12362add9SBarry Smith 2af0996ceSBarry Smith #include <petsc/private/isimpl.h> /*I "petscis.h" I*/ 3e8f14785SLisandro Dalcin #include <petsc/private/hashmapi.h> 40c312b8eSJed Brown #include <petscsf.h> 5665c2dedSJed Brown #include <petscviewer.h> 62362add9SBarry Smith 77087cfbeSBarry Smith PetscClassId IS_LTOGM_CLASSID; 8268a049cSStefano Zampini static PetscErrorCode ISLocalToGlobalMappingGetBlockInfo_Private(ISLocalToGlobalMapping,PetscInt*,PetscInt**,PetscInt**,PetscInt***); 98e58c17dSMatthew Knepley 10413f72f0SBarry Smith typedef struct { 11413f72f0SBarry Smith PetscInt *globals; 12413f72f0SBarry Smith } ISLocalToGlobalMapping_Basic; 13413f72f0SBarry Smith 14413f72f0SBarry Smith typedef struct { 15e8f14785SLisandro Dalcin PetscHMapI globalht; 16413f72f0SBarry Smith } ISLocalToGlobalMapping_Hash; 17413f72f0SBarry Smith 186528b96dSMatthew G. Knepley /*@C 196528b96dSMatthew G. Knepley ISGetPointRange - Returns a description of the points in an IS suitable for traversal 20413f72f0SBarry Smith 216528b96dSMatthew G. Knepley Not collective 226528b96dSMatthew G. Knepley 236528b96dSMatthew G. Knepley Input Parameter: 246528b96dSMatthew G. Knepley . pointIS - The IS object 256528b96dSMatthew G. Knepley 266528b96dSMatthew G. Knepley Output Parameters: 276528b96dSMatthew G. Knepley + pStart - The first index, see notes 286528b96dSMatthew G. Knepley . pEnd - One past the last index, see notes 296528b96dSMatthew G. Knepley - points - The indices, see notes 306528b96dSMatthew G. Knepley 316528b96dSMatthew G. Knepley Notes: 326528b96dSMatthew G. Knepley If the IS contains contiguous indices in an ISSTRIDE, then the indices are contained in [pStart, pEnd) and points = NULL. Otherwise, pStart = 0, pEnd = numIndices, and points is an array of the indices. This supports the following pattern 336528b96dSMatthew G. Knepley $ ISGetPointRange(is, &pStart, &pEnd, &points); 346528b96dSMatthew G. Knepley $ for (p = pStart; p < pEnd; ++p) { 356528b96dSMatthew G. Knepley $ const PetscInt point = points ? points[p] : p; 366528b96dSMatthew G. Knepley $ } 376528b96dSMatthew G. Knepley $ ISRestorePointRange(is, &pstart, &pEnd, &points); 386528b96dSMatthew G. Knepley 396528b96dSMatthew G. Knepley Level: intermediate 406528b96dSMatthew G. Knepley 416528b96dSMatthew G. Knepley .seealso: ISRestorePointRange(), ISGetPointSubrange(), ISGetIndices(), ISCreateStride() 426528b96dSMatthew G. Knepley @*/ 439305a4c7SMatthew G. Knepley PetscErrorCode ISGetPointRange(IS pointIS, PetscInt *pStart, PetscInt *pEnd, const PetscInt **points) 449305a4c7SMatthew G. Knepley { 459305a4c7SMatthew G. Knepley PetscInt numCells, step = 1; 469305a4c7SMatthew G. Knepley PetscBool isStride; 479305a4c7SMatthew G. Knepley 489305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 499305a4c7SMatthew G. Knepley *pStart = 0; 509305a4c7SMatthew G. Knepley *points = NULL; 519566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(pointIS, &numCells)); 529566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject) pointIS, ISSTRIDE, &isStride)); 539566063dSJacob Faibussowitsch if (isStride) PetscCall(ISStrideGetInfo(pointIS, pStart, &step)); 549305a4c7SMatthew G. Knepley *pEnd = *pStart + numCells; 559566063dSJacob Faibussowitsch if (!isStride || step != 1) PetscCall(ISGetIndices(pointIS, points)); 569305a4c7SMatthew G. Knepley PetscFunctionReturn(0); 579305a4c7SMatthew G. Knepley } 589305a4c7SMatthew G. Knepley 596528b96dSMatthew G. Knepley /*@C 606528b96dSMatthew G. Knepley ISRestorePointRange - Destroys the traversal description 616528b96dSMatthew G. Knepley 626528b96dSMatthew G. Knepley Not collective 636528b96dSMatthew G. Knepley 646528b96dSMatthew G. Knepley Input Parameters: 656528b96dSMatthew G. Knepley + pointIS - The IS object 666528b96dSMatthew G. Knepley . pStart - The first index, from ISGetPointRange() 676528b96dSMatthew G. Knepley . pEnd - One past the last index, from ISGetPointRange() 686528b96dSMatthew G. Knepley - points - The indices, from ISGetPointRange() 696528b96dSMatthew G. Knepley 706528b96dSMatthew G. Knepley Notes: 716528b96dSMatthew G. Knepley If the IS contains contiguous indices in an ISSTRIDE, then the indices are contained in [pStart, pEnd) and points = NULL. Otherwise, pStart = 0, pEnd = numIndices, and points is an array of the indices. This supports the following pattern 726528b96dSMatthew G. Knepley $ ISGetPointRange(is, &pStart, &pEnd, &points); 736528b96dSMatthew G. Knepley $ for (p = pStart; p < pEnd; ++p) { 746528b96dSMatthew G. Knepley $ const PetscInt point = points ? points[p] : p; 756528b96dSMatthew G. Knepley $ } 766528b96dSMatthew G. Knepley $ ISRestorePointRange(is, &pstart, &pEnd, &points); 776528b96dSMatthew G. Knepley 786528b96dSMatthew G. Knepley Level: intermediate 796528b96dSMatthew G. Knepley 806528b96dSMatthew G. Knepley .seealso: ISGetPointRange(), ISGetPointSubrange(), ISGetIndices(), ISCreateStride() 816528b96dSMatthew G. Knepley @*/ 829305a4c7SMatthew G. Knepley PetscErrorCode ISRestorePointRange(IS pointIS, PetscInt *pStart, PetscInt *pEnd, const PetscInt **points) 839305a4c7SMatthew G. Knepley { 849305a4c7SMatthew G. Knepley PetscInt step = 1; 859305a4c7SMatthew G. Knepley PetscBool isStride; 869305a4c7SMatthew G. Knepley 879305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 889566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject) pointIS, ISSTRIDE, &isStride)); 899566063dSJacob Faibussowitsch if (isStride) PetscCall(ISStrideGetInfo(pointIS, pStart, &step)); 909566063dSJacob Faibussowitsch if (!isStride || step != 1) PetscCall(ISGetIndices(pointIS, points)); 919305a4c7SMatthew G. Knepley PetscFunctionReturn(0); 929305a4c7SMatthew G. Knepley } 939305a4c7SMatthew G. Knepley 946528b96dSMatthew G. Knepley /*@C 956528b96dSMatthew G. Knepley ISGetPointSubrange - Configures the input IS to be a subrange for the traversal information given 966528b96dSMatthew G. Knepley 976528b96dSMatthew G. Knepley Not collective 986528b96dSMatthew G. Knepley 996528b96dSMatthew G. Knepley Input Parameters: 1006528b96dSMatthew G. Knepley + subpointIS - The IS object to be configured 1016528b96dSMatthew G. Knepley . pStar t - The first index of the subrange 1026528b96dSMatthew G. Knepley . pEnd - One past the last index for the subrange 1036528b96dSMatthew G. Knepley - points - The indices for the entire range, from ISGetPointRange() 1046528b96dSMatthew G. Knepley 1056528b96dSMatthew G. Knepley Output Parameters: 1066528b96dSMatthew G. Knepley . subpointIS - The IS object now configured to be a subrange 1076528b96dSMatthew G. Knepley 1086528b96dSMatthew G. Knepley Notes: 1096528b96dSMatthew G. Knepley The input IS will now respond properly to calls to ISGetPointRange() and return the subrange. 1106528b96dSMatthew G. Knepley 1116528b96dSMatthew G. Knepley Level: intermediate 1126528b96dSMatthew G. Knepley 1136528b96dSMatthew G. Knepley .seealso: ISGetPointRange(), ISRestorePointRange(), ISGetIndices(), ISCreateStride() 1146528b96dSMatthew G. Knepley @*/ 1159305a4c7SMatthew G. Knepley PetscErrorCode ISGetPointSubrange(IS subpointIS, PetscInt pStart, PetscInt pEnd, const PetscInt *points) 1169305a4c7SMatthew G. Knepley { 1179305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 1189305a4c7SMatthew G. Knepley if (points) { 1199566063dSJacob Faibussowitsch PetscCall(ISSetType(subpointIS, ISGENERAL)); 1209566063dSJacob Faibussowitsch PetscCall(ISGeneralSetIndices(subpointIS, pEnd-pStart, &points[pStart], PETSC_USE_POINTER)); 1219305a4c7SMatthew G. Knepley } else { 1229566063dSJacob Faibussowitsch PetscCall(ISSetType(subpointIS, ISSTRIDE)); 1239566063dSJacob Faibussowitsch PetscCall(ISStrideSetStride(subpointIS, pEnd-pStart, pStart, 1)); 1249305a4c7SMatthew G. Knepley } 1259305a4c7SMatthew G. Knepley PetscFunctionReturn(0); 1269305a4c7SMatthew G. Knepley } 1279305a4c7SMatthew G. Knepley 128413f72f0SBarry Smith /* -----------------------------------------------------------------------------------------*/ 129413f72f0SBarry Smith 130413f72f0SBarry Smith /* 131413f72f0SBarry Smith Creates the global mapping information in the ISLocalToGlobalMapping structure 132413f72f0SBarry Smith 133413f72f0SBarry Smith If the user has not selected how to handle the global to local mapping then use HASH for "large" problems 134413f72f0SBarry Smith */ 135413f72f0SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp(ISLocalToGlobalMapping mapping) 136413f72f0SBarry Smith { 137413f72f0SBarry Smith PetscInt i,*idx = mapping->indices,n = mapping->n,end,start; 138413f72f0SBarry Smith 139413f72f0SBarry Smith PetscFunctionBegin; 140413f72f0SBarry Smith if (mapping->data) PetscFunctionReturn(0); 141413f72f0SBarry Smith end = 0; 142413f72f0SBarry Smith start = PETSC_MAX_INT; 143413f72f0SBarry Smith 144413f72f0SBarry Smith for (i=0; i<n; i++) { 145413f72f0SBarry Smith if (idx[i] < 0) continue; 146413f72f0SBarry Smith if (idx[i] < start) start = idx[i]; 147413f72f0SBarry Smith if (idx[i] > end) end = idx[i]; 148413f72f0SBarry Smith } 149413f72f0SBarry Smith if (start > end) {start = 0; end = -1;} 150413f72f0SBarry Smith mapping->globalstart = start; 151413f72f0SBarry Smith mapping->globalend = end; 152413f72f0SBarry Smith if (!((PetscObject)mapping)->type_name) { 153413f72f0SBarry Smith if ((end - start) > PetscMax(4*n,1000000)) { 1549566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(mapping,ISLOCALTOGLOBALMAPPINGHASH)); 155413f72f0SBarry Smith } else { 1569566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(mapping,ISLOCALTOGLOBALMAPPINGBASIC)); 157413f72f0SBarry Smith } 158413f72f0SBarry Smith } 1599566063dSJacob Faibussowitsch if (mapping->ops->globaltolocalmappingsetup) PetscCall((*mapping->ops->globaltolocalmappingsetup)(mapping)); 160413f72f0SBarry Smith PetscFunctionReturn(0); 161413f72f0SBarry Smith } 162413f72f0SBarry Smith 163413f72f0SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Basic(ISLocalToGlobalMapping mapping) 164413f72f0SBarry Smith { 165413f72f0SBarry Smith PetscInt i,*idx = mapping->indices,n = mapping->n,end,start,*globals; 166413f72f0SBarry Smith ISLocalToGlobalMapping_Basic *map; 167413f72f0SBarry Smith 168413f72f0SBarry Smith PetscFunctionBegin; 169413f72f0SBarry Smith start = mapping->globalstart; 170413f72f0SBarry Smith end = mapping->globalend; 1719566063dSJacob Faibussowitsch PetscCall(PetscNew(&map)); 1729566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(end-start+2,&globals)); 173413f72f0SBarry Smith map->globals = globals; 174413f72f0SBarry Smith for (i=0; i<end-start+1; i++) globals[i] = -1; 175413f72f0SBarry Smith for (i=0; i<n; i++) { 176413f72f0SBarry Smith if (idx[i] < 0) continue; 177413f72f0SBarry Smith globals[idx[i] - start] = i; 178413f72f0SBarry Smith } 179413f72f0SBarry Smith mapping->data = (void*)map; 1809566063dSJacob Faibussowitsch PetscCall(PetscLogObjectMemory((PetscObject)mapping,(end-start+1)*sizeof(PetscInt))); 181413f72f0SBarry Smith PetscFunctionReturn(0); 182413f72f0SBarry Smith } 183413f72f0SBarry Smith 184413f72f0SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Hash(ISLocalToGlobalMapping mapping) 185413f72f0SBarry Smith { 186413f72f0SBarry Smith PetscInt i,*idx = mapping->indices,n = mapping->n; 187413f72f0SBarry Smith ISLocalToGlobalMapping_Hash *map; 188413f72f0SBarry Smith 189413f72f0SBarry Smith PetscFunctionBegin; 1909566063dSJacob Faibussowitsch PetscCall(PetscNew(&map)); 1919566063dSJacob Faibussowitsch PetscCall(PetscHMapICreate(&map->globalht)); 192413f72f0SBarry Smith for (i=0; i<n; i++) { 193413f72f0SBarry Smith if (idx[i] < 0) continue; 1949566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(map->globalht,idx[i],i)); 195413f72f0SBarry Smith } 196413f72f0SBarry Smith mapping->data = (void*)map; 1979566063dSJacob Faibussowitsch PetscCall(PetscLogObjectMemory((PetscObject)mapping,2*n*sizeof(PetscInt))); 198413f72f0SBarry Smith PetscFunctionReturn(0); 199413f72f0SBarry Smith } 200413f72f0SBarry Smith 201413f72f0SBarry Smith static PetscErrorCode ISLocalToGlobalMappingDestroy_Basic(ISLocalToGlobalMapping mapping) 202413f72f0SBarry Smith { 203413f72f0SBarry Smith ISLocalToGlobalMapping_Basic *map = (ISLocalToGlobalMapping_Basic *)mapping->data; 204413f72f0SBarry Smith 205413f72f0SBarry Smith PetscFunctionBegin; 206413f72f0SBarry Smith if (!map) PetscFunctionReturn(0); 2079566063dSJacob Faibussowitsch PetscCall(PetscFree(map->globals)); 2089566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->data)); 209413f72f0SBarry Smith PetscFunctionReturn(0); 210413f72f0SBarry Smith } 211413f72f0SBarry Smith 212413f72f0SBarry Smith static PetscErrorCode ISLocalToGlobalMappingDestroy_Hash(ISLocalToGlobalMapping mapping) 213413f72f0SBarry Smith { 214413f72f0SBarry Smith ISLocalToGlobalMapping_Hash *map = (ISLocalToGlobalMapping_Hash*)mapping->data; 215413f72f0SBarry Smith 216413f72f0SBarry Smith PetscFunctionBegin; 217413f72f0SBarry Smith if (!map) PetscFunctionReturn(0); 2189566063dSJacob Faibussowitsch PetscCall(PetscHMapIDestroy(&map->globalht)); 2199566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->data)); 220413f72f0SBarry Smith PetscFunctionReturn(0); 221413f72f0SBarry Smith } 222413f72f0SBarry Smith 223413f72f0SBarry Smith #define GTOLTYPE _Basic 224413f72f0SBarry Smith #define GTOLNAME _Basic 225541bf97eSAdrian Croucher #define GTOLBS mapping->bs 226413f72f0SBarry Smith #define GTOL(g, local) do { \ 227413f72f0SBarry Smith local = map->globals[g/bs - start]; \ 2280040bde1SJunchao Zhang if (local >= 0) local = bs*local + (g % bs); \ 229413f72f0SBarry Smith } while (0) 230541bf97eSAdrian Croucher 231413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 232413f72f0SBarry Smith 233413f72f0SBarry Smith #define GTOLTYPE _Basic 234413f72f0SBarry Smith #define GTOLNAME Block_Basic 235541bf97eSAdrian Croucher #define GTOLBS 1 236413f72f0SBarry Smith #define GTOL(g, local) do { \ 237413f72f0SBarry Smith local = map->globals[g - start]; \ 238413f72f0SBarry Smith } while (0) 239413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 240413f72f0SBarry Smith 241413f72f0SBarry Smith #define GTOLTYPE _Hash 242413f72f0SBarry Smith #define GTOLNAME _Hash 243541bf97eSAdrian Croucher #define GTOLBS mapping->bs 244413f72f0SBarry Smith #define GTOL(g, local) do { \ 245e8f14785SLisandro Dalcin (void)PetscHMapIGet(map->globalht,g/bs,&local); \ 2460040bde1SJunchao Zhang if (local >= 0) local = bs*local + (g % bs); \ 247413f72f0SBarry Smith } while (0) 248413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 249413f72f0SBarry Smith 250413f72f0SBarry Smith #define GTOLTYPE _Hash 251413f72f0SBarry Smith #define GTOLNAME Block_Hash 252541bf97eSAdrian Croucher #define GTOLBS 1 253413f72f0SBarry Smith #define GTOL(g, local) do { \ 254e8f14785SLisandro Dalcin (void)PetscHMapIGet(map->globalht,g,&local); \ 255413f72f0SBarry Smith } while (0) 256413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 257413f72f0SBarry Smith 2586658fb44Sstefano_zampini /*@ 2596658fb44Sstefano_zampini ISLocalToGlobalMappingDuplicate - Duplicates the local to global mapping object 2606658fb44Sstefano_zampini 2616658fb44Sstefano_zampini Not Collective 2626658fb44Sstefano_zampini 2636658fb44Sstefano_zampini Input Parameter: 2646658fb44Sstefano_zampini . ltog - local to global mapping 2656658fb44Sstefano_zampini 2666658fb44Sstefano_zampini Output Parameter: 2676658fb44Sstefano_zampini . nltog - the duplicated local to global mapping 2686658fb44Sstefano_zampini 2696658fb44Sstefano_zampini Level: advanced 2706658fb44Sstefano_zampini 2716658fb44Sstefano_zampini .