xref: /petsc/src/vec/is/sf/tests/ex3.c (revision 327415f76d85372a4417cf1aaa14db707d4d6c04)
1c4762a1bSJed Brown static char help[]= "Test PetscSFFetchAndOp on patterned SF graphs. PetscSFFetchAndOp internally uses PetscSFBcastAndOp \n\
2c4762a1bSJed Brown  and PetscSFReduce. So it is a good test to see if they all work for patterned graphs.\n\
3c4762a1bSJed Brown  Run with ./prog -op [replace | sum]\n\n";
4c4762a1bSJed Brown 
5c4762a1bSJed Brown #include <petscvec.h>
6c4762a1bSJed Brown #include <petscsf.h>
7c4762a1bSJed Brown int main(int argc,char **argv)
8c4762a1bSJed Brown {
9c4762a1bSJed Brown   PetscInt       i,N=10,low,high,nleaves;
10c4762a1bSJed Brown   PetscMPIInt    size,rank;
11c4762a1bSJed Brown   Vec            x,y,y2,gy2;
12c4762a1bSJed Brown   PetscScalar    *rootdata,*leafdata,*leafupdate;
13c4762a1bSJed Brown   PetscLayout    layout;
14c4762a1bSJed Brown   PetscSF        gathersf,allgathersf,alltoallsf;
15c4762a1bSJed Brown   MPI_Op         op=MPI_SUM;
16c4762a1bSJed Brown   char           opname[64];
17c4762a1bSJed Brown   const char     *mpiopname;
18c4762a1bSJed Brown   PetscBool      flag,isreplace,issum;
19c4762a1bSJed Brown 
20*327415f7SBarry Smith   PetscFunctionBeginUser;
219566063dSJacob Faibussowitsch   PetscCall(PetscInitialize(&argc,&argv,(char*)0,help));
229566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD,&size));
239566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD,&rank));
24c4762a1bSJed Brown 
259566063dSJacob Faibussowitsch   PetscCall(PetscOptionsGetString(NULL,NULL,"-op",opname,sizeof(opname),&flag));
269566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(opname,"replace",&isreplace));
279566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(opname,"sum",&issum));
28c4762a1bSJed Brown 
2983df288dSJunchao Zhang   if (isreplace)  {op = MPI_REPLACE; mpiopname = "MPI_REPLACE";}
30c4762a1bSJed Brown   else if (issum) {op = MPIU_SUM;     mpiopname = "MPI_SUM";}
3198921bdaSJacob Faibussowitsch   else SETERRQ(PETSC_COMM_WORLD,PETSC_ERR_ARG_WRONG,"Unsupported argument (%s) to -op, which must be 'replace' or 'sum'",opname);
32c4762a1bSJed Brown 
339566063dSJacob Faibussowitsch   PetscCall(VecCreate(PETSC_COMM_WORLD,&x));
349566063dSJacob Faibussowitsch   PetscCall(VecSetFromOptions(x));
359566063dSJacob Faibussowitsch   PetscCall(VecSetSizes(x,PETSC_DECIDE,N));
36c4762a1bSJed Brown 
37c4762a1bSJed Brown   /*-------------------------------------*/
38c4762a1bSJed Brown   /*       PETSCSF_PATTERN_GATHER        */
39c4762a1bSJed Brown   /*-------------------------------------*/
40c4762a1bSJed Brown 
41c4762a1bSJed Brown   /* set MPI vec x to [1, 2, .., N] */
429566063dSJacob Faibussowitsch   PetscCall(VecGetOwnershipRange(x,&low,&high));
439566063dSJacob Faibussowitsch   for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES));
449566063dSJacob Faibussowitsch   PetscCall(VecAssemblyBegin(x));
459566063dSJacob Faibussowitsch   PetscCall(VecAssemblyEnd(x));
46c4762a1bSJed Brown 
47c4762a1bSJed Brown   /* Create the gather SF */
489566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_GATHER graph with op = %s\n",mpiopname));
499566063dSJacob Faibussowitsch   PetscCall(VecGetLayout(x,&layout));
509566063dSJacob Faibussowitsch   PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&gathersf));
519566063dSJacob Faibussowitsch   PetscCall(PetscSFSetGraphWithPattern(gathersf,layout,PETSCSF_PATTERN_GATHER));
52c4762a1bSJed Brown 
53c4762a1bSJed Brown   /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */
549566063dSJacob Faibussowitsch   PetscCall(PetscSFGetGraph(gathersf,NULL,&nleaves,NULL,NULL));
559566063dSJacob Faibussowitsch   PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y));
569566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(y,&y2));
57c4762a1bSJed Brown 
589566063dSJacob Faibussowitsch   PetscCall(VecGetArray(x,&rootdata));
599566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y,&leafdata));
609566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y2,&leafupdate));
61c4762a1bSJed Brown 
62c4762a1bSJed Brown   /* Bcast x to y,to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */
639566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastBegin(gathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
649566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(gathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
659566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y,&leafdata));
669566063dSJacob Faibussowitsch   PetscCall(VecScale(y,2));
679566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y,&leafdata));
68c4762a1bSJed Brown 
69c4762a1bSJed Brown   /* FetchAndOp x to y */
