12362add9SBarry Smith 2b45d2f2cSJed Brown #include <petsc-private/isimpl.h> /*I "petscis.h" I*/ 30c312b8eSJed Brown #include <petscsf.h> 4665c2dedSJed Brown #include <petscviewer.h> 52362add9SBarry Smith 67087cfbeSBarry Smith PetscClassId IS_LTOGM_CLASSID; 78e58c17dSMatthew Knepley 804a59952SBarry Smith 94a2ae208SSatish Balay #undef __FUNCT__ 10743c9b42SStefano Zampini #define __FUNCT__ "ISG2LMapApply" 11186d4ecdSBarry Smith PetscErrorCode ISG2LMapApply(ISLocalToGlobalMapping mapping,PetscInt n,const PetscInt in[],PetscInt out[]) 12186d4ecdSBarry Smith { 13186d4ecdSBarry Smith PetscErrorCode ierr; 14743c9b42SStefano Zampini PetscInt i,start,end; 15186d4ecdSBarry Smith 16186d4ecdSBarry Smith PetscFunctionBegin; 17186d4ecdSBarry Smith if (!mapping->globals) { 18186d4ecdSBarry Smith ierr = ISGlobalToLocalMappingApply(mapping,IS_GTOLM_MASK,0,0,0,0);CHKERRQ(ierr); 19186d4ecdSBarry Smith } 20743c9b42SStefano Zampini start = mapping->globalstart; 21743c9b42SStefano Zampini end = mapping->globalend; 22186d4ecdSBarry Smith for (i=0; i<n; i++) { 23186d4ecdSBarry Smith if (in[i] < 0) out[i] = in[i]; 24186d4ecdSBarry Smith else if (in[i] < start) out[i] = -1; 25186d4ecdSBarry Smith else if (in[i] > end) out[i] = -1; 26743c9b42SStefano Zampini else out[i] = mapping->globals[in[i] - start]; 27186d4ecdSBarry Smith } 28186d4ecdSBarry Smith PetscFunctionReturn(0); 29186d4ecdSBarry Smith } 30186d4ecdSBarry Smith 31186d4ecdSBarry Smith 32186d4ecdSBarry Smith #undef __FUNCT__ 334a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetSize" 34565245c5SBarry Smith /*@ 35107e9a97SBarry Smith ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping 363b9aefa3SBarry Smith 373b9aefa3SBarry Smith Not Collective 383b9aefa3SBarry Smith 393b9aefa3SBarry Smith Input Parameter: 403b9aefa3SBarry Smith . ltog - local to global mapping 413b9aefa3SBarry Smith 423b9aefa3SBarry Smith Output Parameter: 43107e9a97SBarry Smith . n - the number of entries in the local mapping, ISLocalToGlobalMappingGetIndices() returns an array of this length 443b9aefa3SBarry Smith 453b9aefa3SBarry Smith Level: advanced 463b9aefa3SBarry Smith 47273d9f13SBarry Smith Concepts: mapping^local to global 483b9aefa3SBarry Smith 493b9aefa3SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 503b9aefa3SBarry Smith @*/ 517087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping,PetscInt *n) 523b9aefa3SBarry Smith { 533b9aefa3SBarry Smith PetscFunctionBegin; 540700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 554482741eSBarry Smith PetscValidIntPointer(n,2); 56107e9a97SBarry Smith *n = mapping->bs*mapping->n; 573b9aefa3SBarry Smith PetscFunctionReturn(0); 583b9aefa3SBarry Smith } 593b9aefa3SBarry Smith 604a2ae208SSatish Balay #undef __FUNCT__ 614a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingView" 625a5d4f66SBarry Smith /*@C 635a5d4f66SBarry Smith ISLocalToGlobalMappingView - View a local to global mapping 645a5d4f66SBarry Smith 65b9cd556bSLois Curfman McInnes Not Collective 66b9cd556bSLois Curfman McInnes 675a5d4f66SBarry Smith Input Parameters: 683b9aefa3SBarry Smith + ltog - local to global mapping 693b9aefa3SBarry Smith - viewer - viewer 705a5d4f66SBarry Smith 71a997ad1aSLois Curfman McInnes Level: advanced 72a997ad1aSLois Curfman McInnes 73273d9f13SBarry Smith Concepts: mapping^local to global 745a5d4f66SBarry Smith 755a5d4f66SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 765a5d4f66SBarry Smith @*/ 777087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping,PetscViewer viewer) 785a5d4f66SBarry Smith { 7932dcc486SBarry Smith PetscInt i; 8032dcc486SBarry Smith PetscMPIInt rank; 81ace3abfcSBarry Smith PetscBool iascii; 826849ba73SBarry Smith PetscErrorCode ierr; 835a5d4f66SBarry Smith 845a5d4f66SBarry Smith PetscFunctionBegin; 850700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 863050cee2SBarry Smith if (!viewer) { 87ce94432eSBarry Smith ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)mapping),&viewer);CHKERRQ(ierr); 883050cee2SBarry Smith } 890700a824SBarry Smith PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2); 905a5d4f66SBarry Smith 91ce94432eSBarry Smith ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mapping),&rank);CHKERRQ(ierr); 92251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 9332077d6dSBarry Smith if (iascii) { 9498c3331eSBarry Smith ierr = PetscObjectPrintClassNamePrefixType((PetscObject)mapping,viewer);CHKERRQ(ierr); 957b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr); 965a5d4f66SBarry Smith for (i=0; i<mapping->n; i++) { 977904a332SBarry Smith ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %D %D\n",rank,i,mapping->indices[i]);CHKERRQ(ierr); 986831982aSBarry Smith } 99b0a32e0cSBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1007b23a99aSBarry Smith ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr); 1017b23a99aSBarry Smith } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Viewer type %s not supported for ISLocalToGlobalMapping",((PetscObject)viewer)->type_name); 1025a5d4f66SBarry Smith PetscFunctionReturn(0); 1035a5d4f66SBarry Smith } 1045a5d4f66SBarry Smith 1054a2ae208SSatish Balay #undef __FUNCT__ 1064a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreateIS" 1071f428162SBarry Smith /*@ 1082bdab257SBarry Smith ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n) 1092bdab257SBarry Smith ordering and a global parallel ordering. 1102bdab257SBarry Smith 1110f5bd95cSBarry Smith Not collective 112b9cd556bSLois Curfman McInnes 113a997ad1aSLois Curfman McInnes Input Parameter: 1148c03b21aSDmitry Karpeev . is - index set containing the global numbers for each local number 1152bdab257SBarry Smith 116a997ad1aSLois Curfman McInnes Output Parameter: 1172bdab257SBarry Smith . mapping - new mapping data structure 1182bdab257SBarry Smith 119f0413b6fSBarry Smith Notes: the block size of the IS determines the block size of the mapping 120a997ad1aSLois Curfman McInnes Level: advanced 121a997ad1aSLois Curfman McInnes 122273d9f13SBarry Smith Concepts: mapping^local to global 1232bdab257SBarry Smith 1242bdab257SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate() 1252bdab257SBarry Smith @*/ 1267087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingCreateIS(IS is,ISLocalToGlobalMapping *mapping) 1272bdab257SBarry Smith { 1286849ba73SBarry Smith PetscErrorCode ierr; 1293bbf0e92SBarry Smith PetscInt n,bs; 1305d0c19d7SBarry Smith const PetscInt *indices; 1312bdab257SBarry Smith MPI_Comm comm; 1323bbf0e92SBarry Smith PetscBool isblock; 1333a40ed3dSBarry Smith 1343a40ed3dSBarry Smith PetscFunctionBegin; 1350700a824SBarry Smith PetscValidHeaderSpecific(is,IS_CLASSID,1); 1364482741eSBarry Smith PetscValidPointer(mapping,2); 1372bdab257SBarry Smith 1382bdab257SBarry Smith ierr = PetscObjectGetComm((PetscObject)is,&comm);CHKERRQ(ierr); 1393b9aefa3SBarry Smith ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr); 1403bbf0e92SBarry Smith ierr = PetscObjectTypeCompare((PetscObject)is,ISBLOCK,&isblock);CHKERRQ(ierr); 1416006e8d2SBarry Smith if (!isblock) { 142f0413b6fSBarry Smith ierr = ISGetIndices(is,&indices);CHKERRQ(ierr); 143f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(comm,1,n,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr); 1442bdab257SBarry Smith ierr = ISRestoreIndices(is,&indices);CHKERRQ(ierr); 1456006e8d2SBarry Smith } else { 1466006e8d2SBarry Smith ierr = ISGetBlockSize(is,&bs);CHKERRQ(ierr); 147f0413b6fSBarry Smith ierr = ISBlockGetIndices(is,&indices);CHKERRQ(ierr); 14828bc9809SBarry Smith ierr = ISLocalToGlobalMappingCreate(comm,bs,n/bs,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr); 149f0413b6fSBarry Smith ierr = ISBlockRestoreIndices(is,&indices);CHKERRQ(ierr); 1506006e8d2SBarry Smith } 1513a40ed3dSBarry Smith PetscFunctionReturn(0); 1522bdab257SBarry Smith } 1535a5d4f66SBarry Smith 154a4d96a55SJed Brown #undef __FUNCT__ 155a4d96a55SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingCreateSF" 156a4d96a55SJed Brown /*@C 157a4d96a55SJed Brown ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n) 158a4d96a55SJed Brown ordering and a global parallel ordering. 