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 2726658fb44Sstefano_zampini @*/ 2736658fb44Sstefano_zampini PetscErrorCode ISLocalToGlobalMappingDuplicate(ISLocalToGlobalMapping ltog,ISLocalToGlobalMapping* nltog) 2746658fb44Sstefano_zampini { 275a0d79125SStefano Zampini ISLocalToGlobalMappingType l2gtype; 2766658fb44Sstefano_zampini 2776658fb44Sstefano_zampini PetscFunctionBegin; 2786658fb44Sstefano_zampini PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 2799566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)ltog),ltog->bs,ltog->n,ltog->indices,PETSC_COPY_VALUES,nltog)); 2809566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetType(ltog,&l2gtype)); 2819566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(*nltog,l2gtype)); 2826658fb44Sstefano_zampini PetscFunctionReturn(0); 2836658fb44Sstefano_zampini } 2846658fb44Sstefano_zampini 285565245c5SBarry Smith /*@ 286107e9a97SBarry Smith ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping 2873b9aefa3SBarry Smith 2883b9aefa3SBarry Smith Not Collective 2893b9aefa3SBarry Smith 2903b9aefa3SBarry Smith Input Parameter: 2913b9aefa3SBarry Smith . ltog - local to global mapping 2923b9aefa3SBarry Smith 2933b9aefa3SBarry Smith Output Parameter: 294107e9a97SBarry Smith . n - the number of entries in the local mapping, ISLocalToGlobalMappingGetIndices() returns an array of this length 2953b9aefa3SBarry Smith 2963b9aefa3SBarry Smith Level: advanced 2973b9aefa3SBarry Smith 2983b9aefa3SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 2993b9aefa3SBarry Smith @*/ 3007087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping,PetscInt *n) 3013b9aefa3SBarry Smith { 3023b9aefa3SBarry Smith PetscFunctionBegin; 3030700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 3044482741eSBarry Smith PetscValidIntPointer(n,2); 305107e9a97SBarry Smith *n = mapping->bs*mapping->n; 3063b9aefa3SBarry Smith PetscFunctionReturn(0); 3073b9aefa3SBarry Smith } 3083b9aefa3SBarry Smith 3095a5d4f66SBarry Smith /*@C 310fe2efc57SMark ISLocalToGlobalMappingViewFromOptions - View from Options 311fe2efc57SMark 312fe2efc57SMark Collective on ISLocalToGlobalMapping 313fe2efc57SMark 314fe2efc57SMark Input Parameters: 315fe2efc57SMark + A - the local to global mapping object 316736c3998SJose E. Roman . obj - Optional object 317736c3998SJose E. Roman - name - command line option 318fe2efc57SMark 319fe2efc57SMark Level: intermediate 320fe2efc57SMark .seealso: ISLocalToGlobalMapping, ISLocalToGlobalMappingView, PetscObjectViewFromOptions(), ISLocalToGlobalMappingCreate() 321fe2efc57SMark @*/ 322fe2efc57SMark PetscErrorCode ISLocalToGlobalMappingViewFromOptions(ISLocalToGlobalMapping A,PetscObject obj,const char name[]) 323fe2efc57SMark { 324fe2efc57SMark PetscFunctionBegin; 325fe2efc57SMark PetscValidHeaderSpecific(A,IS_LTOGM_CLASSID,1); 3269566063dSJacob Faibussowitsch PetscCall(PetscObjectViewFromOptions((PetscObject)A,obj,name)); 327fe2efc57SMark PetscFunctionReturn(0); 328fe2efc57SMark } 329fe2efc57SMark 330fe2efc57SMark /*@C 3315a5d4f66SBarry Smith ISLocalToGlobalMappingView - View a local to global mapping 3325a5d4f66SBarry Smith 333b9cd556bSLois Curfman McInnes Not Collective 334b9cd556bSLois Curfman McInnes 3355a5d4f66SBarry Smith Input Parameters: 3363b9aefa3SBarry Smith + ltog - local to global mapping 3373b9aefa3SBarry Smith - viewer - viewer 3385a5d4f66SBarry Smith 339a997ad1aSLois Curfman McInnes Level: advanced 340a997ad1aSLois Curfman McInnes 3415a5d4f66SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 3425a5d4f66SBarry Smith @*/ 3437087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping,PetscViewer viewer) 3445a5d4f66SBarry Smith { 34532dcc486SBarry Smith PetscInt i; 34632dcc486SBarry Smith PetscMPIInt rank; 347ace3abfcSBarry Smith PetscBool iascii; 3485a5d4f66SBarry Smith 3495a5d4f66SBarry Smith PetscFunctionBegin; 3500700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 3513050cee2SBarry Smith if (!viewer) { 3529566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)mapping),&viewer)); 3533050cee2SBarry Smith } 3540700a824SBarry Smith PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2); 3555a5d4f66SBarry Smith 3569566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mapping),&rank)); 3579566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii)); 35832077d6dSBarry Smith if (iascii) { 3599566063dSJacob Faibussowitsch PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)mapping,viewer)); 3609566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 3615a5d4f66SBarry Smith for (i=0; i<mapping->n; i++) { 3629566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %" PetscInt_FMT " %" PetscInt_FMT "\n",rank,i,mapping->indices[i])); 3636831982aSBarry Smith } 3649566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 3659566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 3661575c14dSBarry Smith } 3675a5d4f66SBarry Smith PetscFunctionReturn(0); 3685a5d4f66SBarry Smith } 3695a5d4f66SBarry Smith 3701f428162SBarry Smith /*@ 3712bdab257SBarry Smith ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n) 3722bdab257SBarry Smith ordering and a global parallel ordering. 3732bdab257SBarry Smith 3740f5bd95cSBarry Smith Not collective 375b9cd556bSLois Curfman McInnes 376a997ad1aSLois Curfman McInnes Input Parameter: 3778c03b21aSDmitry Karpeev . is - index set containing the global numbers for each local number 3782bdab257SBarry Smith 379a997ad1aSLois Curfman McInnes Output Parameter: 3802bdab257SBarry Smith . mapping - new mapping data structure 3812bdab257SBarry Smith 38295452b02SPatrick Sanan Notes: 38395452b02SPatrick Sanan the block size of the IS determines the block size of the mapping 384a997ad1aSLois Curfman McInnes Level: advanced 385a997ad1aSLois Curfman McInnes 3867e99dc12SLawrence Mitchell .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingSetFromOptions() 3872bdab257SBarry Smith @*/ 3887087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingCreateIS(IS is,ISLocalToGlobalMapping *mapping) 3892bdab257SBarry Smith { 3903bbf0e92SBarry Smith PetscInt n,bs; 3915d0c19d7SBarry Smith const PetscInt *indices; 3922bdab257SBarry Smith MPI_Comm comm; 3933bbf0e92SBarry Smith PetscBool isblock; 3943a40ed3dSBarry Smith 3953a40ed3dSBarry Smith PetscFunctionBegin; 3960700a824SBarry Smith PetscValidHeaderSpecific(is,IS_CLASSID,1); 3974482741eSBarry Smith PetscValidPointer(mapping,2); 3982bdab257SBarry Smith 3999566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)is,&comm)); 4009566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is,&n)); 4019566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)is,ISBLOCK,&isblock)); 4026006e8d2SBarry Smith if (!isblock) { 4039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is,&indices)); 4049566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm,1,n,indices,PETSC_COPY_VALUES,mapping)); 4059566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is,&indices)); 4066006e8d2SBarry Smith } else { 4079566063dSJacob Faibussowitsch PetscCall(ISGetBlockSize(is,&bs)); 4089566063dSJacob Faibussowitsch PetscCall(ISBlockGetIndices(is,&indices)); 4099566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm,bs,n/bs,indices,PETSC_COPY_VALUES,mapping)); 4109566063dSJacob Faibussowitsch PetscCall(ISBlockRestoreIndices(is,&indices)); 4116006e8d2SBarry Smith } 4123a40ed3dSBarry Smith PetscFunctionReturn(0); 4132bdab257SBarry Smith } 4145a5d4f66SBarry Smith 415a4d96a55SJed Brown /*@C 416a4d96a55SJed Brown ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n) 417a4d96a55SJed Brown ordering and a global parallel ordering. 418a4d96a55SJed Brown 419a4d96a55SJed Brown Collective 420a4d96a55SJed Brown 421d8d19677SJose E. Roman Input Parameters: 422a4d96a55SJed Brown + sf - star forest mapping contiguous local indices to (rank, offset) 4239a535bafSVaclav Hapla - start - first global index on this process, or PETSC_DECIDE to compute contiguous global numbering automatically 424a4d96a55SJed Brown 425a4d96a55SJed Brown Output Parameter: 426a4d96a55SJed Brown . mapping - new mapping data structure 427a4d96a55SJed Brown 428a4d96a55SJed Brown Level: advanced 429a4d96a55SJed Brown 4309a535bafSVaclav Hapla Notes: 4319a535bafSVaclav Hapla If any processor calls this with start = PETSC_DECIDE then all processors must, otherwise the program will hang. 4329a535bafSVaclav Hapla 4337e99dc12SLawrence Mitchell .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingSetFromOptions() 434a4d96a55SJed Brown @*/ 435a4d96a55SJed Brown PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf,PetscInt start,ISLocalToGlobalMapping *mapping) 436a4d96a55SJed Brown { 437a4d96a55SJed Brown PetscInt i,maxlocal,nroots,nleaves,*globals,*ltog; 438a4d96a55SJed Brown MPI_Comm comm; 439a4d96a55SJed Brown 440a4d96a55SJed Brown PetscFunctionBegin; 441a4d96a55SJed Brown PetscValidHeaderSpecific(sf,PETSCSF_CLASSID,1); 442a4d96a55SJed Brown PetscValidPointer(mapping,3); 4439566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf,&comm)); 44441f4c31fSVaclav Hapla PetscCall(PetscSFGetGraph(sf,&nroots,&nleaves,NULL,NULL)); 4459a535bafSVaclav Hapla if (start == PETSC_DECIDE) { 4469a535bafSVaclav Hapla start = 0; 4479566063dSJacob Faibussowitsch PetscCallMPI(MPI_Exscan(&nroots,&start,1,MPIU_INT,MPI_SUM,comm)); 44841f4c31fSVaclav Hapla } else PetscCheck(start >= 0,comm, PETSC_ERR_ARG_OUTOFRANGE, "start must be nonnegative or PETSC_DECIDE"); 44941f4c31fSVaclav Hapla PetscCall(PetscSFGetLeafRange(sf, NULL, &maxlocal)); 45041f4c31fSVaclav Hapla ++maxlocal; 4519566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nroots,&globals)); 4529566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(maxlocal,<og)); 453a4d96a55SJed Brown for (i=0; i<nroots; i++) globals[i] = start + i; 454a4d96a55SJed Brown for (i=0; i<maxlocal; i++) ltog[i] = -1; 4559566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf,MPIU_INT,globals,ltog,MPI_REPLACE)); 4569566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf,MPIU_INT,globals,ltog,MPI_REPLACE)); 4579566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm,1,maxlocal,ltog,PETSC_OWN_POINTER,mapping)); 4589566063dSJacob Faibussowitsch PetscCall(PetscFree(globals)); 459a4d96a55SJed Brown PetscFunctionReturn(0); 460a4d96a55SJed Brown } 461b46b645bSBarry Smith 46263fa5c83Sstefano_zampini /*@ 46363fa5c83Sstefano_zampini ISLocalToGlobalMappingSetBlockSize - Sets the blocksize of the mapping 46463fa5c83Sstefano_zampini 46563fa5c83Sstefano_zampini Not collective 46663fa5c83Sstefano_zampini 46763fa5c83Sstefano_zampini Input Parameters: 468a2b725a8SWilliam Gropp + mapping - mapping data structure 469a2b725a8SWilliam Gropp - bs - the blocksize 47063fa5c83Sstefano_zampini 47163fa5c83Sstefano_zampini Level: advanced 47263fa5c83Sstefano_zampini 47363fa5c83Sstefano_zampini .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS() 47463fa5c83Sstefano_zampini @*/ 47563fa5c83Sstefano_zampini PetscErrorCode ISLocalToGlobalMappingSetBlockSize(ISLocalToGlobalMapping mapping,PetscInt bs) 47663fa5c83Sstefano_zampini { 477a59f3c4dSstefano_zampini PetscInt *nid; 478a59f3c4dSstefano_zampini const PetscInt *oid; 479a59f3c4dSstefano_zampini PetscInt i,cn,on,obs,nn; 48063fa5c83Sstefano_zampini 48163fa5c83Sstefano_zampini PetscFunctionBegin; 48263fa5c83Sstefano_zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 483*08401ef6SPierre Jolivet PetscCheck(bs >= 1,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Invalid block size %" PetscInt_FMT,bs); 48463fa5c83Sstefano_zampini if (bs == mapping->bs) PetscFunctionReturn(0); 48563fa5c83Sstefano_zampini on = mapping->n; 48663fa5c83Sstefano_zampini obs = mapping->bs; 48763fa5c83Sstefano_zampini oid = mapping->indices; 48863fa5c83Sstefano_zampini nn = (on*obs)/bs; 489*08401ef6SPierre Jolivet PetscCheck((on*obs)%bs == 0,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Block size %" PetscInt_FMT " is inconsistent with block size %" PetscInt_FMT " and number of block indices %" PetscInt_FMT,bs,obs,on); 490a59f3c4dSstefano_zampini 4919566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nn,&nid)); 4929566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(mapping,&oid)); 493a59f3c4dSstefano_zampini for (i=0;i<nn;i++) { 494a59f3c4dSstefano_zampini PetscInt j; 495a59f3c4dSstefano_zampini for (j=0,cn=0;j<bs-1;j++) { 496a59f3c4dSstefano_zampini if (oid[i*bs+j] < 0) { cn++; continue; } 497*08401ef6SPierre Jolivet PetscCheck(oid[i*bs+j] == oid[i*bs+j+1]-1,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Block sizes %" PetscInt_FMT " and %" PetscInt_FMT " are incompatible with the block indices: non consecutive indices %" PetscInt_FMT " %" PetscInt_FMT,bs,obs,oid[i*bs+j],oid[i*bs+j+1]); 498a59f3c4dSstefano_zampini } 499a59f3c4dSstefano_zampini if (oid[i*bs+j] < 0) cn++; 5008b7cb0e6Sstefano_zampini if (cn) { 501*08401ef6SPierre Jolivet PetscCheck(cn == bs,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Block sizes %" PetscInt_FMT " and %" PetscInt_FMT " are incompatible with the block indices: invalid number of negative entries in block %" PetscInt_FMT,bs,obs,cn); 502a59f3c4dSstefano_zampini nid[i] = -1; 5038b7cb0e6Sstefano_zampini } else { 504a59f3c4dSstefano_zampini nid[i] = oid[i*bs]/bs; 50563fa5c83Sstefano_zampini } 50663fa5c83Sstefano_zampini } 5079566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(mapping,&oid)); 508a59f3c4dSstefano_zampini 50963fa5c83Sstefano_zampini mapping->n = nn; 51063fa5c83Sstefano_zampini mapping->bs = bs; 5119566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->indices)); 51263fa5c83Sstefano_zampini mapping->indices = nid; 513c9345713Sstefano_zampini mapping->globalstart = 0; 514c9345713Sstefano_zampini mapping->globalend = 0; 5151bd0b88eSStefano Zampini 5161bd0b88eSStefano Zampini /* reset the cached information */ 5179566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->info_procs)); 5189566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->info_numprocs)); 5191bd0b88eSStefano Zampini if (mapping->info_indices) { 5201bd0b88eSStefano Zampini PetscInt i; 5211bd0b88eSStefano Zampini 5229566063dSJacob Faibussowitsch PetscCall(PetscFree((mapping->info_indices)[0])); 5231bd0b88eSStefano Zampini for (i=1; i<mapping->info_nproc; i++) { 5249566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->info_indices[i])); 5251bd0b88eSStefano Zampini } 5269566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->info_indices)); 5271bd0b88eSStefano Zampini } 5281bd0b88eSStefano Zampini mapping->info_cached = PETSC_FALSE; 5291bd0b88eSStefano Zampini 530413f72f0SBarry Smith if (mapping->ops->destroy) { 5319566063dSJacob Faibussowitsch PetscCall((*mapping->ops->destroy)(mapping)); 532413f72f0SBarry Smith } 53363fa5c83Sstefano_zampini PetscFunctionReturn(0); 53463fa5c83Sstefano_zampini } 53563fa5c83Sstefano_zampini 53645b6f7e9SBarry Smith /*@ 53745b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockSize - Gets the blocksize of the mapping 53845b6f7e9SBarry Smith ordering and a global parallel ordering. 