1c4762a1bSJed Brown static char help[] = "Test PetscSFFetchAndOp on patterned SF graphs. PetscSFFetchAndOp internally uses PetscSFBcastAndOp \n\ 2c4762a1bSJed Brown and PetscSFReduce. So it is a good test to see if they all work for patterned graphs.\n\ 3c4762a1bSJed Brown Run with ./prog -op [replace | sum]\n\n"; 4c4762a1bSJed Brown 5c4762a1bSJed Brown #include <petscvec.h> 6c4762a1bSJed Brown #include <petscsf.h> 7*9371c9d4SSatish Balay int main(int argc, char **argv) { 8c4762a1bSJed Brown PetscInt i, N = 10, low, high, nleaves; 9c4762a1bSJed Brown PetscMPIInt size, rank; 10c4762a1bSJed Brown Vec x, y, y2, gy2; 11c4762a1bSJed Brown PetscScalar *rootdata, *leafdata, *leafupdate; 12c4762a1bSJed Brown PetscLayout layout; 13c4762a1bSJed Brown PetscSF gathersf, allgathersf, alltoallsf; 14c4762a1bSJed Brown MPI_Op op = MPI_SUM; 15c4762a1bSJed Brown char opname[64]; 16c4762a1bSJed Brown const char *mpiopname; 17c4762a1bSJed Brown PetscBool flag, isreplace, issum; 18c4762a1bSJed Brown 19327415f7SBarry Smith PetscFunctionBeginUser; 209566063dSJacob Faibussowitsch PetscCall(PetscInitialize(&argc, &argv, (char *)0, help)); 219566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PETSC_COMM_WORLD, &size)); 229566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank)); 23c4762a1bSJed Brown 249566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetString(NULL, NULL, "-op", opname, sizeof(opname), &flag)); 259566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname, "replace", &isreplace)); 269566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(opname, "sum", &issum)); 27c4762a1bSJed Brown 28*9371c9d4SSatish Balay if (isreplace) { 29*9371c9d4SSatish Balay op = MPI_REPLACE; 30*9371c9d4SSatish Balay mpiopname = "MPI_REPLACE"; 31*9371c9d4SSatish Balay } else if (issum) { 32*9371c9d4SSatish Balay op = MPIU_SUM; 33*9371c9d4SSatish Balay mpiopname = "MPI_SUM"; 34*9371c9d4SSatish Balay } else SETERRQ(PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "Unsupported argument (%s) to -op, which must be 'replace' or 'sum'", opname); 35c4762a1bSJed Brown 369566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD, &x)); 379566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 389566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x, PETSC_DECIDE, N)); 39c4762a1bSJed Brown 40c4762a1bSJed Brown /*-------------------------------------*/ 41c4762a1bSJed Brown /* PETSCSF_PATTERN_GATHER */ 42c4762a1bSJed Brown /*-------------------------------------*/ 43c4762a1bSJed Brown 44c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 459566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &low, &high)); 469566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 479566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 489566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 49c4762a1bSJed Brown 50c4762a1bSJed Brown /* Create the gather SF */ 519566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_GATHER graph with op = %s\n", mpiopname)); 529566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x, &layout)); 539566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &gathersf)); 549566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(gathersf, layout, PETSCSF_PATTERN_GATHER)); 55c4762a1bSJed Brown 56c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 579566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(gathersf, NULL, &nleaves, NULL, NULL)); 589566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 599566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 60c4762a1bSJed Brown 619566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 629566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 639566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 64c4762a1bSJed Brown 65c4762a1bSJed Brown /* Bcast x to y,to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 669566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(gathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 679566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(gathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 689566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 699566063dSJacob Faibussowitsch PetscCall(VecScale(y, 2)); 709566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 71c4762a1bSJed Brown 72c4762a1bSJed Brown /* FetchAndOp x to y */ 739566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(gathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 749566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(gathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 75c4762a1bSJed Brown 76c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is a gather graph, leafudpate = rootdata = [1,N], then rootdata += leafdata, i.e., [3,3*N] */ 779566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 789566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 799566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 80c4762a1bSJed Brown 