159a4d96a55SJed Brown 160a4d96a55SJed Brown Collective 161a4d96a55SJed Brown 162a4d96a55SJed Brown Input Parameter: 163a4d96a55SJed Brown + sf - star forest mapping contiguous local indices to (rank, offset) 164a4d96a55SJed Brown - start - first global index on this process 165a4d96a55SJed Brown 166a4d96a55SJed Brown Output Parameter: 167a4d96a55SJed Brown . mapping - new mapping data structure 168a4d96a55SJed Brown 169a4d96a55SJed Brown Level: advanced 170a4d96a55SJed Brown 171a4d96a55SJed Brown Concepts: mapping^local to global 172a4d96a55SJed Brown 173a4d96a55SJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS() 174a4d96a55SJed Brown @*/ 175a4d96a55SJed Brown PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf,PetscInt start,ISLocalToGlobalMapping *mapping) 176a4d96a55SJed Brown { 177a4d96a55SJed Brown PetscErrorCode ierr; 178a4d96a55SJed Brown PetscInt i,maxlocal,nroots,nleaves,*globals,*ltog; 179a4d96a55SJed Brown const PetscInt *ilocal; 180a4d96a55SJed Brown MPI_Comm comm; 181a4d96a55SJed Brown 182a4d96a55SJed Brown PetscFunctionBegin; 183a4d96a55SJed Brown PetscValidHeaderSpecific(sf,PETSCSF_CLASSID,1); 184a4d96a55SJed Brown PetscValidPointer(mapping,3); 185a4d96a55SJed Brown 186a4d96a55SJed Brown ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr); 1870298fd71SBarry Smith ierr = PetscSFGetGraph(sf,&nroots,&nleaves,&ilocal,NULL);CHKERRQ(ierr); 188f6e5521dSKarl Rupp if (ilocal) { 189f6e5521dSKarl Rupp for (i=0,maxlocal=0; i<nleaves; i++) maxlocal = PetscMax(maxlocal,ilocal[i]+1); 190f6e5521dSKarl Rupp } 191a4d96a55SJed Brown else maxlocal = nleaves; 192785e854fSJed Brown ierr = PetscMalloc1(nroots,&globals);CHKERRQ(ierr); 193785e854fSJed Brown ierr = PetscMalloc1(maxlocal,<og);CHKERRQ(ierr); 194a4d96a55SJed Brown for (i=0; i<nroots; i++) globals[i] = start + i; 195a4d96a55SJed Brown for (i=0; i<maxlocal; i++) ltog[i] = -1; 196a4d96a55SJed Brown ierr = PetscSFBcastBegin(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr); 197a4d96a55SJed Brown ierr = PetscSFBcastEnd(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr); 198f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(comm,1,maxlocal,ltog,PETSC_OWN_POINTER,mapping);CHKERRQ(ierr); 199a4d96a55SJed Brown ierr = PetscFree(globals);CHKERRQ(ierr); 200a4d96a55SJed Brown PetscFunctionReturn(0); 201a4d96a55SJed Brown } 202b46b645bSBarry Smith 2034a2ae208SSatish Balay #undef __FUNCT__ 20445b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetBlockSize" 20545b6f7e9SBarry Smith /*@ 20645b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockSize - Gets the blocksize of the mapping 20745b6f7e9SBarry Smith ordering and a global parallel ordering. 20845b6f7e9SBarry Smith 20945b6f7e9SBarry Smith Not Collective 21045b6f7e9SBarry Smith 21145b6f7e9SBarry Smith Input Parameters: 21245b6f7e9SBarry Smith . mapping - mapping data structure 21345b6f7e9SBarry Smith 21445b6f7e9SBarry Smith Output Parameter: 21545b6f7e9SBarry Smith . bs - the blocksize 21645b6f7e9SBarry Smith 21745b6f7e9SBarry Smith Level: advanced 21845b6f7e9SBarry Smith 21945b6f7e9SBarry Smith Concepts: mapping^local to global 22045b6f7e9SBarry Smith 22145b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS() 22245b6f7e9SBarry Smith @*/ 22345b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockSize(ISLocalToGlobalMapping mapping,PetscInt *bs) 22445b6f7e9SBarry Smith { 22545b6f7e9SBarry Smith PetscFunctionBegin; 226*cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 22745b6f7e9SBarry Smith *bs = mapping->bs; 22845b6f7e9SBarry Smith PetscFunctionReturn(0); 22945b6f7e9SBarry Smith } 23045b6f7e9SBarry Smith 23145b6f7e9SBarry Smith #undef __FUNCT__ 2324a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreate" 233ba5bb76aSSatish Balay /*@ 23490f02eecSBarry Smith ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n) 23590f02eecSBarry Smith ordering and a global parallel ordering. 2362362add9SBarry Smith 23789d82c54SBarry Smith Not Collective, but communicator may have more than one process 238b9cd556bSLois Curfman McInnes 2392362add9SBarry Smith Input Parameters: 24089d82c54SBarry Smith + comm - MPI communicator 241f0413b6fSBarry Smith . bs - the block size 24228bc9809SBarry Smith . n - the number of local elements divided by the block size, or equivalently the number of block indices 24328bc9809SBarry Smith . indices - the global index for each local element, these do not need to be in increasing order (sorted), these values should not be scaled (i.e. multiplied) by the blocksize bs 244d5ad8652SBarry Smith - mode - see PetscCopyMode 2452362add9SBarry Smith 246a997ad1aSLois Curfman McInnes Output Parameter: 24790f02eecSBarry Smith . mapping - new mapping data structure 2482362add9SBarry Smith 249f0413b6fSBarry Smith Notes: There is one integer value in indices per block and it represents the actual indices bs*idx + j, where j=0,..,bs-1 250a997ad1aSLois Curfman McInnes Level: advanced 251a997ad1aSLois Curfman McInnes 252273d9f13SBarry Smith Concepts: mapping^local to global 2532362add9SBarry Smith 254d5ad8652SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS() 2552362add9SBarry Smith @*/ 256f0413b6fSBarry Smith PetscErrorCode ISLocalToGlobalMappingCreate(MPI_Comm cm,PetscInt bs,PetscInt n,const PetscInt indices[],PetscCopyMode mode,ISLocalToGlobalMapping *mapping) 2572362add9SBarry Smith { 2586849ba73SBarry Smith PetscErrorCode ierr; 25932dcc486SBarry Smith PetscInt *in; 260b46b645bSBarry Smith 261b46b645bSBarry Smith PetscFunctionBegin; 26273911063SBarry Smith if (n) PetscValidIntPointer(indices,3); 2634482741eSBarry Smith PetscValidPointer(mapping,4); 264b46b645bSBarry Smith 2650298fd71SBarry Smith *mapping = NULL; 266607a6623SBarry Smith ierr = ISInitializePackage();CHKERRQ(ierr); 2672362add9SBarry Smith 26867c2884eSBarry Smith ierr = PetscHeaderCreate(*mapping,_p_ISLocalToGlobalMapping,int,IS_LTOGM_CLASSID,"ISLocalToGlobalMapping","Local to global mapping","IS", 26952e6d16bSBarry Smith cm,ISLocalToGlobalMappingDestroy,ISLocalToGlobalMappingView);CHKERRQ(ierr); 270d4bb536fSBarry Smith (*mapping)->n = n; 271f0413b6fSBarry Smith (*mapping)->bs = bs; 272d4bb536fSBarry Smith /* 273d4bb536fSBarry Smith Do not create the global to local mapping. This is only created if 274d4bb536fSBarry Smith ISGlobalToLocalMapping() is called 275d4bb536fSBarry Smith */ 276d4bb536fSBarry Smith (*mapping)->globals = 0; 277d5ad8652SBarry Smith if (mode == PETSC_COPY_VALUES) { 278785e854fSJed Brown ierr = PetscMalloc1(n,&in);CHKERRQ(ierr); 279d5ad8652SBarry Smith ierr = PetscMemcpy(in,indices,n*sizeof(PetscInt));CHKERRQ(ierr); 280d5ad8652SBarry Smith (*mapping)->indices = in; 2816389a1a1SBarry Smith ierr = PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt));CHKERRQ(ierr); 2826389a1a1SBarry Smith } else if (mode == PETSC_OWN_POINTER) { 2836389a1a1SBarry Smith (*mapping)->indices = (PetscInt*)indices; 2846389a1a1SBarry Smith ierr = PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt));CHKERRQ(ierr); 2856389a1a1SBarry Smith } 286f6e5521dSKarl Rupp else SETERRQ(cm,PETSC_ERR_SUP,"Cannot currently use PETSC_USE_POINTER"); 2873a40ed3dSBarry Smith PetscFunctionReturn(0); 2882362add9SBarry Smith } 2892362add9SBarry Smith 2904a2ae208SSatish Balay #undef __FUNCT__ 2914a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingDestroy" 29290f02eecSBarry Smith /*@ 29390f02eecSBarry Smith ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n) 29490f02eecSBarry Smith ordering and a global parallel ordering. 29590f02eecSBarry Smith 2960f5bd95cSBarry Smith Note Collective 297b9cd556bSLois Curfman McInnes 29890f02eecSBarry Smith Input Parameters: 29990f02eecSBarry Smith . mapping - mapping data structure 30090f02eecSBarry Smith 301a997ad1aSLois Curfman McInnes Level: advanced 302a997ad1aSLois Curfman McInnes 3033acfe500SLois Curfman McInnes .seealso: ISLocalToGlobalMappingCreate() 30490f02eecSBarry Smith @*/ 3056bf464f9SBarry Smith PetscErrorCode ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping) 30690f02eecSBarry Smith { 307dfbe8321SBarry Smith PetscErrorCode ierr; 3085fd66863SKarl Rupp 3093a40ed3dSBarry Smith PetscFunctionBegin; 3106bf464f9SBarry Smith if (!