1dd5b3ca6SJunchao Zhang 2dd5b3ca6SJunchao Zhang #include <../src/vec/is/sf/impls/basic/gatherv/sfgatherv.h> 3dd5b3ca6SJunchao Zhang 4*eb02082bSJunchao Zhang #define PetscSFPackGet_Gatherv PetscSFPackGet_Allgatherv 5*eb02082bSJunchao Zhang 6*eb02082bSJunchao Zhang /* Reuse the type. The difference is some fields (displs, recvcounts) are only significant 7*eb02082bSJunchao Zhang on rank 0 in Gatherv. On other ranks they are harmless NULL. 8*eb02082bSJunchao Zhang */ 9*eb02082bSJunchao Zhang typedef PetscSF_Allgatherv PetscSF_Gatherv; 10*eb02082bSJunchao Zhang 11*eb02082bSJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFBcastAndOpBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,const void *rootdata,PetscMemType leafmtype,void *leafdata,MPI_Op op) 12dd5b3ca6SJunchao Zhang { 13dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 14*eb02082bSJunchao Zhang PetscSFPack link; 15dd5b3ca6SJunchao Zhang PetscMPIInt rank,sendcount; 16dd5b3ca6SJunchao Zhang MPI_Comm comm; 17*eb02082bSJunchao Zhang char *recvbuf; 18dd5b3ca6SJunchao Zhang PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; 19dd5b3ca6SJunchao Zhang 20dd5b3ca6SJunchao Zhang PetscFunctionBegin; 21*eb02082bSJunchao Zhang ierr = PetscSFPackGet_Gatherv(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); 22dd5b3ca6SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 23dd5b3ca6SJunchao Zhang ierr = PetscMPIIntCast(sf->nroots,&sendcount);CHKERRQ(ierr); 24dd5b3ca6SJunchao Zhang ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 25dd5b3ca6SJunchao Zhang 26dd5b3ca6SJunchao Zhang if (op == MPIU_REPLACE) { 27*eb02082bSJunchao Zhang recvbuf = (char*)leafdata; 28dd5b3ca6SJunchao Zhang } else { 29*eb02082bSJunchao Zhang if (!link->leafbuf[leafmtype] && !rank) {ierr = PetscMallocWithMemType(leafmtype,sf->nleaves*link->unitbytes,(void**)&link->leafbuf[leafmtype]);CHKERRQ(ierr);} /* Alloate leafbuf on rank 0 */ 30*eb02082bSJunchao Zhang recvbuf = link->leafbuf[leafmtype]; 31dd5b3ca6SJunchao Zhang } 32dd5b3ca6SJunchao Zhang 33*eb02082bSJunchao Zhang ierr = MPIU_Igatherv(rootdata,sendcount,unit,recvbuf,dat->recvcounts,dat->displs,unit,0/*rank 0*/,comm,link->rootreqs[PETSCSF_ROOT2LEAF_BCAST][rootmtype]);CHKERRQ(ierr); 34dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 35dd5b3ca6SJunchao Zhang } 36dd5b3ca6SJunchao Zhang 37*eb02082bSJunchao Zhang static PetscErrorCode PetscSFReduceBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType leafmtype,const void *leafdata,PetscMemType rootmtype,void *rootdata,MPI_Op op) 38dd5b3ca6SJunchao Zhang { 39dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 40*eb02082bSJunchao Zhang PetscSFPack link; 41dd5b3ca6SJunchao Zhang PetscMPIInt recvcount; 42dd5b3ca6SJunchao Zhang MPI_Comm comm; 43*eb02082bSJunchao Zhang char *recvbuf; 44dd5b3ca6SJunchao Zhang PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; 45dd5b3ca6SJunchao Zhang 46dd5b3ca6SJunchao Zhang PetscFunctionBegin; 47*eb02082bSJunchao Zhang ierr = PetscSFPackGet_Gatherv(sf,unit,rootmtype,rootdata,leafmtype,leafdata,&link);CHKERRQ(ierr); 48dd5b3ca6SJunchao Zhang ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 49dd5b3ca6SJunchao Zhang 50dd5b3ca6SJunchao Zhang if (op == MPIU_REPLACE) { 51*eb02082bSJunchao Zhang recvbuf = (char*)rootdata; 52dd5b3ca6SJunchao Zhang } else { 