0eea495SMark ierr = PetscDSGetDimensions(prob, &Nbf);CHKERRQ(ierr); Nb = Nbf[0]; 135e0eea495SMark if (Nq != Nb) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Nq != Nb. %D %D",Nq,Nb); 13652cdd6eaSMark if (LANDAU_DIM != dim) SETERRQ2(PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %D != LANDAU_DIM %d",dim,LANDAU_DIM); 137e0eea495SMark ierr = PetscDSGetTabulation(prob, &Tf);CHKERRQ(ierr); 138*e8d2b73aSMark Adams BB = Tf[0]->T[0]; DD = Tf[0]->T[1]; 139*e8d2b73aSMark Adams ierr = PetscKokkosInitializeCheck();CHKERRQ(ierr); 140*e8d2b73aSMark Adams { 141*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_alpha (nu_alpha, Nf); 142*e8d2b73aSMark Adams auto alpha = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("alpha", Nf); 143*e8d2b73aSMark Adams SData_d->alpha = static_cast<void*>(alpha); 144*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_beta (nu_beta, Nf); 145*e8d2b73aSMark Adams auto beta = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("beta", Nf); 146*e8d2b73aSMark Adams SData_d->beta = static_cast<void*>(beta); 147*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_invMass (a_invMass,Nf); 148*e8d2b73aSMark Adams auto invMass = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("invMass", Nf); 149*e8d2b73aSMark Adams SData_d->invMass = static_cast<void*>(invMass); 150*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_BB (BB,Nq*Nb); 151*e8d2b73aSMark Adams auto B = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("B", Nq*Nb); 152*e8d2b73aSMark Adams SData_d->B = static_cast<void*>(B); 153*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_DD (DD,Nq*Nb*dim); 154*e8d2b73aSMark Adams auto D = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("D", Nq*Nb*dim); 155*e8d2b73aSMark Adams SData_d->D = static_cast<void*>(D); 156*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_mass_w (a_mass_w, nip); 157*e8d2b73aSMark Adams auto mass_w = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("mass_w", nip); 158*e8d2b73aSMark Adams SData_d->mass_w = static_cast<void*>(mass_w); 159*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_invJ (a_invJ, nip*dim*dim); 160*e8d2b73aSMark Adams auto invJ = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("invJ", nip*dim*dim); 161*e8d2b73aSMark Adams SData_d->invJ = static_cast<void*>(invJ); 162*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_x (a_x, nip); 163*e8d2b73aSMark Adams auto x = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("x", nip); 164*e8d2b73aSMark Adams SData_d->x = static_cast<void*>(x); 165*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_y (a_y, nip); 166*e8d2b73aSMark Adams auto y = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("y", nip); 167*e8d2b73aSMark Adams SData_d->y = static_cast<void*>(y); 168*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_w (a_w, nip); 169*e8d2b73aSMark Adams auto w = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("w", nip); 170*e8d2b73aSMark Adams SData_d->w = static_cast<void*>(w); 171*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_z (a_z , dim==3 ? nip : 0); 172*e8d2b73aSMark Adams auto z = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("z", dim==3 ? nip : 0); 173*e8d2b73aSMark Adams SData_d->z = static_cast<void*>(z); 174*e8d2b73aSMark Adams 175*e8d2b73aSMark Adams Kokkos::deep_copy (*mass_w, h_mass_w); 176*e8d2b73aSMark Adams Kokkos::deep_copy (*alpha, h_alpha); 177*e8d2b73aSMark Adams Kokkos::deep_copy (*beta, h_beta); 178*e8d2b73aSMark Adams Kokkos::deep_copy (*invMass, h_invMass); 179*e8d2b73aSMark Adams Kokkos::deep_copy (*B, h_BB); 180*e8d2b73aSMark Adams Kokkos::deep_copy (*D, h_DD); 181*e8d2b73aSMark Adams Kokkos::deep_copy (*invJ, h_invJ); 182*e8d2b73aSMark Adams Kokkos::deep_copy (*x, h_x); 183*e8d2b73aSMark Adams Kokkos::deep_copy (*y, h_y); 184*e8d2b73aSMark Adams Kokkos::deep_copy (*z, h_z); 185*e8d2b73aSMark Adams Kokkos::deep_copy (*w, h_w); 186*e8d2b73aSMark Adams 187*e8d2b73aSMark Adams auto Eq_m = new Kokkos::View<PetscReal*, Kokkos::LayoutLeft> ("Eq_m",Nf); 188*e8d2b73aSMark Adams SData_d->Eq_m = static_cast<void*>(Eq_m); 189*e8d2b73aSMark Adams auto IPf = new Kokkos::View<PetscScalar*, Kokkos::LayoutLeft> ("IPf",nip*Nf); // Nq==Nb 190*e8d2b73aSMark Adams SData_d->IPf = static_cast<void*>(IPf); 191*e8d2b73aSMark Adams } 192*e8d2b73aSMark Adams PetscFunctionReturn(0); 193*e8d2b73aSMark Adams } 194*e8d2b73aSMark Adams 195*e8d2b73aSMark Adams PetscErrorCode LandauKokkosStaticDataClear(LandauGeomData *SData_d) 196*e8d2b73aSMark Adams { 197*e8d2b73aSMark Adams PetscFunctionBegin; 198*e8d2b73aSMark Adams if (SData_d->alpha) { 199*e8d2b73aSMark Adams auto alpha = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->alpha); 200*e8d2b73aSMark Adams delete alpha; 201*e8d2b73aSMark Adams auto beta = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->beta); 202*e8d2b73aSMark Adams delete beta; 203*e8d2b73aSMark Adams auto invMass = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->invMass); 204*e8d2b73aSMark Adams delete invMass; 205*e8d2b73aSMark Adams auto B = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->B); 206*e8d2b73aSMark Adams delete B; 207*e8d2b73aSMark Adams auto D = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->D); 208*e8d2b73aSMark Adams delete D; 209*e8d2b73aSMark Adams auto mass_w = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->mass_w); 210*e8d2b73aSMark Adams delete mass_w; 211*e8d2b73aSMark Adams auto invJ = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->invJ); 212*e8d2b73aSMark Adams delete invJ; 213*e8d2b73aSMark Adams auto x = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->x); 214*e8d2b73aSMark Adams delete x; 215*e8d2b73aSMark Adams auto y = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->y); 216*e8d2b73aSMark Adams delete y; 217*e8d2b73aSMark Adams auto z = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->z); 218*e8d2b73aSMark Adams delete z; 219*e8d2b73aSMark Adams auto w = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->w); 220*e8d2b73aSMark Adams delete w; 221*e8d2b73aSMark Adams auto Eq_m = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->Eq_m); 222*e8d2b73aSMark Adams delete Eq_m; 223*e8d2b73aSMark Adams auto IPf = static_cast<Kokkos::View<PetscScalar*, Kokkos::LayoutLeft>*>(SData_d->IPf); 224*e8d2b73aSMark Adams delete IPf; 225*e8d2b73aSMark Adams } 226*e8d2b73aSMark Adams PetscFunctionReturn(0); 227*e8d2b73aSMark Adams } 228*e8d2b73aSMark Adams 229*e8d2b73aSMark Adams PetscErrorCode LandauKokkosJacobian(DM plex, const PetscInt Nq, PetscReal a_Eq_m[], PetscScalar a_IPf[], LandauGeomData *SData_d, const PetscInt num_sub_blocks, PetscReal shift, 230*e8d2b73aSMark Adams const PetscLogEvent events[], Mat JacP) 231*e8d2b73aSMark Adams { 232*e8d2b73aSMark Adams using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 233*e8d2b73aSMark Adams using g2_scr_t = Kokkos::View<PetscReal***, Kokkos::LayoutRight, scr_mem_t>; 234*e8d2b73aSMark Adams using g3_scr_t = Kokkos::View<PetscReal****, Kokkos::LayoutRight, scr_mem_t>; 235*e8d2b73aSMark Adams PetscErrorCode ierr; 236*e8d2b73aSMark Adams PetscInt *Nbf,Nb,cStart,cEnd,Nf,dim,numCells,totDim,global_elem_mat_sz,nip; 237*e8d2b73aSMark Adams PetscDS prob; 238*e8d2b73aSMark Adams LandauCtx *ctx; 