1c4762a1bSJed Brown static char help[]= "Test PetscSFFetchAndOp on patterned SF graphs. PetscSFFetchAndOp internally uses PetscSFBcastAndOp \n\ 2c4762a1bSJed Brown and PetscSFReduce. So it is a good test to see if they all work for patterned graphs.\n\ 3c4762a1bSJed Brown Run with ./prog -op [replace | sum]\n\n"; 4c4762a1bSJed Brown 5c4762a1bSJed Brown #include <petscvec.h> 6c4762a1bSJed Brown #include <petscsf.h> 7c4762a1bSJed Brown int main(int argc,char **argv) 8c4762a1bSJed Brown { 9c4762a1bSJed Brown PetscInt i,N=10,low,high,nleaves; 10c4762a1bSJed Brown PetscMPIInt size,rank; 11c4762a1bSJed Brown Vec x,y,y2,gy2; 12c4762a1bSJed Brown PetscScalar *rootdata,*leafdata,*leafupdate; 13c4762a1bSJed Brown PetscLayout layout; 14c4762a1bSJed Brown PetscSF gathersf,allgathersf,alltoallsf; 15c4762a1bSJed Brown MPI_Op op=MPI_SUM; 16c4762a1bSJed Brown char opname[64]; 17c4762a1bSJed Brown const char *mpiopname; 18c4762a1bSJed Brown PetscBool flag,isreplace,issum; 19c4762a1bSJed Brown 20*327415f7SBarry Smith PetscFunctionBeginUser; 219566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc,&argv,(char*)0,help)); 229566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD,&size)); 239566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD,&rank)); 24c4762a1bSJed Brown 259566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL,NULL,"-op",opname,sizeof(opname),&flag)); 269566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname,"replace",&isreplace)); 279566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname,"sum",&issum)); 28c4762a1bSJed Brown 2983df288dSJunchao Zhang if (isreplace) {op = MPI_REPLACE; mpiopname = "MPI_REPLACE";} 30c4762a1bSJed Brown else if (issum) {op = MPIU_SUM; mpiopname = "MPI_SUM";} 3198921bdaSJacob Faibussowitsch else SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_ARG_WRONG,"Unsupported argument (%s) to -op, which must be 'replace' or 'sum'",opname); 32c4762a1bSJed Brown 339566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD,&x)); 349566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 359566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x,PETSC_DECIDE,N)); 36c4762a1bSJed Brown 37c4762a1bSJed Brown /*-------------------------------------*/ 38c4762a1bSJed Brown /* PETSCSF_PATTERN_GATHER */ 39c4762a1bSJed Brown /*-------------------------------------*/ 40c4762a1bSJed Brown 41c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 429566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x,&low,&high)); 439566063dSJacob Faibussowitsch for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES)); 449566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 459566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 46c4762a1bSJed Brown 47c4762a1bSJed Brown /* Create the gather SF */ 489566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_GATHER graph with op = %s\n",mpiopname)); 499566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x,&layout)); 509566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&gathersf)); 519566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(gathersf,layout,PETSCSF_PATTERN_GATHER)); 52c4762a1bSJed Brown 53c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 549566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(gathersf,NULL,&nleaves,NULL,NULL)); 559566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y)); 569566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y,&y2)); 57c4762a1bSJed Brown 589566063dSJacob Faibussowitsch PetscCall(VecGetArray(x,&rootdata)); 599566063dSJacob Faibussowitsch PetscCall(VecGetArray(y,&leafdata)); 609566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2,&leafupdate)); 61c4762a1bSJed Brown 62c4762a1bSJed Brown /* Bcast x to y,to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 639566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(gathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 649566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(gathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 659566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y,&leafdata)); 669566063dSJacob Faibussowitsch PetscCall(VecScale(y,2)); 679566063dSJacob Faibussowitsch PetscCall(VecGetArray(y,&leafdata)); 68c4762a1bSJed Brown 69c4762a1bSJed Brown /* FetchAndOp x to y */ 709566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(gathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 719566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(gathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 72c4762a1bSJed Brown 73c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is a gather graph, leafudpate = rootdata = [1,N], then rootdata += leafdata, i.e., [3,3*N] */ 749566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2)); 759566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x,"rootdata")); 769566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate")); 77c4762a1bSJed Brown 789566063dSJacob