1dd5b3ca6SJunchao Zhang #include <../src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h> 2dd5b3ca6SJunchao Zhang 3dd5b3ca6SJunchao Zhang /* Reuse the type. The difference is some fields (i.e., displs, recvcounts) are not used in Allgather on rank != 0, which is not a big deal */ 4dd5b3ca6SJunchao Zhang typedef PetscSF_Allgatherv PetscSF_Allgather; 5dd5b3ca6SJunchao Zhang 6eb02082bSJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFBcastAndOpBegin_Gather(PetscSF,MPI_Datatype,PetscMemType,const void*,PetscMemType,void*,MPI_Op); 7dd5b3ca6SJunchao Zhang 8*cd620004SJunchao Zhang PetscErrorCode PetscSFSetUp_Allgather(PetscSF sf) 9*cd620004SJunchao Zhang { 10*cd620004SJunchao Zhang PetscInt i; 11*cd620004SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 12*cd620004SJunchao Zhang 13*cd620004SJunchao Zhang PetscFunctionBegin; 14*cd620004SJunchao Zhang for (i=PETSCSF_LOCAL; i<=PETSCSF_REMOTE; i++) { 15*cd620004SJunchao Zhang sf->leafbuflen[i] = 0; 16*cd620004SJunchao Zhang sf->leafstart[i] = 0; 17*cd620004SJunchao Zhang sf->leafcontig[i] = PETSC_TRUE; 18*cd620004SJunchao Zhang sf->leafdups[i] = PETSC_FALSE; 19*cd620004SJunchao Zhang dat->rootbuflen[i] = 0; 20*cd620004SJunchao Zhang dat->rootstart[i] = 0; 21*cd620004SJunchao Zhang dat->rootcontig[i] = PETSC_TRUE; 22*cd620004SJunchao Zhang dat->rootdups[i] = PETSC_FALSE; 23*cd620004SJunchao Zhang } 24*cd620004SJunchao Zhang 25*cd620004SJunchao Zhang sf->leafbuflen[PETSCSF_REMOTE] = sf->nleaves; 26*cd620004SJunchao Zhang dat->rootbuflen[PETSCSF_REMOTE] = sf->nroots; 27*cd620004SJunchao Zhang sf->persistent = PETSC_FALSE; 28*cd620004SJunchao Zhang sf->nleafreqs = 0; /* MPI collectives only need one request. We treat it as a root request. */ 29*cd620004SJunchao Zhang dat->nrootreqs = 1; 30*cd620004SJunchao Zhang PetscFunctionReturn(0); 31*cd620004SJunchao Zhang } 32*cd620004SJunchao Zhang 33eb02082bSJunchao Zhang static PetscErrorCode PetscSFBcastAndOpBegin_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) 34dd5b3ca6SJunchao Zhang { 35dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 36*cd620004SJunchao Zhang PetscSFLink link; 37dd5b3ca6SJunchao Zhang PetscMPIInt sendcount; 38dd5b3ca6SJunchao Zhang MPI_Comm comm; 39*cd620004SJunchao Zhang void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ 40*cd620004SJunchao Zhang MPI_Request *req; 41dd5b3ca6SJunchao Zhang 42dd5b3ca6SJunchao Zhang PetscFunctionBegin; 43*cd620004SJunchao Zhang ierr = PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_BCAST,&link);CHKERRQ(ierr); 44*cd620004SJunchao Zhang ierr = PetscSFLinkPackRootData(sf,link,PETSCSF_REMOTE,rootdata);CHKERRQ(ierr); 45dd5b3ca6SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 46dd5b3ca6SJunchao Zhang ierr = PetscMPIIntCast(sf->nroots,&sendcount);CHKERRQ(ierr); 47*cd620004SJunchao Zhang ierr = PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_ROOT2LEAF,&rootbuf,&leafbuf,&req,NULL);CHKERRQ(ierr); 48*cd620004SJunchao Zhang ierr = MPIU_Iallgather(rootbuf,sendcount,unit,leafbuf,sendcount,unit,comm,req);CHKERRQ(ierr); 49855db38dSJunchao