1e0eea495SMark /* 2e0eea495SMark Implements the Kokkos kernel 3e0eea495SMark */ 4e0eea495SMark #include <petscconf.h> 58d80707aSStefano Zampini #if defined(PETSC_HAVE_CUDA_CLANG) 68d80707aSStefano Zampini #include <petsclandau.h> 78d80707aSStefano Zampini #define LANDAU_NOT_IMPLEMENTED SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Not supported with CLANG") 8*ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosJacobian(DM[], const PetscInt, const PetscInt, const PetscInt, const PetscInt[], PetscReal[], PetscScalar[], const PetscScalar[], const LandauStaticData *, const PetscReal, const PetscLogEvent[], const PetscInt[], const PetscInt[], Mat[], Mat) 98d80707aSStefano Zampini { 108d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 118d80707aSStefano Zampini } 12*ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps *, pointInterpolationP4est (*)[LANDAU_MAX_Q_FACE], PetscInt[], PetscInt, PetscInt) 138d80707aSStefano Zampini { 148d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 158d80707aSStefano Zampini } 16*ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps *, PetscInt) 178d80707aSStefano Zampini { 188d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 198d80707aSStefano Zampini } 20*ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosStaticDataSet(DM, const PetscInt, const PetscInt, const PetscInt, PetscInt[], PetscInt[], PetscInt[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], PetscReal[], LandauStaticData *) 218d80707aSStefano Zampini { 228d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 238d80707aSStefano Zampini } 24*ffb3bc9aSStefano Zampini PetscErrorCode LandauKokkosStaticDataClear(LandauStaticData *) 258d80707aSStefano Zampini { 268d80707aSStefano Zampini LANDAU_NOT_IMPLEMENTED; 278d80707aSStefano Zampini } 288d80707aSStefano Zampini #else 2911d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 308d80707aSStefano Zampini #include <petsclandau.h> 31e0eea495SMark #include <petsc/private/dmpleximpl.h> /*I "petscdmplex.h" I*/ 32a16fd2c9SJacob Faibussowitsch #include <petsc/private/deviceimpl.h> 33e0eea495SMark #include <petscts.h> 34a587d139SMark 35e0eea495SMark #include <Kokkos_Core.hpp> 36e0eea495SMark #include <cstdio> 37e0eea495SMark typedef Kokkos::TeamPolicy<>::member_type team_member; 38e0eea495SMark #include "../land_tensors.h" 39a587d139SMark #include <petscaijdevice.h> 40e0eea495SMark 41d71ae5a4SJacob Faibussowitsch namespace landau_inner_red 42d71ae5a4SJacob Faibussowitsch { // namespace helps with name resolution in reduction identity 4352cdd6eaSMark template <class ScalarType> 44e0eea495SMark struct array_type { 4552cdd6eaSMark ScalarType gg2[LANDAU_DIM]; 4652cdd6eaSMark ScalarType gg3[LANDAU_DIM][LANDAU_DIM]; 47e0eea495SMark 48e0eea495SMark KOKKOS_INLINE_FUNCTION // Default constructor - Initialize to 0's 49d71ae5a4SJacob Faibussowitsch array_type() 50d71ae5a4SJacob Faibussowitsch { 51e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 5252cdd6eaSMark gg2[j] = 0; 53ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = 0; 54e0eea495SMark } 55e0eea495SMark } 56e0eea495SMark KOKKOS_INLINE_FUNCTION // Copy Constructor 57d71ae5a4SJacob Faibussowitsch array_type(const array_type &rhs) 58d71ae5a4SJacob Faibussowitsch { 59e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 6052cdd6eaSMark gg2[j] = rhs.gg2[j]; 61ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] = rhs.gg3[j][k]; 62e0eea495SMark } 63e0eea495SMark } 64e0eea495SMark KOKKOS_INLINE_FUNCTION // add operator 659371c9d4SSatish Balay array_type & 66d71ae5a4SJacob Faibussowitsch operator+=(const array_type &src) 67d71ae5a4SJacob Faibussowitsch { 68e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 6952cdd6eaSMark gg2[j] += src.gg2[j]; 70ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 71e0eea495SMark } 72e0eea495SMark return *this; 73e0eea495SMark } 74e0eea495SMark KOKKOS_INLINE_FUNCTION // volatile add operator 759371c9d4SSatish Balay void 76d71ae5a4SJacob Faibussowitsch operator+=(const volatile array_type &src) volatile 77d71ae5a4SJacob Faibussowitsch { 78e0eea495SMark for (int j = 0; j < LANDAU_DIM; j++) { 7952cdd6eaSMark gg2[j] += src.gg2[j]; 80ad540459SPierre Jolivet for (int k = 0; k < LANDAU_DIM; k++) gg3[j][k] += src.gg3[j][k]; 81e0eea495SMark } 82e0eea495SMark } 83e0eea495SMark }; 8452cdd6eaSMark typedef array_type<PetscReal> TensorValueType; // used to simplify code below 859371c9d4SSatish Balay } // namespace landau_inner_red 86e0eea495SMark 87d71ae5a4SJacob Faibussowitsch namespace Kokkos 88d71ae5a4SJacob Faibussowitsch { //reduction identity must be defined in Kokkos namespace 89e0eea495SMark template <> 9052cdd6eaSMark struct reduction_identity<landau_inner_red::TensorValueType> { 919371c9d4SSatish Balay KOKKOS_FORCEINLINE_FUNCTION static landau_inner_red::TensorValueType sum() { return landau_inner_red::TensorValueType(); } 92e0eea495SMark }; 939371c9d4SSatish Balay } // namespace Kokkos 94e0eea495SMark 95e0eea495SMark extern "C" { 96d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosCreateMatMaps(P4estVertexMaps maps[], pointInterpolationP4est (*pointMaps)[LANDAU_MAX_Q_FACE], PetscInt Nf[], PetscInt Nq, PetscInt grid) 97d71ae5a4SJacob Faibussowitsch { 98a587d139SMark P4estVertexMaps h_maps; /* host container */ 998a6f2e61SMark Adams const Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_points((pointInterpolationP4est *)pointMaps, maps[grid].num_reduced); 1008a6f2e61SMark Adams const Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_gidx((LandauIdx *)maps[grid].gIdx, maps[grid].num_elements); 1018a6f2e61SMark Adams Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *d_points = new Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight>("points", maps[grid].num_reduced); 1028a6f2e61SMark Adams Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight> *d_gidx = new Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight>("gIdx", maps[grid].num_elements); 103a587d139SMark 104a587d139SMark PetscFunctionBegin; 105a587d139SMark Kokkos::deep_copy(*d_gidx, h_gidx); 106a587d139SMark Kokkos::deep_copy(*d_points, h_points); 1078a6f2e61SMark Adams h_maps.num_elements = maps[grid].num_elements; 1088a6f2e61SMark Adams h_maps.num_face = maps[grid].num_face; 1098a6f2e61SMark Adams h_maps.num_reduced = maps[grid].num_reduced; 1108a6f2e61SMark Adams h_maps.deviceType = maps[grid].deviceType; 1118a6f2e61SMark Adams h_maps.numgrids = maps[grid].numgrids; 1128a6f2e61SMark Adams h_maps.Nf = Nf[grid]; 113a587d139SMark h_maps.c_maps = (pointInterpolationP4est(*)[LANDAU_MAX_Q_FACE])d_points->data(); 1148a6f2e61SMark Adams maps[grid].vp1 = (void *)d_points; 115a587d139SMark h_maps.gIdx = (LandauIdx(*)[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ])d_gidx->data(); 1168a6f2e61SMark Adams maps[grid].vp2 = (void *)d_gidx; 117a587d139SMark { 118a587d139SMark Kokkos::View<P4estVertexMaps, Kokkos::HostSpace> h_maps_k(&h_maps); 11911d22bbfSJunchao Zhang Kokkos::View<P4estVertexMaps> *d_maps_k = new Kokkos::View<P4estVertexMaps>(Kokkos::create_mirror(Kokkos::DefaultExecutionSpace::memory_space(), h_maps_k)); 120a587d139SMark Kokkos::deep_copy(*d_maps_k, h_maps_k); 1218a6f2e61SMark Adams maps[grid].d_self = d_maps_k->data(); 1228a6f2e61SMark Adams maps[grid].vp3 = (void *)d_maps_k; 123a587d139SMark } 124a587d139SMark PetscFunctionReturn(0); 125a587d139SMark } 