1dd5b3ca6SJunchao Zhang #include <../src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h> 2dd5b3ca6SJunchao Zhang 3dd5b3ca6SJunchao Zhang /* Reuse the type. The difference is some fields (i.e., displs, recvcounts) are not used in Allgather on rank != 0, which is not a big deal */ 4dd5b3ca6SJunchao Zhang typedef PetscSF_Allgatherv PetscSF_Allgather; 5dd5b3ca6SJunchao Zhang 6ad227feaSJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFBcastBegin_Gather(PetscSF,MPI_Datatype,PetscMemType,const void*,PetscMemType,void*,MPI_Op); 7dd5b3ca6SJunchao Zhang 8cd620004SJunchao Zhang PetscErrorCode PetscSFSetUp_Allgather(PetscSF sf) 9cd620004SJunchao Zhang { 10cd620004SJunchao Zhang PetscInt i; 11cd620004SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 12cd620004SJunchao Zhang 13cd620004SJunchao Zhang PetscFunctionBegin; 14cd620004SJunchao Zhang for (i=PETSCSF_LOCAL; i<=PETSCSF_REMOTE; i++) { 15cd620004SJunchao Zhang sf->leafbuflen[i] = 0; 16cd620004SJunchao Zhang sf->leafstart[i] = 0; 17cd620004SJunchao Zhang sf->leafcontig[i] = PETSC_TRUE; 18cd620004SJunchao Zhang sf->leafdups[i] = PETSC_FALSE; 19cd620004SJunchao Zhang dat->rootbuflen[i] = 0; 20cd620004SJunchao Zhang dat->rootstart[i] = 0; 21cd620004SJunchao Zhang dat->rootcontig[i] = PETSC_TRUE; 22cd620004SJunchao Zhang dat->rootdups[i] = PETSC_FALSE; 23cd620004SJunchao Zhang } 24cd620004SJunchao Zhang 25cd620004SJunchao Zhang sf->leafbuflen[PETSCSF_REMOTE] = sf->nleaves; 26cd620004SJunchao Zhang dat->rootbuflen[PETSCSF_REMOTE] = sf->nroots; 27cd620004SJunchao Zhang sf->persistent = PETSC_FALSE; 28cd620004SJunchao Zhang sf->nleafreqs = 0; /* MPI collectives only need one request. We treat it as a root request. */ 29cd620004SJunchao Zhang dat->nrootreqs = 1; 30cd620004SJunchao Zhang PetscFunctionReturn(0); 31cd620004SJunchao Zhang } 32cd620004SJunchao Zhang 33ad227feaSJunchao Zhang static PetscErrorCode PetscSFBcastBegin_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) 34dd5b3ca6SJunchao Zhang { 35cd620004SJunchao Zhang PetscSFLink link; 36dd5b3ca6SJunchao Zhang PetscMPIInt sendcount; 37dd5b3ca6SJunchao Zhang MPI_Comm comm; 38cd620004SJunchao Zhang void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ 39cd620004SJunchao Zhang MPI_Request *req; 40dd5b3ca6SJunchao Zhang 41dd5b3ca6SJunchao Zhang PetscFunctionBegin; 42*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_BCAST,&link)); 43*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkPackRootData(sf,link,PETSCSF_REMOTE,rootdata)); 44*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkCopyRootBufferInCaseNotUseGpuAwareMPI(sf,link,PETSC_TRUE/* device2host before sending */)); 45*9566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf,&comm)); 46*9566063dSJacob Faibussowitsch PetscCall(PetscMPIIntCast(sf->nroots,&sendcount)); 47*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_ROOT2LEAF,&rootbuf,&leafbuf,&req,NULL)); 48*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkSyncStreamBeforeCallMPI(sf,link,PETSCSF_ROOT2LEAF)); 49*9566063dSJacob Faibussowitsch PetscCallMPI(MPIU_Iallgather(rootbuf,sendcount,unit,leafbuf,sendcount,unit,comm,req)); 50855db38dSJunchao Zhang PetscFunctionReturn(0); 51855db38dSJunchao Zhang } 52855db38dSJunchao Zhang 53855db38dSJunchao Zhang static PetscErrorCode PetscSFReduceBegin_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) 54855db38dSJunchao Zhang { 55cd620004SJunchao Zhang PetscSFLink link; 56855db38dSJunchao Zhang PetscInt rstart; 57855db38dSJunchao Zhang MPI_Comm comm; 58cd620004SJunchao Zhang PetscMPIInt rank,count,recvcount; 59cd620004SJunchao Zhang void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ 60cd620004SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 61cd620004SJunchao Zhang MPI_Request *req; 62855db38dSJunchao Zhang 63855db38dSJunchao Zhang PetscFunctionBegin; 64*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_REDUCE,&link)); 6583df288dSJunchao Zhang if (op == MPI_REPLACE) { 66855db38dSJunchao Zhang /* REPLACE is only meaningful when all processes have the same leafdata to reduce. Therefore copy from local leafdata is fine */ 67*9566063dSJacob Faibussowitsch PetscCall(PetscLayoutGetRange(sf->map,&rstart,NULL)); 68*9566063dSJacob Faibussowitsch PetscCall((*link->Memcpy)(link,rootmtype,rootdata,leafmtype,(const char*)leafdata+(size_t)rstart*link->unitbytes,(size_t)sf->nroots*link->unitbytes)); 69*9566063dSJacob Faibussowitsch if (PetscMemTypeDevice(leafmtype) && PetscMemTypeHost(rootmtype)) PetscCall((*link->SyncStream)(link)); /* Sync the device to host memcpy */ 70dd5b3ca6SJunchao Zhang } else { 71*9566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf,&comm)); 72*9566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm,&rank)); 