Zhang PetscFunctionReturn(0); 50855db38dSJunchao Zhang } 51855db38dSJunchao Zhang 52855db38dSJunchao Zhang static PetscErrorCode PetscSFReduceBegin_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) 53855db38dSJunchao Zhang { 54855db38dSJunchao Zhang PetscErrorCode ierr; 55*cd620004SJunchao Zhang PetscSFLink link; 56855db38dSJunchao Zhang PetscInt rstart; 57855db38dSJunchao Zhang MPI_Comm comm; 58*cd620004SJunchao Zhang PetscMPIInt rank,count,recvcount; 59*cd620004SJunchao Zhang void *rootbuf = NULL,*leafbuf = NULL; /* buffer seen by MPI */ 60*cd620004SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 61*cd620004SJunchao Zhang MPI_Request *req; 62855db38dSJunchao Zhang 63855db38dSJunchao Zhang PetscFunctionBegin; 64*cd620004SJunchao Zhang ierr = PetscSFLinkCreate(sf,unit,rootmtype,rootdata,leafmtype,leafdata,op,PETSCSF_REDUCE,&link);CHKERRQ(ierr); 65dd5b3ca6SJunchao Zhang if (op == MPIU_REPLACE) { 66855db38dSJunchao Zhang /* REPLACE is only meaningful when all processes have the same leafdata to reduce. Therefore copy from local leafdata is fine */ 67855db38dSJunchao Zhang ierr = PetscLayoutGetRange(sf->map,&rstart,NULL);CHKERRQ(ierr); 68855db38dSJunchao Zhang ierr = PetscMemcpyWithMemType(rootmtype,leafmtype,rootdata,(const char*)leafdata+(size_t)rstart*link->unitbytes,(size_t)sf->nroots*link->unitbytes);CHKERRQ(ierr); 69dd5b3ca6SJunchao Zhang } else { 70*cd620004SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 71*cd620004SJunchao Zhang ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 72*cd620004SJunchao Zhang ierr = PetscSFLinkPackLeafData(sf,link,PETSCSF_REMOTE,leafdata);CHKERRQ(ierr); 73*cd620004SJunchao Zhang ierr = PetscSFLinkGetMPIBuffersAndRequests(sf,link,PETSCSF_LEAF2ROOT,&rootbuf,&leafbuf,&req,NULL);CHKERRQ(ierr); 74*cd620004SJunchao Zhang ierr = PetscMPIIntCast(dat->rootbuflen[PETSCSF_REMOTE],&recvcount);CHKERRQ(ierr); 75*cd620004SJunchao Zhang if (!rank && !link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi]) { 76*cd620004SJunchao Zhang ierr = PetscMallocWithMemType(link->leafmtype_mpi,sf->leafbuflen[PETSCSF_REMOTE]*link->unitbytes,(void**)&link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi]);CHKERRQ(ierr); 77*cd620004SJunchao Zhang } 78*cd620004SJunchao Zhang if (!rank && link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi] == leafbuf) leafbuf = MPI_IN_PLACE; 79*cd620004SJunchao Zhang ierr = PetscMPIIntCast(sf->nleaves*link->bs,&count);CHKERRQ(ierr); 80*cd620004SJunchao Zhang ierr = MPI_Reduce(leafbuf,link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi],count,link->basicunit,op,0,comm);CHKERRQ(ierr); /* Must do reduce with MPI builltin datatype basicunit */ 81*cd620004SJunchao Zhang ierr = MPIU_Iscatter(link->leafbuf_alloc[PETSCSF_REMOTE][link->leafmtype_mpi],recvcount,unit,rootbuf,recvcount,unit,0/*rank 0*/,comm,req);CHKERRQ(ierr); 82dd5b3ca6SJunchao Zhang } 83dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 84dd5b3ca6SJunchao Zhang } 85dd5b3ca6SJunchao Zhang 86eb02082bSJunchao Zhang static PetscErrorCode