1dd5b3ca6SJunchao Zhang #include <../src/vec/is/sf/impls/basic/gatherv/sfgatherv.h> 2dd5b3ca6SJunchao Zhang 3dd5b3ca6SJunchao Zhang #define PetscSFPackGet_Gather PetscSFPackGet_Allgatherv 4dd5b3ca6SJunchao Zhang 5dd5b3ca6SJunchao Zhang /* Reuse the type. The difference is some fields (i.e., displs, recvcounts) are not used in Gather, which is not a big deal */ 6dd5b3ca6SJunchao Zhang typedef PetscSF_Allgatherv PetscSF_Gather; 7dd5b3ca6SJunchao Zhang 8*eb02082bSJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFBcastAndOpBegin_Gather(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) 9dd5b3ca6SJunchao Zhang { 10dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 11*eb02082bSJunchao Zhang PetscSFPack link; 12dd5b3ca6SJunchao Zhang PetscMPIInt rank,sendcount; 13dd5b3ca6SJunchao Zhang MPI_Comm comm; 14*eb02082bSJunchao Zhang char *recvbuf; 15dd5b3ca6SJunchao Zhang 16dd5b3ca6SJunchao Zhang PetscFunctionBegin; 17*eb02082bSJunchao Zhang ierr = PetscSFPackGet_Gather(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); 18dd5b3ca6SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 19dd5b3ca6SJunchao Zhang 20dd5b3ca6SJunchao Zhang if (op == MPIU_REPLACE) { 21*eb02082bSJunchao Zhang recvbuf = (char*)leafdata; 22dd5b3ca6SJunchao Zhang } else { 23dd5b3ca6SJunchao Zhang ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 24*eb02082bSJunchao Zhang if (!link->leafbuf[leafmtype] && !rank) {ierr = PetscMallocWithMemType(leafmtype,sf->nleaves*link->unitbytes,(void**)&link->leafbuf[leafmtype]);CHKERRQ(ierr);} 25*eb02082bSJunchao Zhang recvbuf = link->leafbuf[leafmtype]; 26dd5b3ca6SJunchao Zhang } 27dd5b3ca6SJunchao Zhang 28dd5b3ca6SJunchao Zhang ierr = PetscMPIIntCast(sf->nroots,&sendcount);CHKERRQ(ierr); 29*eb02082bSJunchao Zhang ierr = MPIU_Igather(rootdata,sendcount,unit,recvbuf,sendcount,unit,0/*rank 0*/,comm,link->rootreqs[PETSCSF_ROOT2LEAF_BCAST][rootmtype]);CHKERRQ(ierr); 30dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 31dd5b3ca6SJunchao Zhang } 32dd5b3ca6SJunchao Zhang 33*eb02082bSJunchao Zhang static PetscErrorCode PetscSFReduceBegin_Gather(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) 34dd5b3ca6SJunchao Zhang { 35dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 36*eb02082bSJunchao Zhang PetscSFPack link; 37dd5b3ca6SJunchao Zhang PetscMPIInt recvcount; 38dd5b3ca6SJunchao Zhang MPI_Comm comm; 39dd5b3ca6SJunchao Zhang void *recvbuf; 40dd5b3ca6SJunchao Zhang 41dd5b3ca6SJunchao Zhang PetscFunctionBegin; 42*eb02082bSJunchao Zhang ierr = PetscSFPackGet_Gather(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); 43dd5b3ca6SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 44dd5b3ca6SJunchao Zhang 45dd5b3ca6SJunchao Zhang if (op == MPIU_REPLACE) { 46*eb02082bSJunchao Zhang recvbuf = (char*)rootdata; 47dd5b3ca6SJunchao Zhang } else { 48*eb02082bSJunchao Zhang if (!link->rootbuf[rootmtype]) {ierr = PetscMallocWithMemType(rootmtype,sf->nroots*link->unitbytes,(void**)&link->rootbuf[rootmtype]);CHKERRQ(ierr);} 49*eb02082bSJunchao Zhang recvbuf = link->rootbuf[rootmtype]; 50dd5b3ca6SJunchao Zhang } 51dd5b3ca6SJunchao Zhang 52dd5b3ca6SJunchao Zhang ierr = PetscMPIIntCast(sf->nroots,&recvcount);CHKERRQ(ierr); 53*eb02082bSJunchao Zhang ierr = MPIU_Iscatter(leafdata,recvcount,unit,recvbuf,recvcount,unit,0/*rank 0*/,comm,link->rootreqs[PETSCSF_LEAF2ROOT_REDUCE][rootmtype]);CHKERRQ(ierr); 54dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 55dd5b3ca6SJunchao Zhang } 56dd5b3ca6SJunchao Zhang 57dd5b3ca6SJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFCreate_Gather(PetscSF sf) 58dd5b3ca6SJunchao Zhang { 59dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 60dd5b3ca6SJunchao Zhang PetscSF_Gather *dat = (PetscSF_Gather*)sf->data; 61dd5b3ca6SJunchao Zhang 62dd5b3ca6SJunchao Zhang PetscFunctionBegin; 63dd5b3ca6SJunchao Zhang /* Inherit from Allgatherv */ 64dd5b3ca6SJunchao Zhang sf->ops->Reset = PetscSFReset_Allgatherv; 65dd5b3ca6SJunchao Zhang sf->ops->Destroy = PetscSFDestroy_Allgatherv; 66dd5b3ca6SJunchao Zhang sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; 67dd5b3ca6SJunchao Zhang sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; 68dd5b3ca6SJunchao Zhang sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; 69dd5b3ca6SJunchao Zhang sf->ops->BcastAndOpEnd = PetscSFBcastAndOpEnd_Allgatherv; 70dd5b3ca6SJunchao Zhang sf->ops->ReduceEnd = PetscSFReduceEnd_Allgatherv; 71dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; 72dd5b3ca6SJunchao Zhang sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; 73dd5b3ca6SJunchao Zhang 74dd5b3ca6SJunchao Zhang /* Inherit from Gatherv */ 75dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Gatherv; 76dd5b3ca6SJunchao Zhang 77dd5b3ca6SJunchao Zhang /* Gather stuff */ 78dd5b3ca6SJunchao Zhang sf->ops->BcastAndOpBegin = PetscSFBcastAndOpBegin_Gather; 79dd5b3ca6SJunchao Zhang sf->ops->ReduceBegin = PetscSFReduceBegin_Gather; 80dd5b3ca6SJunchao Zhang 81dd5b3ca6SJunchao Zhang ierr = PetscNewLog(sf,&dat);CHKERRQ(ierr); 82dd5b3ca6SJunchao Zhang sf->data = (void*)dat; 83dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 84dd5b3ca6SJunchao Zhang } 85dd5b3ca6SJunchao Zhang 86