126d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosDestroyMatMaps(P4estVertexMaps maps[], PetscInt num_grids) 127d71ae5a4SJacob Faibussowitsch { 128362febeeSStefano Zampini PetscFunctionBegin; 1298a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 1308a6f2e61SMark Adams auto a = static_cast<Kokkos::View<pointInterpolationP4est *[LANDAU_MAX_Q_FACE], Kokkos::LayoutRight> *>(maps[grid].vp1); 1318a6f2e61SMark Adams auto b = static_cast<Kokkos::View<LandauIdx *[LANDAU_MAX_SPECIES][LANDAU_MAX_NQ], Kokkos::LayoutRight> *>(maps[grid].vp2); 1328a6f2e61SMark Adams auto c = static_cast<Kokkos::View<P4estVertexMaps *> *>(maps[grid].vp3); 1339371c9d4SSatish Balay delete a; 1349371c9d4SSatish Balay delete b; 1359371c9d4SSatish Balay delete c; 1368a6f2e61SMark Adams } 137a587d139SMark PetscFunctionReturn(0); 138a587d139SMark } 139a587d139SMark 140d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosStaticDataSet(DM plex, const PetscInt Nq, const PetscInt batch_sz, const PetscInt num_grids, PetscInt a_numCells[], PetscInt a_species_offset[], PetscInt a_mat_offset[], PetscReal a_nu_alpha[], PetscReal a_nu_beta[], PetscReal a_invMass[], PetscReal a_invJ[], PetscReal a_x[], PetscReal a_y[], PetscReal a_z[], PetscReal a_w[], LandauStaticData *SData_d) 141d71ae5a4SJacob Faibussowitsch { 142e0eea495SMark PetscReal *BB, *DD; 143e8d2b73aSMark Adams PetscTabulation *Tf; 1448a6f2e61SMark Adams PetscInt dim; 1458a6f2e61SMark Adams PetscInt Nb = Nq, ip_offset[LANDAU_MAX_GRIDS + 1], ipf_offset[LANDAU_MAX_GRIDS + 1], elem_offset[LANDAU_MAX_GRIDS + 1], nip, IPf_sz, Nftot; 146e8d2b73aSMark Adams PetscDS prob; 147e0eea495SMark 148e0eea495SMark PetscFunctionBegin; 1499566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex, &dim)); 1509566063dSJacob Faibussowitsch PetscCall(DMGetDS(plex, &prob)); 15163a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 1529566063dSJacob Faibussowitsch PetscCall(PetscDSGetTabulation(prob, &Tf)); 1539371c9d4SSatish Balay BB = Tf[0]->T[0]; 1549371c9d4SSatish Balay DD = Tf[0]->T[1]; 1558a6f2e61SMark Adams ip_offset[0] = ipf_offset[0] = elem_offset[0] = 0; 1568a6f2e61SMark Adams nip = 0; 1578a6f2e61SMark Adams IPf_sz = 0; 1588a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 1598a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 1608a6f2e61SMark Adams elem_offset[grid + 1] = elem_offset[grid] + a_numCells[grid]; 1618a6f2e61SMark Adams nip += a_numCells[grid] * Nq; 1628a6f2e61SMark Adams ip_offset[grid + 1] = nip; 1638a6f2e61SMark Adams IPf_sz += Nq * nfloc * a_numCells[grid]; 1648a6f2e61SMark Adams ipf_offset[grid + 1] = IPf_sz; 1658a6f2e61SMark Adams } 1668a6f2e61SMark Adams Nftot = a_species_offset[num_grids]; 1679566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 168e8d2b73aSMark Adams { 1698a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_alpha(a_nu_alpha, Nftot); 1708a6f2e61SMark Adams auto alpha = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("alpha", Nftot); 171e8d2b73aSMark Adams SData_d->alpha = static_cast<void *>(alpha); 1728a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_beta(a_nu_beta, Nftot); 1738a6f2e61SMark Adams auto beta = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("beta", Nftot); 174e8d2b73aSMark Adams SData_d->beta = static_cast<void *>(beta); 1758a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invMass(a_invMass, Nftot); 1768a6f2e61SMark Adams auto invMass = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invMass", Nftot); 177e8d2b73aSMark Adams SData_d->invMass = static_cast<void *>(invMass); 178e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_BB(BB, Nq * Nb); 179e8d2b73aSMark Adams auto B = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("B", Nq * Nb); 180e8d2b73aSMark Adams SData_d->B = static_cast<void *>(B); 181e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_DD(DD, Nq * Nb * dim); 182e8d2b73aSMark Adams auto D = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("D", Nq * Nb * dim); 183e8d2b73aSMark Adams SData_d->D = static_cast<void *>(D); 184e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_invJ(a_invJ, nip * dim * dim); 185e8d2b73aSMark Adams auto invJ = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("invJ", nip * dim * dim); 186e8d2b73aSMark Adams SData_d->invJ = static_cast<void *>(invJ); 187e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_x(a_x, nip); 188e8d2b73aSMark Adams auto x = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("x", nip); 189e8d2b73aSMark Adams SData_d->x = static_cast<void *>(x); 190e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_y(a_y, nip); 191e8d2b73aSMark Adams auto y = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("y", nip); 192e8d2b73aSMark Adams SData_d->y = static_cast<void *>(y); 193e8d2b73aSMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_w(a_w, nip); 194e8d2b73aSMark Adams auto w = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("w", nip); 195e8d2b73aSMark Adams SData_d->w = static_cast<void *>(w); 196e8d2b73aSMark Adams 197e8d2b73aSMark Adams Kokkos::deep_copy(*alpha, h_alpha); 198e8d2b73aSMark Adams Kokkos::deep_copy(*beta, h_beta); 199e8d2b73aSMark Adams Kokkos::deep_copy(*invMass, h_invMass); 200e8d2b73aSMark Adams Kokkos::deep_copy(*B, h_BB); 201e8d2b73aSMark Adams Kokkos::deep_copy(*D, h_DD); 202e8d2b73aSMark Adams Kokkos::deep_copy(*invJ, h_invJ); 203e8d2b73aSMark Adams Kokkos::deep_copy(*x, h_x); 204e8d2b73aSMark Adams Kokkos::deep_copy(*y, h_y); 205e8d2b73aSMark Adams Kokkos::deep_copy(*w, h_w); 206e8d2b73aSMark Adams 2078a6f2e61SMark Adams if (dim == 3) { 208984ed092SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_z(a_z, nip); 2098a6f2e61SMark Adams auto z = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("z", nip); 2108a6f2e61SMark Adams SData_d->z = static_cast<void *>(z); 2118a6f2e61SMark Adams Kokkos::deep_copy(*z, h_z); 2128a6f2e61SMark Adams } else SData_d->z = NULL; 2138a6f2e61SMark Adams 2148a6f2e61SMark Adams // 2158a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_NCells(a_numCells, num_grids); 2168a6f2e61SMark Adams auto nc = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("NCells", num_grids); 2178a6f2e61SMark Adams SData_d->NCells = static_cast<void *>(nc); 2188a6f2e61SMark Adams Kokkos::deep_copy(*nc, h_NCells); 2198a6f2e61SMark Adams 2208a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_species_offset(a_species_offset, num_grids + 1); 2218a6f2e61SMark Adams auto soff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("species_offset", num_grids + 1); 2228a6f2e61SMark Adams SData_d->species_offset = static_cast<void *>(soff); 2238a6f2e61SMark Adams Kokkos::deep_copy(*soff, h_species_offset); 2248a6f2e61SMark Adams 2258a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_mat_offset(a_mat_offset, num_grids + 1); 2268a6f2e61SMark Adams auto moff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("mat_offset", num_grids + 1); 2278a6f2e61SMark Adams SData_d->mat_offset = static_cast<void *>(moff); 2288a6f2e61SMark Adams Kokkos::deep_copy(*moff, h_mat_offset); 2298a6f2e61SMark Adams 2308a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ip_offset(ip_offset, num_grids + 1); 2318a6f2e61SMark Adams auto ipoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ip_offset", num_grids + 1); 2328a6f2e61SMark Adams SData_d->ip_offset = static_cast<void *>(ipoff); 2338a6f2e61SMark Adams Kokkos::deep_copy(*ipoff, h_ip_offset); 