819566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 829566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 839566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 84c4762a1bSJed Brown 859566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 869566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 87c4762a1bSJed Brown 889566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 899566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 90c4762a1bSJed Brown 919566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 929566063dSJacob Faibussowitsch /* PetscCall(VecDestroy(&x)); */ /* We will reuse x in ALLGATHER, so do not destroy it */ 93c4762a1bSJed Brown 949566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&gathersf)); 95c4762a1bSJed Brown 96c4762a1bSJed Brown /*-------------------------------------*/ 97c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLGATHER */ 98c4762a1bSJed Brown /*-------------------------------------*/ 99c4762a1bSJed Brown 100c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., N] */ 1019566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 1029566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1039566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 104c4762a1bSJed Brown 105c4762a1bSJed Brown /* Create the allgather SF */ 1069566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLGATHER graph with op = %s\n", mpiopname)); 1079566063dSJacob Faibussowitsch PetscCall(VecGetLayout(x, &layout)); 1089566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &allgathersf)); 1099566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(allgathersf, layout, PETSCSF_PATTERN_ALLGATHER)); 110c4762a1bSJed Brown 111c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1129566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(allgathersf, NULL, &nleaves, NULL, NULL)); 1139566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 1149566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 115c4762a1bSJed Brown 1169566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 1179566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 1189566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 119c4762a1bSJed Brown 120c4762a1bSJed Brown /* Bcast x to y, to initialize y = [1,N], then scale y to make leafupdate = y = [2,2*N] */ 1219566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(allgathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1229566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(allgathersf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1239566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 1249566063dSJacob Faibussowitsch PetscCall(VecScale(y, 2)); 1259566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 126c4762a1bSJed Brown 127c4762a1bSJed Brown /* FetchAndOp x to y */ 1289566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(allgathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 1299566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(allgathersf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 130c4762a1bSJed Brown 131c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an allgather graph, we have (suppose ranks get updates in ascending order) 132c4762a1bSJed Brown rank 0: leafupdate = rootdata = [1,N], rootdata += leafdata = [3,3*N] 133c4762a1bSJed Brown rank 1: leafupdate = rootdata = [3,3*N], rootdata += leafdata = [5,5*N] 134c4762a1bSJed Brown rank 2: leafupdate = rootdata = [5,5*N], rootdata += leafdata = [7,7*N] 135c4762a1bSJed Brown ... 136c4762a1bSJed Brown */ 1379566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 1389566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 1399566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 140c4762a1bSJed Brown 1419566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 1429566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 1439566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 144c4762a1bSJed Brown 1459566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 1469566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 147c4762a1bSJed Brown 1489566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 1499566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 150c4762a1bSJed Brown 1519566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 1529566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); /* We won't reuse x in ALLGATHER, so destroy it */ 153c4762a1bSJed Brown 1549566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&allgathersf)); 155c4762a1bSJed Brown 156c4762a1bSJed Brown /*-------------------------------------*/ 157c4762a1bSJed Brown /* PETSCSF_PATTERN_ALLTOALL */ 158c4762a1bSJed Brown /*-------------------------------------*/ 159c4762a1bSJed Brown 1609566063dSJacob Faibussowitsch PetscCall(VecCreate(PETSC_COMM_WORLD, &x)); 1619566063dSJacob Faibussowitsch PetscCall(VecSetFromOptions(x)); 1629566063dSJacob Faibussowitsch