53945b6f7e9SBarry Smith 54045b6f7e9SBarry Smith Not Collective 54145b6f7e9SBarry Smith 54245b6f7e9SBarry Smith Input Parameters: 54345b6f7e9SBarry Smith . mapping - mapping data structure 54445b6f7e9SBarry Smith 54545b6f7e9SBarry Smith Output Parameter: 54645b6f7e9SBarry Smith . bs - the blocksize 54745b6f7e9SBarry Smith 54845b6f7e9SBarry Smith Level: advanced 54945b6f7e9SBarry Smith 55045b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS() 55145b6f7e9SBarry Smith @*/ 55245b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockSize(ISLocalToGlobalMapping mapping,PetscInt *bs) 55345b6f7e9SBarry Smith { 55445b6f7e9SBarry Smith PetscFunctionBegin; 555cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 55645b6f7e9SBarry Smith *bs = mapping->bs; 55745b6f7e9SBarry Smith PetscFunctionReturn(0); 55845b6f7e9SBarry Smith } 55945b6f7e9SBarry Smith 560ba5bb76aSSatish Balay /*@ 56190f02eecSBarry Smith ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n) 56290f02eecSBarry Smith ordering and a global parallel ordering. 5632362add9SBarry Smith 56489d82c54SBarry Smith Not Collective, but communicator may have more than one process 565b9cd556bSLois Curfman McInnes 5662362add9SBarry Smith Input Parameters: 56789d82c54SBarry Smith + comm - MPI communicator 568f0413b6fSBarry Smith . bs - the block size 56928bc9809SBarry Smith . n - the number of local elements divided by the block size, or equivalently the number of block indices 57028bc9809SBarry Smith . indices - the global index for each local element, these do not need to be in increasing order (sorted), these values should not be scaled (i.e. multiplied) by the blocksize bs 571d5ad8652SBarry Smith - mode - see PetscCopyMode 5722362add9SBarry Smith 573a997ad1aSLois Curfman McInnes Output Parameter: 57490f02eecSBarry Smith . mapping - new mapping data structure 5752362add9SBarry Smith 57695452b02SPatrick Sanan Notes: 57795452b02SPatrick Sanan There is one integer value in indices per block and it represents the actual indices bs*idx + j, where j=0,..,bs-1 578413f72f0SBarry Smith 5799a7b7924SJed Brown For "small" problems when using ISGlobalToLocalMappingApply() and ISGlobalToLocalMappingApplyBlock(), the ISLocalToGlobalMappingType of ISLOCALTOGLOBALMAPPINGBASIC will be used; 580413f72f0SBarry Smith this uses more memory but is faster; this approach is not scalable for extremely large mappings. For large problems ISLOCALTOGLOBALMAPPINGHASH is used, this is scalable. 581413f72f0SBarry Smith Use ISLocalToGlobalMappingSetType() or call ISLocalToGlobalMappingSetFromOptions() with the option -islocaltoglobalmapping_type <basic,hash> to control which is used. 582413f72f0SBarry Smith 583a997ad1aSLois Curfman McInnes Level: advanced 584a997ad1aSLois Curfman McInnes 585413f72f0SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingSetFromOptions(), ISLOCALTOGLOBALMAPPINGBASIC, ISLOCALTOGLOBALMAPPINGHASH 586413f72f0SBarry Smith ISLocalToGlobalMappingSetType(), ISLocalToGlobalMappingType 5872362add9SBarry Smith @*/ 58860c7cefcSBarry Smith PetscErrorCode ISLocalToGlobalMappingCreate(MPI_Comm comm,PetscInt bs,PetscInt n,const PetscInt indices[],PetscCopyMode mode,ISLocalToGlobalMapping *mapping) 5892362add9SBarry Smith { 59032dcc486SBarry Smith PetscInt *in; 591b46b645bSBarry Smith 592b46b645bSBarry Smith PetscFunctionBegin; 593064a246eSJacob Faibussowitsch if (n) PetscValidIntPointer(indices,4); 594064a246eSJacob Faibussowitsch PetscValidPointer(mapping,6); 595b46b645bSBarry Smith 5960298fd71SBarry Smith *mapping = NULL; 5979566063dSJacob Faibussowitsch PetscCall(ISInitializePackage()); 5982362add9SBarry Smith 5999566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(*mapping,IS_LTOGM_CLASSID,"ISLocalToGlobalMapping","Local to global mapping","IS",comm,ISLocalToGlobalMappingDestroy,ISLocalToGlobalMappingView)); 600d4bb536fSBarry Smith (*mapping)->n = n; 601f0413b6fSBarry Smith (*mapping)->bs = bs; 602d5ad8652SBarry Smith if (mode == PETSC_COPY_VALUES) { 6039566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n,&in)); 6049566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(in,indices,n)); 605d5ad8652SBarry Smith (*mapping)->indices = in; 60671910c26SVaclav Hapla (*mapping)->dealloc_indices = PETSC_TRUE; 6079566063dSJacob Faibussowitsch PetscCall(PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt))); 6086389a1a1SBarry Smith } else if (mode == PETSC_OWN_POINTER) { 6096389a1a1SBarry Smith (*mapping)->indices = (PetscInt*)indices; 61071910c26SVaclav Hapla (*mapping)->dealloc_indices = PETSC_TRUE; 6119566063dSJacob Faibussowitsch PetscCall(PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt))); 61271910c26SVaclav Hapla } else if (mode == PETSC_USE_POINTER) { 61371910c26SVaclav Hapla (*mapping)->indices = (PetscInt*)indices; 6146389a1a1SBarry Smith } 61598921bdaSJacob Faibussowitsch else SETERRQ(comm,PETSC_ERR_ARG_OUTOFRANGE,"Invalid mode %d", mode); 6163a40ed3dSBarry Smith PetscFunctionReturn(0); 6172362add9SBarry Smith } 6182362add9SBarry Smith 619413f72f0SBarry Smith PetscFunctionList ISLocalToGlobalMappingList = NULL; 620413f72f0SBarry Smith 62190f02eecSBarry Smith /*@ 6227e99dc12SLawrence Mitchell ISLocalToGlobalMappingSetFromOptions - Set mapping options from the options database. 6237e99dc12SLawrence Mitchell 6247e99dc12SLawrence Mitchell Not collective 6257e99dc12SLawrence Mitchell 6267e99dc12SLawrence Mitchell Input Parameters: 6277e99dc12SLawrence Mitchell . mapping - mapping data structure 6287e99dc12SLawrence Mitchell 6297e99dc12SLawrence Mitchell Level: advanced 6307e99dc12SLawrence Mitchell 6317e99dc12SLawrence Mitchell @*/ 6327e99dc12SLawrence Mitchell PetscErrorCode ISLocalToGlobalMappingSetFromOptions(ISLocalToGlobalMapping mapping) 6337e99dc12SLawrence Mitchell { 6347e99dc12SLawrence Mitchell PetscErrorCode ierr; 635413f72f0SBarry Smith char type[256]; 636413f72f0SBarry Smith ISLocalToGlobalMappingType defaulttype = "Not set"; 6377e99dc12SLawrence Mitchell PetscBool flg; 6387e99dc12SLawrence Mitchell 6397e99dc12SLawrence Mitchell PetscFunctionBegin; 6407e99dc12SLawrence Mitchell PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 6419566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegisterAll()); 6429566063dSJacob Faibussowitsch ierr = PetscObjectOptionsBegin((PetscObject)mapping);PetscCall(ierr); 6439566063dSJacob Faibussowitsch PetscCall(PetscOptionsFList("-islocaltoglobalmapping_type","ISLocalToGlobalMapping method","ISLocalToGlobalMappingSetType",ISLocalToGlobalMappingList,(char*)(((PetscObject)mapping)->type_name) ? ((PetscObject)mapping)->type_name : defaulttype,type,256,&flg)); 644413f72f0SBarry Smith if (flg) { 6459566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(mapping,type)); 646413f72f0SBarry Smith } 6479566063dSJacob Faibussowitsch ierr = PetscOptionsEnd();PetscCall(ierr); 6487e99dc12SLawrence Mitchell PetscFunctionReturn(0); 6497e99dc12SLawrence Mitchell } 6507e99dc12SLawrence Mitchell 6517e99dc12SLawrence Mitchell /*@ 65290f02eecSBarry Smith ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n) 65390f02eecSBarry Smith ordering and a global parallel ordering. 65490f02eecSBarry Smith 6550f5bd95cSBarry Smith Note Collective 656b9cd556bSLois Curfman McInnes 65790f02eecSBarry Smith Input Parameters: 65890f02eecSBarry Smith . mapping - mapping data structure 65990f02eecSBarry Smith 660a997ad1aSLois Curfman McInnes Level: advanced 661a997ad1aSLois Curfman McInnes 6623acfe500SLois Curfman McInnes .seealso: ISLocalToGlobalMappingCreate() 66390f02eecSBarry Smith @*/ 6646bf464f9SBarry Smith PetscErrorCode ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping) 66590f02eecSBarry Smith { 6663a40ed3dSBarry Smith PetscFunctionBegin; 6676bf464f9SBarry Smith if (!*mapping) PetscFunctionReturn(0); 6686bf464f9SBarry Smith PetscValidHeaderSpecific((*mapping),IS_LTOGM_CLASSID,1); 6694c8fdceaSLisandro Dalcin if (--((PetscObject)(*mapping))->refct > 0) {*mapping = NULL;PetscFunctionReturn(0);} 67071910c26SVaclav Hapla if ((*mapping)->dealloc_indices) { 6719566063dSJacob Faibussowitsch PetscCall(PetscFree((*mapping)->indices)); 67271910c26SVaclav Hapla } 6739566063dSJacob Faibussowitsch PetscCall(PetscFree((*mapping)->info_procs)); 6749566063dSJacob Faibussowitsch PetscCall(PetscFree((*mapping)->info_numprocs)); 675268a049cSStefano Zampini if ((*mapping)->info_indices) { 676268a049cSStefano Zampini PetscInt i; 677268a049cSStefano Zampini 6789566063dSJacob Faibussowitsch PetscCall(PetscFree(((*mapping)->info_indices)[0])); 679268a049cSStefano Zampini for (i=1; i<(*mapping)->info_nproc; i++) { 6809566063dSJacob Faibussowitsch PetscCall(PetscFree(((*mapping)->info_indices)[i])); 681268a049cSStefano Zampini } 6829566063dSJacob Faibussowitsch PetscCall(PetscFree((*mapping)->info_indices)); 683268a049cSStefano Zampini } 6841bd0b88eSStefano Zampini if ((*mapping)->info_nodei) { 6859566063dSJacob Faibussowitsch PetscCall(PetscFree(((*mapping)->info_nodei)[0])); 6861bd0b88eSStefano Zampini } 6879566063dSJacob Faibussowitsch PetscCall(PetscFree2((*mapping)->info_nodec,(*mapping)->info_nodei)); 688413f72f0SBarry Smith if ((*mapping)->ops->destroy) { 6899566063dSJacob Faibussowitsch PetscCall((*(*mapping)->ops->destroy)(*mapping)); 690413f72f0SBarry Smith } 6919566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(mapping)); 6924c8fdceaSLisandro Dalcin *mapping = NULL; 6933a40ed3dSBarry Smith PetscFunctionReturn(0); 69490f02eecSBarry Smith } 69590f02eecSBarry Smith 69690f02eecSBarry Smith /*@ 6973acfe500SLois Curfman McInnes ISLocalToGlobalMappingApplyIS - Creates from an IS in the local numbering 6983acfe500SLois Curfman McInnes a new index set using the global numbering defined in an ISLocalToGlobalMapping 6993acfe500SLois Curfman McInnes context. 70090f02eecSBarry Smith 7014cb36875SStefano Zampini Collective on is 702b9cd556bSLois Curfman McInnes 70390f02eecSBarry Smith Input Parameters: 704b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 705b9cd556bSLois Curfman McInnes - is - index set in local numbering 70690f02eecSBarry Smith 70790f02eecSBarry Smith Output Parameters: 70890f02eecSBarry Smith . newis - index set in global numbering 70990f02eecSBarry Smith 7104cb36875SStefano Zampini Notes: 7114cb36875SStefano Zampini The output IS will have the same communicator of the input IS. 7124cb36875SStefano Zampini 713a997ad1aSLois Curfman McInnes Level: advanced 714a997ad1aSLois Curfman McInnes 71590f02eecSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(), 716d4bb536fSBarry Smith ISLocalToGlobalMappingDestroy(), ISGlobalToLocalMappingApply() 71790f02eecSBarry Smith @*/ 7187087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping,IS is,IS *newis) 71990f02eecSBarry Smith { 720e24637baSBarry Smith PetscInt n,*idxout; 7215d0c19d7SBarry Smith const PetscInt *idxin; 7223a40ed3dSBarry Smith 7233a40ed3dSBarry Smith PetscFunctionBegin; 7240700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 7250700a824SBarry Smith PetscValidHeaderSpecific(is,IS_CLASSID,2); 7264482741eSBarry Smith PetscValidPointer(newis,3); 72790f02eecSBarry Smith 7289566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is,&n)); 7299566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is,&idxin)); 7309566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n,&idxout)); 7319566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingApply(mapping,n,idxin,idxout)); 7329566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is,&idxin)); 7339566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)is),n,idxout,PETSC_OWN_POINTER,newis)); 7343a40ed3dSBarry Smith PetscFunctionReturn(0); 73590f02eecSBarry Smith } 73690f02eecSBarry Smith 737b89cb25eSSatish Balay /*@ 7383acfe500SLois Curfman McInnes ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering 7393acfe500SLois Curfman McInnes and converts them to the global numbering. 74090f02eecSBarry Smith 741b9cd556bSLois Curfman McInnes Not collective 742b9cd556bSLois Curfman McInnes 743bb25748dSBarry Smith Input Parameters: 744b9cd556bSLois Curfman McInnes + mapping - the local to global mapping context 745bb25748dSBarry Smith . N - number of integers 746b9cd556bSLois Curfman McInnes - in - input indices in local numbering 747bb25748dSBarry Smith 748bb25748dSBarry Smith Output Parameter: 749bb25748dSBarry Smith . out - indices in global numbering 750bb25748dSBarry Smith 751b9cd556bSLois Curfman McInnes Notes: 752b9cd556bSLois Curfman McInnes The in and out array parameters may be identical. 