2348a6f2e61SMark Adams 2358a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_elem_offset(elem_offset, num_grids + 1); 2368a6f2e61SMark Adams auto eoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("elem_offset", num_grids + 1); 2378a6f2e61SMark Adams SData_d->elem_offset = static_cast<void *>(eoff); 2388a6f2e61SMark Adams Kokkos::deep_copy(*eoff, h_elem_offset); 2398a6f2e61SMark Adams 2408a6f2e61SMark Adams const Kokkos::View<PetscInt *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_ipf_offset(ipf_offset, num_grids + 1); 2418a6f2e61SMark Adams auto ipfoff = new Kokkos::View<PetscInt *, Kokkos::LayoutLeft>("ipf_offset", num_grids + 1); 2428a6f2e61SMark Adams SData_d->ipf_offset = static_cast<void *>(ipfoff); 2438a6f2e61SMark Adams Kokkos::deep_copy(*ipfoff, h_ipf_offset); 2448a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 2458fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutLeft>("fdf", batch_sz, dim + 1, IPf_sz); 2468a6f2e61SMark Adams #else 2478fdabdddSMark Adams auto ipfdf_data = new Kokkos::View<PetscReal ***, Kokkos::LayoutRight>("fdf", batch_sz, dim + 1, IPf_sz); 2488a6f2e61SMark Adams #endif 2498a6f2e61SMark Adams SData_d->ipfdf_data = static_cast<void *>(ipfdf_data); 2508fdabdddSMark Adams auto Eq_m = new Kokkos::View<PetscReal *, Kokkos::LayoutLeft>("Eq_m", Nftot); // allocate but do not set, same for whole batch 251e8d2b73aSMark Adams SData_d->Eq_m = static_cast<void *>(Eq_m); 252cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_offsets((LandauIdx *)SData_d->coo_elem_offsets, SData_d->coo_n_cellsTot + 1); 253cada7fc7SMark Adams auto coo_elem_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot + 1); 254cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_fullNb((LandauIdx *)SData_d->coo_elem_fullNb, SData_d->coo_n_cellsTot); 255cada7fc7SMark Adams auto coo_elem_fullNb = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_offsets", SData_d->coo_n_cellsTot); 256cada7fc7SMark Adams const Kokkos::View<LandauIdx *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_coo_elem_point_offsets((LandauIdx *)SData_d->coo_elem_point_offsets, SData_d->coo_n_cellsTot * (LANDAU_MAX_NQ + 1)); 257cada7fc7SMark Adams auto coo_elem_point_offsets = new Kokkos::View<LandauIdx *, Kokkos::LayoutLeft>("coo_elem_point_offsets", SData_d->coo_n_cellsTot * (LANDAU_MAX_NQ + 1)); 258bfc784b7SMark Adams // assign & copy 259bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_offsets, h_coo_elem_offsets); 260bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_fullNb, h_coo_elem_fullNb); 261bfc784b7SMark Adams Kokkos::deep_copy(*coo_elem_point_offsets, h_coo_elem_point_offsets); 262bfc784b7SMark Adams // need to free this now and use pointer space 2639566063dSJacob Faibussowitsch PetscCall(PetscFree3(SData_d->coo_elem_offsets, SData_d->coo_elem_fullNb, SData_d->coo_elem_point_offsets)); 264cada7fc7SMark Adams SData_d->coo_elem_offsets = static_cast<void *>(coo_elem_offsets); 265cada7fc7SMark Adams SData_d->coo_elem_fullNb = static_cast<void *>(coo_elem_fullNb); 266cada7fc7SMark Adams SData_d->coo_elem_point_offsets = static_cast<void *>(coo_elem_point_offsets); 267a31f6053SMark Adams auto coo_vals = new Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace>("coo_vals", SData_d->coo_size); 268a31f6053SMark Adams SData_d->coo_vals = static_cast<void *>(coo_vals); 269e8d2b73aSMark Adams } 2708a6f2e61SMark Adams SData_d->maps = NULL; // not used 271e8d2b73aSMark Adams PetscFunctionReturn(0); 272e8d2b73aSMark Adams } 273e8d2b73aSMark Adams 274d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosStaticDataClear(LandauStaticData *SData_d) 275d71ae5a4SJacob Faibussowitsch { 276e8d2b73aSMark Adams PetscFunctionBegin; 277e8d2b73aSMark Adams if (SData_d->alpha) { 278e8d2b73aSMark Adams auto alpha = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); 279e8d2b73aSMark Adams delete alpha; 2808a6f2e61SMark Adams SData_d->alpha = NULL; 281e8d2b73aSMark Adams auto beta = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 282e8d2b73aSMark Adams delete beta; 283e8d2b73aSMark Adams auto invMass = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 284e8d2b73aSMark Adams delete invMass; 285e8d2b73aSMark Adams auto B = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 286e8d2b73aSMark Adams delete B; 287e8d2b73aSMark Adams auto D = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 288e8d2b73aSMark Adams delete D; 289e8d2b73aSMark Adams auto invJ = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); 290e8d2b73aSMark Adams delete invJ; 291e8d2b73aSMark Adams auto x = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); 292e8d2b73aSMark Adams delete x; 293e8d2b73aSMark Adams auto y = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); 294e8d2b73aSMark Adams delete y; 2958a6f2e61SMark Adams if (SData_d->z) { 296e8d2b73aSMark Adams auto z = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); 297e8d2b73aSMark Adams delete z; 2988a6f2e61SMark Adams } 2998a6f2e61SMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, no copy 3008fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 3018a6f2e61SMark Adams #else 3028fdabdddSMark Adams auto z = static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 3038a6f2e61SMark Adams #endif 3048a6f2e61SMark Adams delete z; 305e8d2b73aSMark Adams auto w = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); 306e8d2b73aSMark Adams delete w; 307e8d2b73aSMark Adams auto Eq_m = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); 308e8d2b73aSMark Adams delete Eq_m; 3098a6f2e61SMark Adams // offset 3108a6f2e61SMark Adams auto nc = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 3118a6f2e61SMark Adams delete nc; 3128a6f2e61SMark Adams auto soff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 3138a6f2e61SMark Adams delete soff; 3148a6f2e61SMark Adams auto moff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 3158a6f2e61SMark Adams delete moff; 3168a6f2e61SMark Adams auto ipoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 3178a6f2e61SMark Adams delete ipoff; 3188a6f2e61SMark Adams auto eoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 3198a6f2e61SMark Adams delete eoff; 3208a6f2e61SMark Adams auto ipfoff = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 3218a6f2e61SMark Adams delete ipfoff; 322bfc784b7SMark Adams auto coo_elem_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_offsets); 323bfc784b7SMark Adams delete coo_elem_offsets; 324bfc784b7SMark Adams auto coo_elem_fullNb = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_fullNb); 325bfc784b7SMark Adams delete coo_elem_fullNb; 326cada7fc7SMark Adams auto coo_elem_point_offsets = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>((void *)SData_d->coo_elem_point_offsets); 327bfc784b7SMark Adams delete coo_elem_point_offsets; 328bfc784b7SMark Adams SData_d->coo_elem_offsets = NULL; 329bfc784b7SMark Adams SData_d->coo_elem_point_offsets = NULL; 330bfc784b7SMark Adams SData_d->coo_elem_fullNb = NULL; 331a31f6053SMark Adams auto coo_vals = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight, Kokkos::DefaultExecutionSpace> *>((void *)SData_d->coo_vals); 332a31f6053SMark Adams delete coo_vals; 333af0767daSMark Adams } 334e8d2b73aSMark Adams PetscFunctionReturn(0); 335e8d2b73aSMark Adams } 336e8d2b73aSMark Adams 33759118022SMark Adams #define KOKKOS_SHARED_LEVEL 