1c4762a1bSJed Brown static char help[] = "Test PetscSFFetchAndOp on patterned SF graphs. PetscSFFetchAndOp internally uses PetscSFBcastAndOp \n\ 2c4762a1bSJed Brown and PetscSFReduce. So it is a good test to see if they all work for patterned graphs.\n\ 3c4762a1bSJed Brown Run with ./prog -op [replace | sum]\n\n"; 4c4762a1bSJed Brown 5c4762a1bSJed Brown #include <petscvec.h> 6c4762a1bSJed Brown #include <petscsf.h> 7d71ae5a4SJacob Faibussowitsch int main(int argc, char **argv) 8d71ae5a4SJacob Faibussowitsch { 9c4762a1bSJed Brown PetscInt i, N = 10, low, high, nleaves; 10c4762a1bSJed Brown PetscMPIInt size, rank; 11c4762a1bSJed Brown Vec x, y, y2, gy2; 12c4762a1bSJed Brown PetscScalar *rootdata, *leafdata, *leafupdate; 13c4762a1bSJed Brown PetscLayout layout; 14c4762a1bSJed Brown PetscSF gathersf, allgathersf, alltoallsf; 15c4762a1bSJed Brown MPI_Op op = MPI_SUM; 16c4762a1bSJed Brown char opname[64]; 17c4762a1bSJed Brown const char *mpiopname; 18c4762a1bSJed Brown PetscBool flag, isreplace, issum; 19c4762a1bSJed Brown 20327415f7SBarry Smith PetscFunctionBeginUser; 21*c8025a54SPierre Jolivet PetscCall(PetscInitialize(&argc, &argv, NULL, help)); 229566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size)); 239566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank)); 24c4762a1bSJed Brown 259566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-op", opname, sizeof(opname), &flag)); 269566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname, "replace", &isreplace)); 279566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname, "sum", &issum)); 28c4762a1bSJed Brown 299371c9d4SSatish Balay if (isreplace) { 309371c9d4SSatish Balay op = MPI_REPLACE; 319371c9d4SSatish Balay mpiopname = "MPI_REPLACE"; 329371c9d4SSatish Balay } else if (issum) { 339371c9d4SSatish Balay op = MPIU_SUM; 349371c9d4SSatish Balay mpiopname = "MPI_SUM"; 359371c9d4SSatish Balay } else SETERRQ(PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "Unsupported argument (%s) to -op, which must be 'replace' or 'sum'", opname); 36c4762a1bSJed Brown 379566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD, &x)); 389566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 399566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x, PETSC_DECIDE, N)); 40c4762a1bSJed Brown 41c4762a1bSJed Brown /*-------------------------------------*/ 42c4762a1bSJed Brown /* PETSCSF_PATTERN_GATHER */ 43c4762a1bSJed Brown /*-------------------------------------*/ 44c4762a1bSJed Brown 45c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 469566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &low, &high)); 479566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 489566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 499566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 50c4762a1bSJed Brown 51c4762a1bSJed Brown /* Create the gather SF */ 529566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_GATHER graph with op = %s\n", mpiopname)); 539566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x, &layout)); 549566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &gathersf)); 559566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(gathersf, layout, PETSCSF_PATTERN_GATHER)); 56c4762a1bSJed Brown 57c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 589566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(gathersf, NULL, &nleaves, NULL, NULL)); 599566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 609566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 61c4762a1bSJed Brown 629566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 639566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 649566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 65c4762a1bSJed Brown 66c4762a1bSJed Brown /* Bcast x to y,to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 679566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(gathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 689566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(gathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 699566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 709566063dSJacob Faibussowitsch PetscCall(VecScale(y, 2)); 719566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 72c4762a1bSJed Brown 73c4762a1bSJed Brown /* FetchAndOp x to y */ 749566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(gathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 759566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(gathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 76c4762a1bSJed Brown 77c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is a gather graph, leafudpate = rootdata = [1,N], then rootdata += leafdata, i.e., [3,3*N] */ 789566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 799566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 809566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 81c4762a1bSJed Brown 829566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 839566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 849566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 85c4762a1bSJed Brown 869566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 879566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 88c4762a1bSJed Brown 899566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 909566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 91c4762a1bSJed Brown 929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 939566063dSJacob Faibussowitsch /* PetscCall(VecDestroy(&x)); */ /* We will reuse x in ALLGATHER, so do not destroy it */ 94c4762a1bSJed Brown 959566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&gathersf)); 96c4762a1bSJed Brown 97c4762a1bSJed Brown /*-------------------------------------*/ 98c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLGATHER */ 99c4762a1bSJed Brown /*-------------------------------------*/ 100c4762a1bSJed Brown 101c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 1029566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 1039566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1049566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 105c4762a1bSJed Brown 106c4762a1bSJed Brown /* Create the allgather SF */ 1079566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLGATHER graph with op = %s\n", mpiopname)); 1089566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x, &layout)); 1099566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &allgathersf)); 1109566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(allgathersf, layout, PETSCSF_PATTERN_ALLGATHER)); 111c4762a1bSJed Brown 112c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1139566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(allgathersf, NULL, &nleaves, NULL, NULL)); 1149566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 1159566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 116c4762a1bSJed Brown 1179566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 1189566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 1199566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 120c4762a1bSJed