*mapping) PetscFunctionReturn(0); 3116bf464f9SBarry Smith PetscValidHeaderSpecific((*mapping),IS_LTOGM_CLASSID,1); 312997056adSBarry Smith if (--((PetscObject)(*mapping))->refct > 0) {*mapping = 0;PetscFunctionReturn(0);} 3136bf464f9SBarry Smith ierr = PetscFree((*mapping)->indices);CHKERRQ(ierr); 3146bf464f9SBarry Smith ierr = PetscFree((*mapping)->globals);CHKERRQ(ierr); 315d38fa0fbSBarry Smith ierr = PetscHeaderDestroy(mapping);CHKERRQ(ierr); 316992144d0SBarry Smith *mapping = 0; 3173a40ed3dSBarry Smith PetscFunctionReturn(0); 31890f02eecSBarry Smith } 31990f02eecSBarry Smith 3204a2ae208SSatish Balay #undef __FUNCT__ 3214a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingApplyIS" 32290f02eecSBarry Smith /*@ 3233acfe500SLois Curfman McInnes ISLocalToGlobalMappingApplyIS - Creates from an IS in the local numbering 3243acfe500SLois Curfman McInnes a new index set using the global numbering defined in an ISLocalToGlobalMapping 3253acfe500SLois Curfman McInnes context. 32690f02eecSBarry Smith 327b9cd556bSLois Curfman McInnes Not collective 328b9cd556bSLois Curfman McInnes 32990f02eecSBarry Smith Input Parameters: 330b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 331b9cd556bSLois Curfman McInnes - is - index set in local numbering 33290f02eecSBarry Smith 33390f02eecSBarry Smith Output Parameters: 33490f02eecSBarry Smith . newis - index set in global numbering 33590f02eecSBarry Smith 336a997ad1aSLois Curfman McInnes Level: advanced 337a997ad1aSLois Curfman McInnes 338273d9f13SBarry Smith Concepts: mapping^local to global 3393acfe500SLois Curfman McInnes 34090f02eecSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(), 341d4bb536fSBarry Smith ISLocalToGlobalMappingDestroy(), ISGlobalToLocalMappingApply() 34290f02eecSBarry Smith @*/ 3437087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping,IS is,IS *newis) 34490f02eecSBarry Smith { 3456849ba73SBarry Smith PetscErrorCode ierr; 346e24637baSBarry Smith PetscInt n,*idxout; 3475d0c19d7SBarry Smith const PetscInt *idxin; 3483a40ed3dSBarry Smith 3493a40ed3dSBarry Smith PetscFunctionBegin; 3500700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 3510700a824SBarry Smith PetscValidHeaderSpecific(is,IS_CLASSID,2); 3524482741eSBarry Smith PetscValidPointer(newis,3); 35390f02eecSBarry Smith 3543b9aefa3SBarry Smith ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr); 35590f02eecSBarry Smith ierr = ISGetIndices(is,&idxin);CHKERRQ(ierr); 356785e854fSJed Brown ierr = PetscMalloc1(n,&idxout);CHKERRQ(ierr); 357e24637baSBarry Smith ierr = ISLocalToGlobalMappingApply(mapping,n,idxin,idxout);CHKERRQ(ierr); 3583b9aefa3SBarry Smith ierr = ISRestoreIndices(is,&idxin);CHKERRQ(ierr); 359543f3098SMatthew G. Knepley ierr = ISCreateGeneral(PetscObjectComm((PetscObject)is),n,idxout,PETSC_OWN_POINTER,newis);CHKERRQ(ierr); 3603a40ed3dSBarry Smith PetscFunctionReturn(0); 36190f02eecSBarry Smith } 36290f02eecSBarry Smith 363afcb2eb5SJed Brown #undef __FUNCT__ 364afcb2eb5SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingApply" 365b89cb25eSSatish Balay /*@ 3663acfe500SLois Curfman McInnes ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering 3673acfe500SLois Curfman McInnes and converts them to the global numbering. 36890f02eecSBarry Smith 369b9cd556bSLois Curfman McInnes Not collective 370b9cd556bSLois Curfman McInnes 371bb25748dSBarry Smith Input Parameters: 372b9cd556bSLois Curfman McInnes + mapping - the local to global mapping context 373bb25748dSBarry Smith . N - number of integers 374b9cd556bSLois Curfman McInnes - in - input indices in local numbering 375bb25748dSBarry Smith 376bb25748dSBarry Smith Output Parameter: 377bb25748dSBarry Smith . out - indices in global numbering 378bb25748dSBarry Smith 379b9cd556bSLois Curfman McInnes Notes: 380b9cd556bSLois Curfman McInnes The in and out array parameters may be identical. 381d4bb536fSBarry Smith 382a997ad1aSLois Curfman McInnes Level: advanced 383a997ad1aSLois Curfman McInnes 38445b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApplyBlock(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(), 3850752156aSBarry Smith ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(), 386d4bb536fSBarry Smith AOPetscToApplication(), ISGlobalToLocalMappingApply() 387bb25748dSBarry Smith 388273d9f13SBarry Smith Concepts: mapping^local to global 389afcb2eb5SJed Brown @*/ 390afcb2eb5SJed Brown PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[]) 391afcb2eb5SJed Brown { 392*cbc1caf0SMatthew G. Knepley PetscInt i,bs,Nmax; 39345b6f7e9SBarry Smith 39445b6f7e9SBarry Smith PetscFunctionBegin; 395*cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 396*cbc1caf0SMatthew G. Knepley bs = mapping->bs; 397*cbc1caf0SMatthew G. Knepley Nmax = bs*mapping->n; 39845b6f7e9SBarry Smith if (bs == 1) { 399*cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 40045b6f7e9SBarry Smith for (i=0; i<N; i++) { 40145b6f7e9SBarry Smith if (in[i] < 0) { 40245b6f7e9SBarry Smith out[i] = in[i]; 40345b6f7e9SBarry Smith continue; 40445b6f7e9SBarry Smith } 405e24637baSBarry Smith if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %D too large %D (max) at %D",in[i],Nmax-1,i); 40645b6f7e9SBarry Smith out[i] = idx[in[i]]; 40745b6f7e9SBarry Smith } 40845b6f7e9SBarry Smith } else { 409*cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 41045b6f7e9SBarry Smith for (i=0; i<N; i++) { 41145b6f7e9SBarry Smith if (in[i] < 0) { 41245b6f7e9SBarry Smith out[i] = in[i]; 41345b6f7e9SBarry Smith continue; 41445b6f7e9SBarry Smith } 415e24637baSBarry Smith if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %D too large %D (max) at %D",in[i],Nmax-1,i); 41645b6f7e9SBarry Smith out[i] = idx[in[i]/bs]*bs + (in[i] % bs); 41745b6f7e9SBarry Smith } 41845b6f7e9SBarry Smith } 41945b6f7e9SBarry Smith PetscFunctionReturn(0); 42045b6f7e9SBarry Smith } 42145b6f7e9SBarry Smith 42245b6f7e9SBarry Smith #undef __FUNCT__ 42345b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingApplyBlock" 42445b6f7e9SBarry Smith /*@ 4256006e8d2SBarry Smith ISLocalToGlobalMappingApplyBlock - Takes a list of integers in a local block numbering and converts them to the global block numbering 42645b6f7e9SBarry Smith 42745b6f7e9SBarry Smith Not collective 42845b6f7e9SBarry Smith 42945b6f7e9SBarry Smith Input Parameters: 43045b6f7e9SBarry Smith + mapping - the local to global mapping context 43145b6f7e9SBarry Smith . N - number of integers 4326006e8d2SBarry Smith - in - input indices in local block numbering 43345b6f7e9SBarry Smith 43445b6f7e9SBarry Smith Output Parameter: 4356006e8d2SBarry Smith . out - indices in global block numbering 43645b6f7e9SBarry Smith 43745b6f7e9SBarry Smith Notes: 43845b6f7e9SBarry Smith The in and out array parameters may be identical. 43945b6f7e9SBarry Smith 4406006e8d2SBarry Smith Example: 4416006e8d2SBarry Smith If the index values are {0,1,6,7} set with a call to ISLocalToGlobalMappingCreate(PETSC_COMM_SELF,2,2,{0,3}) then the mapping applied to 0 4426006e8d2SBarry Smith (the first block) would produce 0 and the mapping applied to 1 (the second block) would produce 3. 4436006e8d2SBarry Smith 44445b6f7e9SBarry Smith Level: advanced 44545b6f7e9SBarry Smith 44645b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(), 44745b6f7e9SBarry Smith ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(), 44845b6f7e9SBarry Smith AOPetscToApplication(), ISGlobalToLocalMappingApply() 44945b6f7e9SBarry Smith 45045b6f7e9SBarry Smith Concepts: mapping^local to global 45145b6f7e9SBarry Smith @*/ 45245b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingApplyBlock(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[]) 45345b6f7e9SBarry Smith { 454*cbc1caf0SMatthew G. Knepley 455*cbc1caf0SMatthew G. Knepley PetscFunctionBegin; 456*cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 457*cbc1caf0SMatthew G. Knepley { 458afcb2eb5SJed Brown PetscInt i,Nmax = mapping->n; 459afcb2eb5SJed Brown const PetscInt *idx = mapping->indices; 460d4bb536fSBarry Smith 461afcb2eb5SJed Brown for (i=0; i<N; i++) { 462afcb2eb5SJed Brown if (in[i] < 0) { 463afcb2eb5SJed Brown out[i] = in[i]; 464afcb2eb5SJed Brown continue; 465afcb2eb5SJed Brown } 466e24637baSBarry Smith if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local block index %D too large %D (max) at %D",in[i],Nmax-1,i); 467afcb2eb5SJed Brown out[i] = idx[in[i]]; 468afcb2eb5SJed Brown } 469*cbc1caf0SMatthew G. Knepley } 470afcb2eb5SJed Brown PetscFunctionReturn(0); 471afcb2eb5SJed Brown } 472d4bb536fSBarry Smith 473d4bb536fSBarry Smith /* -----------------------------------------------------------------------------------------*/ 474d4bb536fSBarry