0 // 0 is shared, 1 is global 33859118022SMark Adams 3398a6f2e61SMark Adams KOKKOS_INLINE_FUNCTION 340d71ae5a4SJacob Faibussowitsch PetscErrorCode landau_mat_assemble(PetscSplitCSRDataStructure d_mat, PetscScalar *coo_vals, const PetscScalar Aij, const PetscInt f, const PetscInt g, const PetscInt Nb, PetscInt moffset, const PetscInt elem, const PetscInt fieldA, const P4estVertexMaps *d_maps, const LandauIdx coo_elem_offsets[], const LandauIdx coo_elem_fullNb[], const LandauIdx (*coo_elem_point_offsets)[LANDAU_MAX_NQ + 1], const PetscInt glb_elem_idx, const PetscInt bid_coo_sz_batch) 341d71ae5a4SJacob Faibussowitsch { 342ad4b5651SMark Adams PetscInt idx, q, nr, nc, d; 3438a6f2e61SMark Adams const LandauIdx *const Idxs = &d_maps->gIdx[elem][fieldA][0]; 344bfc784b7SMark Adams PetscScalar row_scale[LANDAU_MAX_Q_FACE] = {0}, col_scale[LANDAU_MAX_Q_FACE] = {0}; 345bfc784b7SMark Adams if (coo_vals) { // mirror (i,j) in CreateStaticGPUData 346bfc784b7SMark Adams const int fullNb = coo_elem_fullNb[glb_elem_idx], fullNb2 = fullNb * fullNb; 347bfc784b7SMark Adams idx = Idxs[f]; 348bfc784b7SMark Adams if (idx >= 0) { 349bfc784b7SMark Adams nr = 1; 350bfc784b7SMark Adams row_scale[0] = 1.; 351bfc784b7SMark Adams } else { 352bfc784b7SMark Adams idx = -idx - 1; 353bfc784b7SMark Adams for (q = 0, nr = 0; q < d_maps->num_face; q++, nr++) { 354bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 355bfc784b7SMark Adams row_scale[q] = d_maps->c_maps[idx][q].scale; 356bfc784b7SMark Adams } 357bfc784b7SMark Adams } 358bfc784b7SMark Adams idx = Idxs[g]; 359bfc784b7SMark Adams if (idx >= 0) { 360bfc784b7SMark Adams nc = 1; 361bfc784b7SMark Adams col_scale[0] = 1.; 362bfc784b7SMark Adams } else { 363bfc784b7SMark Adams idx = -idx - 1; 364bfc784b7SMark Adams nc = d_maps->num_face; 365bfc784b7SMark Adams for (q = 0, nc = 0; q < d_maps->num_face; q++, nc++) { 366bfc784b7SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 367bfc784b7SMark Adams col_scale[q] = d_maps->c_maps[idx][q].scale; 368bfc784b7SMark Adams } 369bfc784b7SMark Adams } 370cada7fc7SMark Adams const int idx0 = bid_coo_sz_batch + coo_elem_offsets[glb_elem_idx] + fieldA * fullNb2 + fullNb * coo_elem_point_offsets[glb_elem_idx][f] + nr * coo_elem_point_offsets[glb_elem_idx][g]; 371bfc784b7SMark Adams for (int q = 0, idx2 = idx0; q < nr; q++) { 372ad540459SPierre Jolivet for (int d = 0; d < nc; d++, idx2++) coo_vals[idx2] = row_scale[q] * col_scale[d] * Aij; 373bfc784b7SMark Adams } 374bfc784b7SMark Adams } else { 375bfc784b7SMark Adams PetscScalar vals[LANDAU_MAX_Q_FACE * LANDAU_MAX_Q_FACE] = {0}; 376ad4b5651SMark Adams PetscInt rows[LANDAU_MAX_Q_FACE], cols[LANDAU_MAX_Q_FACE]; 377ad4b5651SMark Adams idx = Idxs[f]; 3788a6f2e61SMark Adams if (idx >= 0) { 3798a6f2e61SMark Adams nr = 1; 380ad4b5651SMark Adams rows[0] = idx; 381ad4b5651SMark Adams row_scale[0] = 1.; 3828a6f2e61SMark Adams } else { 383ad4b5651SMark Adams idx = -idx - 1; 384ad4b5651SMark Adams for (q = 0, nr = 0; q < d_maps->num_face; q++, nr++) { 385ad4b5651SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 386ad4b5651SMark Adams rows[q] = d_maps->c_maps[idx][q].gid; 387ad4b5651SMark Adams row_scale[q] = d_maps->c_maps[idx][q].scale; 3888a6f2e61SMark Adams } 389ad4b5651SMark Adams } 390ad4b5651SMark Adams idx = Idxs[g]; 3918a6f2e61SMark Adams if (idx >= 0) { 3928a6f2e61SMark Adams nc = 1; 393ad4b5651SMark Adams cols[0] = idx; 394ad4b5651SMark Adams col_scale[0] = 1.; 3958a6f2e61SMark Adams } else { 396ad4b5651SMark Adams idx = -idx - 1; 397ad4b5651SMark Adams for (q = 0, nc = 0; q < d_maps->num_face; q++, nc++) { 398ad4b5651SMark Adams if (d_maps->c_maps[idx][q].gid < 0) break; 399ad4b5651SMark Adams cols[q] = d_maps->c_maps[idx][q].gid; 400ad4b5651SMark Adams col_scale[q] = d_maps->c_maps[idx][q].scale; 4018a6f2e61SMark Adams } 402ad4b5651SMark Adams } 403bfc784b7SMark Adams 404ad4b5651SMark Adams for (q = 0; q < nr; q++) rows[q] = rows[q] + moffset; 405ad4b5651SMark Adams for (q = 0; q < nc; q++) cols[q] = cols[q] + moffset; 4068a6f2e61SMark Adams for (q = 0; q < nr; q++) { 407ad540459SPierre Jolivet for (d = 0; d < nc; d++) vals[q * nc + d] = row_scale[q] * col_scale[d] * Aij; 4088a6f2e61SMark Adams } 409ad4b5651SMark Adams MatSetValuesDevice(d_mat, nr, rows, nc, cols, vals, ADD_VALUES); 410bfc784b7SMark Adams } 4118a6f2e61SMark Adams return 0; 4128a6f2e61SMark Adams } 4138a6f2e61SMark Adams 414d71ae5a4SJacob Faibussowitsch PetscErrorCode LandauKokkosJacobian(DM plex[], const PetscInt Nq, const PetscInt batch_sz, const PetscInt num_grids, const PetscInt a_numCells[], PetscReal a_Eq_m[], PetscScalar a_elem_closure[], const PetscScalar a_xarray[], const LandauStaticData *SData_d, const PetscReal shift, const PetscLogEvent events[], const PetscInt a_mat_offset[], const PetscInt a_species_offset[], Mat subJ[], Mat JacP) 415d71ae5a4SJacob Faibussowitsch { 416e8d2b73aSMark Adams using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 41719be780dSMark Adams using real2_scr_t = Kokkos::View<PetscScalar **, Kokkos::LayoutRight, scr_mem_t>; 418e8d2b73aSMark Adams using g2_scr_t = Kokkos::View<PetscReal ***, Kokkos::LayoutRight, scr_mem_t>; 419e8d2b73aSMark Adams using g3_scr_t = Kokkos::View<PetscReal ****, Kokkos::LayoutRight, scr_mem_t>; 4208fdabdddSMark Adams PetscInt Nb = Nq, dim, num_cells_max, Nf_max, num_cells_batch; 421dbabbaf5SMark Adams int nfaces = 0, vector_size = 512 / Nq; 422e8d2b73aSMark Adams LandauCtx *ctx; 423e8d2b73aSMark Adams PetscReal *d_Eq_m = NULL; 4248a6f2e61SMark Adams PetscScalar *d_vertex_f = NULL; 4258a6f2e61SMark Adams P4estVertexMaps *maps[LANDAU_MAX_GRIDS]; // this gets captured 4268a6f2e61SMark Adams PetscSplitCSRDataStructure d_mat; 4278fdabdddSMark Adams PetscContainer container; 428bd08a171SMark Adams const int conc = Kokkos::DefaultExecutionSpace().concurrency(), openmp = !!(conc < 1000), team_size = (openmp == 0) ? Nq : 1; 429bfc784b7SMark Adams const PetscInt coo_sz_batch = SData_d->coo_size / batch_sz; // capture 430e8d2b73aSMark Adams auto d_alpha_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->alpha); //static data 431e8d2b73aSMark Adams const PetscReal *d_alpha = d_alpha_k->data(); 4328a6f2e61SMark Adams const PetscInt Nftot = d_alpha_k->size(); // total number of species 433e8d2b73aSMark Adams auto d_beta_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->beta); 434e8d2b73aSMark Adams const PetscReal *d_beta = d_beta_k->data(); 435e8d2b73aSMark Adams auto d_invMass_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invMass); 436e8d2b73aSMark Adams const PetscReal *d_invMass = d_invMass_k->data(); 437e8d2b73aSMark Adams auto d_B_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->B); 438e8d2b73aSMark Adams const PetscReal *d_BB = d_B_k->data(); 439e8d2b73aSMark Adams auto d_D_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->D); 440e8d2b73aSMark Adams const PetscReal *d_DD = d_D_k->data(); 441e8d2b73aSMark Adams auto d_invJ_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->invJ); // use Kokkos vector in kernels 442e8d2b73aSMark Adams auto d_x_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->x); //static data 443e8d2b73aSMark Adams const PetscReal *d_x = d_x_k->data(); 444e8d2b73aSMark Adams auto d_y_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->y); //static data 445e8d2b73aSMark Adams const PetscReal *d_y = d_y_k->data(); 446e8d2b73aSMark