239*e8d2b73aSMark Adams PetscReal *d_Eq_m=NULL; 240*e8d2b73aSMark Adams PetscScalar *d_IPf=NULL; 241*e8d2b73aSMark Adams P4estVertexMaps *d_maps=NULL; 242*e8d2b73aSMark Adams PetscSplitCSRDataStructure *d_mat=NULL; 243*e8d2b73aSMark Adams const int conc = Kokkos::DefaultExecutionSpace().concurrency(), team_size = conc > Nq ? Nq : 1; 244*e8d2b73aSMark Adams int scr_bytes,nnn = 256/Nq; 245*e8d2b73aSMark Adams auto d_alpha_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->alpha); //static data 246*e8d2b73aSMark Adams const PetscReal *d_alpha = d_alpha_k->data(); 247*e8d2b73aSMark Adams auto d_beta_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->beta); 248*e8d2b73aSMark Adams const PetscReal *d_beta = d_beta_k->data(); 249*e8d2b73aSMark Adams auto d_invMass_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->invMass); 250*e8d2b73aSMark Adams const PetscReal *d_invMass = d_invMass_k->data(); 251*e8d2b73aSMark Adams auto d_B_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->B); 252*e8d2b73aSMark Adams const PetscReal *d_BB = d_B_k->data(); 253*e8d2b73aSMark Adams auto d_D_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->D); 254*e8d2b73aSMark Adams const PetscReal *d_DD = d_D_k->data(); 255*e8d2b73aSMark Adams auto d_mass_w_k = *static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->mass_w); 256*e8d2b73aSMark Adams auto d_invJ_k = *static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->invJ); // use Kokkos vector in kernels 257*e8d2b73aSMark Adams auto d_x_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->x); //static data 258*e8d2b73aSMark Adams const PetscReal *d_x = d_x_k->data(); 259*e8d2b73aSMark Adams auto d_y_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->y); //static data 260*e8d2b73aSMark Adams const PetscReal *d_y = d_y_k->data(); 261*e8d2b73aSMark Adams auto d_z_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->z); //static data 262*e8d2b73aSMark Adams const PetscReal *d_z = d_z_k->data(); 263*e8d2b73aSMark Adams auto d_w_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->w); //static data 264*e8d2b73aSMark Adams const PetscReal *d_w = d_w_k->data(); 265*e8d2b73aSMark Adams // dynamic data pointers 266*e8d2b73aSMark Adams auto d_Eq_m_k = static_cast<Kokkos::View<PetscReal*, Kokkos::LayoutLeft>*>(SData_d->Eq_m); //static data 267*e8d2b73aSMark Adams auto d_IPf_k = static_cast<Kokkos::View<PetscScalar*, Kokkos::LayoutLeft>*>(SData_d->IPf); //static data 268*e8d2b73aSMark Adams 269*e8d2b73aSMark Adams PetscFunctionBegin; 270*e8d2b73aSMark Adams while (nnn & (nnn - 1)) nnn = nnn & (nnn - 1); 271*e8d2b73aSMark Adams if (nnn>16) nnn = 16; 272*e8d2b73aSMark Adams ierr = PetscLogEventBegin(events[3],0,0,0,0);CHKERRQ(ierr); 273*e8d2b73aSMark Adams ierr = DMGetApplicationContext(plex, &ctx);CHKERRQ(ierr); 274*e8d2b73aSMark Adams if (!ctx) SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "no context"); 275*e8d2b73aSMark Adams ierr = DMGetDimension(plex, &dim);CHKERRQ(ierr); 276*e8d2b73aSMark Adams ierr = DMPlexGetHeightStratum(plex,0,&cStart,&cEnd);CHKERRQ(ierr); 277*e8d2b73aSMark Adams numCells = cEnd - cStart; 278*e8d2b73aSMark Adams nip = numCells*Nq; 279*e8d2b73aSMark Adams ierr = DMGetDS(plex, &prob);CHKERRQ(ierr); 280*e8d2b73aSMark Adams ierr = PetscDSGetNumFields(prob, &Nf);CHKERRQ(ierr); 281*e8d2b73aSMark Adams ierr = PetscDSGetDimensions(prob, &Nbf);CHKERRQ(ierr); Nb = Nbf[0]; 282*e8d2b73aSMark Adams if (Nq != Nb) SETERRQ2(PETSC_COMM_SELF, PETSC_ERR_PLIB, "Nq != Nb. %D %D",Nq,Nb); 283*e8d2b73aSMark Adams if (LANDAU_DIM != dim) SETERRQ2(PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %D != LANDAU_DIM %d",dim,LANDAU_DIM); 284*e8d2b73aSMark Adams scr_bytes = 2*(g2_scr_t::shmem_size(dim,Nf,Nq) + g3_scr_t::shmem_size(dim,dim,Nf,Nq)); 285*e8d2b73aSMark Adams ierr = PetscDSGetTotalDimension(prob, &totDim);CHKERRQ(ierr); 286a587d139SMark if (ctx->gpu_assembly) { 287a587d139SMark PetscContainer container; 288a587d139SMark ierr = PetscObjectQuery((PetscObject) JacP, "assembly_maps", (PetscObject *) &container);CHKERRQ(ierr); 289a587d139SMark if (container) { // not here first call 290a587d139SMark #if defined(PETSC_HAVE_KOKKOS_KERNELS) 291a587d139SMark P4estVertexMaps *h_maps=NULL; 292a587d139SMark ierr = PetscContainerGetPointer(container, (void **) &h_maps);CHKERRQ(ierr); 293a587d139SMark if (h_maps->data) { 294a587d139SMark d_maps = h_maps->data; 295a587d139SMark } else { 296a587d139SMark SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 297a587d139SMark } 298a587d139SMark // this does the setup the first time called 299a587d139SMark ierr = MatKokkosGetDeviceMatWrite(JacP,&d_mat);CHKERRQ(ierr); 300a587d139SMark global_elem_mat_sz = 0; 301a587d139SMark #else 302a587d139SMark SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly w/o kokkos kernels -- should not be here"); 303a587d139SMark #endif 304a587d139SMark } else { // kernel output - first call assembled on device 305a587d139SMark global_elem_mat_sz = numCells; 306a587d139SMark } 307a587d139SMark } else { 308a587d139SMark global_elem_mat_sz = numCells; // no device assembly 309a587d139SMark } 31052cdd6eaSMark ierr = PetscKokkosInitializeCheck();CHKERRQ(ierr); 311e0eea495SMark ierr = PetscLogEventEnd(events[3],0,0,0,0);CHKERRQ(ierr); 312*e8d2b73aSMark Adams { 313*e8d2b73aSMark Adams Kokkos::View<PetscReal**, Kokkos::LayoutRight> d_f_k ("f", Nf, a_IPf ? nip : 0); // allocated each run, computed and used on GPU 314*e8d2b73aSMark Adams Kokkos::View<PetscReal***, Kokkos::LayoutRight> d_df_k("df", dim, Nf, a_IPf ? nip : 0); 315*e8d2b73aSMark Adams const Kokkos::View<PetscScalar*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> >h_IPf_k (a_IPf, a_IPf ? nip*Nf : 0); 316*e8d2b73aSMark Adams const Kokkos::View<PetscReal*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_Eq_m_k (a_Eq_m, a_IPf ? Nf : 0); 317*e8d2b73aSMark Adams Kokkos::View<PetscScalar**, Kokkos::LayoutRight> d_elem_mats("element matrices", global_elem_mat_sz, totDim*totDim); 318*e8d2b73aSMark Adams // copy dynamic data to device 319*e8d2b73aSMark Adams if (a_IPf) { 320*e8d2b73aSMark Adams ierr = PetscLogEventBegin(events[1],0,0,0,0);CHKERRQ(ierr); 321*e8d2b73aSMark Adams Kokkos::deep_copy (*d_IPf_k, h_IPf_k); 322*e8d2b73aSMark Adams Kokkos::deep_copy (*d_Eq_m_k, h_Eq_m_k); 323*e8d2b73aSMark Adams d_Eq_m = d_Eq_m_k->data(); 324*e8d2b73aSMark Adams d_IPf = d_IPf_k->data(); 325*e8d2b73aSMark Adams ierr = PetscLogEventEnd(events[1],0,0,0,0);CHKERRQ(ierr); 326e0eea495SMark #define KOKKOS_SHARED_LEVEL 1 327*e8d2b73aSMark Adams // PetscInfo5(plex, "shared memory size: %d bytes in level %d. mass_w.size=%d. #threads=%D team size=%D\n",scr_bytes,KOKKOS_SHARED_LEVEL,d_mass_w.size(),nnn,team_size); 328a587d139SMark // get f and df 329930e68a5SMark Adams ierr = PetscLogEventBegin(events[8],0,0,0,0);CHKERRQ(ierr); 33090d163c9SMark Adams ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 331*e8d2b73aSMark Adams Kokkos::parallel_for("f, df", Kokkos::TeamPolicy<>(numCells, team_size, nnn>Nf ? Nf : nnn), KOKKOS_LAMBDA (const team_member team) { 332a587d139SMark const PetscInt myelem = team.league_rank(); 333a587d139SMark // un pack IPData 334*e8d2b73aSMark Adams PetscScalar *coef = &d_IPf[myelem*Nb*Nf]; 