753d4bb536fSBarry Smith 754a997ad1aSLois Curfman McInnes Level: advanced 755a997ad1aSLois Curfman McInnes 75645b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApplyBlock(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(), 7570752156aSBarry Smith ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(), 758d4bb536fSBarry Smith AOPetscToApplication(), ISGlobalToLocalMappingApply() 759bb25748dSBarry Smith 760afcb2eb5SJed Brown @*/ 761afcb2eb5SJed Brown PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[]) 762afcb2eb5SJed Brown { 763cbc1caf0SMatthew G. Knepley PetscInt i,bs,Nmax; 76445b6f7e9SBarry Smith 76545b6f7e9SBarry Smith PetscFunctionBegin; 766cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 767cbc1caf0SMatthew G. Knepley bs = mapping->bs; 768cbc1caf0SMatthew G. Knepley Nmax = bs*mapping->n; 76945b6f7e9SBarry Smith if (bs == 1) { 770cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 77145b6f7e9SBarry Smith for (i=0; i<N; i++) { 77245b6f7e9SBarry Smith if (in[i] < 0) { 77345b6f7e9SBarry Smith out[i] = in[i]; 77445b6f7e9SBarry Smith continue; 77545b6f7e9SBarry Smith } 776*08401ef6SPierre Jolivet PetscCheck(in[i] < Nmax,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT,in[i],Nmax-1,i); 77745b6f7e9SBarry Smith out[i] = idx[in[i]]; 77845b6f7e9SBarry Smith } 77945b6f7e9SBarry Smith } else { 780cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 78145b6f7e9SBarry Smith for (i=0; i<N; i++) { 78245b6f7e9SBarry Smith if (in[i] < 0) { 78345b6f7e9SBarry Smith out[i] = in[i]; 78445b6f7e9SBarry Smith continue; 78545b6f7e9SBarry Smith } 786*08401ef6SPierre Jolivet PetscCheck(in[i] < Nmax,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT,in[i],Nmax-1,i); 78745b6f7e9SBarry Smith out[i] = idx[in[i]/bs]*bs + (in[i] % bs); 78845b6f7e9SBarry Smith } 78945b6f7e9SBarry Smith } 79045b6f7e9SBarry Smith PetscFunctionReturn(0); 79145b6f7e9SBarry Smith } 79245b6f7e9SBarry Smith 79345b6f7e9SBarry Smith /*@ 7946006e8d2SBarry Smith ISLocalToGlobalMappingApplyBlock - Takes a list of integers in a local block numbering and converts them to the global block numbering 79545b6f7e9SBarry Smith 79645b6f7e9SBarry Smith Not collective 79745b6f7e9SBarry Smith 79845b6f7e9SBarry Smith Input Parameters: 79945b6f7e9SBarry Smith + mapping - the local to global mapping context 80045b6f7e9SBarry Smith . N - number of integers 8016006e8d2SBarry Smith - in - input indices in local block numbering 80245b6f7e9SBarry Smith 80345b6f7e9SBarry Smith Output Parameter: 8046006e8d2SBarry Smith . out - indices in global block numbering 80545b6f7e9SBarry Smith 80645b6f7e9SBarry Smith Notes: 80745b6f7e9SBarry Smith The in and out array parameters may be identical. 80845b6f7e9SBarry Smith 8096006e8d2SBarry Smith Example: 8106006e8d2SBarry Smith If the index values are {0,1,6,7} set with a call to ISLocalToGlobalMappingCreate(PETSC_COMM_SELF,2,2,{0,3}) then the mapping applied to 0 8116006e8d2SBarry Smith (the first block) would produce 0 and the mapping applied to 1 (the second block) would produce 3. 8126006e8d2SBarry Smith 81345b6f7e9SBarry Smith Level: advanced 81445b6f7e9SBarry Smith 81545b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(), 81645b6f7e9SBarry Smith ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(), 81745b6f7e9SBarry Smith AOPetscToApplication(), ISGlobalToLocalMappingApply() 81845b6f7e9SBarry Smith 81945b6f7e9SBarry Smith @*/ 82045b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingApplyBlock(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[]) 82145b6f7e9SBarry Smith { 8228a1f772fSStefano Zampini PetscInt i,Nmax; 8238a1f772fSStefano Zampini const PetscInt *idx; 824d4bb536fSBarry Smith 825a0d79125SStefano Zampini PetscFunctionBegin; 826a0d79125SStefano Zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 8278a1f772fSStefano Zampini Nmax = mapping->n; 8288a1f772fSStefano Zampini idx = mapping->indices; 829afcb2eb5SJed Brown for (i=0; i<N; i++) { 830afcb2eb5SJed Brown if (in[i] < 0) { 831afcb2eb5SJed Brown out[i] = in[i]; 832afcb2eb5SJed Brown continue; 833afcb2eb5SJed Brown } 834*08401ef6SPierre Jolivet PetscCheck(in[i] < Nmax,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local block index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT,in[i],Nmax-1,i); 835afcb2eb5SJed Brown out[i] = idx[in[i]]; 836afcb2eb5SJed Brown } 837afcb2eb5SJed Brown PetscFunctionReturn(0); 838afcb2eb5SJed Brown } 839d4bb536fSBarry Smith 8407e99dc12SLawrence Mitchell /*@ 841a997ad1aSLois Curfman McInnes ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers 842a997ad1aSLois Curfman McInnes specified with a global numbering. 843d4bb536fSBarry Smith 844b9cd556bSLois Curfman McInnes Not collective 845b9cd556bSLois Curfman McInnes 846d4bb536fSBarry Smith Input Parameters: 847b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 8480040bde1SJunchao Zhang . type - IS_GTOLM_MASK - maps global indices with no local value to -1 in the output list (i.e., mask them) 849d4bb536fSBarry Smith IS_GTOLM_DROP - drops the indices with no local value from the output list 850d4bb536fSBarry Smith . n - number of global indices to map 851b9cd556bSLois Curfman McInnes - idx - global indices to map 852d4bb536fSBarry Smith 853d4bb536fSBarry Smith Output Parameters: 854b9cd556bSLois Curfman McInnes + nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n) 855b9cd556bSLois Curfman McInnes - idxout - local index of each global index, one must pass in an array long enough 856e182c471SBarry Smith to hold all the indices. You can call ISGlobalToLocalMappingApply() with 8570298fd71SBarry Smith idxout == NULL to determine the required length (returned in nout) 858e182c471SBarry Smith and then allocate the required space and call ISGlobalToLocalMappingApply() 859e182c471SBarry Smith a second time to set the values. 860d4bb536fSBarry Smith 861b9cd556bSLois Curfman McInnes Notes: 8620298fd71SBarry Smith Either nout or idxout may be NULL. idx and idxout may be identical. 863d4bb536fSBarry Smith 8649a7b7924SJed Brown For "small" problems when using ISGlobalToLocalMappingApply() and ISGlobalToLocalMappingApplyBlock(), the ISLocalToGlobalMappingType of ISLOCALTOGLOBALMAPPINGBASIC will be used; 865413f72f0SBarry Smith this uses more memory but is faster; this approach is not scalable for extremely large mappings. For large problems ISLOCALTOGLOBALMAPPINGHASH is used, this is scalable. 866413f72f0SBarry Smith Use ISLocalToGlobalMappingSetType() or call ISLocalToGlobalMappingSetFromOptions() with the option -islocaltoglobalmapping_type <basic,hash> to control which is used. 8670f5bd95cSBarry Smith 868a997ad1aSLois Curfman McInnes Level: advanced 869a997ad1aSLois Curfman McInnes 87032fd6b96SBarry Smith Developer Note: The manual page states that idx and idxout may be identical but the calling 87132fd6b96SBarry Smith sequence declares idx as const so it cannot be the same as idxout. 87232fd6b96SBarry Smith 8739d90f715SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISGlobalToLocalMappingApplyBlock(), ISLocalToGlobalMappingCreate(), 874413f72f0SBarry Smith ISLocalToGlobalMappingDestroy() 875d4bb536fSBarry Smith @*/ 876413f72f0SBarry Smith PetscErrorCode ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingMode type,PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[]) 877d4bb536fSBarry Smith { 8789d90f715SBarry Smith PetscFunctionBegin; 8799d90f715SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 880413f72f0SBarry Smith if (!mapping->data) { 8819566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingSetUp(mapping)); 8829d90f715SBarry Smith } 8839566063dSJacob Faibussowitsch PetscCall((*mapping->ops->globaltolocalmappingapply)(mapping,type,n,idx,nout,idxout)); 8849d90f715SBarry Smith PetscFunctionReturn(0); 8859d90f715SBarry Smith } 8869d90f715SBarry Smith 887d4fe737eSStefano Zampini /*@ 888d4fe737eSStefano Zampini ISGlobalToLocalMappingApplyIS - Creates from an IS in the global numbering 889d4fe737eSStefano Zampini a new index set using the local numbering defined in an ISLocalToGlobalMapping 890d4fe737eSStefano Zampini context. 891d4fe737eSStefano Zampini 892d4fe737eSStefano Zampini Not collective 893d4fe737eSStefano Zampini 894d4fe737eSStefano Zampini Input Parameters: 895d4fe737eSStefano Zampini + mapping - mapping between local and global numbering 8960040bde1SJunchao Zhang . type - IS_GTOLM_MASK - maps global indices with no local value to -1 in the output list (i.e., mask them) 8972785b321SStefano Zampini IS_GTOLM_DROP - drops the indices with no local value from the output list 898d4fe737eSStefano Zampini - is - index set in global numbering 899d4fe737eSStefano Zampini 900d4fe737eSStefano Zampini Output Parameters: 901d4fe737eSStefano Zampini . newis - index set in local numbering 902d4fe737eSStefano Zampini 9034cb36875SStefano Zampini Notes: 9044cb36875SStefano Zampini The output IS will be sequential, as it encodes a purely local operation 9054cb36875SStefano Zampini 906d4fe737eSStefano Zampini Level: advanced 907d4fe737eSStefano Zampini 908d4fe737eSStefano Zampini .seealso: ISGlobalToLocalMappingApply(), ISLocalToGlobalMappingCreate(), 909d4fe737eSStefano Zampini ISLocalToGlobalMappingDestroy() 910d4fe737eSStefano Zampini @*/ 911413f72f0SBarry Smith PetscErrorCode ISGlobalToLocalMappingApplyIS(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingMode type,IS is,IS *newis) 912d4fe737eSStefano Zampini { 913d4fe737eSStefano Zampini PetscInt n,nout,*idxout; 914d4fe737eSStefano Zampini const PetscInt *idxin; 915d4fe737eSStefano Zampini 916d4fe737eSStefano Zampini PetscFunctionBegin; 917d4fe737eSStefano Zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 918d4fe737eSStefano Zampini PetscValidHeaderSpecific(is,IS_CLASSID,3); 919d4fe737eSStefano Zampini PetscValidPointer(newis,4); 920d4fe737eSStefano Zampini 9219566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is,&n)); 9229566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is,&idxin)); 923d4fe737eSStefano Zampini if (type == IS_GTOLM_MASK) { 9249566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n,&idxout)); 925d4fe737eSStefano Zampini } else { 9269566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingApply(mapping,type,n,idxin,&nout,NULL)); 9279566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nout,&idxout)); 928d4fe737eSStefano Zampini } 9299566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingApply(mapping,type,n,idxin,&nout,idxout)); 9309566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is,&idxin)); 9319566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF,nout,idxout,PETSC_OWN_POINTER,newis)); 932d4fe737eSStefano Zampini PetscFunctionReturn(0); 933d4fe737eSStefano Zampini } 934d4fe737eSStefano Zampini 9359d90f715SBarry Smith /*@ 9369d90f715SBarry Smith ISGlobalToLocalMappingApplyBlock - Provides the local block numbering for a list of integers 9379d90f715SBarry Smith specified with a block global numbering. 9389d90f715SBarry Smith 9399d90f715SBarry Smith Not collective 9409d90f715SBarry Smith 9419d90f715SBarry Smith Input Parameters: 9429d90f715SBarry Smith + mapping - mapping between local and global numbering 9430040bde1SJunchao Zhang . type - IS_GTOLM_MASK - maps global indices with no local value to -1 in the output list (i.e., mask them) 9449d90f715SBarry Smith IS_GTOLM_DROP - drops the indices with no local value from the output list 9459d90f715SBarry Smith . n - number of global indices to map 9469d90f715SBarry Smith - idx - global indices to map 9479d90f715SBarry Smith 9489d90f715SBarry Smith Output Parameters: 9499d90f715SBarry Smith + nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n) 9509d90f715SBarry Smith - idxout - local index of each global index, one must pass in an array long enough 9519d90f715SBarry Smith to hold all the indices. You can call ISGlobalToLocalMappingApplyBlock() with 9529d90f715SBarry Smith idxout == NULL to determine the required length (returned in nout) 9539d90f715SBarry Smith and then allocate the required space and call ISGlobalToLocalMappingApplyBlock() 9549d90f715SBarry Smith a second time to set the values. 9559d90f715SBarry Smith 9569d90f715SBarry Smith Notes: 9579d90f715SBarry Smith Either nout or idxout may be NULL. idx and idxout may be identical. 9589d90f715SBarry Smith 9599a7b7924SJed Brown For "small" problems when using ISGlobalToLocalMappingApply() and ISGlobalToLocalMappingApplyBlock(), the ISLocalToGlobalMappingType of ISLOCALTOGLOBALMAPPINGBASIC will be used; 960413f72f0SBarry Smith this uses more memory but is faster; this approach is not scalable for extremely large mappings. For large problems ISLOCALTOGLOBALMAPPINGHASH is used, this is scalable. 961413f72f0SBarry Smith Use ISLocalToGlobalMappingSetType() or call ISLocalToGlobalMappingSetFromOptions() with the option -islocaltoglobalmapping_type <basic,hash> to control which is used. 9629d90f715SBarry Smith 9639d90f715SBarry Smith Level: advanced 9649d90f715SBarry Smith 9659d90f715SBarry Smith Developer Note: The manual page states that idx and idxout may be identical but the calling 9669d90f715SBarry Smith sequence declares idx as const so it cannot be the same as idxout. 