Smith 4754a2ae208SSatish Balay #undef __FUNCT__ 4764a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingSetUp_Private" 477d4bb536fSBarry Smith /* 478d4bb536fSBarry Smith Creates the global fields in the ISLocalToGlobalMapping structure 479d4bb536fSBarry Smith */ 4806849ba73SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Private(ISLocalToGlobalMapping mapping) 481d4bb536fSBarry Smith { 4826849ba73SBarry Smith PetscErrorCode ierr; 48332dcc486SBarry Smith PetscInt i,*idx = mapping->indices,n = mapping->n,end,start,*globals; 484d4bb536fSBarry Smith 4853a40ed3dSBarry Smith PetscFunctionBegin; 486d4bb536fSBarry Smith end = 0; 487ec268f7cSJed Brown start = PETSC_MAX_INT; 488d4bb536fSBarry Smith 489d4bb536fSBarry Smith for (i=0; i<n; i++) { 490d4bb536fSBarry Smith if (idx[i] < 0) continue; 491d4bb536fSBarry Smith if (idx[i] < start) start = idx[i]; 492d4bb536fSBarry Smith if (idx[i] > end) end = idx[i]; 493d4bb536fSBarry Smith } 494d4bb536fSBarry Smith if (start > end) {start = 0; end = -1;} 495d4bb536fSBarry Smith mapping->globalstart = start; 496d4bb536fSBarry Smith mapping->globalend = end; 497d4bb536fSBarry Smith 498785e854fSJed Brown ierr = PetscMalloc1((end-start+2),&globals);CHKERRQ(ierr); 499b0a32e0cSBarry Smith mapping->globals = globals; 500f6e5521dSKarl Rupp for (i=0; i<end-start+1; i++) globals[i] = -1; 501d4bb536fSBarry Smith for (i=0; i<n; i++) { 502d4bb536fSBarry Smith if (idx[i] < 0) continue; 503d4bb536fSBarry Smith globals[idx[i] - start] = i; 504d4bb536fSBarry Smith } 505d4bb536fSBarry Smith 5063bb1ff40SBarry Smith ierr = PetscLogObjectMemory((PetscObject)mapping,(end-start+1)*sizeof(PetscInt));CHKERRQ(ierr); 5073a40ed3dSBarry Smith PetscFunctionReturn(0); 508d4bb536fSBarry Smith } 509d4bb536fSBarry Smith 5104a2ae208SSatish Balay #undef __FUNCT__ 5114a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingApply" 512d4bb536fSBarry Smith /*@ 513a997ad1aSLois Curfman McInnes ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers 514a997ad1aSLois Curfman McInnes specified with a global numbering. 515d4bb536fSBarry Smith 516b9cd556bSLois Curfman McInnes Not collective 517b9cd556bSLois Curfman McInnes 518d4bb536fSBarry Smith Input Parameters: 519b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 520d4bb536fSBarry Smith . type - IS_GTOLM_MASK - replaces global indices with no local value with -1 521d4bb536fSBarry Smith IS_GTOLM_DROP - drops the indices with no local value from the output list 522d4bb536fSBarry Smith . n - number of global indices to map 523b9cd556bSLois Curfman McInnes - idx - global indices to map 524d4bb536fSBarry Smith 525d4bb536fSBarry Smith Output Parameters: 526b9cd556bSLois Curfman McInnes + nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n) 527b9cd556bSLois Curfman McInnes - idxout - local index of each global index, one must pass in an array long enough 528e182c471SBarry Smith to hold all the indices. You can call ISGlobalToLocalMappingApply() with 5290298fd71SBarry Smith idxout == NULL to determine the required length (returned in nout) 530e182c471SBarry Smith and then allocate the required space and call ISGlobalToLocalMappingApply() 531e182c471SBarry Smith a second time to set the values. 532d4bb536fSBarry Smith 533b9cd556bSLois Curfman McInnes Notes: 5340298fd71SBarry Smith Either nout or idxout may be NULL. idx and idxout may be identical. 535d4bb536fSBarry Smith 5360f5bd95cSBarry Smith This is not scalable in memory usage. Each processor requires O(Nglobal) size 5370f5bd95cSBarry Smith array to compute these. 5380f5bd95cSBarry Smith 539a997ad1aSLois Curfman McInnes Level: advanced 540a997ad1aSLois Curfman McInnes 54132fd6b96SBarry Smith Developer Note: The manual page states that idx and idxout may be identical but the calling 54232fd6b96SBarry Smith sequence declares idx as const so it cannot be the same as idxout. 54332fd6b96SBarry Smith 544273d9f13SBarry Smith Concepts: mapping^global to local 545d4bb536fSBarry Smith 5469d90f715SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISGlobalToLocalMappingApplyBlock(), ISLocalToGlobalMappingCreate(), 547d4bb536fSBarry Smith ISLocalToGlobalMappingDestroy() 548d4bb536fSBarry Smith @*/ 5497087cfbeSBarry Smith PetscErrorCode ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingType type, 55032dcc486SBarry Smith PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[]) 551d4bb536fSBarry Smith { 5529d90f715SBarry Smith PetscInt i,*globals,nf = 0,tmp,start,end,bs; 5539d90f715SBarry Smith PetscErrorCode ierr; 5549d90f715SBarry Smith 5559d90f715SBarry Smith PetscFunctionBegin; 5569d90f715SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 5579d90f715SBarry Smith if (!mapping->globals) { 5589d90f715SBarry Smith ierr = ISGlobalToLocalMappingSetUp_Private(mapping);CHKERRQ(ierr); 5599d90f715SBarry Smith } 5609d90f715SBarry Smith globals = mapping->globals; 5619d90f715SBarry Smith start = mapping->globalstart; 5629d90f715SBarry Smith end = mapping->globalend; 5639d90f715SBarry Smith bs = mapping->bs; 5649d90f715SBarry Smith 5659d90f715SBarry Smith if (type == IS_GTOLM_MASK) { 5669d90f715SBarry Smith if (idxout) { 5679d90f715SBarry Smith for (i=0; i<n; i++) { 5689d90f715SBarry Smith if (idx[i] < 0) idxout[i] = idx[i]; 5699d90f715SBarry Smith else if (idx[i] < bs*start) idxout[i] = -1; 5709d90f715SBarry Smith else if (idx[i] > bs*end) idxout[i] = -1; 5719d90f715SBarry Smith else idxout[i] = bs*globals[idx[i]/bs - start] + (idx[i] % bs); 5729d90f715SBarry Smith } 5739d90f715SBarry Smith } 5749d90f715SBarry Smith if (nout) *nout = n; 5759d90f715SBarry Smith } else { 5769d90f715SBarry Smith if (idxout) { 5779d90f715SBarry Smith for (i=0; i<n; i++) { 5789d90f715SBarry Smith if (idx[i] < 0) continue; 5799d90f715SBarry Smith if (idx[i] < bs*start) continue; 5809d90f715SBarry Smith if (idx[i] > bs*end) continue; 5819d90f715SBarry Smith tmp = bs*globals[idx[i]/bs - start] + (idx[i] % bs); 5829d90f715SBarry Smith if (tmp < 0) continue; 5839d90f715SBarry Smith idxout[nf++] = tmp; 5849d90f715SBarry Smith } 5859d90f715SBarry Smith } else { 5869d90f715SBarry Smith for (i=0; i<n; i++) { 5879d90f715SBarry Smith if (idx[i] < 0) continue; 5889d90f715SBarry Smith if (idx[i] < bs*start) continue; 5899d90f715SBarry Smith if (idx[i] > bs*end) continue; 5909d90f715SBarry Smith tmp = bs*globals[idx[i]/bs - start] + (idx[i] % bs); 5919d90f715SBarry Smith if (tmp < 0) continue; 5929d90f715SBarry Smith nf++; 5939d90f715SBarry Smith } 5949d90f715SBarry Smith } 5959d90f715SBarry Smith if (nout) *nout = nf; 5969d90f715SBarry Smith } 5979d90f715SBarry Smith PetscFunctionReturn(0); 5989d90f715SBarry Smith } 5999d90f715SBarry Smith 6009d90f715SBarry Smith #undef __FUNCT__ 6019d90f715SBarry Smith #define __FUNCT__ "ISGlobalToLocalMappingApplyBlock" 6029d90f715SBarry Smith /*@ 6039d90f715SBarry Smith ISGlobalToLocalMappingApplyBlock - Provides the local block numbering for a list of integers 6049d90f715SBarry Smith specified with a block global numbering. 6059d90f715SBarry Smith 6069d90f715SBarry Smith Not collective 6079d90f715SBarry Smith 6089d90f715SBarry Smith Input Parameters: 6099d90f715SBarry Smith + mapping - mapping between local and global numbering 6109d90f715SBarry Smith . type - IS_GTOLM_MASK - replaces global indices with no local value with -1 6119d90f715SBarry Smith IS_GTOLM_DROP - drops the indices with no local value from the output list 6129d90f715SBarry Smith . n - number of global indices to map 6139d90f715SBarry Smith - idx - global indices to map 6149d90f715SBarry Smith 6159d90f715SBarry Smith Output Parameters: 6169d90f715SBarry Smith + nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n) 6179d90f715SBarry Smith - idxout - local index of each global index, one must pass in an array long enough 6189d90f715SBarry Smith to hold all the indices. You can call ISGlobalToLocalMappingApplyBlock() with 6199d90f715SBarry Smith idxout == NULL to determine the required length (returned in nout) 6209d90f715SBarry Smith and then allocate the required space and call ISGlobalToLocalMappingApplyBlock() 6219d90f715SBarry Smith a second time to set the values. 6229d90f715SBarry Smith 6239d90f715SBarry Smith Notes: 6249d90f715SBarry Smith Either nout or idxout may be NULL. idx and idxout may be identical. 