335a587d139SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team,0,Nq), [=] (int myQi) { 336a587d139SMark const PetscInt ipidx = myQi + myelem * Nq; 337*e8d2b73aSMark Adams const PetscReal *const invJj = &d_invJ_k(ipidx*dim*dim); 338a587d139SMark const PetscReal *Bq = &d_BB[myQi*Nb], *Dq = &d_DD[myQi*Nb*dim]; 339a587d139SMark Kokkos::parallel_for(Kokkos::ThreadVectorRange(team,0,(int)Nf), [=] (int f) { 340a587d139SMark PetscInt b, e, d; 341*e8d2b73aSMark Adams PetscReal refSpaceDer[LANDAU_DIM]; 342*e8d2b73aSMark Adams d_f_k(f,ipidx) = 0.0; 343a587d139SMark for (d = 0; d < LANDAU_DIM; ++d) refSpaceDer[d] = 0.0; 344a587d139SMark for (b = 0; b < Nb; ++b) { 345a587d139SMark const PetscInt cidx = b; 346*e8d2b73aSMark Adams d_f_k(f,ipidx) += Bq[cidx]*coef[f*Nb+cidx]; 347a587d139SMark for (d = 0; d < dim; ++d) refSpaceDer[d] += Dq[cidx*dim+d]*coef[f*Nb+cidx]; 348a587d139SMark } 349a587d139SMark for (d = 0; d < dim; ++d) { 350*e8d2b73aSMark Adams for (e = 0, d_df_k(d,f,ipidx) = 0.0; e < dim; ++e) { 351*e8d2b73aSMark Adams d_df_k(d,f,ipidx) += invJj[e*dim+d]*refSpaceDer[e]; 352a587d139SMark } 353a587d139SMark } 354a587d139SMark }); // Nf 355a587d139SMark }); // Nq 356a587d139SMark }); // elems 357a587d139SMark Kokkos::fence(); 35890d163c9SMark Adams #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 35990d163c9SMark Adams ierr = PetscLogGpuFlops(nip*(PetscLogDouble)(2*Nb*(1+dim)));CHKERRQ(ierr); 36090d163c9SMark Adams #else 36190d163c9SMark Adams ierr = PetscLogFlops(nip*(PetscLogDouble)(2*Nb*(1+dim)));CHKERRQ(ierr); 36290d163c9SMark Adams #endif 36390d163c9SMark Adams ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 364930e68a5SMark Adams ierr = PetscLogEventEnd(events[8],0,0,0,0);CHKERRQ(ierr); 365930e68a5SMark Adams } 366a587d139SMark ierr = PetscLogEventBegin(events[4],0,0,0,0);CHKERRQ(ierr); 367930e68a5SMark Adams ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 36890d163c9SMark Adams #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 369*e8d2b73aSMark Adams ierr = PetscLogGpuFlops(nip*(PetscLogDouble)(!a_IPf ? (nip*(11*Nf+ 4*dim*dim) + 6*Nf*dim*dim*dim + 10*Nf*dim*dim + 4*Nf*dim + Nb*Nf*Nb*Nq*dim*dim*5) : Nb*Nf*Nb*Nq*4));CHKERRQ(ierr); 37090d163c9SMark Adams if (ctx->deviceType == LANDAU_CPU) PetscInfo(plex, "Warning: Landau selected CPU but no support for Kokkos using CPU\n"); 37190d163c9SMark Adams #else 372*e8d2b73aSMark Adams ierr = PetscLogFlops(nip*(PetscLogDouble)(!a_IPf ? (nip*(11*Nf+ 4*dim*dim) + 6*Nf*dim*dim*dim + 10*Nf*dim*dim + 4*Nf*dim + Nb*Nf*Nb*Nq*dim*dim*5) : Nb*Nf*Nb*Nq*4));CHKERRQ(ierr); 37390d163c9SMark Adams #endif 374*e8d2b73aSMark Adams Kokkos::parallel_for("Landau elements", Kokkos::TeamPolicy<>(numCells, team_size, nnn).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerTeam(scr_bytes)), KOKKOS_LAMBDA (const team_member team) { 375e0eea495SMark const PetscInt myelem = team.league_rank(); 376930e68a5SMark Adams g2_scr_t g2(team.team_scratch(KOKKOS_SHARED_LEVEL),dim,Nf,Nq); // we don't use these for mass matrix 37752cdd6eaSMark g3_scr_t g3(team.team_scratch(KOKKOS_SHARED_LEVEL),dim,dim,Nf,Nq); 378*e8d2b73aSMark Adams if (d_IPf) { 37952cdd6eaSMark g2_scr_t gg2(team.team_scratch(KOKKOS_SHARED_LEVEL),dim,Nf,Nq); 38052cdd6eaSMark g3_scr_t gg3(team.team_scratch(KOKKOS_SHARED_LEVEL),dim,dim,Nf,Nq); 381e0eea495SMark // get g2[] & g3[] 382e0eea495SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team,0,Nq), [=] (int myQi) { 383e0eea495SMark using Kokkos::parallel_reduce; 384e0eea495SMark const PetscInt jpidx = myQi + myelem * Nq; 385*e8d2b73aSMark Adams const PetscReal* const invJj = &d_invJ_k(jpidx*dim*dim); 386*e8d2b73aSMark Adams const PetscReal vj[3] = {d_x[jpidx], d_y[jpidx], d_z ? d_z[jpidx] : 0}, wj = d_w[jpidx]; 38752cdd6eaSMark landau_inner_red::TensorValueType gg_temp; // reduce on part of gg2 and g33 for IP jpidx 388930e68a5SMark Adams Kokkos::parallel_reduce(Kokkos::ThreadVectorRange (team, (int)nip), [=] (const int& ipidx, landau_inner_red::TensorValueType & ggg) { 389*e8d2b73aSMark Adams const PetscReal wi = d_w[ipidx], x = d_x[ipidx], y = d_y[ipidx]; 390*e8d2b73aSMark Adams //printf("\t\t:%d.