9679d90f715SBarry Smith 9689d90f715SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISGlobalToLocalMappingApply(), ISLocalToGlobalMappingCreate(), 969413f72f0SBarry Smith ISLocalToGlobalMappingDestroy() 9709d90f715SBarry Smith @*/ 971413f72f0SBarry Smith PetscErrorCode ISGlobalToLocalMappingApplyBlock(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingMode type, 9729d90f715SBarry Smith PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[]) 9739d90f715SBarry Smith { 9743a40ed3dSBarry Smith PetscFunctionBegin; 9750700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 976413f72f0SBarry Smith if (!mapping->data) { 9779566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingSetUp(mapping)); 978d4bb536fSBarry Smith } 9799566063dSJacob Faibussowitsch PetscCall((*mapping->ops->globaltolocalmappingapplyblock)(mapping,type,n,idx,nout,idxout)); 9803a40ed3dSBarry Smith PetscFunctionReturn(0); 981d4bb536fSBarry Smith } 98290f02eecSBarry Smith 98389d82c54SBarry Smith /*@C 9846a818285SBarry Smith ISLocalToGlobalMappingGetBlockInfo - Gets the neighbor information for each processor and 98589d82c54SBarry Smith each index shared by more than one processor 98689d82c54SBarry Smith 98789d82c54SBarry Smith Collective on ISLocalToGlobalMapping 98889d82c54SBarry Smith 989f899ff85SJose E. Roman Input Parameter: 99089d82c54SBarry Smith . mapping - the mapping from local to global indexing 99189d82c54SBarry Smith 992d8d19677SJose E. Roman Output Parameters: 99389d82c54SBarry Smith + nproc - number of processors that are connected to this one 99489d82c54SBarry Smith . proc - neighboring processors 99507b52d57SBarry Smith . numproc - number of indices for each subdomain (processor) 9963463a7baSJed Brown - indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering) 99789d82c54SBarry Smith 99889d82c54SBarry Smith Level: advanced 99989d82c54SBarry Smith 10002cfcea29SBarry Smith Fortran Usage: 10012cfcea29SBarry Smith $ ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by 10022cfcea29SBarry Smith $ ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc], 10032cfcea29SBarry Smith PetscInt indices[nproc][numprocmax],ierr) 10042cfcea29SBarry Smith There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and 10052cfcea29SBarry Smith indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough. 10062cfcea29SBarry Smith 100707b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 100807b52d57SBarry Smith ISLocalToGlobalMappingRestoreInfo() 100989d82c54SBarry Smith @*/ 10106a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 101189d82c54SBarry Smith { 1012268a049cSStefano Zampini PetscFunctionBegin; 1013268a049cSStefano Zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 1014268a049cSStefano Zampini if (mapping->info_cached) { 1015268a049cSStefano Zampini *nproc = mapping->info_nproc; 1016268a049cSStefano Zampini *procs = mapping->info_procs; 1017268a049cSStefano Zampini *numprocs = mapping->info_numprocs; 1018268a049cSStefano Zampini *indices = mapping->info_indices; 1019268a049cSStefano Zampini } else { 10209566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetBlockInfo_Private(mapping,nproc,procs,numprocs,indices)); 1021268a049cSStefano Zampini } 1022268a049cSStefano Zampini PetscFunctionReturn(0); 1023268a049cSStefano Zampini } 1024268a049cSStefano Zampini 1025268a049cSStefano Zampini static PetscErrorCode ISLocalToGlobalMappingGetBlockInfo_Private(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 1026268a049cSStefano Zampini { 102797f1f81fSBarry Smith PetscMPIInt size,rank,tag1,tag2,tag3,*len,*source,imdex; 102832dcc486SBarry Smith PetscInt i,n = mapping->n,Ng,ng,max = 0,*lindices = mapping->indices; 102932dcc486SBarry Smith PetscInt *nprocs,*owner,nsends,*sends,j,*starts,nmax,nrecvs,*recvs,proc; 103097f1f81fSBarry Smith PetscInt cnt,scale,*ownedsenders,*nownedsenders,rstart,nowned; 103132dcc486SBarry Smith PetscInt node,nownedm,nt,*sends2,nsends2,*starts2,*lens2,*dest,nrecvs2,*starts3,*recvs2,k,*bprocs,*tmp; 103232dcc486SBarry Smith PetscInt first_procs,first_numprocs,*first_indices; 103389d82c54SBarry Smith MPI_Request *recv_waits,*send_waits; 103430dcb7c9SBarry Smith MPI_Status recv_status,*send_status,*recv_statuses; 1035ce94432eSBarry Smith MPI_Comm comm; 1036ace3abfcSBarry Smith PetscBool debug = PETSC_FALSE; 103789d82c54SBarry Smith 103889d82c54SBarry Smith PetscFunctionBegin; 10399566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)mapping,&comm)); 10409566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm,&size)); 10419566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm,&rank)); 104224cf384cSBarry Smith if (size == 1) { 104324cf384cSBarry Smith *nproc = 0; 10440298fd71SBarry Smith *procs = NULL; 10459566063dSJacob Faibussowitsch PetscCall(PetscNew(numprocs)); 10461e2105dcSBarry Smith (*numprocs)[0] = 0; 10479566063dSJacob Faibussowitsch PetscCall(PetscNew(indices)); 10480298fd71SBarry Smith (*indices)[0] = NULL; 1049268a049cSStefano Zampini /* save info for reuse */ 1050268a049cSStefano Zampini mapping->info_nproc = *nproc; 1051268a049cSStefano Zampini mapping->info_procs = *procs; 1052268a049cSStefano Zampini mapping->info_numprocs = *numprocs; 1053268a049cSStefano Zampini mapping->info_indices = *indices; 1054268a049cSStefano Zampini mapping->info_cached = PETSC_TRUE; 105524cf384cSBarry Smith PetscFunctionReturn(0); 105624cf384cSBarry Smith } 105724cf384cSBarry Smith 10589566063dSJacob Faibussowitsch PetscCall(PetscOptionsGetBool(((PetscObject)mapping)->options,NULL,"-islocaltoglobalmappinggetinfo_debug",&debug,NULL)); 105907b52d57SBarry Smith 10603677ff5aSBarry Smith /* 10616a818285SBarry Smith Notes on ISLocalToGlobalMappingGetBlockInfo 10623677ff5aSBarry Smith 10633677ff5aSBarry Smith globally owned node - the nodes that have been assigned to this processor in global 10643677ff5aSBarry Smith numbering, just for this routine. 10653677ff5aSBarry Smith 10663677ff5aSBarry Smith nontrivial globally owned node - node assigned to this processor that is on a subdomain 10673677ff5aSBarry Smith boundary (i.e. is has more than one local owner) 10683677ff5aSBarry Smith 10693677ff5aSBarry Smith locally owned node - node that exists on this processors subdomain 10703677ff5aSBarry Smith 10713677ff5aSBarry Smith nontrivial locally owned node - node that is not in the interior (i.e. has more than one 10723677ff5aSBarry Smith local subdomain 10733677ff5aSBarry Smith */ 10749566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)mapping,&tag1)); 10759566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)mapping,&tag2)); 10769566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)mapping,&tag3)); 107789d82c54SBarry Smith 107889d82c54SBarry Smith for (i=0; i<n; i++) { 107989d82c54SBarry Smith if (lindices[i] > max) max = lindices[i]; 108089d82c54SBarry Smith } 10811c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&max,&Ng,1,MPIU_INT,MPI_MAX,comm)); 108278058e43SBarry Smith Ng++; 10839566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm,&size)); 10849566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm,&rank)); 1085bc8ff85bSBarry Smith scale = Ng/size + 1; 1086a2e34c3dSBarry Smith ng = scale; if (rank == size-1) ng = Ng - scale*(size-1); ng = PetscMax(1,ng); 1087caba0dd0SBarry Smith rstart = scale*rank; 108889d82c54SBarry Smith 108989d82c54SBarry Smith /* determine ownership ranges of global indices */ 10909566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2*size,&nprocs)); 10919566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(nprocs,2*size)); 109289d82c54SBarry Smith 109389d82c54SBarry Smith /* determine owners of each local node */ 10949566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n,&owner)); 109589d82c54SBarry Smith for (i=0; i<n; i++) { 10963677ff5aSBarry Smith proc = lindices[i]/scale; /* processor that globally owns this index */ 109727c402fcSBarry Smith nprocs[2*proc+1] = 1; /* processor globally owns at least one of ours */ 10983677ff5aSBarry Smith owner[i] = proc; 109927c402fcSBarry Smith nprocs[2*proc]++; /* count of how many that processor globally owns of ours */ 110089d82c54SBarry Smith } 110127c402fcSBarry Smith nsends = 0; for (i=0; i<size; i++) nsends += nprocs[2*i+1]; 11029566063dSJacob Faibussowitsch PetscCall(PetscInfo(mapping,"Number of global owners for my local data %" PetscInt_FMT "\n",nsends)); 110389d82c54SBarry Smith 110489d82c54SBarry Smith /* inform other processors of number of messages and max length*/ 11059566063dSJacob Faibussowitsch PetscCall(PetscMaxSum(comm,nprocs,&nmax,&nrecvs)); 11069566063dSJacob Faibussowitsch PetscCall(PetscInfo(mapping,"Number of local owners for my global data %" PetscInt_FMT "\n",nrecvs)); 110789d82c54SBarry Smith 110889d82c54SBarry Smith /* post receives for owned rows */ 11099566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((2*nrecvs+1)*(nmax+1),&recvs)); 11109566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs+1,&recv_waits)); 111189d82c54SBarry Smith for (i=0; i<nrecvs; i++) { 11129566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvs+2*nmax*i,2*nmax,MPIU_INT,MPI_ANY_SOURCE,tag1,comm,recv_waits+i)); 111389d82c54SBarry Smith } 111489d82c54SBarry Smith 111589d82c54SBarry Smith /* pack messages containing lists of local nodes to owners */ 11169566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(2*n+1,&sends)); 11179566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size+1,&starts)); 111889d82c54SBarry Smith starts[0] = 0; 1119f6e5521dSKarl Rupp for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2]; 112089d82c54SBarry Smith for (i=0; i<n; i++) { 112189d82c54SBarry Smith sends[starts[owner[i]]++] = lindices[i]; 112230dcb7c9SBarry Smith sends[starts[owner[i]]++] = i; 112389d82c54SBarry Smith } 11249566063dSJacob Faibussowitsch PetscCall(PetscFree(owner)); 112589d82c54SBarry Smith starts[0] = 0; 1126f6e5521dSKarl Rupp for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2]; 112789d82c54SBarry Smith 112889d82c54SBarry Smith /* send the messages */ 11299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends+1,&send_waits)); 11309566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends+1,&dest)); 113189d82c54SBarry Smith cnt = 0; 113289d82c54SBarry Smith for (i=0; i<size; i++) { 113327c402fcSBarry Smith if (nprocs[2*i]) { 11349566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sends+starts[i],2*nprocs[2*i],MPIU_INT,i,tag1,comm,send_waits+cnt)); 113530dcb7c9SBarry Smith dest[cnt] = i; 113689d82c54SBarry Smith cnt++; 113789d82c54SBarry Smith } 113889d82c54SBarry Smith } 11399566063dSJacob Faibussowitsch PetscCall(PetscFree(starts)); 114089d82c54SBarry Smith 114189d82c54SBarry Smith /* wait on receives */ 11429566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs+1,&source)); 11439566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs+1,&len)); 114489d82c54SBarry Smith cnt = nrecvs; 11459566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(ng+1,&nownedsenders)); 114689d82c54SBarry Smith while (cnt) { 11479566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status)); 114889d82c54SBarry Smith /* unpack receives into our local space */ 11499566063dSJacob Faibussowitsch PetscCallMPI(MPI_Get_count(&recv_status,MPIU_INT,&len[imdex])); 115089d82c54SBarry Smith source[imdex] = recv_status.MPI_SOURCE; 115130dcb7c9SBarry Smith len[imdex] = len[imdex]/2; 1152caba0dd0SBarry Smith /* count how many local owners for each of my global owned indices */ 115330dcb7c9SBarry Smith for (i=0; i<len[imdex]; i++) nownedsenders[recvs[2*imdex*nmax+2*i]-rstart]++; 115489d82c54SBarry Smith cnt--; 115589d82c54SBarry Smith } 11569566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_waits)); 115789d82c54SBarry Smith 115830dcb7c9SBarry Smith /* count how many globally owned indices are on an edge multiplied by how many processors own them. */ 1159bc8ff85bSBarry Smith nowned = 0; 1160bc8ff85bSBarry Smith nownedm = 0; 1161bc8ff85bSBarry Smith for (i=0; i<ng; i++) { 1162bc8ff85bSBarry Smith if (nownedsenders[i] > 1) {nownedm += nownedsenders[i]; nowned++;} 1163bc8ff85bSBarry Smith } 1164bc8ff85bSBarry Smith 1165bc8ff85bSBarry Smith /* create single array to contain rank of all local owners of each globally owned index */ 11669566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nownedm+1,&ownedsenders)); 11679566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(ng+1,&starts)); 1168bc8ff85bSBarry Smith starts[0] = 0; 1169bc8ff85bSBarry Smith for (i=1; i<ng; i++) { 1170bc8ff85bSBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 1171bc8ff85bSBarry Smith else starts[i] = starts[i-1]; 1172bc8ff85bSBarry Smith } 1173bc8ff85bSBarry Smith 117430dcb7c9SBarry Smith /* for each nontrival globally owned node list all arriving processors */ 1175bc8ff85bSBarry Smith for (i=0; i<nrecvs; i++) { 1176bc8ff85bSBarry Smith for (j=0; j<len[i]; j++) { 117730dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 1178f6e5521dSKarl Rupp if (nownedsenders[node] > 1) ownedsenders[starts[node]++] = source[i]; 1179bc8ff85bSBarry Smith } 1180bc8ff85bSBarry Smith } 1181bc8ff85bSBarry Smith 118207b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 118330dcb7c9SBarry Smith starts[0] = 0; 118430dcb7c9SBarry Smith for (i=1; i<ng; i++) { 118530dcb7c9SBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 118630dcb7c9SBarry Smith else starts[i] = starts[i-1]; 118730dcb7c9SBarry Smith } 118830dcb7c9SBarry Smith for (i=0; i<ng; i++) { 118930dcb7c9SBarry Smith if (nownedsenders[i] > 1) { 11909566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"[%d] global node %" PetscInt_FMT " local owner processors: ",rank,i+rstart)); 119130dcb7c9SBarry Smith for (j=0; j<nownedsenders[i]; j++) { 11929566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"%" PetscInt_FMT " ",ownedsenders[starts[i]+j])); 119330dcb7c9SBarry Smith } 11949566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"\n")); 119530dcb7c9SBarry Smith } 119630dcb7c9SBarry Smith } 11979566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(comm,PETSC_STDOUT)); 119807b52d57SBarry Smith } /* ----------------------------------- */ 119930dcb7c9SBarry Smith 12003677ff5aSBarry Smith /* wait on original sends */ 12013a96401aSBarry Smith if (nsends) { 12029566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends,&send_status)); 12039566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(nsends,send_waits,send_status)); 12049566063dSJacob Faibussowitsch PetscCall(PetscFree(send_status)); 12053a96401aSBarry Smith } 12069566063dSJacob Faibussowitsch PetscCall(PetscFree(send_waits)); 12079566063dSJacob Faibussowitsch PetscCall(PetscFree(sends)); 12089566063dSJacob Faibussowitsch PetscCall(PetscFree(nprocs)); 12093677ff5aSBarry Smith 12103677ff5aSBarry Smith /* pack messages to send back to local owners */ 121130dcb7c9SBarry Smith starts[0] = 0; 121230dcb7c9SBarry Smith for (i=1; i<ng; i++) { 121330dcb7c9SBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 121430dcb7c9SBarry Smith else starts[i] = starts[i-1]; 121530dcb7c9SBarry Smith } 121630dcb7c9SBarry Smith nsends2 = nrecvs; 12179566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends2+1,&nprocs)); /* length of each message */ 121830dcb7c9SBarry Smith for (i=0; i<nrecvs; i++) { 121930dcb7c9SBarry Smith nprocs[i] = 1; 122030dcb7c9SBarry Smith for (j=0; j<len[i]; j++) { 122130dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 1222f6e5521dSKarl Rupp if (nownedsenders[node] > 1) nprocs[i] += 2 + nownedsenders[node]; 122330dcb7c9SBarry Smith } 122430dcb7c9SBarry Smith } 1225f6e5521dSKarl Rupp nt = 0; 1226f6e5521dSKarl Rupp for (i=0; i<nsends2; i++) nt += nprocs[i]; 1227f6e5521dSKarl Rupp 12289566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nt+1,&sends2)); 12299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends2+1,&starts2)); 1230f6e5521dSKarl Rupp 1231f6e5521dSKarl Rupp starts2[0] = 0; 1232f6e5521dSKarl Rupp for (i=1; i<nsends2; i++) starts2[i] = starts2[i-1] + nprocs[i-1]; 123330dcb7c9SBarry Smith /* 123430dcb7c9SBarry Smith Each message is 1 + nprocs[i] long, and consists of 123530dcb7c9SBarry Smith (0) the number of nodes being sent back 123630dcb7c9SBarry Smith (1) the local node number, 123730dcb7c9SBarry Smith (2) the number of processors sharing it, 123830dcb7c9SBarry Smith (3) the processors sharing it 123930dcb7c9SBarry Smith */ 124030dcb7c9SBarry Smith for (i=0; i<nsends2; i++) { 124130dcb7c9SBarry Smith cnt = 1; 124230dcb7c9SBarry Smith sends2[starts2[i]] = 0; 124330dcb7c9SBarry Smith for (j=0; j<len[i]; j++) { 124430dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 124530dcb7c9SBarry Smith if (nownedsenders[node] > 1) { 124630dcb7c9SBarry Smith sends2[starts2[i]]++; 124730dcb7c9SBarry Smith sends2[starts2[i]+cnt++] = recvs[2*i*nmax+2*j+1]; 124830dcb7c9SBarry Smith sends2[starts2[i]+cnt++] = nownedsenders[node]; 12499566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&sends2[starts2[i]+cnt],&ownedsenders[starts[node]],nownedsenders[node])); 125030dcb7c9SBarry Smith cnt += nownedsenders[node]; 125130dcb7c9SBarry Smith } 125230dcb7c9SBarry Smith } 125330dcb7c9SBarry Smith } 125430dcb7c9SBarry Smith 125530dcb7c9SBarry Smith /* receive the message lengths */ 125630dcb7c9SBarry Smith nrecvs2 = nsends; 12579566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2+1,&lens2)); 12589566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2+1,&starts3)); 12599566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2+1,&recv_waits)); 126030dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 12619566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(&lens2[i],1,MPIU_INT,dest[i],tag2,comm,recv_waits+i)); 126230dcb7c9SBarry Smith } 1263d44834fbSBarry Smith 12648a8e0b3aSBarry Smith /* send the message lengths */ 12658a8e0b3aSBarry Smith for (i=0; i<nsends2; i++) { 12669566063dSJacob Faibussowitsch PetscCallMPI(MPI_Send(&nprocs[i],1,MPIU_INT,source[i],tag2,comm)); 12678a8e0b3aSBarry Smith } 12688a8e0b3aSBarry Smith 1269d44834fbSBarry Smith /* wait on receives of lens */ 12700c468ba9SBarry Smith if (nrecvs2) { 12719566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2,&recv_statuses)); 12729566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(nrecvs2,recv_waits,recv_statuses)); 12739566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_statuses)); 12740c468ba9SBarry Smith } 12759566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_waits)); 1276d44834fbSBarry Smith 127730dcb7c9SBarry Smith starts3[0] = 0; 1278d44834fbSBarry Smith nt = 0; 127930dcb7c9SBarry Smith for (i=0; i<nrecvs2-1; i++) { 128030dcb7c9SBarry Smith starts3[i+1] = starts3[i] + lens2[i]; 1281d44834fbSBarry Smith nt += lens2[i]; 128230dcb7c9SBarry Smith } 128376466f69SStefano Zampini if (nrecvs2) nt += lens2[nrecvs2-1]; 1284d44834fbSBarry Smith 12859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nt+1,&recvs2)); 12869566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2+1,&recv_waits)); 128752b72c4aSBarry Smith for (i=0; i<nrecvs2; i++) { 12889566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvs2+starts3[i],lens2[i],MPIU_INT,dest[i],tag3,comm,recv_waits+i)); 128930dcb7c9SBarry Smith } 129030dcb7c9SBarry Smith 129130dcb7c9SBarry Smith /* send the messages */ 12929566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends2+1,&send_waits)); 129330dcb7c9SBarry Smith for (i=0; i<nsends2; i++) { 12949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sends2+starts2[i],nprocs[i],MPIU_INT,source[i],tag3,comm,send_waits+i)); 129530dcb7c9SBarry Smith } 129630dcb7c9SBarry Smith 129730dcb7c9SBarry Smith /* wait on receives */ 12980c468ba9SBarry Smith if (nrecvs2) { 12999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nrecvs2,&recv_statuses)); 13009566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(nrecvs2,recv_waits,recv_statuses)); 13019566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_statuses)); 13020c468ba9SBarry Smith } 13039566063dSJacob Faibussowitsch PetscCall(PetscFree(recv_waits)); 13049566063dSJacob Faibussowitsch PetscCall(PetscFree(nprocs)); 130530dcb7c9SBarry Smith 130607b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 130730dcb7c9SBarry Smith cnt = 0; 130830dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 130930dcb7c9SBarry Smith nt = recvs2[cnt++]; 131030dcb7c9SBarry Smith for (j=0; j<nt; j++) { 13119566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"[%d] local node %" PetscInt_FMT " number of subdomains %" PetscInt_FMT ": ",rank,recvs2[cnt],recvs2[cnt+1])); 131230dcb7c9SBarry Smith for (k=0; k<recvs2[cnt+1]; k++) { 13139566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"%" PetscInt_FMT " ",recvs2[cnt+2+k])); 131430dcb7c9SBarry Smith } 131530dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 13169566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"\n")); 131730dcb7c9SBarry Smith } 131830dcb7c9SBarry Smith } 13199566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(comm,PETSC_STDOUT)); 132007b52d57SBarry Smith } /* ----------------------------------- */ 132130dcb7c9SBarry Smith 132230dcb7c9SBarry Smith /* count number subdomains for each local node */ 13239566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(size,&nprocs)); 132430dcb7c9SBarry Smith cnt = 0; 132530dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 132630dcb7c9SBarry Smith nt = recvs2[cnt++]; 132730dcb7c9SBarry Smith for (j=0; j<nt; j++) { 1328f6e5521dSKarl Rupp for (k=0; k<recvs2[cnt+1]; k++) nprocs[recvs2[cnt+2+k]]++; 132930dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 133030dcb7c9SBarry Smith } 133130dcb7c9SBarry Smith } 133230dcb7c9SBarry Smith nt = 0; for (i=0; i<size; i++) nt += (nprocs[i] > 0); 133330dcb7c9SBarry Smith *nproc = nt; 13349566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nt+1,procs)); 13359566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nt+1,numprocs)); 13369566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nt+1,indices)); 13370298fd71SBarry Smith for (i=0;i<nt+1;i++) (*indices)[i]=NULL; 13389566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(size,&bprocs)); 133930dcb7c9SBarry Smith cnt = 0; 134030dcb7c9SBarry Smith for (i=0; i<size; i++) { 134130dcb7c9SBarry Smith if (nprocs[i] > 0) { 134230dcb7c9SBarry Smith bprocs[i] = cnt; 134330dcb7c9SBarry Smith (*procs)[cnt] = i; 134430dcb7c9SBarry Smith (*numprocs)[cnt] = nprocs[i]; 13459566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nprocs[i],&(*indices)[cnt])); 134630dcb7c9SBarry Smith cnt++; 134730dcb7c9SBarry Smith } 134830dcb7c9SBarry Smith } 134930dcb7c9SBarry Smith 135030dcb7c9SBarry Smith /* make the list of subdomains for each nontrivial local node */ 13519566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(*numprocs,nt)); 135230dcb7c9SBarry Smith cnt = 0; 135330dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 135430dcb7c9SBarry Smith nt = recvs2[cnt++]; 135530dcb7c9SBarry Smith for (j=0; j<nt; j++) { 1356f6e5521dSKarl Rupp for (k=0; k<recvs2[cnt+1]; k++) (*indices)[bprocs[recvs2[cnt+2+k]]][(*numprocs)[bprocs[recvs2[cnt+2+k]]]++] = recvs2[cnt]; 135730dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 135830dcb7c9SBarry Smith } 135930dcb7c9SBarry Smith } 13609566063dSJacob Faibussowitsch PetscCall(PetscFree(bprocs)); 13619566063dSJacob Faibussowitsch PetscCall(PetscFree(recvs2)); 136230dcb7c9SBarry Smith 136307b52d57SBarry Smith /* sort the node indexing by their global numbers */ 136407b52d57SBarry Smith nt = *nproc; 136507b52d57SBarry Smith for (i=0; i<nt; i++) { 13669566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*numprocs)[i],&tmp)); 1367f6e5521dSKarl Rupp for (j=0; j<(*numprocs)[i]; j++) tmp[j] = lindices[(*indices)[i][j]]; 13689566063dSJacob Faibussowitsch PetscCall(PetscSortIntWithArray((*numprocs)[i],tmp,(*indices)[i])); 13699566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp)); 137007b52d57SBarry Smith } 137107b52d57SBarry Smith 137207b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 137330dcb7c9SBarry Smith nt = *nproc; 137430dcb7c9SBarry Smith for (i=0; i<nt; i++) { 13759566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"[%d] subdomain %" PetscInt_FMT " number of indices %" PetscInt_FMT ": ",rank,(*procs)[i],(*numprocs)[i])); 137630dcb7c9SBarry Smith for (j=0; j<(*numprocs)[i]; j++) { 13779566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"%" PetscInt_FMT " ",(*indices)[i][j])); 137830dcb7c9SBarry Smith } 13799566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedPrintf(comm,"\n")); 138030dcb7c9SBarry Smith } 13819566063dSJacob Faibussowitsch PetscCall(PetscSynchronizedFlush(comm,PETSC_STDOUT)); 138207b52d57SBarry Smith } /* ----------------------------------- */ 138330dcb7c9SBarry Smith 138430dcb7c9SBarry Smith /* wait on sends */ 138530dcb7c9SBarry Smith if (nsends2) { 13869566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nsends2,&send_status)); 13879566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(nsends2,send_waits,send_status)); 13889566063dSJacob Faibussowitsch PetscCall(PetscFree(send_status)); 138930dcb7c9SBarry Smith } 139030dcb7c9SBarry Smith 13919566063dSJacob Faibussowitsch PetscCall(PetscFree(starts3)); 13929566063dSJacob Faibussowitsch PetscCall(PetscFree(dest)); 13939566063dSJacob Faibussowitsch PetscCall(PetscFree(send_waits)); 13943677ff5aSBarry Smith 13959566063dSJacob Faibussowitsch PetscCall(PetscFree(nownedsenders)); 13969566063dSJacob Faibussowitsch PetscCall(PetscFree(ownedsenders)); 13979566063dSJacob Faibussowitsch PetscCall(PetscFree(starts)); 13989566063dSJacob Faibussowitsch PetscCall(PetscFree(starts2)); 13999566063dSJacob Faibussowitsch PetscCall(PetscFree(lens2)); 140089d82c54SBarry Smith 14019566063dSJacob Faibussowitsch PetscCall(PetscFree(source)); 14029566063dSJacob Faibussowitsch PetscCall(PetscFree(len)); 14039566063dSJacob Faibussowitsch PetscCall(PetscFree(recvs)); 14049566063dSJacob Faibussowitsch PetscCall(PetscFree(nprocs)); 14059566063dSJacob Faibussowitsch PetscCall(PetscFree(sends2)); 140624cf384cSBarry Smith 140724cf384cSBarry Smith /* put the information about myself as the first entry in the list */ 140824cf384cSBarry Smith first_procs = (*procs)[0]; 140924cf384cSBarry Smith first_numprocs = (*numprocs)[0]; 141024cf384cSBarry Smith first_indices = (*indices)[0]; 141124cf384cSBarry Smith for (i=0; i<*nproc; i++) { 141224cf384cSBarry Smith if ((*procs)[i] == rank) { 141324cf384cSBarry Smith (*procs)[0] = (*procs)[i]; 141424cf384cSBarry Smith (*numprocs)[0] = (*numprocs)[i]; 141524cf384cSBarry Smith (*indices)[0] = (*indices)[i]; 141624cf384cSBarry Smith (*procs)[i] = first_procs; 141724cf384cSBarry Smith (*numprocs)[i] = first_numprocs; 141824cf384cSBarry Smith (*indices)[i] = first_indices; 141924cf384cSBarry Smith break; 142024cf384cSBarry Smith } 142124cf384cSBarry Smith } 1422268a049cSStefano Zampini 1423268a049cSStefano Zampini /* save info for reuse */ 1424268a049cSStefano Zampini mapping->info_nproc = *nproc; 1425268a049cSStefano Zampini mapping->info_procs = *procs; 1426268a049cSStefano Zampini mapping->info_numprocs = *numprocs; 1427268a049cSStefano Zampini mapping->info_indices = *indices; 1428268a049cSStefano Zampini mapping->info_cached = PETSC_TRUE; 142989d82c54SBarry Smith PetscFunctionReturn(0); 143089d82c54SBarry Smith } 143189d82c54SBarry Smith 14326a818285SBarry Smith /*@C 14336a818285SBarry Smith ISLocalToGlobalMappingRestoreBlockInfo - Frees the memory allocated by ISLocalToGlobalMappingGetBlockInfo() 14346a818285SBarry Smith 14356a818285SBarry Smith Collective on ISLocalToGlobalMapping 14366a818285SBarry Smith 1437f899ff85SJose E. Roman Input Parameter: 14386a818285SBarry Smith . mapping - the mapping from local to global indexing 14396a818285SBarry Smith 1440d8d19677SJose E. Roman Output Parameters: 14416a818285SBarry Smith + nproc - number of processors that are connected to this one 14426a818285SBarry Smith . proc - neighboring processors 14436a818285SBarry Smith . numproc - number of indices for each processor 14446a818285SBarry Smith - indices - indices of local nodes shared with neighbor (sorted by global numbering) 14456a818285SBarry Smith 14466a818285SBarry Smith Level: advanced 14476a818285SBarry Smith 14486a818285SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 14496a818285SBarry Smith ISLocalToGlobalMappingGetInfo() 14506a818285SBarry Smith @*/ 14516a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreBlockInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 14526a818285SBarry Smith { 14536a818285SBarry Smith PetscFunctionBegin; 1454cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 1455268a049cSStefano Zampini if (mapping->info_free) { 14569566063dSJacob Faibussowitsch PetscCall(PetscFree(*numprocs)); 14576a818285SBarry Smith if (*indices) { 1458268a049cSStefano Zampini PetscInt i; 1459268a049cSStefano Zampini 14609566063dSJacob Faibussowitsch PetscCall(PetscFree((*indices)[0])); 14616a818285SBarry Smith for (i=1; i<*nproc; i++) { 14629566063dSJacob Faibussowitsch PetscCall(PetscFree((*indices)[i])); 14636a818285SBarry Smith } 14649566063dSJacob Faibussowitsch PetscCall(PetscFree(*indices)); 14656a818285SBarry Smith } 1466268a049cSStefano Zampini } 1467268a049cSStefano Zampini *nproc = 0; 1468268a049cSStefano Zampini *procs = NULL; 1469268a049cSStefano Zampini *numprocs = NULL; 1470268a049cSStefano Zampini *indices = NULL; 14716a818285SBarry Smith PetscFunctionReturn(0); 14726a818285SBarry Smith } 14736a818285SBarry Smith 14746a818285SBarry Smith /*@C 14756a818285SBarry Smith ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each processor and 14766a818285SBarry Smith each index shared by more than one processor 14776a818285SBarry Smith 14786a818285SBarry Smith Collective on ISLocalToGlobalMapping 14796a818285SBarry Smith 1480f899ff85SJose E. Roman Input Parameter: 14816a818285SBarry Smith . mapping - the mapping from local to global indexing 14826a818285SBarry Smith 1483d8d19677SJose E. Roman Output Parameters: 14846a818285SBarry Smith + nproc - number of processors that are connected to this one 14856a818285SBarry Smith . proc - neighboring processors 14866a818285SBarry Smith . numproc - number of indices for each subdomain (processor) 14876a818285SBarry Smith - indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering) 14886a818285SBarry Smith 14896a818285SBarry Smith Level: advanced 14906a818285SBarry Smith 14911bd0b88eSStefano Zampini Notes: The user needs to call ISLocalToGlobalMappingRestoreInfo when the data is no longer needed. 