Adams auto d_z_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->z); //static data 4478a6f2e61SMark Adams const PetscReal *d_z = (LANDAU_DIM == 3) ? d_z_k->data() : NULL; 4488a6f2e61SMark Adams auto d_w_k = *static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->w); //static data 4498a6f2e61SMark Adams const PetscReal *d_w = d_w_k.data(); 4508fdabdddSMark Adams // grid offsets - single vertex grid data 4518a6f2e61SMark Adams auto d_numCells_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->NCells); 4528a6f2e61SMark Adams const PetscInt *d_numCells = d_numCells_k->data(); 4538a6f2e61SMark Adams auto d_species_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->species_offset); 4548a6f2e61SMark Adams const PetscInt *d_species_offset = d_species_offset_k->data(); 4558a6f2e61SMark Adams auto d_mat_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->mat_offset); 4568a6f2e61SMark Adams const PetscInt *d_mat_offset = d_mat_offset_k->data(); 4578a6f2e61SMark Adams auto d_ip_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ip_offset); 4588a6f2e61SMark Adams const PetscInt *d_ip_offset = d_ip_offset_k->data(); 4598a6f2e61SMark Adams auto d_ipf_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->ipf_offset); 4608a6f2e61SMark Adams const PetscInt *d_ipf_offset = d_ipf_offset_k->data(); 4618a6f2e61SMark Adams auto d_elem_offset_k = static_cast<Kokkos::View<PetscInt *, Kokkos::LayoutLeft> *>(SData_d->elem_offset); 4628a6f2e61SMark Adams const PetscInt *d_elem_offset = d_elem_offset_k->data(); 4638fdabdddSMark Adams #if defined(LANDAU_LAYOUT_LEFT) // preallocate dynamic data, including batched vertices 4648fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutLeft> *>(SData_d->ipfdf_data); 4658a6f2e61SMark Adams #else 4668fdabdddSMark Adams Kokkos::View<PetscReal ***, Kokkos::LayoutRight> d_fdf_k = *static_cast<Kokkos::View<PetscReal ***, Kokkos::LayoutRight> *>(SData_d->ipfdf_data); 4678a6f2e61SMark Adams #endif 4688fdabdddSMark Adams auto d_Eq_m_k = static_cast<Kokkos::View<PetscReal *, Kokkos::LayoutLeft> *>(SData_d->Eq_m); // static storage, dynamci data - E(t), copy later, single vertex 469bfc784b7SMark Adams // COO 470cada7fc7SMark Adams auto d_coo_elem_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_offsets); 471cada7fc7SMark Adams LandauIdx *d_coo_elem_offsets = (SData_d->coo_size == 0) ? NULL : d_coo_elem_offsets_k->data(); 472cada7fc7SMark Adams auto d_coo_elem_fullNb_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_fullNb); 473cada7fc7SMark Adams LandauIdx *d_coo_elem_fullNb = (SData_d->coo_size == 0) ? NULL : d_coo_elem_fullNb_k->data(); 474cada7fc7SMark Adams auto d_coo_elem_point_offsets_k = static_cast<Kokkos::View<LandauIdx *, Kokkos::LayoutLeft> *>(SData_d->coo_elem_point_offsets); 475cada7fc7SMark Adams LandauIdx(*d_coo_elem_point_offsets)[LANDAU_MAX_NQ + 1] = (SData_d->coo_size == 0) ? NULL : (LandauIdx(*)[LANDAU_MAX_NQ + 1]) d_coo_elem_point_offsets_k->data(); 476a31f6053SMark Adams auto d_coo_vals_k = static_cast<Kokkos::View<PetscScalar *, Kokkos::LayoutRight> *>(SData_d->coo_vals); 477a31f6053SMark Adams PetscScalar *d_coo_vals = (SData_d->coo_size == 0) ? NULL : d_coo_vals_k->data(); 4788fdabdddSMark Adams 479e8d2b73aSMark Adams PetscFunctionBegin; 480a31f6053SMark Adams while (vector_size & (vector_size - 1)) vector_size = vector_size & (vector_size - 1); 481dbabbaf5SMark Adams if (vector_size > 16) vector_size = 16; // printf("DEBUG\n"); 4829566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[3], 0, 0, 0, 0)); 4839566063dSJacob Faibussowitsch PetscCall(DMGetApplicationContext(plex[0], &ctx)); 48428b400f6SJacob Faibussowitsch PetscCheck(ctx, PETSC_COMM_SELF, PETSC_ERR_PLIB, "no context"); 4859566063dSJacob Faibussowitsch PetscCall(DMGetDimension(plex[0], &dim)); 48663a3b9bcSJacob Faibussowitsch PetscCheck(LANDAU_DIM == dim, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "dim %" PetscInt_FMT " != LANDAU_DIM %d", dim, LANDAU_DIM); 487a587d139SMark if (ctx->gpu_assembly) { 4889566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)JacP, "assembly_maps", (PetscObject *)&container)); 489bfc784b7SMark Adams if (container) { 490a587d139SMark P4estVertexMaps *h_maps = NULL; 4919566063dSJacob Faibussowitsch PetscCall(PetscContainerGetPointer(container, (void **)&h_maps)); 4928a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 4938a6f2e61SMark Adams if (h_maps[grid].d_self) { 4948a6f2e61SMark Adams maps[grid] = h_maps[grid].d_self; 4958a6f2e61SMark Adams nfaces = h_maps[grid].num_face; // nface=0 for CPU assembly 496a587d139SMark } else { 497a587d139SMark SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 498a587d139SMark } 4998a6f2e61SMark Adams } 500bfc784b7SMark Adams if (!d_coo_vals) { 501a587d139SMark // this does the setup the first time called 5029566063dSJacob Faibussowitsch PetscCall(MatKokkosGetDeviceMatWrite(JacP, &d_mat)); 503bfc784b7SMark Adams } else { 5048fdabdddSMark Adams d_mat = NULL; 505a587d139SMark } 506bfc784b7SMark Adams } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "GPU assembly but no metadata in container"); 507a587d139SMark } else { 5088a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) maps[grid] = NULL; 5098a6f2e61SMark Adams nfaces = 0; 5108fdabdddSMark Adams d_mat = NULL; 5118fdabdddSMark Adams container = NULL; 512a587d139SMark } 5138fdabdddSMark Adams num_cells_batch = Nf_max = num_cells_max = 0; 5148a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 5158a6f2e61SMark Adams int Nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 5168a6f2e61SMark Adams if (Nfloc > Nf_max) Nf_max = Nfloc; 5178a6f2e61SMark Adams if (a_numCells[grid] > num_cells_max) num_cells_max = a_numCells[grid]; 5188fdabdddSMark Adams num_cells_batch += a_numCells[grid]; // we don't have a host element offset here (but in ctx) 5198a6f2e61SMark Adams } 520d9008a5dSMark Adams const int elem_mat_num_cells_max_grid = container ? 0 : num_cells_max; 521bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 522bfbbad94Smarkadams4 const int totDim_max = Nf_max * Nq, elem_mat_size_max = totDim_max * totDim_max; 523a31f6053SMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight> d_elem_mats("element matrices", batch_sz, num_grids, elem_mat_num_cells_max_grid, elem_mat_size_max); // not used (cpu assembly) 524bfbbad94Smarkadams4 #endif 5258a6f2e61SMark Adams const Kokkos::View<PetscReal *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_Eq_m_k(a_Eq_m, Nftot); 5268a6f2e61SMark Adams if (a_elem_closure || a_xarray) { 527e8d2b73aSMark Adams Kokkos::deep_copy(*d_Eq_m_k, h_Eq_m_k); 528e8d2b73aSMark Adams d_Eq_m = d_Eq_m_k->data(); 5298a6f2e61SMark Adams } else d_Eq_m = NULL; 5309566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 5319566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[3], 0, 0, 0, 0)); 5328a6f2e61SMark Adams if (a_elem_closure || a_xarray) { // Jacobian, create f & df 5338a6f2e61SMark Adams Kokkos::View<PetscScalar *, Kokkos::LayoutLeft> *d_vertex_f_k = NULL; 5349566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[1], 0, 0, 0, 0)); 5358a6f2e61SMark Adams if (a_elem_closure) { 5368a6f2e61SMark Adams PetscInt closure_sz = 0; // argh, don't have this on the host!!! 5378a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 5388a6f2e61SMark Adams PetscInt nfloc = a_species_offset[grid + 1] - a_species_offset[grid]; 5398a6f2e61SMark