%d) ip %d, w=%e x=%e y=%e f[0]=%e\n",myelem,myQi,ipidx,wi,x,y,d_df_k(0,0,ipidx)); 39152cdd6eaSMark PetscReal temp1[3] = {0, 0, 0}, temp2 = 0; 39252cdd6eaSMark PetscInt fieldA,d2,d3; 393e0eea495SMark #if LANDAU_DIM==2 394e0eea495SMark PetscReal Ud[2][2], Uk[2][2]; 39552cdd6eaSMark LandauTensor2D(vj, x, y, Ud, Uk, (ipidx==jpidx) ? 0. : 1.); 39652cdd6eaSMark #else 397*e8d2b73aSMark Adams PetscReal U[3][3], z = d_z[ipidx]; 39852cdd6eaSMark LandauTensor3D(vj, x, y, z, U, (ipidx==jpidx) ? 0. : 1.); 39952cdd6eaSMark #endif 400e0eea495SMark for (fieldA = 0; fieldA < Nf; ++fieldA) { 401*e8d2b73aSMark Adams temp1[0] += d_df_k(0,fieldA,ipidx)*d_beta[fieldA]*d_invMass[fieldA]; 402*e8d2b73aSMark Adams temp1[1] += d_df_k(1,fieldA,ipidx)*d_beta[fieldA]*d_invMass[fieldA]; 40352cdd6eaSMark #if LANDAU_DIM==3 404*e8d2b73aSMark Adams temp1[2] += d_df_k(2,fieldA,ipidx)*d_beta[fieldA]*d_invMass[fieldA]; 40552cdd6eaSMark #endif 406*e8d2b73aSMark Adams temp2 += d_f_k(fieldA,ipidx)*d_beta[fieldA]; 40752cdd6eaSMark } 40852cdd6eaSMark temp1[0] *= wi; 40952cdd6eaSMark temp1[1] *= wi; 41052cdd6eaSMark #if LANDAU_DIM==3 41152cdd6eaSMark temp1[2] *= wi; 41252cdd6eaSMark #endif 41352cdd6eaSMark temp2 *= wi; 41452cdd6eaSMark #if LANDAU_DIM==2 41552cdd6eaSMark for (d2 = 0; d2 < 2; d2++) { 416e0eea495SMark for (d3 = 0; d3 < 2; ++d3) { 417e0eea495SMark /* K = U * grad(f): g2=e: i,A */ 41852cdd6eaSMark ggg.gg2[d2] += Uk[d2][d3]*temp1[d3]; 419e0eea495SMark /* D = -U * (I \kron (fx)): g3=f: i,j,A */ 42052cdd6eaSMark ggg.gg3[d2][d3] += Ud[d2][d3]*temp2; 421e0eea495SMark } 422e0eea495SMark } 423e0eea495SMark #else 424e0eea495SMark for (d2 = 0; d2 < 3; ++d2) { 425e0eea495SMark for (d3 = 0; d3 < 3; ++d3) { 426e0eea495SMark /* K = U * grad(f): g2 = e: i,A */ 42752cdd6eaSMark ggg.gg2[d2] += U[d2][d3]*temp1[d3]; 428e0eea495SMark /* D = -U * (I \kron (fx)): g3 = f: i,j,A */ 42952cdd6eaSMark ggg.gg3[d2][d3] += U[d2][d3]*temp2; 430e0eea495SMark } 431e0eea495SMark } 432e0eea495SMark #endif 43352cdd6eaSMark }, Kokkos::Sum<landau_inner_red::TensorValueType>(gg_temp)); 43452cdd6eaSMark // if (myelem==0) printf("\t:%d.%d) temp gg3=%e %e %e %e\n",myelem,myQi,gg_temp.gg3[0][0],gg_temp.gg3[1][0],gg_temp.gg3[0][1],gg_temp.gg3[1][1]); 43552cdd6eaSMark // add alpha and put in gg2/3 43637e8a436SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange (team, (int)Nf), [&] (const int& fieldA) { 43752cdd6eaSMark PetscInt d2,d3; 43852cdd6eaSMark for (d2 = 0; d2 < dim; d2++) { 43952cdd6eaSMark gg2(d2,fieldA,myQi) = gg_temp.gg2[d2]*d_alpha[fieldA]; 440*e8d2b73aSMark Adams //if (myelem==0 && fieldA==1) printf("\t\t:%d.%d) gg2[%d]=%e = %e %e\n",myelem,myQi,d2,gg2(d2,fieldA,myQi),gg_temp.gg2[d2],d_alpha[fieldA]); 44152cdd6eaSMark //gg2[d2][myQi][fieldA] += gg_temp.gg2[d2]*d_alpha[fieldA]; 44252cdd6eaSMark for (d3 = 0; d3 < dim; d3++) { 44352cdd6eaSMark //gg3[d2][d3][myQi][fieldA] -= gg_temp.gg3[d2][d3]*d_alpha[fieldA]*s_invMass[fieldA]; 44452cdd6eaSMark gg3(d2,d3,fieldA,myQi) = -gg_temp.gg3[d2][d3]*d_alpha[fieldA]*d_invMass[fieldA]; 44552cdd6eaSMark //if (myelem==0 && fieldA==1) printf("\t\t\t:%d.