53*eb02082bSJunchao Zhang if (!link->rootbuf[rootmtype]) {ierr = PetscMallocWithMemType(rootmtype,sf->nroots*link->unitbytes,(void**)&link->rootbuf[rootmtype]);CHKERRQ(ierr);} 54*eb02082bSJunchao Zhang recvbuf = link->rootbuf[rootmtype]; 55dd5b3ca6SJunchao Zhang } 56dd5b3ca6SJunchao Zhang 57dd5b3ca6SJunchao Zhang ierr = PetscMPIIntCast(sf->nroots,&recvcount);CHKERRQ(ierr); 58*eb02082bSJunchao Zhang ierr = MPIU_Iscatterv(leafdata,dat->recvcounts,dat->displs,unit,recvbuf,recvcount,unit,0,comm,link->rootreqs[PETSCSF_LEAF2ROOT_REDUCE][rootmtype]);CHKERRQ(ierr); 59dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 60dd5b3ca6SJunchao Zhang } 61dd5b3ca6SJunchao Zhang 62*eb02082bSJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFFetchAndOpBegin_Gatherv(PetscSF sf,MPI_Datatype unit,PetscMemType rootmtype,void *rootdata,PetscMemType leafmtype,const void *leafdata,void *leafupdate,MPI_Op op) 63dd5b3ca6SJunchao Zhang { 64dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 65dd5b3ca6SJunchao Zhang 66dd5b3ca6SJunchao Zhang PetscFunctionBegin; 67dd5b3ca6SJunchao Zhang /* In Gatherv, each root only has one leaf. So we just need to bcast rootdata to leafupdate and then reduce leafdata to rootdata */ 68dd5b3ca6SJunchao Zhang ierr = PetscSFBcastAndOpBegin(sf,unit,rootdata,leafupdate,MPIU_REPLACE);CHKERRQ(ierr); 69dd5b3ca6SJunchao Zhang ierr = PetscSFBcastAndOpEnd(sf,unit,rootdata,leafupdate,MPIU_REPLACE);CHKERRQ(ierr); 70dd5b3ca6SJunchao Zhang ierr = PetscSFReduceBegin(sf,unit,leafdata,rootdata,op);CHKERRQ(ierr); 71dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 72dd5b3ca6SJunchao Zhang } 73dd5b3ca6SJunchao Zhang 74dd5b3ca6SJunchao Zhang PETSC_INTERN PetscErrorCode PetscSFCreate_Gatherv(PetscSF sf) 75dd5b3ca6SJunchao Zhang { 76dd5b3ca6SJunchao Zhang PetscErrorCode ierr; 77dd5b3ca6SJunchao Zhang PetscSF_Gatherv *dat = (PetscSF_Gatherv*)sf->data; 78dd5b3ca6SJunchao Zhang 79dd5b3ca6SJunchao Zhang PetscFunctionBegin; 80dd5b3ca6SJunchao Zhang /* Inherit from Allgatherv */ 81dd5b3ca6SJunchao Zhang sf->ops->SetUp = PetscSFSetUp_Allgatherv; 82dd5b3ca6SJunchao Zhang sf->ops->Reset = PetscSFReset_Allgatherv; 83dd5b3ca6SJunchao Zhang sf->ops->Destroy = PetscSFDestroy_Allgatherv; 84dd5b3ca6SJunchao Zhang sf->ops->GetGraph = PetscSFGetGraph_Allgatherv; 85dd5b3ca6SJunchao Zhang sf->ops->GetLeafRanks = PetscSFGetLeafRanks_Allgatherv; 86dd5b3ca6SJunchao Zhang sf->ops->GetRootRanks = PetscSFGetRootRanks_Allgatherv; 87dd5b3ca6SJunchao Zhang sf->ops->BcastAndOpEnd = PetscSFBcastAndOpEnd_Allgatherv; 88dd5b3ca6SJunchao Zhang sf->ops->ReduceEnd = PetscSFReduceEnd_Allgatherv; 89dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpEnd = PetscSFFetchAndOpEnd_Allgatherv; 90dd5b3ca6SJunchao Zhang sf->ops->CreateLocalSF = PetscSFCreateLocalSF_Allgatherv; 91dd5b3ca6SJunchao Zhang 92dd5b3ca6SJunchao Zhang /* Gatherv stuff */ 93dd5b3ca6SJunchao Zhang sf->ops->BcastAndOpBegin = PetscSFBcastAndOpBegin_Gatherv; 94dd5b3ca6SJunchao Zhang sf->ops->ReduceBegin = PetscSFReduceBegin_Gatherv; 95dd5b3ca6SJunchao Zhang sf->ops->FetchAndOpBegin = PetscSFFetchAndOpBegin_Gatherv; 96dd5b3ca6SJunchao Zhang 97dd5b3ca6SJunchao Zhang ierr = PetscNewLog(sf,&dat);CHKERRQ(ierr); 98dd5b3ca6SJunchao Zhang sf->data = (void*)dat; 99dd5b3ca6SJunchao Zhang PetscFunctionReturn(0); 100dd5b3ca6SJunchao Zhang } 101