PetscCall(VecSetSizes(x, size, PETSC_DECIDE)); 163c4762a1bSJed Brown 164c4762a1bSJed Brown /* set MPI vec x to [1, 2, .., size^2] */ 1659566063dSJacob Faibussowitsch PetscCall(VecGetOwnershipRange(x, &low, &high)); 1669566063dSJacob Faibussowitsch for (i = low; i < high; i++) PetscCall(VecSetValue(x, i, (PetscScalar)i + 1.0, INSERT_VALUES)); 1679566063dSJacob Faibussowitsch PetscCall(VecAssemblyBegin(x)); 1689566063dSJacob Faibussowitsch PetscCall(VecAssemblyEnd(x)); 169c4762a1bSJed Brown 170c4762a1bSJed Brown /* Create the alltoall SF */ 1719566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\nTesting PetscSFFetchAndOp on a PETSCSF_PATTERN_ALLTOALL graph with op = %s\n", mpiopname)); 1729566063dSJacob Faibussowitsch PetscCall(PetscSFCreate(PETSC_COMM_WORLD, &alltoallsf)); 1739566063dSJacob Faibussowitsch PetscCall(PetscSFSetGraphWithPattern(alltoallsf, NULL /*insignificant*/, PETSCSF_PATTERN_ALLTOALL)); 174c4762a1bSJed Brown 175c4762a1bSJed Brown /* Create the leaf vector y (seq vector) and its duplicate y2 working as leafupdate */ 1769566063dSJacob Faibussowitsch PetscCall(PetscSFGetGraph(alltoallsf, NULL, &nleaves, NULL, NULL)); 1779566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, nleaves, &y)); 1789566063dSJacob Faibussowitsch PetscCall(VecDuplicate(y, &y2)); 179c4762a1bSJed Brown 1809566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &rootdata)); 1819566063dSJacob Faibussowitsch PetscCall(VecGetArray(y, &leafdata)); 1829566063dSJacob Faibussowitsch PetscCall(VecGetArray(y2, &leafupdate)); 183c4762a1bSJed Brown 184c4762a1bSJed Brown /* Bcast x to y, to initialize y = 1+rank+size*i, with i=0..size-1 */ 1859566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(alltoallsf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 1869566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(alltoallsf, MPIU_SCALAR, rootdata, leafdata, MPI_REPLACE)); 187c4762a1bSJed Brown 188c4762a1bSJed Brown /* FetchAndOp x to y */ 1899566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpBegin(alltoallsf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 1909566063dSJacob Faibussowitsch PetscCall(PetscSFFetchAndOpEnd(alltoallsf, MPIU_SCALAR, rootdata, leafdata, leafupdate, op)); 191c4762a1bSJed Brown 192c4762a1bSJed Brown /* View roots (x) and leafupdate (y2). Since this is an alltoall graph, each root has only one leaf. 193c4762a1bSJed Brown So, leafupdate = rootdata = 1+rank+size*i, i=0..size-1; and rootdata += leafdata, i.e., rootdata = [2,2*N] 194c4762a1bSJed Brown */ 1959566063dSJacob Faibussowitsch PetscCall(VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, nleaves, PETSC_DECIDE, leafupdate, &gy2)); 1969566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)x, "rootdata")); 1979566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)gy2, "leafupdate")); 198c4762a1bSJed Brown 1999566063dSJacob Faibussowitsch PetscCall(VecView(x, PETSC_VIEWER_STDOUT_WORLD)); 2009566063dSJacob Faibussowitsch PetscCall(VecView(gy2, PETSC_VIEWER_STDOUT_WORLD)); 2019566063dSJacob Faibussowitsch PetscCall(VecDestroy(&gy2)); 202c4762a1bSJed Brown 2039566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y2, &leafupdate)); 2049566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y2)); 205c4762a1bSJed Brown 2069566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(y, &leafdata)); 2079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&y)); 208c4762a1bSJed Brown 2099566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &rootdata)); 2109566063dSJacob Faibussowitsch PetscCall(VecDestroy(&x)); 211c4762a1bSJed Brown 2129566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&alltoallsf)); 213c4762a1bSJed Brown 2149566063dSJacob Faibussowitsch PetscCall(PetscFinalize()); 215b122ec5aSJacob Faibussowitsch return 0; 216c4762a1bSJed Brown } 217c4762a1bSJed Brown 218c4762a1bSJed Brown /*TEST 219c4762a1bSJed Brown 220c4762a1bSJed Brown test: 221c4762a1bSJed Brown # N=10 is divisible by nsize, to trigger Allgather/Gather in SF 222f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 223f424265bSStefano Zampini requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION) 224c4762a1bSJed Brown nsize: 2 225c4762a1bSJed Brown args: -op replace 226c4762a1bSJed Brown 227c4762a1bSJed Brown test: 228c4762a1bSJed Brown suffix: 2 229c4762a1bSJed Brown nsize: 2 230c4762a1bSJed Brown args: -op sum 231c4762a1bSJed Brown 232c4762a1bSJed Brown # N=10 is not divisible by nsize, to trigger Allgatherv/Gatherv in SF 233c4762a1bSJed Brown test: 234f424265bSStefano Zampini #MPI_Sendrecv_replace is broken with 20210400300 235f424265bSStefano Zampini requires: !defined(PETSC_HAVE_I_MPI_NUMVERSION) 236c4762a1bSJed Brown suffix: 3 237c4762a1bSJed Brown nsize: 3 238c4762a1bSJed Brown args: -op replace 239c4762a1bSJed Brown 240c4762a1bSJed Brown test: 241c4762a1bSJed Brown suffix: 4 242c4762a1bSJed Brown nsize: 3 243c4762a1bSJed Brown args: -op sum 244c4762a1bSJed Brown 245c4762a1bSJed Brown TEST*/ 246