%d) gg3[%d][%d]=%e\n",myelem,myQi,d2,d3,gg3(d2,d3,fieldA,myQi)); 44652cdd6eaSMark } 44752cdd6eaSMark } 448e0eea495SMark }); 44952cdd6eaSMark /* add electric field term once per IP */ 45052cdd6eaSMark Kokkos::parallel_for(Kokkos::ThreadVectorRange (team, (int)Nf), [&] (const int& fieldA) { 45152cdd6eaSMark //gg.gg2[fieldA][dim-1] += d_Eq_m[fieldA]; 45252cdd6eaSMark gg2(dim-1,fieldA,myQi) += d_Eq_m[fieldA]; 45352cdd6eaSMark }); 45452cdd6eaSMark // Kokkos::single(Kokkos::PerThread(team), [&]() { 45537e8a436SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange (team, (int)Nf), [=] (const int& fieldA) { 456e0eea495SMark int d,d2,d3,dp; 457e0eea495SMark //printf("%d %d %d gg2[][1]=%18.10e\n",myelem,myQi,fieldA,gg.gg2[fieldA][dim-1]); 458e0eea495SMark /* Jacobian transform - g2, g3 - per thread (2D) */ 459e0eea495SMark for (d = 0; d < dim; ++d) { 46052cdd6eaSMark g2(d,fieldA,myQi) = 0; 461e0eea495SMark for (d2 = 0; d2 < dim; ++d2) { 46252cdd6eaSMark g2(d,fieldA,myQi) += invJj[d*dim+d2]*gg2(d2,fieldA,myQi); 46352cdd6eaSMark //if (myelem==0 && myQi==0) printf("\t:g2[%d][%d][%d]=%e. %e %e\n",(int)myQi,(int)fieldA,(int)d,g2(fieldA,myQi,d),invJj[d*dim+d2],gg.gg2[fieldA][d2]); 46452cdd6eaSMark g3(d,d2,fieldA,myQi) = 0; 465e0eea495SMark for (d3 = 0; d3 < dim; ++d3) { 466e0eea495SMark for (dp = 0; dp < dim; ++dp) { 46752cdd6eaSMark g3(d,d2,fieldA,myQi) += invJj[d*dim + d3]*gg3(d3,dp,fieldA,myQi)*invJj[d2*dim + dp]; 468e0eea495SMark //printf("\t%d %d %d %d %d %d %d g3=%g wj=%g g3 = %g * %g * %g\n",myelem,myQi,fieldA,d,d2,d3,dp,g3(fieldA,myQi,d,d2),wj,invJj[d*dim + d3],gg.gg3[fieldA][d3][dp],invJj[d2*dim + dp]); 469e0eea495SMark } 470e0eea495SMark } 47152cdd6eaSMark g3(d,d2,fieldA,myQi) *= wj; 472e0eea495SMark } 47352cdd6eaSMark g2(d,fieldA,myQi) *= wj; 474e0eea495SMark } 475e0eea495SMark }); 47652cdd6eaSMark }); // Nq 477e0eea495SMark team.team_barrier(); 478930e68a5SMark Adams } // Jacobian 479930e68a5SMark Adams /* assemble */ 480e0eea495SMark //Kokkos::single(Kokkos::PerTeam(team), [&]() { 481e0eea495SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team,0,Nb), [=] (int blk_i) { 48237e8a436SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team,0,(int)Nf), [=] (int fieldA) { 483e0eea495SMark int blk_j,qj,d,d2; 484e0eea495SMark const PetscInt i = fieldA*Nb + blk_i; /* Element matrix row */ 485e0eea495SMark for (blk_j = 0; blk_j < Nb; ++blk_j) { 486e0eea495SMark const PetscInt j = fieldA*Nb + blk_j; /* Element matrix column */ 487e0eea495SMark const PetscInt fOff = i*totDim + j; 488a587d139SMark PetscScalar t = global_elem_mat_sz ? d_elem_mats(myelem,fOff) : 0; 489e0eea495SMark for (qj = 0 ; qj < Nq ; qj++) { // look at others integration points 490e0eea495SMark const PetscReal *BJq = &d_BB[qj*Nb], *DIq = &d_DD[qj*Nb*dim]; 491*e8d2b73aSMark Adams if (d_IPf) { 492e0eea495SMark for (d = 0; d < dim; ++d) { 493a587d139SMark t += DIq[blk_i*dim+d]*g2(d,fieldA,qj)*BJq[blk_j]; 494e0eea495SMark for (d2 = 0; d2 < dim; ++d2) { 495a587d139SMark t += DIq[blk_i*dim + d]*g3(d,d2,fieldA,qj)*DIq[blk_j*dim + d2]; 496e0eea495SMark } 497e0eea495SMark } 498930e68a5SMark Adams } else { 499930e68a5SMark Adams const PetscInt jpidx = qj + myelem * Nq; 500*e8d2b73aSMark Adams t += BJq[blk_i] * d_mass_w_k(jpidx) * shift * BJq[blk_j]; 501*e8d2b73aSMark Adams //printf("\tmat[%d %d %d %d %d]: B=%g w=%g shift=%g B=%g\n",myelem,fOff,fieldA,qj,d,BJq[blk_i],d_mass_w_k(jpidx),shift,BJq[blk_j]); 502930e68a5SMark Adams } 503e0eea495SMark } 504a587d139SMark if (global_elem_mat_sz) d_elem_mats(myelem,fOff) = t; // can set this because local element matrix[fOff] 505a587d139SMark else { 506a587d139SMark PetscErrorCode ierr = 0; 5078f7e8f9dSMark Adams PetscScalar