6259d90f715SBarry Smith 6269d90f715SBarry Smith This is not scalable in memory usage. Each processor requires O(Nglobal) size 6279d90f715SBarry Smith array to compute these. 6289d90f715SBarry Smith 6299d90f715SBarry Smith Level: advanced 6309d90f715SBarry Smith 6319d90f715SBarry Smith Developer Note: The manual page states that idx and idxout may be identical but the calling 6329d90f715SBarry Smith sequence declares idx as const so it cannot be the same as idxout. 6339d90f715SBarry Smith 6349d90f715SBarry Smith Concepts: mapping^global to local 6359d90f715SBarry Smith 6369d90f715SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISGlobalToLocalMappingApply(), ISLocalToGlobalMappingCreate(), 6379d90f715SBarry Smith ISLocalToGlobalMappingDestroy() 6389d90f715SBarry Smith @*/ 6399d90f715SBarry Smith PetscErrorCode ISGlobalToLocalMappingApplyBlock(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingType type, 6409d90f715SBarry Smith PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[]) 6419d90f715SBarry Smith { 64232dcc486SBarry Smith PetscInt i,*globals,nf = 0,tmp,start,end; 6436849ba73SBarry Smith PetscErrorCode ierr; 644d4bb536fSBarry Smith 6453a40ed3dSBarry Smith PetscFunctionBegin; 6460700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 647d4bb536fSBarry Smith if (!mapping->globals) { 648d4bb536fSBarry Smith ierr = ISGlobalToLocalMappingSetUp_Private(mapping);CHKERRQ(ierr); 649d4bb536fSBarry Smith } 650d4bb536fSBarry Smith globals = mapping->globals; 651d4bb536fSBarry Smith start = mapping->globalstart; 652d4bb536fSBarry Smith end = mapping->globalend; 653d4bb536fSBarry Smith 654d4bb536fSBarry Smith if (type == IS_GTOLM_MASK) { 655d4bb536fSBarry Smith if (idxout) { 656d4bb536fSBarry Smith for (i=0; i<n; i++) { 657d4bb536fSBarry Smith if (idx[i] < 0) idxout[i] = idx[i]; 658d4bb536fSBarry Smith else if (idx[i] < start) idxout[i] = -1; 659d4bb536fSBarry Smith else if (idx[i] > end) idxout[i] = -1; 660d4bb536fSBarry Smith else idxout[i] = globals[idx[i] - start]; 661d4bb536fSBarry Smith } 662d4bb536fSBarry Smith } 663d4bb536fSBarry Smith if (nout) *nout = n; 664d4bb536fSBarry Smith } else { 665d4bb536fSBarry Smith if (idxout) { 666d4bb536fSBarry Smith for (i=0; i<n; i++) { 667d4bb536fSBarry Smith if (idx[i] < 0) continue; 668d4bb536fSBarry Smith if (idx[i] < start) continue; 669d4bb536fSBarry Smith if (idx[i] > end) continue; 670d4bb536fSBarry Smith tmp = globals[idx[i] - start]; 671d4bb536fSBarry Smith if (tmp < 0) continue; 672d4bb536fSBarry Smith idxout[nf++] = tmp; 673d4bb536fSBarry Smith } 674d4bb536fSBarry Smith } else { 675d4bb536fSBarry Smith for (i=0; i<n; i++) { 676d4bb536fSBarry Smith if (idx[i] < 0) continue; 677d4bb536fSBarry Smith if (idx[i] < start) continue; 678d4bb536fSBarry Smith if (idx[i] > end) continue; 679d4bb536fSBarry Smith tmp = globals[idx[i] - start]; 680d4bb536fSBarry Smith if (tmp < 0) continue; 681d4bb536fSBarry Smith nf++; 682d4bb536fSBarry Smith } 683d4bb536fSBarry Smith } 684d4bb536fSBarry Smith if (nout) *nout = nf; 685d4bb536fSBarry Smith } 6863a40ed3dSBarry Smith PetscFunctionReturn(0); 687d4bb536fSBarry Smith } 68890f02eecSBarry Smith 6894a2ae208SSatish Balay #undef __FUNCT__ 6906a818285SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetBlockInfo" 69189d82c54SBarry Smith /*@C 6926a818285SBarry Smith ISLocalToGlobalMappingGetBlockInfo - Gets the neighbor information for each processor and 69389d82c54SBarry Smith each index shared by more than one processor 69489d82c54SBarry Smith 69589d82c54SBarry Smith Collective on ISLocalToGlobalMapping 69689d82c54SBarry Smith 69789d82c54SBarry Smith Input Parameters: 69889d82c54SBarry Smith . mapping - the mapping from local to global indexing 69989d82c54SBarry Smith 70089d82c54SBarry Smith Output Parameter: 70189d82c54SBarry Smith + nproc - number of processors that are connected to this one 70289d82c54SBarry Smith . proc - neighboring processors 70307b52d57SBarry Smith . numproc - number of indices for each subdomain (processor) 7043463a7baSJed Brown - indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering) 70589d82c54SBarry Smith 70689d82c54SBarry Smith Level: advanced 70789d82c54SBarry Smith 708273d9f13SBarry Smith Concepts: mapping^local to global 70989d82c54SBarry Smith 7102cfcea29SBarry Smith Fortran Usage: 7112cfcea29SBarry Smith $ ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by 7122cfcea29SBarry Smith $ ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc], 7132cfcea29SBarry Smith PetscInt indices[nproc][numprocmax],ierr) 7142cfcea29SBarry Smith There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and 7152cfcea29SBarry Smith indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough. 7162cfcea29SBarry Smith 7172cfcea29SBarry Smith 71807b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 71907b52d57SBarry Smith ISLocalToGlobalMappingRestoreInfo() 72089d82c54SBarry Smith @*/ 7216a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 72289d82c54SBarry Smith { 7236849ba73SBarry Smith PetscErrorCode ierr; 72497f1f81fSBarry Smith PetscMPIInt size,rank,tag1,tag2,tag3,*len,*source,imdex; 72532dcc486SBarry Smith PetscInt i,n = mapping->n,Ng,ng,max = 0,*lindices = mapping->indices; 72632dcc486SBarry Smith PetscInt *nprocs,*owner,nsends,*sends,j,*starts,nmax,nrecvs,*recvs,proc; 72797f1f81fSBarry Smith PetscInt cnt,scale,*ownedsenders,*nownedsenders,rstart,nowned; 72832dcc486SBarry Smith PetscInt node,nownedm,nt,*sends2,nsends2,*starts2,*lens2,*dest,nrecvs2,*starts3,*recvs2,k,*bprocs,*tmp; 72932dcc486SBarry Smith PetscInt first_procs,first_numprocs,*first_indices; 73089d82c54SBarry Smith MPI_Request *recv_waits,*send_waits; 73130dcb7c9SBarry Smith MPI_Status recv_status,*send_status,*recv_statuses; 732ce94432eSBarry Smith MPI_Comm comm; 733ace3abfcSBarry Smith PetscBool debug = PETSC_FALSE; 73489d82c54SBarry Smith 73589d82c54SBarry Smith PetscFunctionBegin; 7360700a824SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 737ce94432eSBarry Smith ierr = PetscObjectGetComm((PetscObject)mapping,&comm);CHKERRQ(ierr); 73824cf384cSBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 73924cf384cSBarry Smith ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 74024cf384cSBarry Smith if (size == 1) { 74124cf384cSBarry Smith *nproc = 0; 7420298fd71SBarry Smith *procs = NULL; 74332dcc486SBarry Smith ierr = PetscMalloc(sizeof(PetscInt),numprocs);CHKERRQ(ierr); 7441e2105dcSBarry Smith (*numprocs)[0] = 0; 74532dcc486SBarry Smith ierr = PetscMalloc(sizeof(PetscInt*),indices);CHKERRQ(ierr); 7460298fd71SBarry Smith (*indices)[0] = NULL; 74724cf384cSBarry Smith PetscFunctionReturn(0); 74824cf384cSBarry Smith } 74924cf384cSBarry Smith 7500298fd71SBarry Smith ierr = PetscOptionsGetBool(NULL,"-islocaltoglobalmappinggetinfo_debug",&debug,NULL);CHKERRQ(ierr); 75107b52d57SBarry Smith 7523677ff5aSBarry Smith /* 7536a818285SBarry Smith Notes on ISLocalToGlobalMappingGetBlockInfo 7543677ff5aSBarry Smith 7553677ff5aSBarry Smith globally owned node - the nodes that have been assigned to this processor in global 7563677ff5aSBarry Smith numbering, just for this routine. 