709566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpBegin(gathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
719566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpEnd(gathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
72c4762a1bSJed Brown 
73c4762a1bSJed Brown   /* View roots (x) and leafupdate (y2). Since this is a gather graph, leafudpate = rootdata = [1,N], then rootdata += leafdata, i.e., [3,3*N] */
749566063dSJacob Faibussowitsch   PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2));
759566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)x,"rootdata"));
769566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate"));
77c4762a1bSJed Brown 
789566063dSJacob Faibussowitsch   PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD));
799566063dSJacob Faibussowitsch   PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD));
809566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&gy2));
81c4762a1bSJed Brown 
829566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y2,&leafupdate));
839566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y2));
84c4762a1bSJed Brown 
859566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y,&leafdata));
869566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y));
87c4762a1bSJed Brown 
889566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(x,&rootdata));
899566063dSJacob Faibussowitsch   /* PetscCall(VecDestroy(&x)); */ /* We will reuse x in ALLGATHER, so do not destroy it */
90c4762a1bSJed Brown 
919566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&gathersf));
92c4762a1bSJed Brown 
93c4762a1bSJed Brown   /*-------------------------------------*/
94c4762a1bSJed Brown   /*       PETSCSF_PATTERN_ALLGATHER     */
95c4762a1bSJed Brown   /*-------------------------------------*/
96c4762a1bSJed Brown 
97c4762a1bSJed Brown   /* set MPI vec x to [1, 2, .., N] */
989566063dSJacob Faibussowitsch   for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES));
999566063dSJacob Faibussowitsch   PetscCall(VecAssemblyBegin(x));
1009566063dSJacob Faibussowitsch   PetscCall(VecAssemblyEnd(x));
101c4762a1bSJed Brown 
102c4762a1bSJed Brown   /* Create the allgather SF */
1039566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLGATHER graph with op = %s\n",mpiopname));
1049566063dSJacob Faibussowitsch   PetscCall(VecGetLayout(x,&layout));
1059566063dSJacob Faibussowitsch   PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&allgathersf));
1069566063dSJacob Faibussowitsch   PetscCall(PetscSFSetGraphWithPattern(allgathersf,layout,PETSCSF_PATTERN_ALLGATHER));
107c4762a1bSJed Brown 
108c4762a1bSJed Brown   /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */
1099566063dSJacob Faibussowitsch   PetscCall(PetscSFGetGraph(allgathersf,NULL,&nleaves,NULL,NULL));
1109566063dSJacob Faibussowitsch   PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y));
1119566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(y,&y2));
112c4762a1bSJed Brown 
1139566063dSJacob Faibussowitsch   PetscCall(VecGetArray(x,&rootdata));
1149566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y,&leafdata));
1159566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y2,&leafupdate));
116c4762a1bSJed Brown 
117c4762a1bSJed Brown   /* Bcast x to y, to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */
1189566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastBegin(allgathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
1199566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(allgathersf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
1209566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y,&leafdata));
1219566063dSJacob Faibussowitsch   PetscCall(VecScale(y,2));
1229566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y,&leafdata));
123c4762a1bSJed Brown 
124c4762a1bSJed Brown   /* FetchAndOp x to y */
1259566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpBegin(allgathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
1269566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpEnd(allgathersf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
127c4762a1bSJed Brown 
128c4762a1bSJed Brown   /* View roots (x) and leafupdate (y2). Since this is an allgather graph, we have (suppose ranks get updates in ascending order)
129c4762a1bSJed Brown      rank 0: leafupdate = rootdata = [1,N],   rootdata += leafdata = [3,3*N]
130c4762a1bSJed Brown      rank 1: leafupdate = rootdata = [3,3*N], rootdata += leafdata = [5,5*N]
131c4762a1bSJed Brown      rank 2: leafupdate = rootdata = [5,5*N], rootdata += leafdata = [7,7*N]
132c4762a1bSJed Brown      ...