Faibussowitsch PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD)); 799566063dSJacob Faibussowitsch PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD)); 809566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 81c4762a1bSJed Brown 829566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2,&leafupdate)); 839566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 84c4762a1bSJed Brown 859566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y,&leafdata)); 869566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 87c4762a1bSJed Brown 889566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x,&rootdata)); 899566063dSJacob Faibussowitsch /* PetscCall(VecDestroy(&x)); */ /* We will reuse x in ALLGATHER, so do not destroy it */ 90c4762a1bSJed Brown 919566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&gathersf)); 92c4762a1bSJed Brown 93c4762a1bSJed Brown /*-------------------------------------*/ 94c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLGATHER */ 95c4762a1bSJed Brown /*-------------------------------------*/ 96c4762a1bSJed Brown 97c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 989566063dSJacob Faibussowitsch for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES)); 999566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1009566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 101c4762a1bSJed Brown 102c4762a1bSJed Brown /* Create the allgather SF */ 1039566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLGATHER graph with op = %s\n",mpiopname)); 1049566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x,&layout)); 1059566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&allgathersf)); 1069566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(allgathersf,layout,PETSCSF_PATTERN_ALLGATHER)); 107c4762a1bSJed Brown 108c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1099566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(allgathersf,NULL,&nleaves,NULL,NULL)); 1109566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y)); 1119566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y,&y2)); 112c4762a1bSJed Brown 1139566063dSJacob Faibussowitsch PetscCall(VecGetArray(x,&rootdata)); 1149566063dSJacob Faibussowitsch PetscCall(VecGetArray(y,&leafdata)); 1159566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2,&leafupdate)); 116c4762a1bSJed Brown 117c4762a1bSJed Brown /* Bcast x to y, to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 1189566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(allgathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 1199566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(allgathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 1209566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y,&leafdata)); 1219566063dSJacob Faibussowitsch PetscCall(VecScale(y,2)); 1229566063dSJacob Faibussowitsch PetscCall(VecGetArray(y,&leafdata)); 123c4762a1bSJed Brown 124c4762a1bSJed Brown /* FetchAndOp x to y */ 1259566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(allgathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 1269566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(allgathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 127c4762a1bSJed Brown 128c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an allgather graph, we have (suppose ranks get updates in ascending order) 129c4762a1bSJed Brown rank 0: leafupdate = rootdata = [1,N], rootdata += leafdata = [3,3*N] 130c4762a1bSJed Brown rank 1: leafupdate = rootdata = [3,3*N], rootdata += leafdata = [5,5*N] 131c4762a1bSJed Brown rank 2: leafupdate = rootdata = [5,5*N], rootdata += leafdata = [7,7*N] 132c4762a1bSJed Brown ... 133c4762a1bSJed Brown */ 1349566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2)); 1359566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x,"rootdata")); 1369566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate")); 137c4762a1bSJed Brown 1389566063dSJacob Faibussowitsch PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD)); 1399566063dSJacob Faibussowitsch PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD)); 1409566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 141c4762a1bSJed Brown 1429566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2,&leafupdate)); 1439566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 144c4762a1bSJed Brown 1459566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y,&leafdata)); 1469566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 147c4762a1bSJed Brown 1489566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x,&rootdata)); 1499566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); /* We won't reuse x in ALLGATHER, so destroy it */ 150c4762a1bSJed Brown 1519566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&allgathersf)); 152c4762a1bSJed Brown 153c4762a1bSJed Brown /*-------------------------------------*/ 154c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLTOALL */ 155c4762a1bSJed Brown /*-------------------------------------*/ 156c4762a1bSJed Brown 1579566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD,&x)); 1589566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 1599566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x,size,PETSC_DECIDE)); 160c4762a1bSJed Brown 161c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., size^2] */ 1629566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x,&low,&high)); 1639566063dSJacob Faibussowitsch for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES)); 1649566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1659566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 166c4762a1bSJed Brown 167c4762a1bSJed Brown /* Create the alltoall SF */ 1689566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLTOALL graph with op = %s\n",mpiopname)); 1699566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&alltoallsf)); 1709566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(alltoallsf,NULL/*insignificant*/,PETSCSF_PATTERN_ALLTOALL)); 171c4762a1bSJed Brown 172c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1739566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(alltoallsf,NULL,&nleaves,NULL,NULL)); 1749566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y)); 1759566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y,&y2)); 176c4762a1bSJed Brown 1779566063dSJacob Faibussowitsch PetscCall(VecGetArray(x,&rootdata)); 1789566063dSJacob Faibussowitsch PetscCall(VecGetArray(y,&leafdata)); 1799566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2,&leafupdate)); 180c4762a1bSJed Brown 181c4762a1bSJed Brown /* Bcast x to y, to initialize y = 1+rank+size*i, with i=0..size-1 */ 1829566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(alltoallsf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 1839566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(alltoallsf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE)); 184c4762a1bSJed Brown 185c4762a1bSJed Brown /* FetchAndOp x to y */ 1869566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(alltoallsf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 1879566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(alltoallsf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op)); 188c4762a1bSJed Brown 189c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an alltoall graph, each root has only one leaf. 190c4762a1bSJed Brown So, leafupdate = rootdata = 1+rank+size*i, i=0..size-1; and rootdata += leafdata, i.e., rootdata = [2,2*N] 191c4762a1bSJed Brown */ 1929566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2)); 1939566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x,"rootdata")); 1949566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate")); 195c4762a1bSJed Brown 1969566063dSJacob Faibussowitsch PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD)); 1979566063dSJacob Faibussowitsch PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD)); 1989566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 199c4762a1bSJed Brown 2009566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2,&leafupdate)); 2019566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 202c4762a1bSJed Brown 2039566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y,&leafdata)); 2049566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 205c4762a1bSJed Brown 2069566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x,&rootdata)); 2079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 208c4762a1bSJed Brown 2099566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&alltoallsf)); 210c4762a1bSJed Brown 2119566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 212b122ec5aSJacob Faibussowitsch return 0; 213c4762a1bSJed Brown } 214c4762a1bSJed Brown 215c4762a1bSJed Brown /*TEST 216c4762a1bSJed Brown 217c4762a1bSJed Brown test: 218c4762a1bSJed Brown # N=10 is divisible by nsize, to trigger Allgather/Gather in SF 219f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 220f424265bSStefano Zampini requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION) 221c4762a1bSJed Brown nsize: 2 222c4762a1bSJed Brown args: -op replace 223c4762a1bSJed Brown 224c4762a1bSJed Brown test: 225c4762a1bSJed Brown suffix: 2 226c4762a1bSJed Brown nsize: 2 227c4762a1bSJed Brown args: -op sum 228c4762a1bSJed Brown 229c4762a1bSJed Brown # N=10 is not divisible by nsize, to trigger Allgatherv/Gatherv in SF 230c4762a1bSJed Brown test: 231f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 232f424265bSStefano Zampini requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION) 233c4762a1bSJed Brown suffix: 3 234c4762a1bSJed Brown nsize: 3 235c4762a1bSJed Brown args: -op replace 236c4762a1bSJed Brown 237c4762a1bSJed Brown test: 238c4762a1bSJed Brown suffix: 4 239c4762a1bSJed Brown nsize: 3 240c4762a1bSJed Brown args: -op sum 241c4762a1bSJed Brown 242c4762a1bSJed Brown TEST*/ 243