7573677ff5aSBarry Smith 7583677ff5aSBarry Smith nontrivial globally owned node - node assigned to this processor that is on a subdomain 7593677ff5aSBarry Smith boundary (i.e. is has more than one local owner) 7603677ff5aSBarry Smith 7613677ff5aSBarry Smith locally owned node - node that exists on this processors subdomain 7623677ff5aSBarry Smith 7633677ff5aSBarry Smith nontrivial locally owned node - node that is not in the interior (i.e. has more than one 7643677ff5aSBarry Smith local subdomain 7653677ff5aSBarry Smith */ 76624cf384cSBarry Smith ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag1);CHKERRQ(ierr); 76724cf384cSBarry Smith ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag2);CHKERRQ(ierr); 76824cf384cSBarry Smith ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag3);CHKERRQ(ierr); 76989d82c54SBarry Smith 77089d82c54SBarry Smith for (i=0; i<n; i++) { 77189d82c54SBarry Smith if (lindices[i] > max) max = lindices[i]; 77289d82c54SBarry Smith } 77332dcc486SBarry Smith ierr = MPI_Allreduce(&max,&Ng,1,MPIU_INT,MPI_MAX,comm);CHKERRQ(ierr); 77478058e43SBarry Smith Ng++; 77589d82c54SBarry Smith ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 77689d82c54SBarry Smith ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr); 777bc8ff85bSBarry Smith scale = Ng/size + 1; 778a2e34c3dSBarry Smith ng = scale; if (rank == size-1) ng = Ng - scale*(size-1); ng = PetscMax(1,ng); 779caba0dd0SBarry Smith rstart = scale*rank; 78089d82c54SBarry Smith 78189d82c54SBarry Smith /* determine ownership ranges of global indices */ 782785e854fSJed Brown ierr = PetscMalloc1(2*size,&nprocs);CHKERRQ(ierr); 78332dcc486SBarry Smith ierr = PetscMemzero(nprocs,2*size*sizeof(PetscInt));CHKERRQ(ierr); 78489d82c54SBarry Smith 78589d82c54SBarry Smith /* determine owners of each local node */ 786785e854fSJed Brown ierr = PetscMalloc1(n,&owner);CHKERRQ(ierr); 78789d82c54SBarry Smith for (i=0; i<n; i++) { 7883677ff5aSBarry Smith proc = lindices[i]/scale; /* processor that globally owns this index */ 78927c402fcSBarry Smith nprocs[2*proc+1] = 1; /* processor globally owns at least one of ours */ 7903677ff5aSBarry Smith owner[i] = proc; 79127c402fcSBarry Smith nprocs[2*proc]++; /* count of how many that processor globally owns of ours */ 79289d82c54SBarry Smith } 79327c402fcSBarry Smith nsends = 0; for (i=0; i<size; i++) nsends += nprocs[2*i+1]; 7947904a332SBarry Smith ierr = PetscInfo1(mapping,"Number of global owners for my local data %D\n",nsends);CHKERRQ(ierr); 79589d82c54SBarry Smith 79689d82c54SBarry Smith /* inform other processors of number of messages and max length*/ 79727c402fcSBarry Smith ierr = PetscMaxSum(comm,nprocs,&nmax,&nrecvs);CHKERRQ(ierr); 7987904a332SBarry Smith ierr = PetscInfo1(mapping,"Number of local owners for my global data %D\n",nrecvs);CHKERRQ(ierr); 79989d82c54SBarry Smith 80089d82c54SBarry Smith /* post receives for owned rows */ 801785e854fSJed Brown ierr = PetscMalloc1((2*nrecvs+1)*(nmax+1),&recvs);CHKERRQ(ierr); 802785e854fSJed Brown ierr = PetscMalloc1((nrecvs+1),&recv_waits);CHKERRQ(ierr); 80389d82c54SBarry Smith for (i=0; i<nrecvs; i++) { 80432dcc486SBarry Smith ierr = MPI_Irecv(recvs+2*nmax*i,2*nmax,MPIU_INT,MPI_ANY_SOURCE,tag1,comm,recv_waits+i);CHKERRQ(ierr); 80589d82c54SBarry Smith } 80689d82c54SBarry Smith 80789d82c54SBarry Smith /* pack messages containing lists of local nodes to owners */ 808785e854fSJed Brown ierr = PetscMalloc1((2*n+1),&sends);CHKERRQ(ierr); 809785e854fSJed Brown ierr = PetscMalloc1((size+1),&starts);CHKERRQ(ierr); 81089d82c54SBarry Smith starts[0] = 0; 811f6e5521dSKarl Rupp for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2]; 81289d82c54SBarry Smith for (i=0; i<n; i++) { 81389d82c54SBarry Smith sends[starts[owner[i]]++] = lindices[i]; 81430dcb7c9SBarry Smith sends[starts[owner[i]]++] = i; 81589d82c54SBarry Smith } 81689d82c54SBarry Smith ierr = PetscFree(owner);CHKERRQ(ierr); 81789d82c54SBarry Smith starts[0] = 0; 818f6e5521dSKarl Rupp for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2]; 81989d82c54SBarry Smith 82089d82c54SBarry Smith /* send the messages */ 821785e854fSJed Brown ierr = PetscMalloc1((nsends+1),&send_waits);CHKERRQ(ierr); 822785e854fSJed Brown ierr = PetscMalloc1((nsends+1),&dest);CHKERRQ(ierr); 82389d82c54SBarry Smith cnt = 0; 82489d82c54SBarry Smith for (i=0; i<size; i++) { 82527c402fcSBarry Smith if (nprocs[2*i]) { 82632dcc486SBarry Smith ierr = MPI_Isend(sends+starts[i],2*nprocs[2*i],MPIU_INT,i,tag1,comm,send_waits+cnt);CHKERRQ(ierr); 82730dcb7c9SBarry Smith dest[cnt] = i; 82889d82c54SBarry Smith cnt++; 82989d82c54SBarry Smith } 83089d82c54SBarry Smith } 83189d82c54SBarry Smith ierr = PetscFree(starts);CHKERRQ(ierr); 83289d82c54SBarry Smith 83389d82c54SBarry Smith /* wait on receives */ 834785e854fSJed Brown ierr = PetscMalloc1((nrecvs+1),&source);CHKERRQ(ierr); 835785e854fSJed Brown ierr = PetscMalloc1((nrecvs+1),&len);CHKERRQ(ierr); 83689d82c54SBarry Smith cnt = nrecvs; 837785e854fSJed Brown ierr = PetscMalloc1((ng+1),&nownedsenders);CHKERRQ(ierr); 83832dcc486SBarry Smith ierr = PetscMemzero(nownedsenders,ng*sizeof(PetscInt));CHKERRQ(ierr); 83989d82c54SBarry Smith while (cnt) { 84089d82c54SBarry Smith ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr); 84189d82c54SBarry Smith /* unpack receives into our local space */ 84232dcc486SBarry Smith ierr = MPI_Get_count(&recv_status,MPIU_INT,&len[imdex]);CHKERRQ(ierr); 84389d82c54SBarry Smith source[imdex] = recv_status.MPI_SOURCE; 84430dcb7c9SBarry Smith len[imdex] = len[imdex]/2; 845caba0dd0SBarry Smith /* count how many local owners for each of my global owned indices */ 84630dcb7c9SBarry Smith for (i=0; i<len[imdex]; i++) nownedsenders[recvs[2*imdex*nmax+2*i]-rstart]++; 84789d82c54SBarry Smith cnt--; 84889d82c54SBarry Smith } 84989d82c54SBarry Smith ierr = PetscFree(recv_waits);CHKERRQ(ierr); 85089d82c54SBarry Smith 85130dcb7c9SBarry Smith /* count how many globally owned indices are on an edge multiplied by how many processors own them. */ 852bc8ff85bSBarry Smith nowned = 0; 853bc8ff85bSBarry Smith nownedm = 0; 854bc8ff85bSBarry Smith for (i=0; i<ng; i++) { 855bc8ff85bSBarry Smith if (nownedsenders[i] > 1) {nownedm += nownedsenders[i]; nowned++;} 856bc8ff85bSBarry Smith } 857bc8ff85bSBarry Smith 858bc8ff85bSBarry Smith /* create single array to contain rank of all local owners of each globally owned index */ 859785e854fSJed Brown ierr = PetscMalloc1((nownedm+1),&ownedsenders);CHKERRQ(ierr); 860785e854fSJed Brown ierr = PetscMalloc1((ng+1),&starts);CHKERRQ(ierr); 861bc8ff85bSBarry Smith starts[0] = 0; 862bc8ff85bSBarry Smith for (i=1; i<ng; i++) { 863bc8ff85bSBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 864bc8ff85bSBarry Smith else starts[i] = starts[i-1]; 865bc8ff85bSBarry Smith } 866bc8ff85bSBarry Smith 86730dcb7c9SBarry Smith /* for each nontrival globally owned node list all arriving processors */ 868bc8ff85bSBarry Smith for (i=0; i<nrecvs; i++) { 869bc8ff85bSBarry Smith for (j=0; j<len[i]; j++) { 87030dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 871f6e5521dSKarl Rupp if (nownedsenders[node] > 1) ownedsenders[starts[node]++] = source[i]; 872bc8ff85bSBarry Smith } 873bc8ff85bSBarry Smith } 874bc8ff85bSBarry Smith 87507b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 87630dcb7c9SBarry Smith starts[0] = 0; 87730dcb7c9SBarry Smith for (i=1; i<ng; i++) { 87830dcb7c9SBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 87930dcb7c9SBarry Smith else starts[i] = starts[i-1]; 88030dcb7c9SBarry Smith } 88130dcb7c9SBarry Smith for (i=0; i<ng; i++) { 88230dcb7c9SBarry Smith if (nownedsenders[i] > 1) { 8837904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"[%d] global node %D local owner processors: ",rank,i+rstart);CHKERRQ(ierr); 88430dcb7c9SBarry Smith for (j=0; j<nownedsenders[i]; j++) { 8857904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"%D ",ownedsenders[starts[i]+j]);CHKERRQ(ierr); 88630dcb7c9SBarry Smith } 88730dcb7c9SBarry Smith ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr); 88830dcb7c9SBarry Smith } 88930dcb7c9SBarry Smith } 8900ec8b6e3SBarry Smith ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr); 89107b52d57SBarry Smith } /* ----------------------------------- */ 89230dcb7c9SBarry Smith 8933677ff5aSBarry Smith /* wait on original sends */ 8943a96401aSBarry Smith if (nsends) { 895785e854fSJed Brown ierr = PetscMalloc1(nsends,&send_status);CHKERRQ(ierr); 8963a96401aSBarry Smith ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr); 8973a96401aSBarry Smith ierr = PetscFree(send_status);CHKERRQ(ierr); 8983a96401aSBarry Smith } 89989d82c54SBarry Smith ierr = PetscFree(send_waits);CHKERRQ(ierr); 9003a96401aSBarry Smith ierr = PetscFree(sends);CHKERRQ(ierr); 9013677ff5aSBarry Smith ierr = PetscFree(nprocs);CHKERRQ(ierr); 9023677ff5aSBarry Smith 9033677ff5aSBarry Smith /* pack messages to send back to local owners */ 90430dcb7c9SBarry Smith starts[0] = 0; 90530dcb7c9SBarry Smith for (i=1; i<ng; i++) { 90630dcb7c9SBarry Smith if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1]; 90730dcb7c9SBarry Smith else starts[i] = starts[i-1]; 90830dcb7c9SBarry Smith } 90930dcb7c9SBarry Smith nsends2 = nrecvs; 910785e854fSJed Brown ierr = PetscMalloc1((nsends2+1),&nprocs);CHKERRQ(ierr); /* length of each message */ 91130dcb7c9SBarry Smith for (i=0; i<nrecvs; i++) { 91230dcb7c9SBarry Smith nprocs[i] = 1; 91330dcb7c9SBarry Smith for (j=0; j<len[i]; j++) { 91430dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 915f6e5521dSKarl Rupp if (nownedsenders[node] > 1) nprocs[i] += 2 + nownedsenders[node]; 91630dcb7c9SBarry Smith } 91730dcb7c9SBarry Smith } 918f6e5521dSKarl Rupp nt = 0; 919f6e5521dSKarl Rupp for (i=0; i<nsends2; i++) nt += nprocs[i]; 920f6e5521dSKarl Rupp 921785e854fSJed Brown ierr = PetscMalloc1((nt+1),&sends2);CHKERRQ(ierr); 922785e854fSJed Brown ierr = PetscMalloc1((nsends2+1),&starts2);CHKERRQ(ierr); 923f6e5521dSKarl Rupp 924f6e5521dSKarl Rupp starts2[0] = 0; 925f6e5521dSKarl Rupp for (i=1; i<nsends2; i++) starts2[i] = starts2[i-1] + nprocs[i-1]; 92630dcb7c9SBarry Smith /* 92730dcb7c9SBarry Smith Each message is 1 + nprocs[i] long, and consists of 92830dcb7c9SBarry Smith (0) the number of nodes being sent back 92930dcb7c9SBarry Smith (1) the local node number, 93030dcb7c9SBarry Smith (2) the number of processors sharing it, 93130dcb7c9SBarry Smith (3) the processors sharing it 93230dcb7c9SBarry Smith */ 93330dcb7c9SBarry Smith for (i=0; i<nsends2; i++) { 93430dcb7c9SBarry Smith cnt = 1; 93530dcb7c9SBarry Smith sends2[starts2[i]] = 0; 93630dcb7c9SBarry Smith for (j=0; j<len[i]; j++) { 93730dcb7c9SBarry Smith node = recvs[2*i*nmax+2*j]-rstart; 93830dcb7c9SBarry Smith if (nownedsenders[node] > 1) { 93930dcb7c9SBarry Smith sends2[starts2[i]]++; 94030dcb7c9SBarry Smith sends2[starts2[i]+cnt++] = recvs[2*i*nmax+2*j+1]; 94130dcb7c9SBarry Smith sends2[starts2[i]+cnt++] = nownedsenders[node]; 94232dcc486SBarry Smith ierr = PetscMemcpy(&sends2[starts2[i]+cnt],&ownedsenders[starts[node]],nownedsenders[node]*sizeof(PetscInt));CHKERRQ(ierr); 94330dcb7c9SBarry Smith cnt += nownedsenders[node]; 94430dcb7c9SBarry Smith } 94530dcb7c9SBarry Smith } 94630dcb7c9SBarry Smith } 94730dcb7c9SBarry Smith 94830dcb7c9SBarry Smith /* receive the message lengths */ 94930dcb7c9SBarry Smith nrecvs2 = nsends; 950785e854fSJed Brown ierr = PetscMalloc1((nrecvs2+1),&lens2);CHKERRQ(ierr); 951785e854fSJed Brown ierr = PetscMalloc1((nrecvs2+1),&starts3);CHKERRQ(ierr); 952785e854fSJed Brown ierr = PetscMalloc1((nrecvs2+1),&recv_waits);CHKERRQ(ierr); 95330dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 954d44834fbSBarry Smith ierr = MPI_Irecv(&lens2[i],1,MPIU_INT,dest[i],tag2,comm,recv_waits+i);CHKERRQ(ierr); 95530dcb7c9SBarry Smith } 956d44834fbSBarry Smith 9578a8e0b3aSBarry Smith /* send the message lengths */ 9588a8e0b3aSBarry Smith for (i=0; i<nsends2; i++) { 9598a8e0b3aSBarry Smith ierr = MPI_Send(&nprocs[i],1,MPIU_INT,source[i],tag2,comm);CHKERRQ(ierr); 9608a8e0b3aSBarry Smith } 9618a8e0b3aSBarry Smith 962d44834fbSBarry Smith /* wait on receives of lens */ 9630c468ba9SBarry Smith if (nrecvs2) { 964785e854fSJed Brown ierr = PetscMalloc1(nrecvs2,&recv_statuses);CHKERRQ(ierr); 965d44834fbSBarry Smith ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr); 966d44834fbSBarry Smith ierr = PetscFree(recv_statuses);CHKERRQ(ierr); 9670c468ba9SBarry Smith } 968a2ea699eSBarry Smith ierr = PetscFree(recv_waits);CHKERRQ(ierr); 969d44834fbSBarry Smith 97030dcb7c9SBarry Smith starts3[0] = 0; 971d44834fbSBarry Smith nt = 0; 97230dcb7c9SBarry Smith for (i=0; i<nrecvs2-1; i++) { 97330dcb7c9SBarry Smith starts3[i+1] = starts3[i] + lens2[i]; 974d44834fbSBarry Smith nt += lens2[i]; 97530dcb7c9SBarry Smith } 97676466f69SStefano Zampini if (nrecvs2) nt += lens2[nrecvs2-1]; 977d44834fbSBarry Smith 978785e854fSJed Brown ierr = PetscMalloc1((nt+1),&recvs2);CHKERRQ(ierr); 979785e854fSJed Brown ierr = PetscMalloc1((nrecvs2+1),&recv_waits);CHKERRQ(ierr); 98052b72c4aSBarry Smith for (i=0; i<nrecvs2; i++) { 98132dcc486SBarry Smith ierr = MPI_Irecv(recvs2+starts3[i],lens2[i],MPIU_INT,dest[i],tag3,comm,recv_waits+i);CHKERRQ(ierr); 98230dcb7c9SBarry Smith } 98330dcb7c9SBarry Smith 98430dcb7c9SBarry Smith /* send the messages */ 985785e854fSJed Brown ierr = PetscMalloc1((nsends2+1),&send_waits);CHKERRQ(ierr); 98630dcb7c9SBarry Smith for (i=0; i<nsends2; i++) { 98732dcc486SBarry Smith ierr = MPI_Isend(sends2+starts2[i],nprocs[i],MPIU_INT,source[i],tag3,comm,send_waits+i);CHKERRQ(ierr); 98830dcb7c9SBarry Smith } 98930dcb7c9SBarry Smith 99030dcb7c9SBarry Smith /* wait on receives */ 9910c468ba9SBarry Smith if (nrecvs2) { 992785e854fSJed Brown ierr = PetscMalloc1(nrecvs2,&recv_statuses);CHKERRQ(ierr); 99330dcb7c9SBarry Smith ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr); 99430dcb7c9SBarry Smith ierr = PetscFree(recv_statuses);CHKERRQ(ierr); 9950c468ba9SBarry Smith } 99630dcb7c9SBarry Smith ierr = PetscFree(recv_waits);CHKERRQ(ierr); 99730dcb7c9SBarry Smith ierr = PetscFree(nprocs);CHKERRQ(ierr); 99830dcb7c9SBarry Smith 99907b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 100030dcb7c9SBarry Smith cnt = 0; 100130dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 100230dcb7c9SBarry Smith nt = recvs2[cnt++]; 100330dcb7c9SBarry Smith for (j=0; j<nt; j++) { 10047904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"[%d] local node %D number of subdomains %D: ",rank,recvs2[cnt],recvs2[cnt+1]);CHKERRQ(ierr); 100530dcb7c9SBarry Smith for (k=0; k<recvs2[cnt+1]; k++) { 10067904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"%D ",recvs2[cnt+2+k]);CHKERRQ(ierr); 100730dcb7c9SBarry Smith } 100830dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 100930dcb7c9SBarry Smith ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr); 101030dcb7c9SBarry Smith } 101130dcb7c9SBarry Smith } 10120ec8b6e3SBarry Smith ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr); 101307b52d57SBarry Smith } /* ----------------------------------- */ 101430dcb7c9SBarry Smith 101530dcb7c9SBarry Smith /* count number subdomains for each local node */ 1016785e854fSJed Brown ierr = PetscMalloc1(size,&nprocs);CHKERRQ(ierr); 101732dcc486SBarry Smith ierr = PetscMemzero(nprocs,size*sizeof(PetscInt));CHKERRQ(ierr); 101830dcb7c9SBarry Smith cnt = 0; 101930dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 102030dcb7c9SBarry Smith nt = recvs2[cnt++]; 102130dcb7c9SBarry Smith for (j=0; j<nt; j++) { 1022f6e5521dSKarl Rupp for (k=0; k<recvs2[cnt+1]; k++) nprocs[recvs2[cnt+2+k]]++; 102330dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 102430dcb7c9SBarry Smith } 102530dcb7c9SBarry Smith } 102630dcb7c9SBarry Smith nt = 0; for (i=0; i<size; i++) nt += (nprocs[i] > 0); 102730dcb7c9SBarry Smith *nproc = nt; 1028785e854fSJed Brown ierr = PetscMalloc1((nt+1),procs);CHKERRQ(ierr); 1029785e854fSJed Brown ierr = PetscMalloc1((nt+1),numprocs);CHKERRQ(ierr); 1030785e854fSJed Brown ierr = PetscMalloc1((nt+1),indices);CHKERRQ(ierr); 10310298fd71SBarry Smith for (i=0;i<nt+1;i++) (*indices)[i]=NULL; 1032785e854fSJed Brown ierr = PetscMalloc1(size,&bprocs);CHKERRQ(ierr); 103330dcb7c9SBarry Smith cnt = 0; 103430dcb7c9SBarry Smith for (i=0; i<size; i++) { 103530dcb7c9SBarry Smith if (nprocs[i] > 0) { 103630dcb7c9SBarry Smith bprocs[i] = cnt; 103730dcb7c9SBarry Smith (*procs)[cnt] = i; 103830dcb7c9SBarry Smith (*numprocs)[cnt] = nprocs[i]; 1039785e854fSJed Brown ierr = PetscMalloc1(nprocs[i],&(*indices)[cnt]);CHKERRQ(ierr); 104030dcb7c9SBarry Smith cnt++; 104130dcb7c9SBarry Smith } 104230dcb7c9SBarry Smith } 104330dcb7c9SBarry Smith 104430dcb7c9SBarry Smith /* make the list of subdomains for each nontrivial local node */ 104532dcc486SBarry Smith ierr = PetscMemzero(*numprocs,nt*sizeof(PetscInt));CHKERRQ(ierr); 104630dcb7c9SBarry Smith cnt = 0; 104730dcb7c9SBarry Smith for (i=0; i<nrecvs2; i++) { 104830dcb7c9SBarry Smith nt = recvs2[cnt++]; 104930dcb7c9SBarry Smith for (j=0; j<nt; j++) { 1050f6e5521dSKarl Rupp for (k=0; k<recvs2[cnt+1]; k++) (*indices)[bprocs[recvs2[cnt+2+k]]][(*numprocs)[bprocs[recvs2[cnt+2+k]]]++] = recvs2[cnt]; 105130dcb7c9SBarry Smith cnt += 2 + recvs2[cnt+1]; 105230dcb7c9SBarry Smith } 105330dcb7c9SBarry Smith } 105430dcb7c9SBarry Smith ierr = PetscFree(bprocs);CHKERRQ(ierr); 105507b52d57SBarry Smith ierr = PetscFree(recvs2);CHKERRQ(ierr); 105630dcb7c9SBarry Smith 105707b52d57SBarry Smith /* sort the node indexing by their global numbers */ 105807b52d57SBarry Smith nt = *nproc; 105907b52d57SBarry Smith for (i=0; i<nt; i++) { 1060785e854fSJed Brown ierr = PetscMalloc1(((*numprocs)[i]),&tmp);CHKERRQ(ierr); 1061f6e5521dSKarl Rupp for (j=0; j<(*numprocs)[i]; j++) tmp[j] = lindices[(*indices)[i][j]]; 106207b52d57SBarry Smith ierr = PetscSortIntWithArray((*numprocs)[i],tmp,(*indices)[i]);CHKERRQ(ierr); 