Brown 121c4762a1bSJed Brown /* Bcast x to y, to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 1229566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(allgathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1239566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(allgathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1249566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 1259566063dSJacob Faibussowitsch PetscCall(VecScale(y, 2)); 1269566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 127c4762a1bSJed Brown 128c4762a1bSJed Brown /* FetchAndOp x to y */ 1299566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(allgathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 1309566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(allgathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 131c4762a1bSJed Brown 132c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an allgather graph, we have (suppose ranks get updates in ascending order) 133c4762a1bSJed Brown rank 0: leafupdate = rootdata = [1,N], rootdata += leafdata = [3,3*N] 134c4762a1bSJed Brown rank 1: leafupdate = rootdata = [3,3*N], rootdata += leafdata = [5,5*N] 135c4762a1bSJed Brown rank 2: leafupdate = rootdata = [5,5*N], rootdata += leafdata = [7,7*N] 136c4762a1bSJed Brown ... 137c4762a1bSJed Brown */ 1389566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 1399566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 1409566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 141c4762a1bSJed Brown 1429566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 1439566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 1449566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 145c4762a1bSJed Brown 1469566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 1479566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 148c4762a1bSJed Brown 1499566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 1509566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 151c4762a1bSJed Brown 1529566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 1539566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); /* We won't reuse x in ALLGATHER, so destroy it */ 154c4762a1bSJed Brown 1559566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&allgathersf)); 156c4762a1bSJed Brown 157c4762a1bSJed Brown /*-------------------------------------*/ 158c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLTOALL */ 159c4762a1bSJed Brown /*-------------------------------------*/ 160c4762a1bSJed Brown 1619566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD, &x)); 1629566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 1639566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x, size, PETSC_DECIDE)); 164c4762a1bSJed Brown 165c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., size^2] */ 1669566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &low, &high)); 1679566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 1689566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1699566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 170c4762a1bSJed Brown 171c4762a1bSJed Brown /* Create the alltoall SF */ 1729566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLTOALL graph with op = %s\n", mpiopname)); 1739566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &alltoallsf)); 1749566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(alltoallsf, NULL /*insignificant*/, PETSCSF_PATTERN_ALLTOALL)); 175c4762a1bSJed Brown 176c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1779566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(alltoallsf, NULL, &nleaves, NULL, NULL)); 1789566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 1799566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 180c4762a1bSJed Brown 1819566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 1829566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 1839566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 184c4762a1bSJed Brown 185c4762a1bSJed Brown /* Bcast x to y, to initialize y = 1+rank+size*i, with i=0..size-1 */ 1869566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(alltoallsf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1879566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(alltoallsf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 188c4762a1bSJed Brown 189c4762a1bSJed Brown /* FetchAndOp x to y */ 1909566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(alltoallsf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 1919566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(alltoallsf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 192c4762a1bSJed Brown 193c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an alltoall graph, each root has only one leaf. 194c4762a1bSJed Brown So, leafupdate = rootdata = 1+rank+size*i, i=0..size-1; and rootdata += leafdata, i.e., rootdata = [2,2*N] 195c4762a1bSJed Brown */ 1969566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 1979566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 1989566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 199c4762a1bSJed Brown 2009566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 2019566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 2029566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 203c4762a1bSJed Brown 2049566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 2059566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 206c4762a1bSJed Brown 2079566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 2089566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 209c4762a1bSJed Brown 2109566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 2119566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 212c4762a1bSJed Brown 2139566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&alltoallsf)); 214c4762a1bSJed Brown 2159566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 216b122ec5aSJacob Faibussowitsch return 0; 217c4762a1bSJed Brown } 218c4762a1bSJed Brown 219c4762a1bSJed Brown /*TEST 220c4762a1bSJed Brown 221c4762a1bSJed Brown test: 222c4762a1bSJed Brown # N=10 is divisible by nsize, to trigger Allgather/Gather in SF 223f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 2240f85934cSJunchao Zhang requires: !defined(PETSC_HAVE_I_MPI) 225c4762a1bSJed Brown nsize: 2 226c4762a1bSJed Brown args: -op replace 227c4762a1bSJed Brown 228c4762a1bSJed Brown test: 229c4762a1bSJed Brown suffix: 2 230c4762a1bSJed Brown nsize: 2 231c4762a1bSJed Brown args: -op sum 232c4762a1bSJed Brown 233c4762a1bSJed Brown # N=10 is not divisible by nsize, to trigger Allgatherv/Gatherv in SF 234c4762a1bSJed Brown test: 235f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 2360f85934cSJunchao Zhang requires: !defined(PETSC_HAVE_I_MPI) 237c4762a1bSJed Brown suffix: 3 238c4762a1bSJed Brown nsize: 3 239c4762a1bSJed Brown args: -op replace 240c4762a1bSJed Brown 241c4762a1bSJed Brown test: 242c4762a1bSJed Brown suffix: 4 243c4762a1bSJed Brown nsize: 3 244c4762a1bSJed Brown args: -op sum 245c4762a1bSJed Brown 246c4762a1bSJed Brown TEST*/ 247