PetscSFBcastToZero_Allgather(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata) 87dd5b3ca6SJunchao Zhang { 88dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 89*cd620004SJunchao Zhang PetscSFLink link; 90855db38dSJunchao Zhang PetscMPIInt rank; 91dd5b3ca6SJunchao Zhang 92dd5b3ca6SJunchao Zhang PetscFunctionBegin; 93eb02082bSJunchao Zhang ierr = PetscSFBcastAndOpBegin_Gather(sf,unit,rootmtype,rootdata,leafmtype,leafdata,MPIU_REPLACE);CHKERRQ(ierr); 94*cd620004SJunchao Zhang ierr = PetscSFLinkGetInUse(sf,unit,rootdata,leafdata,PETSC_OWN_POINTER,&link);CHKERRQ(ierr); 95*cd620004SJunchao Zhang ierr = PetscSFLinkMPIWaitall(sf,link,PETSCSF_ROOT2LEAF);CHKERRQ(ierr); 96855db38dSJunchao Zhang ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)sf),&rank);CHKERRQ(ierr); 97855db38dSJunchao Zhang if (!rank && leafmtype == PETSC_MEMTYPE_DEVICE && !use_gpu_aware_mpi) { 98*cd620004SJunchao Zhang ierr = PetscMemcpyWithMemType(PETSC_MEMTYPE_DEVICE,PETSC_MEMTYPE_HOST,leafdata,link->leafbuf[PETSCSF_REMOTE][PETSC_MEMTYPE_HOST],sf->leafbuflen[PETSCSF_REMOTE]*link->unitbytes);CHKERRQ(ierr); 99855db38dSJunchao Zhang } 100*cd620004SJunchao Zhang ierr = PetscSFLinkReclaim(sf,&link);CHKERRQ(ierr); 101dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 102dd5b3ca6SJunchao Zhang } 103dd5b3ca6SJunchao Zhang 104dd5b3ca6SJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFCreate_Allgather(PetscSF sf) 105dd5b3ca6SJunchao Zhang { 106dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 107dd5b3ca6SJunchao Zhang PetscSF_Allgather *dat = (PetscSF_Allgather*)sf->data; 108dd5b3ca6SJunchao Zhang 109dd5b3ca6SJunchao Zhang PetscFunctionBegin; 110*cd620004SJunchao Zhang sf->ops->BcastAndOpEnd = PetscSFBcastAndOpEnd_Basic; 111*cd620004SJunchao Zhang sf->ops->ReduceEnd = PetscSFReduceEnd_Basic; 112dd5b3ca6SJunchao Zhang 113dd5b3ca6SJunchao Zhang /* Inherit from Allgatherv */ 114dd5b3ca6SJunchao Zhang sf->ops->Reset = PetscSFReset_Allgatherv; 115dd5b3ca6SJunchao Zhang sf->ops->Destroy = PetscSFDestroy_Allgatherv; 116dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Allgatherv; 117dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; 118dd5b3ca6SJunchao Zhang sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; 119dd5b3ca6SJunchao Zhang sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; 120dd5b3ca6SJunchao Zhang sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; 121dd5b3ca6SJunchao Zhang sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; 122dd5b3ca6SJunchao Zhang 123dd5b3ca6SJunchao Zhang /* Allgather stuff */ 124*cd620004SJunchao Zhang sf->ops->SetUp = PetscSFSetUp_Allgather; 125dd5b3ca6SJunchao Zhang sf->ops->BcastAndOpBegin = PetscSFBcastAndOpBegin_Allgather; 126dd5b3ca6SJunchao Zhang sf->ops->ReduceBegin = PetscSFReduceBegin_Allgather; 127dd5b3ca6SJunchao Zhang sf->ops->BcastToZero = PetscSFBcastToZero_Allgather; 128dd5b3ca6SJunchao Zhang 129dd5b3ca6SJunchao Zhang ierr = PetscNewLog(sf,&dat);CHKERRQ(ierr); 130dd5b3ca6SJunchao Zhang sf->data = (void*)dat; 131dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 132dd5b3ca6SJunchao Zhang } 133