14921bd0b88eSStefano Zampini 14936a818285SBarry Smith Fortran Usage: 14946a818285SBarry Smith $ ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by 14956a818285SBarry Smith $ ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc], 14966a818285SBarry Smith PetscInt indices[nproc][numprocmax],ierr) 14976a818285SBarry Smith There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and 14986a818285SBarry Smith indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough. 14996a818285SBarry Smith 15006a818285SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 15016a818285SBarry Smith ISLocalToGlobalMappingRestoreInfo() 15026a818285SBarry Smith @*/ 15036a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 15046a818285SBarry Smith { 15058a1f772fSStefano Zampini PetscInt **bindices = NULL,*bnumprocs = NULL,bs,i,j,k; 15066a818285SBarry Smith 15076a818285SBarry Smith PetscFunctionBegin; 15086a818285SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 15098a1f772fSStefano Zampini bs = mapping->bs; 15109566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetBlockInfo(mapping,nproc,procs,&bnumprocs,&bindices)); 1511268a049cSStefano Zampini if (bs > 1) { /* we need to expand the cached info */ 15129566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(*nproc,&*indices)); 15139566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(*nproc,&*numprocs)); 15146a818285SBarry Smith for (i=0; i<*nproc; i++) { 15159566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(bs*bnumprocs[i],&(*indices)[i])); 1516268a049cSStefano Zampini for (j=0; j<bnumprocs[i]; j++) { 15176a818285SBarry Smith for (k=0; k<bs; k++) { 15186a818285SBarry Smith (*indices)[i][j*bs+k] = bs*bindices[i][j] + k; 15196a818285SBarry Smith } 15206a818285SBarry Smith } 1521268a049cSStefano Zampini (*numprocs)[i] = bnumprocs[i]*bs; 15226a818285SBarry Smith } 1523268a049cSStefano Zampini mapping->info_free = PETSC_TRUE; 1524268a049cSStefano Zampini } else { 1525268a049cSStefano Zampini *numprocs = bnumprocs; 1526268a049cSStefano Zampini *indices = bindices; 15276a818285SBarry Smith } 15286a818285SBarry Smith PetscFunctionReturn(0); 15296a818285SBarry Smith } 15306a818285SBarry Smith 153107b52d57SBarry Smith /*@C 153207b52d57SBarry Smith ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by ISLocalToGlobalMappingGetInfo() 153389d82c54SBarry Smith 153407b52d57SBarry Smith Collective on ISLocalToGlobalMapping 153507b52d57SBarry Smith 1536f899ff85SJose E. Roman Input Parameter: 153707b52d57SBarry Smith . mapping - the mapping from local to global indexing 153807b52d57SBarry Smith 1539d8d19677SJose E. Roman Output Parameters: 154007b52d57SBarry Smith + nproc - number of processors that are connected to this one 154107b52d57SBarry Smith . proc - neighboring processors 154207b52d57SBarry Smith . numproc - number of indices for each processor 154307b52d57SBarry Smith - indices - indices of local nodes shared with neighbor (sorted by global numbering) 154407b52d57SBarry Smith 154507b52d57SBarry Smith Level: advanced 154607b52d57SBarry Smith 154707b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 154807b52d57SBarry Smith ISLocalToGlobalMappingGetInfo() 154907b52d57SBarry Smith @*/ 15507087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 155107b52d57SBarry Smith { 155207b52d57SBarry Smith PetscFunctionBegin; 15539566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreBlockInfo(mapping,nproc,procs,numprocs,indices)); 155407b52d57SBarry Smith PetscFunctionReturn(0); 155507b52d57SBarry Smith } 155686994e45SJed Brown 155786994e45SJed Brown /*@C 15581bd0b88eSStefano Zampini ISLocalToGlobalMappingGetNodeInfo - Gets the neighbor information for each node 15591bd0b88eSStefano Zampini 15601bd0b88eSStefano Zampini Collective on ISLocalToGlobalMapping 15611bd0b88eSStefano Zampini 1562f899ff85SJose E. Roman Input Parameter: 15631bd0b88eSStefano Zampini . mapping - the mapping from local to global indexing 15641bd0b88eSStefano Zampini 1565d8d19677SJose E. Roman Output Parameters: 15661bd0b88eSStefano Zampini + nnodes - number of local nodes (same ISLocalToGlobalMappingGetSize()) 15671bd0b88eSStefano Zampini . count - number of neighboring processors per node 15681bd0b88eSStefano Zampini - indices - indices of processes sharing the node (sorted) 15691bd0b88eSStefano Zampini 15701bd0b88eSStefano Zampini Level: advanced 15711bd0b88eSStefano Zampini 15721bd0b88eSStefano Zampini Notes: The user needs to call ISLocalToGlobalMappingRestoreInfo when the data is no longer needed. 15731bd0b88eSStefano Zampini 15741bd0b88eSStefano Zampini .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 15751bd0b88eSStefano Zampini ISLocalToGlobalMappingGetInfo(), ISLocalToGlobalMappingRestoreNodeInfo() 15761bd0b88eSStefano Zampini @*/ 15771bd0b88eSStefano Zampini PetscErrorCode ISLocalToGlobalMappingGetNodeInfo(ISLocalToGlobalMapping mapping,PetscInt *nnodes,PetscInt *count[],PetscInt **indices[]) 15781bd0b88eSStefano Zampini { 15791bd0b88eSStefano Zampini PetscInt n; 15801bd0b88eSStefano Zampini 15811bd0b88eSStefano Zampini PetscFunctionBegin; 15821bd0b88eSStefano Zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 15839566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(mapping,&n)); 15841bd0b88eSStefano Zampini if (!mapping->info_nodec) { 15851bd0b88eSStefano Zampini PetscInt i,m,n_neigh,*neigh,*n_shared,**shared; 15861bd0b88eSStefano Zampini 15879566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n+1,&mapping->info_nodec,n,&mapping->info_nodei)); 15889566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetInfo(mapping,&n_neigh,&neigh,&n_shared,&shared)); 1589071fcb05SBarry Smith for (i=0;i<n;i++) { mapping->info_nodec[i] = 1;} 1590071fcb05SBarry Smith m = n; 1591071fcb05SBarry Smith mapping->info_nodec[n] = 0; 15921bd0b88eSStefano Zampini for (i=1;i<n_neigh;i++) { 15931bd0b88eSStefano Zampini PetscInt j; 15941bd0b88eSStefano Zampini 15951bd0b88eSStefano Zampini m += n_shared[i]; 15961bd0b88eSStefano Zampini for (j=0;j<n_shared[i];j++) mapping->info_nodec[shared[i][j]] += 1; 15971bd0b88eSStefano Zampini } 15989566063dSJacob Faibussowitsch if (n) PetscCall(PetscMalloc1(m,&mapping->info_nodei[0])); 15991bd0b88eSStefano Zampini for (i=1;i<n;i++) mapping->info_nodei[i] = mapping->info_nodei[i-1] + mapping->info_nodec[i-1]; 16009566063dSJacob Faibussowitsch PetscCall(PetscArrayzero(mapping->info_nodec,n)); 16011bd0b88eSStefano Zampini for (i=0;i<n;i++) { mapping->info_nodec[i] = 1; mapping->info_nodei[i][0] = neigh[0]; } 16021bd0b88eSStefano Zampini for (i=1;i<n_neigh;i++) { 16031bd0b88eSStefano Zampini PetscInt j; 16041bd0b88eSStefano Zampini 16051bd0b88eSStefano Zampini for (j=0;j<n_shared[i];j++) { 16061bd0b88eSStefano Zampini PetscInt k = shared[i][j]; 16071bd0b88eSStefano Zampini 16081bd0b88eSStefano Zampini mapping->info_nodei[k][mapping->info_nodec[k]] = neigh[i]; 16091bd0b88eSStefano Zampini mapping->info_nodec[k] += 1; 16101bd0b88eSStefano Zampini } 16111bd0b88eSStefano Zampini } 16129566063dSJacob Faibussowitsch for (i=0;i<n;i++) PetscCall(PetscSortRemoveDupsInt(&mapping->info_nodec[i],mapping->info_nodei[i])); 16139566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreInfo(mapping,&n_neigh,&neigh,&n_shared,&shared)); 16141bd0b88eSStefano Zampini } 16151bd0b88eSStefano Zampini if (nnodes) *nnodes = n; 16161bd0b88eSStefano Zampini if (count) *count = mapping->info_nodec; 16171bd0b88eSStefano Zampini if (indices) *indices = mapping->info_nodei; 16181bd0b88eSStefano Zampini PetscFunctionReturn(0); 16191bd0b88eSStefano Zampini } 16201bd0b88eSStefano Zampini 16211bd0b88eSStefano Zampini /*@C 16221bd0b88eSStefano Zampini ISLocalToGlobalMappingRestoreNodeInfo - Frees the memory allocated by ISLocalToGlobalMappingGetNodeInfo() 16231bd0b88eSStefano Zampini 16241bd0b88eSStefano Zampini Collective on ISLocalToGlobalMapping 16251bd0b88eSStefano Zampini 1626f899ff85SJose E. Roman Input Parameter: 16271bd0b88eSStefano Zampini . mapping - the mapping from local to global indexing 16281bd0b88eSStefano Zampini 1629d8d19677SJose E. Roman Output Parameters: 16301bd0b88eSStefano Zampini + nnodes - number of local nodes 16311bd0b88eSStefano Zampini . count - number of neighboring processors per node 16321bd0b88eSStefano Zampini - indices - indices of processes sharing the node (sorted) 16331bd0b88eSStefano Zampini 16341bd0b88eSStefano Zampini Level: advanced 16351bd0b88eSStefano Zampini 16361bd0b88eSStefano Zampini .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 16371bd0b88eSStefano Zampini ISLocalToGlobalMappingGetInfo() 16381bd0b88eSStefano Zampini @*/ 16391bd0b88eSStefano Zampini PetscErrorCode ISLocalToGlobalMappingRestoreNodeInfo(ISLocalToGlobalMapping mapping,PetscInt *nnodes,PetscInt *count[],PetscInt **indices[]) 16401bd0b88eSStefano Zampini { 16411bd0b88eSStefano Zampini PetscFunctionBegin; 16421bd0b88eSStefano Zampini PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 16431bd0b88eSStefano Zampini if (nnodes) *nnodes = 0; 16441bd0b88eSStefano Zampini if (count) *count = NULL; 16451bd0b88eSStefano Zampini if (indices) *indices = NULL; 16461bd0b88eSStefano Zampini PetscFunctionReturn(0); 16471bd0b88eSStefano Zampini } 16481bd0b88eSStefano Zampini 16491bd0b88eSStefano Zampini /*@C 1650107e9a97SBarry Smith ISLocalToGlobalMappingGetIndices - Get global indices for every local point that is mapped 165186994e45SJed Brown 165286994e45SJed Brown Not Collective 165386994e45SJed Brown 16544165533cSJose E. Roman Input Parameter: 165586994e45SJed Brown . ltog - local to global mapping 165686994e45SJed Brown 16574165533cSJose E. Roman Output Parameter: 1658565245c5SBarry Smith . array - array of indices, the length of this array may be obtained with ISLocalToGlobalMappingGetSize() 165986994e45SJed Brown 166086994e45SJed Brown Level: advanced 166186994e45SJed Brown 166295452b02SPatrick Sanan Notes: 166395452b02SPatrick Sanan ISLocalToGlobalMappingGetSize() returns the length the this array 1664107e9a97SBarry Smith 1665107e9a97SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreIndices(), ISLocalToGlobalMappingGetBlockIndices(), ISLocalToGlobalMappingRestoreBlockIndices() 166686994e45SJed Brown @*/ 16677087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 166886994e45SJed Brown { 166986994e45SJed Brown PetscFunctionBegin; 167086994e45SJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 167186994e45SJed Brown PetscValidPointer(array,2); 167245b6f7e9SBarry Smith if (ltog->bs == 1) { 167386994e45SJed Brown *array = ltog->indices; 167445b6f7e9SBarry Smith } else { 167545b6f7e9SBarry Smith PetscInt *jj,k,i,j,n = ltog->n, bs = ltog->bs; 167645b6f7e9SBarry Smith const PetscInt *ii; 167745b6f7e9SBarry Smith 16789566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(bs*n,&jj)); 167945b6f7e9SBarry Smith *array = jj; 168045b6f7e9SBarry Smith k = 0; 168145b6f7e9SBarry Smith ii = ltog->indices; 168245b6f7e9SBarry Smith for (i=0; i<n; i++) 168345b6f7e9SBarry Smith for (j=0; j<bs; j++) 168445b6f7e9SBarry Smith jj[k++] = bs*ii[i] + j; 168545b6f7e9SBarry Smith } 168686994e45SJed Brown PetscFunctionReturn(0); 168786994e45SJed Brown } 168886994e45SJed Brown 168986994e45SJed Brown /*@C 1690193a2b41SJulian Andrej ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with ISLocalToGlobalMappingGetIndices() 169186994e45SJed Brown 169286994e45SJed Brown Not Collective 169386994e45SJed Brown 16944165533cSJose E. Roman Input Parameters: 169586994e45SJed Brown + ltog - local to global mapping 169686994e45SJed Brown - array - array of indices 169786994e45SJed Brown 169886994e45SJed Brown Level: advanced 169986994e45SJed Brown 170086994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices() 170186994e45SJed Brown @*/ 17027087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 170386994e45SJed Brown { 170486994e45SJed Brown PetscFunctionBegin; 170586994e45SJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 170686994e45SJed Brown PetscValidPointer(array,2); 17072c71b3e2SJacob Faibussowitsch PetscCheckFalse(ltog->bs == 1 && *array != ltog->indices,PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer"); 170845b6f7e9SBarry Smith 170945b6f7e9SBarry Smith if (ltog->bs > 1) { 17109566063dSJacob Faibussowitsch PetscCall(PetscFree(*(void**)array)); 171145b6f7e9SBarry Smith } 171245b6f7e9SBarry Smith PetscFunctionReturn(0); 171345b6f7e9SBarry Smith } 171445b6f7e9SBarry Smith 171545b6f7e9SBarry Smith /*@C 171645b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockIndices - Get global indices for every local block 171745b6f7e9SBarry Smith 171845b6f7e9SBarry Smith Not Collective 171945b6f7e9SBarry Smith 17204165533cSJose E. Roman Input Parameter: 172145b6f7e9SBarry Smith . ltog - local to global mapping 172245b6f7e9SBarry Smith 17234165533cSJose E. Roman Output Parameter: 172445b6f7e9SBarry Smith . array - array of indices 172545b6f7e9SBarry Smith 172645b6f7e9SBarry Smith Level: advanced 172745b6f7e9SBarry Smith 172845b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreBlockIndices() 172945b6f7e9SBarry Smith @*/ 173045b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 173145b6f7e9SBarry Smith { 173245b6f7e9SBarry Smith PetscFunctionBegin; 173345b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 173445b6f7e9SBarry Smith PetscValidPointer(array,2); 173545b6f7e9SBarry Smith *array = ltog->indices; 173645b6f7e9SBarry Smith PetscFunctionReturn(0); 173745b6f7e9SBarry Smith } 173845b6f7e9SBarry Smith 