133c4762a1bSJed Brown    */
1349566063dSJacob Faibussowitsch   PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2));
1359566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)x,"rootdata"));
1369566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate"));
137c4762a1bSJed Brown 
1389566063dSJacob Faibussowitsch   PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD));
1399566063dSJacob Faibussowitsch   PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD));
1409566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&gy2));
141c4762a1bSJed Brown 
1429566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y2,&leafupdate));
1439566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y2));
144c4762a1bSJed Brown 
1459566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y,&leafdata));
1469566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y));
147c4762a1bSJed Brown 
1489566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(x,&rootdata));
1499566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&x)); /* We won't reuse x in ALLGATHER, so destroy it */
150c4762a1bSJed Brown 
1519566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&allgathersf));
152c4762a1bSJed Brown 
153c4762a1bSJed Brown   /*-------------------------------------*/
154c4762a1bSJed Brown   /*       PETSCSF_PATTERN_ALLTOALL     */
155c4762a1bSJed Brown   /*-------------------------------------*/
156c4762a1bSJed Brown 
1579566063dSJacob Faibussowitsch   PetscCall(VecCreate(PETSC_COMM_WORLD,&x));
1589566063dSJacob Faibussowitsch   PetscCall(VecSetFromOptions(x));
1599566063dSJacob Faibussowitsch   PetscCall(VecSetSizes(x,size,PETSC_DECIDE));
160c4762a1bSJed Brown 
161c4762a1bSJed Brown   /* set MPI vec x to [1, 2, .., size^2] */
1629566063dSJacob Faibussowitsch   PetscCall(VecGetOwnershipRange(x,&low,&high));
1639566063dSJacob Faibussowitsch   for (i=low; i<high; i++) PetscCall(VecSetValue(x,i,(PetscScalar)i+1.0,INSERT_VALUES));
1649566063dSJacob Faibussowitsch   PetscCall(VecAssemblyBegin(x));
1659566063dSJacob Faibussowitsch   PetscCall(VecAssemblyEnd(x));
166c4762a1bSJed Brown 
167c4762a1bSJed Brown /* Create the alltoall SF */
1689566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_WORLD,"\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLTOALL graph with op = %s\n",mpiopname));
1699566063dSJacob Faibussowitsch   PetscCall(PetscSFCreate(PETSC_COMM_WORLD,&alltoallsf));
1709566063dSJacob Faibussowitsch   PetscCall(PetscSFSetGraphWithPattern(alltoallsf,NULL/*insignificant*/,PETSCSF_PATTERN_ALLTOALL));
171c4762a1bSJed Brown 
172c4762a1bSJed Brown   /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */
1739566063dSJacob Faibussowitsch   PetscCall(PetscSFGetGraph(alltoallsf,NULL,&nleaves,NULL,NULL));
1749566063dSJacob Faibussowitsch   PetscCall(VecCreateSeq(PETSC_COMM_SELF,nleaves,&y));
1759566063dSJacob Faibussowitsch   PetscCall(VecDuplicate(y,&y2));
176c4762a1bSJed Brown 
1779566063dSJacob Faibussowitsch   PetscCall(VecGetArray(x,&rootdata));
1789566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y,&leafdata));
1799566063dSJacob Faibussowitsch   PetscCall(VecGetArray(y2,&leafupdate));
180c4762a1bSJed Brown 
181c4762a1bSJed Brown   /* Bcast x to y, to initialize y = 1+rank+size*i, with i=0..size-1 */
1829566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastBegin(alltoallsf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
1839566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(alltoallsf,MPIU_SCALAR,rootdata,leafdata,MPI_REPLACE));
184c4762a1bSJed Brown 
185c4762a1bSJed Brown   /* FetchAndOp x to y */
1869566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpBegin(alltoallsf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
1879566063dSJacob Faibussowitsch   PetscCall(PetscSFFetchAndOpEnd(alltoallsf,MPIU_SCALAR,rootdata,leafdata,leafupdate,op));
188c4762a1bSJed Brown 
189c4762a1bSJed Brown   /* View roots (x) and leafupdate (y2). Since this is an alltoall graph, each root has only one leaf.