73*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkPackLeafData(sf,link,PETSCSF_REMOTE,leafdata)); 74*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkCopyLeafBufferInCaseNotUseGpuAwareMPI(sf,link,PETSC_TRUE/* device2host before sending */)); 75*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_LEAF2ROOT,&rootbuf,&leafbuf,&req,NULL)); 76*9566063dSJacob Faibussowitsch PetscCall(PetscMPIIntCast(dat->rootbuflen[PETSCSF_REMOTE],&recvcount)); 77dd400576SPatrick Sanan if (rank == 0 && !link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi]) { 78*9566063dSJacob Faibussowitsch PetscCall(PetscSFMalloc(sf,link->leafmtype_mpi,sf->leafbuflen[PETSCSF_REMOTE]*link->unitbytes,(void**)&link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi])); 79cd620004SJunchao Zhang } 80dd400576SPatrick Sanan if (rank == 0 && link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi] == leafbuf) leafbuf = MPI_IN_PLACE; 81*9566063dSJacob Faibussowitsch PetscCall(PetscMPIIntCast(sf->nleaves*link->bs,&count)); 82*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkSyncStreamBeforeCallMPI(sf,link,PETSCSF_LEAF2ROOT)); 83*9566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce(leafbuf,link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi],count,link->basicunit,op,0,comm)); /* Must do reduce with MPI builltin datatype basicunit */ 84*9566063dSJacob Faibussowitsch PetscCallMPI(MPIU_Iscatter(link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi],recvcount,unit,rootbuf,recvcount,unit,0/*rank 0*/,comm,req)); 85dd5b3ca6SJunchao Zhang } 86dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 87dd5b3ca6SJunchao Zhang } 88dd5b3ca6SJunchao Zhang 89eb02082bSJunchao Zhang static PetscErrorCode PetscSFBcastToZero_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata) 90dd5b3ca6SJunchao Zhang { 91cd620004SJunchao Zhang PetscSFLink link; 92855db38dSJunchao Zhang PetscMPIInt rank; 93dd5b3ca6SJunchao Zhang 94dd5b3ca6SJunchao Zhang PetscFunctionBegin; 95*9566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin_Gather(sf,unit,rootmtype,rootdata,leafmtype,leafdata,MPI_REPLACE)); 96*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkGetInUse(sf,unit,rootdata,leafdata,PETSC_OWN_POINTER,&link)); 97*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkFinishCommunication(sf,link,PETSCSF_ROOT2LEAF)); 98*9566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)sf),&rank)); 99dd400576SPatrick Sanan if (rank == 0 && PetscMemTypeDevice(leafmtype) && !sf->use_gpu_aware_mpi) { 100*9566063dSJacob Faibussowitsch PetscCall((*link->Memcpy)(link,PETSC_MEMTYPE_DEVICE,leafdata,PETSC_MEMTYPE_HOST,link->leafbuf[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST],sf->leafbuflen[PETSCSF_REMOTE]*link->unitbytes)); 101855db38dSJunchao Zhang } 102*9566063dSJacob Faibussowitsch PetscCall(PetscSFLinkReclaim(sf,&link)); 103dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 104dd5b3ca6SJunchao Zhang } 105dd5b3ca6SJunchao Zhang 106dd5b3ca6SJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFCreate_Allgather(PetscSF sf) 107dd5b3ca6SJunchao Zhang { 108dd5b3ca6SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 109dd5b3ca6SJunchao Zhang 110dd5b3ca6SJunchao Zhang PetscFunctionBegin; 111ad227feaSJunchao Zhang sf->ops->BcastEnd = PetscSFBcastEnd_Basic; 1129319200aSJunchao Zhang sf->ops->ReduceEnd = PetscSFReduceEnd_Allgatherv; 113dd5b3ca6SJunchao Zhang 114dd5b3ca6SJunchao Zhang /* Inherit from Allgatherv */ 115dd5b3ca6SJunchao Zhang sf->ops->Reset = PetscSFReset_Allgatherv; 116dd5b3ca6SJunchao Zhang sf->ops->Destroy = PetscSFDestroy_Allgatherv; 117dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Allgatherv; 118dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; 119dd5b3ca6SJunchao Zhang sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; 120dd5b3ca6SJunchao Zhang sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; 121dd5b3ca6SJunchao Zhang sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; 122dd5b3ca6SJunchao Zhang sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; 123dd5b3ca6SJunchao Zhang 124dd5b3ca6SJunchao Zhang /* Allgather stuff */ 125cd620004SJunchao Zhang sf->ops->SetUp = PetscSFSetUp_Allgather; 126ad227feaSJunchao Zhang sf->ops->BcastBegin = PetscSFBcastBegin_Allgather; 127dd5b3ca6SJunchao Zhang sf->ops->ReduceBegin = PetscSFReduceBegin_Allgather; 128dd5b3ca6SJunchao Zhang sf->ops->BcastToZero = PetscSFBcastToZero_Allgather; 129dd5b3ca6SJunchao Zhang 130*9566063dSJacob Faibussowitsch PetscCall(PetscNewLog(sf,&dat)); 131dd5b3ca6SJunchao Zhang sf->data = (void*)dat; 132dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 133dd5b3ca6SJunchao Zhang } 134