173945b6f7e9SBarry Smith /*@C 174045b6f7e9SBarry Smith ISLocalToGlobalMappingRestoreBlockIndices - Restore indices obtained with ISLocalToGlobalMappingGetBlockIndices() 174145b6f7e9SBarry Smith 174245b6f7e9SBarry Smith Not Collective 174345b6f7e9SBarry Smith 17444165533cSJose E. Roman Input Parameters: 174545b6f7e9SBarry Smith + ltog - local to global mapping 174645b6f7e9SBarry Smith - array - array of indices 174745b6f7e9SBarry Smith 174845b6f7e9SBarry Smith Level: advanced 174945b6f7e9SBarry Smith 175045b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices() 175145b6f7e9SBarry Smith @*/ 175245b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 175345b6f7e9SBarry Smith { 175445b6f7e9SBarry Smith PetscFunctionBegin; 175545b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 175645b6f7e9SBarry Smith PetscValidPointer(array,2); 1757*08401ef6SPierre Jolivet PetscCheck(*array == ltog->indices,PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer"); 17580298fd71SBarry Smith *array = NULL; 175986994e45SJed Brown PetscFunctionReturn(0); 176086994e45SJed Brown } 1761f7efa3c7SJed Brown 1762f7efa3c7SJed Brown /*@C 1763f7efa3c7SJed Brown ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings 1764f7efa3c7SJed Brown 1765f7efa3c7SJed Brown Not Collective 1766f7efa3c7SJed Brown 17674165533cSJose E. Roman Input Parameters: 1768f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate 1769f7efa3c7SJed Brown . n - number of mappings to concatenate 1770f7efa3c7SJed Brown - ltogs - local to global mappings 1771f7efa3c7SJed Brown 17724165533cSJose E. Roman Output Parameter: 1773f7efa3c7SJed Brown . ltogcat - new mapping 1774f7efa3c7SJed Brown 17759d90f715SBarry Smith Note: this currently always returns a mapping with block size of 1 17769d90f715SBarry Smith 17779d90f715SBarry Smith Developer Note: If all the input mapping have the same block size we could easily handle that as a special case 17789d90f715SBarry Smith 1779f7efa3c7SJed Brown Level: advanced 1780f7efa3c7SJed Brown 1781f7efa3c7SJed Brown .seealso: ISLocalToGlobalMappingCreate() 1782f7efa3c7SJed Brown @*/ 1783f7efa3c7SJed Brown PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm,PetscInt n,const ISLocalToGlobalMapping ltogs[],ISLocalToGlobalMapping *ltogcat) 1784f7efa3c7SJed Brown { 1785f7efa3c7SJed Brown PetscInt i,cnt,m,*idx; 1786f7efa3c7SJed Brown 1787f7efa3c7SJed Brown PetscFunctionBegin; 1788*08401ef6SPierre Jolivet PetscCheck(n >= 0,comm,PETSC_ERR_ARG_OUTOFRANGE,"Must have a non-negative number of mappings, given %" PetscInt_FMT,n); 1789f7efa3c7SJed Brown if (n > 0) PetscValidPointer(ltogs,3); 1790f7efa3c7SJed Brown for (i=0; i<n; i++) PetscValidHeaderSpecific(ltogs[i],IS_LTOGM_CLASSID,3); 1791f7efa3c7SJed Brown PetscValidPointer(ltogcat,4); 1792f7efa3c7SJed Brown for (cnt=0,i=0; i<n; i++) { 17939566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogs[i],&m)); 1794f7efa3c7SJed Brown cnt += m; 1795f7efa3c7SJed Brown } 17969566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(cnt,&idx)); 1797f7efa3c7SJed Brown for (cnt=0,i=0; i<n; i++) { 1798f7efa3c7SJed Brown const PetscInt *subidx; 17999566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogs[i],&m)); 18009566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx)); 18019566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&idx[cnt],subidx,m)); 18029566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx)); 1803f7efa3c7SJed Brown cnt += m; 1804f7efa3c7SJed Brown } 18059566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm,1,cnt,idx,PETSC_OWN_POINTER,ltogcat)); 1806f7efa3c7SJed Brown PetscFunctionReturn(0); 1807f7efa3c7SJed Brown } 180804a59952SBarry Smith 1809413f72f0SBarry Smith /*MC 1810413f72f0SBarry Smith ISLOCALTOGLOBALMAPPINGBASIC - basic implementation of the ISLocalToGlobalMapping object. When ISGlobalToLocalMappingApply() is 1811413f72f0SBarry Smith used this is good for only small and moderate size problems. 1812413f72f0SBarry Smith 1813413f72f0SBarry Smith Options Database Keys: 1814a2b725a8SWilliam Gropp . -islocaltoglobalmapping_type basic - select this method 1815413f72f0SBarry Smith 1816413f72f0SBarry Smith Level: beginner 1817413f72f0SBarry Smith 1818413f72f0SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingSetType(), ISLOCALTOGLOBALMAPPINGHASH 1819413f72f0SBarry Smith M*/ 1820413f72f0SBarry Smith PETSC_EXTERN PetscErrorCode ISLocalToGlobalMappingCreate_Basic(ISLocalToGlobalMapping ltog) 1821413f72f0SBarry Smith { 1822413f72f0SBarry Smith PetscFunctionBegin; 1823413f72f0SBarry Smith ltog->ops->globaltolocalmappingapply = ISGlobalToLocalMappingApply_Basic; 1824413f72f0SBarry Smith ltog->ops->globaltolocalmappingsetup = ISGlobalToLocalMappingSetUp_Basic; 1825413f72f0SBarry Smith ltog->ops->globaltolocalmappingapplyblock = ISGlobalToLocalMappingApplyBlock_Basic; 1826413f72f0SBarry Smith ltog->ops->destroy = ISLocalToGlobalMappingDestroy_Basic; 1827413f72f0SBarry Smith PetscFunctionReturn(0); 1828413f72f0SBarry Smith } 1829413f72f0SBarry Smith 1830413f72f0SBarry Smith /*MC 1831413f72f0SBarry Smith ISLOCALTOGLOBALMAPPINGHASH - hash implementation of the ISLocalToGlobalMapping object. When ISGlobalToLocalMappingApply() is 1832ed56e8eaSBarry Smith used this is good for large memory problems. 1833413f72f0SBarry Smith 1834413f72f0SBarry Smith Options Database Keys: 1835a2b725a8SWilliam Gropp . -islocaltoglobalmapping_type hash - select this method 1836413f72f0SBarry Smith 183795452b02SPatrick Sanan Notes: 183895452b02SPatrick Sanan This is selected automatically for large problems if the user does not set the type. 1839ed56e8eaSBarry Smith 1840413f72f0SBarry Smith Level: beginner 1841413f72f0SBarry Smith 1842413f72f0SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingSetType(), ISLOCALTOGLOBALMAPPINGHASH 1843413f72f0SBarry Smith M*/ 1844413f72f0SBarry Smith PETSC_EXTERN PetscErrorCode ISLocalToGlobalMappingCreate_Hash(ISLocalToGlobalMapping ltog) 1845413f72f0SBarry Smith { 1846413f72f0SBarry Smith PetscFunctionBegin; 1847413f72f0SBarry Smith ltog->ops->globaltolocalmappingapply = ISGlobalToLocalMappingApply_Hash; 1848413f72f0SBarry Smith ltog->ops->globaltolocalmappingsetup = ISGlobalToLocalMappingSetUp_Hash; 1849413f72f0SBarry Smith ltog->ops->globaltolocalmappingapplyblock = ISGlobalToLocalMappingApplyBlock_Hash; 1850413f72f0SBarry Smith ltog->ops->destroy = ISLocalToGlobalMappingDestroy_Hash; 1851413f72f0SBarry Smith PetscFunctionReturn(0); 1852413f72f0SBarry Smith } 1853413f72f0SBarry Smith 1854413f72f0SBarry Smith /*@C 1855413f72f0SBarry Smith ISLocalToGlobalMappingRegister - Adds a method for applying a global to local mapping with an ISLocalToGlobalMapping 1856413f72f0SBarry Smith 1857413f72f0SBarry Smith Not Collective 1858413f72f0SBarry Smith 1859413f72f0SBarry Smith Input Parameters: 1860413f72f0SBarry Smith + sname - name of a new method 1861413f72f0SBarry Smith - routine_create - routine to create method context 1862413f72f0SBarry Smith 1863413f72f0SBarry Smith Notes: 1864ed56e8eaSBarry Smith ISLocalToGlobalMappingRegister() may be called multiple times to add several user-defined mappings. 1865413f72f0SBarry Smith 1866413f72f0SBarry Smith Sample usage: 1867413f72f0SBarry Smith .vb 1868413f72f0SBarry Smith ISLocalToGlobalMappingRegister("my_mapper",MyCreate); 1869413f72f0SBarry Smith .ve 1870413f72f0SBarry Smith 1871ed56e8eaSBarry Smith Then, your mapping can be chosen with the procedural interface via 1872413f72f0SBarry Smith $ ISLocalToGlobalMappingSetType(ltog,"my_mapper") 1873413f72f0SBarry Smith or at runtime via the option 1874ed56e8eaSBarry Smith $ -islocaltoglobalmapping_type my_mapper 1875413f72f0SBarry Smith 1876413f72f0SBarry Smith Level: advanced 1877413f72f0SBarry Smith 1878413f72f0SBarry Smith .seealso: ISLocalToGlobalMappingRegisterAll(), ISLocalToGlobalMappingRegisterDestroy(), ISLOCALTOGLOBALMAPPINGBASIC, ISLOCALTOGLOBALMAPPINGHASH 1879413f72f0SBarry Smith 1880413f72f0SBarry Smith @*/ 1881413f72f0SBarry Smith PetscErrorCode ISLocalToGlobalMappingRegister(const char sname[],PetscErrorCode (*function)(ISLocalToGlobalMapping)) 1882413f72f0SBarry Smith { 1883413f72f0SBarry Smith PetscFunctionBegin; 18849566063dSJacob Faibussowitsch PetscCall(ISInitializePackage()); 18859566063dSJacob Faibussowitsch PetscCall(PetscFunctionListAdd(&ISLocalToGlobalMappingList,sname,function)); 1886413f72f0SBarry Smith PetscFunctionReturn(0); 1887413f72f0SBarry Smith } 1888413f72f0SBarry Smith 1889413f72f0SBarry Smith /*@C 1890ed56e8eaSBarry Smith ISLocalToGlobalMappingSetType - Builds ISLocalToGlobalMapping for a particular global to local mapping approach. 1891413f72f0SBarry Smith 1892413f72f0SBarry Smith Logically Collective on ISLocalToGlobalMapping 1893413f72f0SBarry Smith 1894413f72f0SBarry Smith Input Parameters: 1895413f72f0SBarry Smith + ltog - the ISLocalToGlobalMapping object 1896413f72f0SBarry Smith - type - a known method 1897413f72f0SBarry Smith 1898413f72f0SBarry Smith Options Database Key: 1899ed56e8eaSBarry Smith . -islocaltoglobalmapping_type <method> - Sets the method; use -help for a list 1900413f72f0SBarry Smith of available methods (for instance, basic or hash) 1901413f72f0SBarry Smith 1902413f72f0SBarry Smith Notes: 1903413f72f0SBarry Smith See "petsc/include/petscis.h" for available methods 1904413f72f0SBarry Smith 1905413f72f0SBarry Smith Normally, it is best to use the ISLocalToGlobalMappingSetFromOptions() command and 1906413f72f0SBarry Smith then set the ISLocalToGlobalMapping type from the options database rather than by using 1907413f72f0SBarry Smith this routine. 1908413f72f0SBarry Smith 1909413f72f0SBarry Smith Level: intermediate 1910413f72f0SBarry Smith 1911413f72f0SBarry Smith Developer Note: ISLocalToGlobalMappingRegister() is used to add new types to ISLocalToGlobalMappingList from which they 1912413f72f0SBarry Smith are accessed by ISLocalToGlobalMappingSetType(). 1913413f72f0SBarry Smith 1914a0d79125SStefano Zampini .seealso: ISLocalToGlobalMappingType, ISLocalToGlobalMappingRegister(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingGetType() 1915413f72f0SBarry Smith @*/ 1916413f72f0SBarry Smith PetscErrorCode ISLocalToGlobalMappingSetType(ISLocalToGlobalMapping ltog, ISLocalToGlobalMappingType type) 1917413f72f0SBarry Smith { 1918413f72f0SBarry Smith PetscBool match; 19195f80ce2aSJacob Faibussowitsch PetscErrorCode (*r)(ISLocalToGlobalMapping) = NULL; 1920413f72f0SBarry Smith 1921413f72f0SBarry Smith PetscFunctionBegin; 1922413f72f0SBarry Smith PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 1923a0d79125SStefano Zampini if (type) PetscValidCharPointer(type,2); 1924413f72f0SBarry Smith 19259566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)ltog,type,&match)); 1926413f72f0SBarry Smith if (match) PetscFunctionReturn(0); 1927413f72f0SBarry Smith 1928a0d79125SStefano Zampini /* L2G maps defer type setup at globaltolocal calls, allow passing NULL here */ 1929a0d79125SStefano Zampini if (type) { 19309566063dSJacob Faibussowitsch PetscCall(PetscFunctionListFind(ISLocalToGlobalMappingList,type,&r)); 1931a0d79125SStefano Zampini PetscCheck(r,PetscObjectComm((PetscObject)ltog),PETSC_ERR_ARG_UNKNOWN_TYPE,"Unable to find requested ISLocalToGlobalMapping type %s",type); 1932a0d79125SStefano Zampini } 1933413f72f0SBarry Smith /* Destroy the previous private LTOG context */ 1934413f72f0SBarry Smith if (ltog->ops->destroy) { 19359566063dSJacob Faibussowitsch PetscCall((*ltog->ops->destroy)(ltog)); 1936413f72f0SBarry Smith ltog->ops->destroy = NULL; 1937413f72f0SBarry Smith } 19389566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)ltog,type)); 19399566063dSJacob Faibussowitsch if (r) PetscCall((*r)(ltog)); 1940a0d79125SStefano Zampini PetscFunctionReturn(0); 1941a0d79125SStefano Zampini } 1942a0d79125SStefano Zampini 1943a0d79125SStefano Zampini /*@C 1944a0d79125SStefano Zampini ISLocalToGlobalMappingGetType - Get the type of the l2g map 1945a0d79125SStefano Zampini 1946a0d79125SStefano Zampini Not Collective 1947a0d79125SStefano Zampini 1948a0d79125SStefano Zampini Input Parameter: 1949a0d79125SStefano Zampini . ltog - the ISLocalToGlobalMapping object 1950a0d79125SStefano Zampini 1951a0d79125SStefano Zampini Output Parameter: 1952a0d79125SStefano Zampini . type - the type 1953a0d79125SStefano Zampini 195449762cbcSSatish Balay Level: intermediate 195549762cbcSSatish Balay 1956a0d79125SStefano Zampini .seealso: ISLocalToGlobalMappingType, ISLocalToGlobalMappingRegister(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingSetType() 1957a0d79125SStefano Zampini @*/ 1958a0d79125SStefano Zampini PetscErrorCode ISLocalToGlobalMappingGetType(ISLocalToGlobalMapping ltog, ISLocalToGlobalMappingType *type) 1959a0d79125SStefano Zampini { 1960a0d79125SStefano Zampini PetscFunctionBegin; 1961a0d79125SStefano Zampini PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 1962a0d79125SStefano Zampini PetscValidPointer(type,2); 1963a0d79125SStefano Zampini *type = ((PetscObject)ltog)->type_name; 1964413f72f0SBarry Smith PetscFunctionReturn(0); 1965413f72f0SBarry Smith } 1966413f72f0SBarry Smith 1967413f72f0SBarry Smith PetscBool ISLocalToGlobalMappingRegisterAllCalled = PETSC_FALSE; 1968413f72f0SBarry Smith 1969413f72f0SBarry Smith /*@C 1970413f72f0SBarry Smith ISLocalToGlobalMappingRegisterAll - Registers all of the local to global mapping components in the IS package. 1971413f72f0SBarry Smith 1972413f72f0SBarry Smith Not Collective 1973413f72f0SBarry Smith 1974413f72f0SBarry Smith Level: advanced 1975413f72f0SBarry Smith 1976413f72f0SBarry Smith .seealso: ISRegister(), ISLocalToGlobalRegister() 1977413f72f0SBarry Smith @*/ 1978413f72f0SBarry Smith PetscErrorCode ISLocalToGlobalMappingRegisterAll(void) 1979413f72f0SBarry Smith { 1980413f72f0SBarry Smith PetscFunctionBegin; 1981413f72f0SBarry Smith if (ISLocalToGlobalMappingRegisterAllCalled) PetscFunctionReturn(0); 1982413f72f0SBarry Smith ISLocalToGlobalMappingRegisterAllCalled = PETSC_TRUE; 19839566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegister(ISLOCALTOGLOBALMAPPINGBASIC, ISLocalToGlobalMappingCreate_Basic)); 19849566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegister(ISLOCALTOGLOBALMAPPINGHASH, ISLocalToGlobalMappingCreate_Hash)); 1985413f72f0SBarry Smith PetscFunctionReturn(0); 1986413f72f0SBarry Smith } 1987