190c4762a1bSJed Brown      So, leafupdate = rootdata = 1+rank+size*i, i=0..size-1; and rootdata += leafdata, i.e., rootdata = [2,2*N]
191c4762a1bSJed Brown    */
1929566063dSJacob Faibussowitsch   PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD,1,nleaves,PETSC_DECIDE,leafupdate,&gy2));
1939566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)x,"rootdata"));
1949566063dSJacob Faibussowitsch   PetscCall(PetscObjectSetName((PetscObject)gy2,"leafupdate"));
195c4762a1bSJed Brown 
1969566063dSJacob Faibussowitsch   PetscCall(VecView(x,PETSC_VIEWER_STDOUT_WORLD));
1979566063dSJacob Faibussowitsch   PetscCall(VecView(gy2,PETSC_VIEWER_STDOUT_WORLD));
1989566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&gy2));
199c4762a1bSJed Brown 
2009566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y2,&leafupdate));
2019566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y2));
202c4762a1bSJed Brown 
2039566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(y,&leafdata));
2049566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&y));
205c4762a1bSJed Brown 
2069566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(x,&rootdata));
2079566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&x));
208c4762a1bSJed Brown 
2099566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&alltoallsf));
210c4762a1bSJed Brown 
2119566063dSJacob Faibussowitsch   PetscCall(PetscFinalize());
212b122ec5aSJacob Faibussowitsch   return 0;
213c4762a1bSJed Brown }
214c4762a1bSJed Brown 
215c4762a1bSJed Brown /*TEST
216c4762a1bSJed Brown 
217c4762a1bSJed Brown    test:
218c4762a1bSJed Brown       # N=10 is divisible by nsize, to trigger Allgather/Gather in SF
219f424265bSStefano Zampini       #MPI_Sendrecv_replace is broken with 20210400300
220f424265bSStefano Zampini       requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION)
221c4762a1bSJed Brown       nsize: 2
222c4762a1bSJed Brown       args: -op replace
223c4762a1bSJed Brown 
224c4762a1bSJed Brown    test:
225c4762a1bSJed Brown       suffix: 2
226c4762a1bSJed Brown       nsize: 2
227c4762a1bSJed Brown       args: -op sum
228c4762a1bSJed Brown 
229c4762a1bSJed Brown    # N=10 is not divisible by nsize, to trigger Allgatherv/Gatherv in SF
230c4762a1bSJed Brown    test:
231f424265bSStefano Zampini       #MPI_Sendrecv_replace is broken with 20210400300
232f424265bSStefano Zampini       requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION)
233c4762a1bSJed Brown       suffix: 3
234c4762a1bSJed Brown       nsize: 3
235c4762a1bSJed Brown       args: -op replace
236c4762a1bSJed Brown 
237c4762a1bSJed Brown    test:
238c4762a1bSJed Brown       suffix: 4
239c4762a1bSJed Brown       nsize: 3
240c4762a1bSJed Brown       args: -op sum
241c4762a1bSJed Brown 
242c4762a1bSJed Brown TEST*/
243