Adams closure_sz += Nq * nfloc * a_numCells[grid]; 5408a6f2e61SMark Adams } 5418fdabdddSMark Adams closure_sz *= batch_sz; 5428a6f2e61SMark Adams d_vertex_f_k = new Kokkos::View<PetscScalar *, Kokkos::LayoutLeft>("closure", closure_sz); 5438a6f2e61SMark Adams const Kokkos::View<PetscScalar *, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged>> h_closure_k(a_elem_closure, closure_sz); // Vertex data for each element 5448a6f2e61SMark Adams Kokkos::deep_copy(*d_vertex_f_k, h_closure_k); 5458a6f2e61SMark Adams d_vertex_f = d_vertex_f_k->data(); 546af0767daSMark Adams } else { 5478a6f2e61SMark Adams d_vertex_f = (PetscScalar *)a_xarray; 548af0767daSMark Adams } 5499566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[1], 0, 0, 0, 0)); 5509566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[8], 0, 0, 0, 0)); 5519566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 55219be780dSMark Adams 55319be780dSMark Adams const int scr_bytes_fdf = real2_scr_t::shmem_size(Nf_max, Nb); 554dbabbaf5SMark Adams PetscCall(PetscInfo(plex[0], "df & f shared memory size: %d bytes in level, %d num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", scr_bytes_fdf, KOKKOS_SHARED_LEVEL, num_cells_batch * batch_sz, team_size, vector_size, nfaces, Nf_max)); 5559371c9d4SSatish Balay Kokkos::parallel_for( 5569371c9d4SSatish Balay "f, df", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, /* Kokkos::AUTO */ vector_size).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerTeam(scr_bytes_fdf)), KOKKOS_LAMBDA(const team_member team) { 5578fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem, IPf_sz_glb = d_ipf_offset[num_grids]; 5588a6f2e61SMark Adams // find my grid 5598fdabdddSMark Adams PetscInt grid = 0; 5608fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 5618a6f2e61SMark Adams { 5628fdabdddSMark Adams const PetscInt loc_nip = d_numCells[grid] * Nq, loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 5638fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 56419be780dSMark Adams { 56519be780dSMark Adams real2_scr_t s_coef_k(team.team_scratch(KOKKOS_SHARED_LEVEL), Nf_max, Nb); 56619be780dSMark Adams PetscScalar *coef; 5678fdabdddSMark Adams const PetscReal *invJe = &d_invJ_k((d_ip_offset[grid] + loc_elem * Nq) * dim * dim); 568a587d139SMark // un pack IPData 5698a6f2e61SMark Adams if (!maps[grid]) { 5708fdabdddSMark Adams coef = &d_vertex_f[b_id * IPf_sz_glb + d_ipf_offset[grid] + loc_elem * Nb * loc_Nf]; // closure and IP indexing are the same 571af0767daSMark Adams } else { 57219be780dSMark Adams coef = s_coef_k.data(); 57319be780dSMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, (int)loc_Nf), [=](int f) { 57419be780dSMark Adams //for (int f = 0; f < loc_Nf; ++f) { 57519be780dSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)Nb), [=](int b) { 57619be780dSMark Adams //for (int b = 0; b < Nb; ++b) { 57719be780dSMark Adams LandauIdx idx = maps[grid]->gIdx[loc_elem][f][b]; 578af0767daSMark Adams if (idx >= 0) { 57919be780dSMark Adams coef[f * Nb + b] = d_vertex_f[idx + moffset]; // xarray data, not IP, need raw array to deal with CPU assemble case (not used) 580af0767daSMark Adams } else { 581af0767daSMark Adams idx = -idx - 1; 58219be780dSMark Adams coef[f * Nb + b] = 0; 5838a6f2e61SMark Adams for (int q = 0; q < maps[grid]->num_face; q++) { 5848a6f2e61SMark Adams PetscInt id = maps[grid]->c_maps[idx][q].gid; 5858a6f2e61SMark Adams PetscScalar scale = maps[grid]->c_maps[idx][q].scale; 586f26f10aaSMark Adams if (id >= 0) coef[f * Nb + b] += scale * d_vertex_f[id + moffset]; 587af0767daSMark Adams } 588af0767daSMark Adams } 58919be780dSMark Adams }); 59019be780dSMark Adams }); 591af0767daSMark Adams } 59219be780dSMark Adams team.team_barrier(); 593a587d139SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 5948fdabdddSMark Adams const PetscReal *const invJ = &invJe[myQi * dim * dim]; // b_elem_idx: batch element index 595a587d139SMark const PetscReal *Bq = &d_BB[myQi * Nb], *Dq = &d_DD[myQi * Nb * dim]; 5968fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, (int)loc_Nf), [=](int f) { 597a587d139SMark PetscInt b, e, d; 598e8d2b73aSMark Adams PetscReal refSpaceDer[LANDAU_DIM]; 5998fdabdddSMark Adams const PetscInt idx = d_ipf_offset[grid] + f * loc_nip + loc_elem * Nq + myQi; 6008fdabdddSMark Adams d_fdf_k(b_id, 0, idx) = 0.0; 601a587d139SMark for (d = 0; d < LANDAU_DIM; ++d) refSpaceDer[d] = 0.0; 602a587d139SMark for (b = 0; b < Nb; ++b) { 60319be780dSMark Adams d_fdf_k(b_id, 0, idx) += Bq[b] * PetscRealPart(coef[f * Nb + b]); 60419be780dSMark Adams for (d = 0; d < dim; ++d) refSpaceDer[d] += Dq[b * dim + d] * PetscRealPart(coef[f * Nb + b]); 605a587d139SMark } 606a587d139SMark for (d = 0; d < dim; ++d) { 607ad540459SPierre Jolivet for (e = 0, d_fdf_k(b_id, d + 1, idx) = 0.0; e < dim; ++e) d_fdf_k(b_id, d + 1, idx) += invJ[e * dim + d] * refSpaceDer[e]; 608a587d139SMark } 6098a6f2e61SMark Adams }); // f 6108a6f2e61SMark Adams }); // myQi 6118a6f2e61SMark Adams } 61219be780dSMark Adams team.team_barrier(); 61319be780dSMark Adams } // 'grid' scope 6148a6f2e61SMark Adams }); // global elems - fdf 6158a6f2e61SMark Adams Kokkos::fence(); 616bfbbad94Smarkadams4 PetscCall(PetscLogGpuTimeEnd()); 6179566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[8], 0, 0, 0, 0)); 618e6118d12SMark Adams // Jacobian 619d9008a5dSMark Adams int maximum_shared_mem_size = 64000; 620a16fd2c9SJacob Faibussowitsch PetscDevice device; 621a16fd2c9SJacob Faibussowitsch 622a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetDefault_Internal(&device)); 623a16fd2c9SJacob Faibussowitsch PetscCall(PetscDeviceGetAttribute(device, PETSC_DEVICE_ATTR_SIZE_T_SHARED_MEM_PER_BLOCK, &maximum_shared_mem_size)); 624d9008a5dSMark Adams const int jac_scr_bytes = 2 * (g2_scr_t::shmem_size(dim, Nf_max, Nq) + g3_scr_t::shmem_size(dim, dim, Nf_max, Nq)); 625d9008a5dSMark Adams const int jac_shared_level = (jac_scr_bytes > maximum_shared_mem_size) ? 1 : KOKKOS_SHARED_LEVEL; 626d71ae5a4SJacob Faibussowitsch auto jac_lambda = KOKKOS_LAMBDA(const team_member team) 627d71ae5a4SJacob Faibussowitsch { 6288fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 6298a6f2e61SMark Adams // find my grid 6308fdabdddSMark Adams PetscInt grid = 0; 6318fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 6328a6f2e61SMark Adams { 63319be780dSMark Adams const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid]; 6348fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 635bfbbad94Smarkadams4 const PetscInt f_off = d_species_offset[grid]; 636bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 637bfbbad94Smarkadams4 const PetscInt totDim = loc_Nf * Nq; 638bfbbad94Smarkadams4 #endif 639d9008a5dSMark Adams g2_scr_t g2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 640d9008a5dSMark Adams g3_scr_t g3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 641d9008a5dSMark Adams g2_scr_t gg2(team.team_scratch(jac_shared_level), dim, loc_Nf, Nq); 642d9008a5dSMark Adams g3_scr_t gg3(team.team_scratch(jac_shared_level), dim, dim, loc_Nf, Nq); 643e0eea495SMark // get g2[] & g3[] 644e0eea495SMark Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nq), [=](int myQi) { 645e0eea495SMark using Kokkos::parallel_reduce; 6468fdabdddSMark Adams const PetscInt jpidx_glb = d_ip_offset[grid] + loc_elem * Nq + myQi; 6478fdabdddSMark Adams const PetscReal *invJ = &d_invJ_k(jpidx_glb * dim * dim); 6488fdabdddSMark Adams const PetscReal vj[3] = {d_x[jpidx_glb], d_y[jpidx_glb], d_z ? d_z[jpidx_glb] : 0}, wj = d_w[jpidx_glb]; 6498a6f2e61SMark Adams landau_inner_red::TensorValueType gg_temp; // reduce on part of gg2 and g33 for IP jpidx_g 6509371c9d4SSatish Balay Kokkos::parallel_reduce( 6519371c9d4SSatish Balay Kokkos::ThreadVectorRange(team, (int)d_ip_offset[num_grids]), 6529371c9d4SSatish Balay [=](const int &ipidx, landau_inner_red::TensorValueType &ggg) { 653e8d2b73aSMark Adams const PetscReal wi = d_w[ipidx], x = d_x[ipidx], y = d_y[ipidx]; 65452cdd6eaSMark PetscReal temp1[3] = {0, 0, 0}, temp2 = 0; 6558fdabdddSMark Adams PetscInt fieldA, d2, d3, f_off_r, grid_r, ipidx_g, nip_loc_r, loc_Nf_r; 656e0eea495SMark #if LANDAU_DIM == 2 6578a6f2e61SMark Adams PetscReal Ud[2][2], Uk[2][2], mask = (PetscAbs(vj[0] - x) < 100 * PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1] - y) < 100 * PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6588a6f2e61SMark Adams LandauTensor2D(vj, x, y, Ud, Uk, mask); 65952cdd6eaSMark #else 6607620afa1SMark Adams PetscReal U[3][3], z = d_z[ipidx], mask = (PetscAbs(vj[0]-x) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[1]-y) < 100*PETSC_SQRT_MACHINE_EPSILON && PetscAbs(vj[2]-z) < 100*PETSC_SQRT_MACHINE_EPSILON) ? 0. : 1.; 6618a6f2e61SMark Adams LandauTensor3D(vj, x, y, z, U, mask); 66252cdd6eaSMark #endif 6638a6f2e61SMark Adams grid_r = 0; 6648a6f2e61SMark Adams while (ipidx >= d_ip_offset[grid_r + 1]) grid_r++; // yuck search for grid 6658a6f2e61SMark Adams f_off_r = d_species_offset[grid_r]; 6668a6f2e61SMark Adams ipidx_g = ipidx - d_ip_offset[grid_r]; 6678a6f2e61SMark Adams nip_loc_r = d_numCells[grid_r] * Nq; 6688fdabdddSMark Adams loc_Nf_r = d_species_offset[grid_r + 1] - d_species_offset[grid_r]; 6698fdabdddSMark Adams for (fieldA = 0; fieldA < loc_Nf_r; ++fieldA) { 6708fdabdddSMark Adams const PetscInt idx = d_ipf_offset[grid_r] + fieldA * nip_loc_r + ipidx_g; 6718fdabdddSMark Adams temp1[0] += d_fdf_k(b_id, 1, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 6728fdabdddSMark Adams temp1[1] += d_fdf_k(b_id, 2, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 67352cdd6eaSMark #if LANDAU_DIM == 3 6748fdabdddSMark Adams temp1[2] += d_fdf_k(b_id, 3, idx) * d_beta[fieldA + f_off_r] * d_invMass[fieldA + f_off_r]; 67552cdd6eaSMark #endif 6768fdabdddSMark Adams temp2 += d_fdf_k(b_id, 0, idx) * d_beta[fieldA + f_off_r]; 67752cdd6eaSMark } 67852cdd6eaSMark temp1[0] *= wi; 67952cdd6eaSMark temp1[1] *= wi; 68052cdd6eaSMark #if LANDAU_DIM == 3 68152cdd6eaSMark temp1[2] *= wi; 68252cdd6eaSMark #endif 68352cdd6eaSMark temp2 *= wi; 68452cdd6eaSMark #if LANDAU_DIM == 2 68552cdd6eaSMark for (d2 = 0; d2 < 2; d2++) { 686e0eea495SMark for (d3 = 0; d3 < 2; ++d3) { 687e0eea495SMark /* K = U * grad(f): g2=e: i,A */ 68852cdd6eaSMark ggg.gg2[d2] += Uk[d2][d3] * temp1[d3]; 689e0eea495SMark /* D = -U * (I \kron (fx)): g3=f: i,j,A */ 69052cdd6eaSMark ggg.gg3[d2][d3] += Ud[d2][d3] * temp2; 691e0eea495SMark } 692e0eea495SMark } 693e0eea495SMark #else 694e0eea495SMark for (d2 = 0; d2 < 3; ++d2) { 695e0eea495SMark for (d3 = 0; d3 < 3; ++d3) { 696e0eea495SMark /* K = U * grad(f): g2 = e: i,A */ 69752cdd6eaSMark ggg.gg2[d2] += U[d2][d3]*temp1[d3]; 698e0eea495SMark /* D = -U * (I \kron (fx)): g3 = f: i,j,A */ 69952cdd6eaSMark ggg.gg3[d2][d3] += U[d2][d3]*temp2; 700e0eea495SMark } 701e0eea495SMark } 702e0eea495SMark #endif 7039371c9d4SSatish Balay }, 7049371c9d4SSatish Balay Kokkos::Sum<landau_inner_red::TensorValueType>(gg_temp)); 70552cdd6eaSMark // add alpha and put in gg2/3 7068fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { 70752cdd6eaSMark PetscInt d2, d3; 70852cdd6eaSMark for (d2 = 0; d2 < dim; d2++) { 7098a6f2e61SMark Adams gg2(d2, fieldA, myQi) = gg_temp.gg2[d2] * d_alpha[fieldA + f_off]; 710ad540459SPierre Jolivet for (d3 = 0; d3 < dim; d3++) gg3(d2, d3, fieldA, myQi) = -gg_temp.gg3[d2][d3] * d_alpha[fieldA + f_off] * d_invMass[fieldA + f_off]; 71152cdd6eaSMark } 712e0eea495SMark }); 71352cdd6eaSMark /* add electric field term once per IP */ 7149371c9d4SSatish Balay Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [&](const int &fieldA) { gg2(dim - 1, fieldA, myQi) += d_Eq_m[fieldA + f_off]; }); 7158fdabdddSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, (int)loc_Nf), [=](const int &fieldA) { 716e0eea495SMark int d, d2, d3, dp; 717e0eea495SMark /* Jacobian transform - g2, g3 - per thread (2D) */ 718e0eea495SMark for (d = 0; d < dim; ++d) { 71952cdd6eaSMark g2(d, fieldA, myQi) = 0; 720e0eea495SMark for (d2 = 0; d2 < dim; ++d2) { 7218fdabdddSMark Adams g2(d, fieldA, myQi) += invJ[d * dim + d2] * gg2(d2, fieldA, myQi); 72252cdd6eaSMark g3(d, d2, fieldA, myQi) = 0; 723e0eea495SMark for (d3 = 0; d3 < dim; ++d3) { 724ad540459SPierre Jolivet for (dp = 0; dp < dim; ++dp) g3(d, d2, fieldA, myQi) += invJ[d * dim + d3] * gg3(d3, dp, fieldA, myQi) * invJ[d2 * dim + dp]; 725e0eea495SMark } 72652cdd6eaSMark g3(d, d2, fieldA, myQi) *= wj; 727e0eea495SMark } 72852cdd6eaSMark g2(d, fieldA, myQi) *= wj; 729e0eea495SMark } 730e0eea495SMark }); 73152cdd6eaSMark }); // Nq 732e0eea495SMark team.team_barrier(); 7331eec90e4SMark Adams { /* assemble */ 7348fdabdddSMark Adams for (PetscInt fieldA = 0; fieldA < loc_Nf; fieldA++) { 735930e68a5SMark Adams /* assemble */ 7361eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 7371eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 7381eec90e4SMark Adams PetscScalar t = 0; 7391eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 740e0eea495SMark const PetscReal *BJq = &d_BB[qj * Nb], *DIq = &d_DD[qj * Nb * dim]; 7411eec90e4SMark Adams for (int d = 0; d < dim; ++d) { 7421eec90e4SMark Adams t += DIq[f * dim + d] * g2(d, fieldA, qj) * BJq[g]; 743ad540459SPierre Jolivet for (int d2 = 0; d2 < dim; ++d2) t += DIq[f * dim + d] * g3(d, d2, fieldA, qj) * DIq[g * dim + d2]; 744e0eea495SMark } 745930e68a5SMark Adams } 7468a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { // CPU assembly 747bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 7481eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 7498fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 750bfbbad94Smarkadams4 #endif 75119be780dSMark Adams } else { 752cada7fc7SMark Adams landau_mat_assemble(d_mat, d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch); 75319be780dSMark Adams } 7541eec90e4SMark Adams }); 7551eec90e4SMark Adams }); 7561eec90e4SMark Adams } 757a587d139SMark } 75819be780dSMark Adams } // scope with 'grid' 75981451871SMark Adams }; 7609566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[4], 0, 0, 0, 0)); 7619566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 762d9008a5dSMark Adams PetscCall(PetscInfo(plex[0], "Jacobian shared memory size: %d bytes in level %s (max shared=%d), num cells total=%d, team size=%d, vector size=%d, #face=%d, Nf_max=%d\n", jac_scr_bytes, jac_shared_level == 0 ? "local" : "global", maximum_shared_mem_size, num_cells_batch * batch_sz, team_size, vector_size, nfaces, Nf_max)); 763d9008a5dSMark Adams Kokkos::parallel_for("Jacobian", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size).set_scratch_size(jac_shared_level, Kokkos::PerTeam(jac_scr_bytes)), jac_lambda); // Kokkos::LaunchBounds<512,2> 764d9008a5dSMark Adams Kokkos::fence(); 7659566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7669566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[4], 