vals[LANDAU_MAX_Q_FACE*LANDAU_MAX_Q_FACE],row_scale[LANDAU_MAX_Q_FACE],col_scale[LANDAU_MAX_Q_FACE]; 5088f7e8f9dSMark Adams PetscInt q,idx,nr,nc,rows0[LANDAU_MAX_Q_FACE],cols0[LANDAU_MAX_Q_FACE],rows[LANDAU_MAX_Q_FACE],cols[LANDAU_MAX_Q_FACE]; 509a587d139SMark const LandauIdx *const Idxs = &d_maps->gIdx[myelem][fieldA][0]; 510a587d139SMark idx = Idxs[blk_i]; 511a587d139SMark if (idx >= 0) { 512a587d139SMark nr = 1; 513a587d139SMark rows0[0] = idx; 514a587d139SMark row_scale[0] = 1.; 515a587d139SMark } else { 516a587d139SMark idx = -idx - 1; 517a587d139SMark nr = d_maps->num_face; 518a587d139SMark for (q = 0; q < d_maps->num_face; q++) { 519a587d139SMark rows0[q] = d_maps->c_maps[idx][q].gid; 520a587d139SMark row_scale[q] = d_maps->c_maps[idx][q].scale; 521a587d139SMark } 522a587d139SMark } 523a587d139SMark idx = Idxs[blk_j]; 524a587d139SMark if (idx >= 0) { 525a587d139SMark nc = 1; 526a587d139SMark cols0[0] = idx; 527a587d139SMark col_scale[0] = 1.; 528a587d139SMark } else { 529a587d139SMark idx = -idx - 1; 530a587d139SMark nc = d_maps->num_face; 531a587d139SMark for (q = 0; q < d_maps->num_face; q++) { 532a587d139SMark cols0[q] = d_maps->c_maps[idx][q].gid; 533a587d139SMark col_scale[q] = d_maps->c_maps[idx][q].scale; 534a587d139SMark } 535a587d139SMark } 536a587d139SMark for (q = 0; q < nr; q++) rows[q] = rows0[q]; 537a587d139SMark for (q = 0; q < nc; q++) cols[q] = cols0[q]; 538a587d139SMark for (q = 0; q < nr; q++) { 539a587d139SMark for (d = 0; d < nc; d++) { 540a587d139SMark vals[q*nc + d] = row_scale[q]*col_scale[d]*t; 541a587d139SMark } 542a587d139SMark } 543a587d139SMark MatSetValuesDevice(d_mat,nr,rows,nc,cols,vals,ADD_VALUES,&ierr); 544a587d139SMark if (ierr) return; 545a587d139SMark } 546e0eea495SMark } 547e0eea495SMark }); 548e0eea495SMark }); 549e0eea495SMark }); 550930e68a5SMark Adams ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 551*e8d2b73aSMark Adams Kokkos::fence(); 552e0eea495SMark ierr = PetscLogEventEnd(events[4],0,0,0,0);CHKERRQ(ierr); 553a587d139SMark if (global_elem_mat_sz) { 554*e8d2b73aSMark Adams PetscSection section, globalSection; 555a587d139SMark Kokkos::View<PetscScalar**, Kokkos::LayoutRight>::HostMirror h_elem_mats = Kokkos::create_mirror_view(d_elem_mats); 556e0eea495SMark ierr = PetscLogEventBegin(events[5],0,0,0,0);CHKERRQ(ierr); 557*e8d2b73aSMark Adams ierr = DMGetLocalSection(plex, §ion);CHKERRQ(ierr); 558*e8d2b73aSMark Adams ierr = DMGetGlobalSection(plex, &globalSection);CHKERRQ(ierr); 559e0eea495SMark Kokkos::deep_copy (h_elem_mats, d_elem_mats); 560e0eea495SMark ierr = PetscLogEventEnd(events[5],0,0,0,0);CHKERRQ(ierr); 561e0eea495SMark ierr = PetscLogEventBegin(events[6],0,0,0,0);CHKERRQ(ierr); 562e0eea495SMark PetscInt ej; 563e0eea495SMark for (ej = cStart ; ej < cEnd; ++ej) { 564e0eea495SMark const PetscScalar *elMat = &h_elem_mats(ej-cStart,0); 565e0eea495SMark ierr = DMPlexMatSetClosure(plex, section, globalSection, JacP, ej, elMat, ADD_VALUES);CHKERRQ(ierr); 566e0eea495SMark if (ej==-1) { 567e0eea495SMark int d,f; 56852cdd6eaSMark PetscPrintf(PETSC_COMM_SELF,"Kokkos Element matrix %d/%d\n",1,(int)numCells); 569e0eea495SMark for (d = 0; d < totDim; ++d){ 57052cdd6eaSMark for (f = 0; f < totDim; ++f) PetscPrintf(PETSC_COMM_SELF," %12.5e", PetscRealPart(elMat[d*totDim + f])); 57152cdd6eaSMark PetscPrintf(PETSC_COMM_SELF,"\n"); 572e0eea495SMark } 573*e8d2b73aSMark Adams exit(14); 574e0eea495SMark } 575e0eea495SMark } 576e0eea495SMark ierr = PetscLogEventEnd(events[6],0,0,0,0);CHKERRQ(ierr); 577e0eea495SMark } 578a587d139SMark } 579e0eea495SMark PetscFunctionReturn(0); 580e0eea495SMark } 581e0eea495SMark } // extern "C" 582