0, 0, 0, 0)); 76719be780dSMark Adams if (d_vertex_f_k) delete d_vertex_f_k; 768dbabbaf5SMark Adams } else { // mass 7699566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[16], 0, 0, 0, 0)); 7709566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 771dbabbaf5SMark Adams PetscCall(PetscInfo(plex[0], "Mass team size=%d vector size=%d #face=%d Nb=%" PetscInt_FMT ", %s assembly\n", team_size, vector_size, nfaces, Nb, d_coo_vals ? "COO" : "CSR")); 7729371c9d4SSatish Balay Kokkos::parallel_for( 7739371c9d4SSatish Balay "Mass", Kokkos::TeamPolicy<>(num_cells_batch * batch_sz, team_size, vector_size), KOKKOS_LAMBDA(const team_member team) { // Kokkos::LaunchBounds<512,4> 7748fdabdddSMark Adams const PetscInt b_Nelem = d_elem_offset[num_grids], b_elem_idx = team.league_rank() % b_Nelem, b_id = team.league_rank() / b_Nelem; 7758a6f2e61SMark Adams // find my grid 7768fdabdddSMark Adams PetscInt grid = 0; 7778fdabdddSMark Adams while (b_elem_idx >= d_elem_offset[grid + 1]) grid++; 7788a6f2e61SMark Adams { 779bfbbad94Smarkadams4 const PetscInt loc_Nf = d_species_offset[grid + 1] - d_species_offset[grid], loc_elem = b_elem_idx - d_elem_offset[grid], jpidx_0 = d_ip_offset[grid] + loc_elem * Nq; 780bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 781bfbbad94Smarkadams4 const PetscInt totDim = loc_Nf * Nq; 782bfbbad94Smarkadams4 #endif 7838fdabdddSMark Adams const PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, d_mat_offset); 7848fdabdddSMark Adams for (int fieldA = 0; fieldA < loc_Nf; fieldA++) { 7851eec90e4SMark Adams /* assemble */ 7861eec90e4SMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, 0, Nb), [=](int f) { 7871eec90e4SMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team, 0, Nb), [=](int g) { 7881eec90e4SMark Adams PetscScalar t = 0; 7891eec90e4SMark Adams for (int qj = 0; qj < Nq; qj++) { // look at others integration points 7901eec90e4SMark Adams const PetscReal *BJq = &d_BB[qj * Nb]; 7918fdabdddSMark Adams const PetscInt jpidx_glb = jpidx_0 + qj; 7928a6f2e61SMark Adams if (dim == 2) { 7938fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g] * 2. * PETSC_PI; 7948a6f2e61SMark Adams } else { 7958fdabdddSMark Adams t += BJq[f] * d_w_k(jpidx_glb) * shift * BJq[g]; 7961eec90e4SMark Adams } 7978a6f2e61SMark Adams } 7988a6f2e61SMark Adams if (elem_mat_num_cells_max_grid) { 799bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 8001eec90e4SMark Adams const PetscInt fOff = (fieldA * Nb + f) * totDim + fieldA * Nb + g; 8018fdabdddSMark Adams d_elem_mats(b_id, grid, loc_elem, fOff) = t; 802bfbbad94Smarkadams4 #endif 803ad4b5651SMark Adams } else { 804cada7fc7SMark Adams landau_mat_assemble(d_mat, d_coo_vals, t, f, g, Nb, moffset, loc_elem, fieldA, maps[grid], d_coo_elem_offsets, d_coo_elem_fullNb, d_coo_elem_point_offsets, b_elem_idx, b_id * coo_sz_batch); 805ad4b5651SMark Adams } 806e0eea495SMark }); 807e0eea495SMark }); 80813241b68SMark Adams } // field 80913241b68SMark Adams } // grid 8101eec90e4SMark Adams }); 811d9008a5dSMark Adams Kokkos::fence(); 8129566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 8139566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[16], 0, 0, 0, 0)); 8141eec90e4SMark Adams } 815bfc784b7SMark Adams if (d_coo_vals) { 8169566063dSJacob Faibussowitsch PetscCall(MatSetValuesCOO(JacP, d_coo_vals, ADD_VALUES)); 817bfbbad94Smarkadams4 #ifndef LAND_SUPPORT_CPU_ASS 818bfbbad94Smarkadams4 Kokkos::fence(); // for timers 819bfbbad94Smarkadams4 #endif 820bfc784b7SMark Adams } else if (elem_mat_num_cells_max_grid) { // CPU assembly 821bfbbad94Smarkadams4 #ifdef LAND_SUPPORT_CPU_ASS 8228fdabdddSMark Adams Kokkos::View<PetscScalar ****, Kokkos::LayoutRight>::HostMirror h_elem_mats = Kokkos::create_mirror_view(d_elem_mats); 823e0eea495SMark Kokkos::deep_copy(h_elem_mats, d_elem_mats); 824d618d24fSMark Adams PetscCheck(!container, PETSC_COMM_SELF, PETSC_ERR_PLIB, "?????"); 8258fdabdddSMark Adams for (PetscInt b_id = 0; b_id < batch_sz; b_id++) { // OpenMP (once) 8268a6f2e61SMark Adams for (PetscInt grid = 0; grid < num_grids; grid++) { 8278a6f2e61SMark Adams PetscSection section, globalSection; 8288a6f2e61SMark Adams PetscInt cStart, cEnd; 8298fdabdddSMark Adams Mat B = subJ[LAND_PACK_IDX(b_id, grid)]; 8308fdabdddSMark Adams PetscInt moffset = LAND_MOFFSET(b_id, grid, batch_sz, num_grids, a_mat_offset), nloc, nzl, colbuf[1024], row; 8318fdabdddSMark Adams const PetscInt *cols; 8328fdabdddSMark Adams const PetscScalar *vals; 8339566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[5], 0, 0, 0, 0)); 8349566063dSJacob Faibussowitsch PetscCall(DMPlexGetHeightStratum(plex[grid], 0, &cStart, &cEnd)); 8359566063dSJacob Faibussowitsch PetscCall(DMGetLocalSection(plex[grid], §ion)); 8369566063dSJacob Faibussowitsch PetscCall(DMGetGlobalSection(plex[grid], &globalSection)); 8379566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[5], 0, 0, 0, 0)); 8389566063dSJacob Faibussowitsch PetscCall(PetscLogEventBegin(events[6], 0, 0, 0, 0)); 8398a6f2e61SMark Adams for (PetscInt ej = cStart; ej < cEnd; ++ej) { 8408fdabdddSMark Adams const PetscScalar *elMat = &h_elem_mats(b_id, grid, ej - cStart, 0); 8419566063dSJacob Faibussowitsch PetscCall(DMPlexMatSetClosure(plex[grid], section, globalSection, B, ej, elMat, ADD_VALUES)); 8428a6f2e61SMark Adams if (grid == 0 && ej == -1) { 8438fdabdddSMark Adams const PetscInt loc_Nf = a_species_offset[grid + 1] - a_species_offset[grid], totDim = loc_Nf * Nq; 844e0eea495SMark int d, f; 8458a6f2e61SMark Adams PetscPrintf(PETSC_COMM_SELF, "Kokkos Element matrix %d/%d\n", 1, (int)a_numCells[grid]); 846e0eea495SMark for (d = 0; d < totDim; ++d) { 84752cdd6eaSMark for (f = 0; f < totDim; ++f) PetscPrintf(PETSC_COMM_SELF, " %12.5e", PetscRealPart(elMat[d * totDim + f])); 84852cdd6eaSMark PetscPrintf(PETSC_COMM_SELF, "\n"); 849e0eea495SMark } 850e8d2b73aSMark Adams exit(14); 851e0eea495SMark } 852e0eea495SMark } 8538fdabdddSMark Adams // move nest matrix to global JacP 8549566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 8559566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 8569566063dSJacob Faibussowitsch PetscCall(MatGetSize(B, &nloc, NULL)); 8578a6f2e61SMark Adams for (int i = 0; i < nloc; i++) { 8589566063dSJacob Faibussowitsch PetscCall(MatGetRow(B, i, &nzl, &cols, &vals)); 85963a3b9bcSJacob Faibussowitsch PetscCheck(nzl <= 1024, PetscObjectComm((PetscObject)B), PETSC_ERR_PLIB, "Row too big: %" PetscInt_FMT, nzl); 8608a6f2e61SMark Adams for (int j = 0; j < nzl; j++) colbuf[j] = cols[j] + moffset; 8618a6f2e61SMark Adams row = i + moffset; 8629566063dSJacob Faibussowitsch PetscCall(MatSetValues(JacP, 1, &row, nzl, colbuf, vals, ADD_VALUES)); 8639566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(B, i, &nzl, &cols, &vals)); 8648a6f2e61SMark Adams } 8659566063dSJacob Faibussowitsch PetscCall(MatDestroy(&subJ[LAND_PACK_IDX(b_id, grid)])); 8669566063dSJacob Faibussowitsch PetscCall(PetscLogEventEnd(events[6], 0, 0, 0, 0)); 8678a6f2e61SMark Adams } // grids 868a587d139SMark } 869bfbbad94Smarkadams4 #else 870bfbbad94Smarkadams4 SETERRQ(PETSC_COMM_SELF, PETSC_ERR_PLIB, "CPU assembly not supported"); 871bfbbad94Smarkadams4 #endif 8728fdabdddSMark Adams } 873e0eea495SMark PetscFunctionReturn(0); 874e0eea495SMark } 875e0eea495SMark } // extern "C" 8768d80707aSStefano Zampini #endif 877