106307b52d57SBarry Smith ierr = PetscFree(tmp);CHKERRQ(ierr); 106407b52d57SBarry Smith } 106507b52d57SBarry Smith 106607b52d57SBarry Smith if (debug) { /* ----------------------------------- */ 106730dcb7c9SBarry Smith nt = *nproc; 106830dcb7c9SBarry Smith for (i=0; i<nt; i++) { 10697904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"[%d] subdomain %D number of indices %D: ",rank,(*procs)[i],(*numprocs)[i]);CHKERRQ(ierr); 107030dcb7c9SBarry Smith for (j=0; j<(*numprocs)[i]; j++) { 10717904a332SBarry Smith ierr = PetscSynchronizedPrintf(comm,"%D ",(*indices)[i][j]);CHKERRQ(ierr); 107230dcb7c9SBarry Smith } 107330dcb7c9SBarry Smith ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr); 107430dcb7c9SBarry Smith } 10750ec8b6e3SBarry Smith ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr); 107607b52d57SBarry Smith } /* ----------------------------------- */ 107730dcb7c9SBarry Smith 107830dcb7c9SBarry Smith /* wait on sends */ 107930dcb7c9SBarry Smith if (nsends2) { 1080785e854fSJed Brown ierr = PetscMalloc1(nsends2,&send_status);CHKERRQ(ierr); 108130dcb7c9SBarry Smith ierr = MPI_Waitall(nsends2,send_waits,send_status);CHKERRQ(ierr); 108230dcb7c9SBarry Smith ierr = PetscFree(send_status);CHKERRQ(ierr); 108330dcb7c9SBarry Smith } 108430dcb7c9SBarry Smith 108530dcb7c9SBarry Smith ierr = PetscFree(starts3);CHKERRQ(ierr); 108630dcb7c9SBarry Smith ierr = PetscFree(dest);CHKERRQ(ierr); 108730dcb7c9SBarry Smith ierr = PetscFree(send_waits);CHKERRQ(ierr); 10883677ff5aSBarry Smith 1089bc8ff85bSBarry Smith ierr = PetscFree(nownedsenders);CHKERRQ(ierr); 1090bc8ff85bSBarry Smith ierr = PetscFree(ownedsenders);CHKERRQ(ierr); 1091bc8ff85bSBarry Smith ierr = PetscFree(starts);CHKERRQ(ierr); 109230dcb7c9SBarry Smith ierr = PetscFree(starts2);CHKERRQ(ierr); 109330dcb7c9SBarry Smith ierr = PetscFree(lens2);CHKERRQ(ierr); 109489d82c54SBarry Smith 109589d82c54SBarry Smith ierr = PetscFree(source);CHKERRQ(ierr); 109697f1f81fSBarry Smith ierr = PetscFree(len);CHKERRQ(ierr); 109789d82c54SBarry Smith ierr = PetscFree(recvs);CHKERRQ(ierr); 10983a96401aSBarry Smith ierr = PetscFree(nprocs);CHKERRQ(ierr); 109930dcb7c9SBarry Smith ierr = PetscFree(sends2);CHKERRQ(ierr); 110024cf384cSBarry Smith 110124cf384cSBarry Smith /* put the information about myself as the first entry in the list */ 110224cf384cSBarry Smith first_procs = (*procs)[0]; 110324cf384cSBarry Smith first_numprocs = (*numprocs)[0]; 110424cf384cSBarry Smith first_indices = (*indices)[0]; 110524cf384cSBarry Smith for (i=0; i<*nproc; i++) { 110624cf384cSBarry Smith if ((*procs)[i] == rank) { 110724cf384cSBarry Smith (*procs)[0] = (*procs)[i]; 110824cf384cSBarry Smith (*numprocs)[0] = (*numprocs)[i]; 110924cf384cSBarry Smith (*indices)[0] = (*indices)[i]; 111024cf384cSBarry Smith (*procs)[i] = first_procs; 111124cf384cSBarry Smith (*numprocs)[i] = first_numprocs; 111224cf384cSBarry Smith (*indices)[i] = first_indices; 111324cf384cSBarry Smith break; 111424cf384cSBarry Smith } 111524cf384cSBarry Smith } 111689d82c54SBarry Smith PetscFunctionReturn(0); 111789d82c54SBarry Smith } 111889d82c54SBarry Smith 11194a2ae208SSatish Balay #undef __FUNCT__ 11206a818285SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingRestoreBlockInfo" 11216a818285SBarry Smith /*@C 11226a818285SBarry Smith ISLocalToGlobalMappingRestoreBlockInfo - Frees the memory allocated by ISLocalToGlobalMappingGetBlockInfo() 11236a818285SBarry Smith 11246a818285SBarry Smith Collective on ISLocalToGlobalMapping 11256a818285SBarry Smith 11266a818285SBarry Smith Input Parameters: 11276a818285SBarry Smith . mapping - the mapping from local to global indexing 11286a818285SBarry Smith 11296a818285SBarry Smith Output Parameter: 11306a818285SBarry Smith + nproc - number of processors that are connected to this one 11316a818285SBarry Smith . proc - neighboring processors 11326a818285SBarry Smith . numproc - number of indices for each processor 11336a818285SBarry Smith - indices - indices of local nodes shared with neighbor (sorted by global numbering) 11346a818285SBarry Smith 11356a818285SBarry Smith Level: advanced 11366a818285SBarry Smith 11376a818285SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 11386a818285SBarry Smith ISLocalToGlobalMappingGetInfo() 11396a818285SBarry Smith @*/ 11406a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreBlockInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 11416a818285SBarry Smith { 11426a818285SBarry Smith PetscErrorCode ierr; 11436a818285SBarry Smith PetscInt i; 11446a818285SBarry Smith 11456a818285SBarry Smith PetscFunctionBegin; 1146*cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 11476a818285SBarry Smith ierr = PetscFree(*procs);CHKERRQ(ierr); 11486a818285SBarry Smith ierr = PetscFree(*numprocs);CHKERRQ(ierr); 11496a818285SBarry Smith if (*indices) { 11506a818285SBarry Smith ierr = PetscFree((*indices)[0]);CHKERRQ(ierr); 11516a818285SBarry Smith for (i=1; i<*nproc; i++) { 11526a818285SBarry Smith ierr = PetscFree((*indices)[i]);CHKERRQ(ierr); 11536a818285SBarry Smith } 11546a818285SBarry Smith ierr = PetscFree(*indices);CHKERRQ(ierr); 11556a818285SBarry Smith } 11566a818285SBarry Smith PetscFunctionReturn(0); 11576a818285SBarry Smith } 11586a818285SBarry Smith 11596a818285SBarry Smith #undef __FUNCT__ 11606a818285SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetInfo" 11616a818285SBarry Smith /*@C 11626a818285SBarry Smith ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each processor and 11636a818285SBarry Smith each index shared by more than one processor 11646a818285SBarry Smith 11656a818285SBarry Smith Collective on ISLocalToGlobalMapping 11666a818285SBarry Smith 11676a818285SBarry Smith Input Parameters: 11686a818285SBarry Smith . mapping - the mapping from local to global indexing 11696a818285SBarry Smith 11706a818285SBarry Smith Output Parameter: 11716a818285SBarry Smith + nproc - number of processors that are connected to this one 11726a818285SBarry Smith . proc - neighboring processors 11736a818285SBarry Smith . numproc - number of indices for each subdomain (processor) 11746a818285SBarry Smith - indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering) 11756a818285SBarry Smith 11766a818285SBarry Smith Level: advanced 11776a818285SBarry Smith 11786a818285SBarry Smith Concepts: mapping^local to global 11796a818285SBarry Smith 11806a818285SBarry Smith Fortran Usage: 11816a818285SBarry Smith $ ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by 11826a818285SBarry Smith $ ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc], 11836a818285SBarry Smith PetscInt indices[nproc][numprocmax],ierr) 11846a818285SBarry Smith There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and 11856a818285SBarry Smith indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough. 11866a818285SBarry Smith 11876a818285SBarry Smith 11886a818285SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 11896a818285SBarry Smith ISLocalToGlobalMappingRestoreInfo() 11906a818285SBarry Smith @*/ 11916a818285SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 11926a818285SBarry Smith { 11936a818285SBarry Smith PetscErrorCode ierr; 11946a818285SBarry Smith PetscInt **bindices = NULL,bs = mapping->bs,i,j,k; 11956a818285SBarry Smith 11966a818285SBarry Smith PetscFunctionBegin; 11976a818285SBarry Smith PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1); 11986a818285SBarry Smith ierr = ISLocalToGlobalMappingGetBlockInfo(mapping,nproc,procs,numprocs,&bindices);CHKERRQ(ierr); 1199732f65e3SBarry Smith ierr = PetscCalloc1(*nproc,&*indices);CHKERRQ(ierr); 12006a818285SBarry Smith for (i=0; i<*nproc; i++) { 12016a818285SBarry Smith ierr = PetscMalloc1(bs*(*numprocs)[i],&(*indices)[i]);CHKERRQ(ierr); 12026a818285SBarry Smith for (j=0; j<(*numprocs)[i]; j++) { 12036a818285SBarry Smith for (k=0; k<bs; k++) { 12046a818285SBarry Smith (*indices)[i][j*bs+k] = bs*bindices[i][j] + k; 12056a818285SBarry Smith } 12066a818285SBarry Smith } 12076a818285SBarry Smith (*numprocs)[i] *= bs; 12086a818285SBarry Smith } 12096a818285SBarry Smith if (bindices) { 12106a818285SBarry Smith ierr = PetscFree(bindices[0]);CHKERRQ(ierr); 12116a818285SBarry Smith for (i=1; i<*nproc; i++) { 12126a818285SBarry Smith ierr = PetscFree(bindices[i]);CHKERRQ(ierr); 12136a818285SBarry Smith } 12146a818285SBarry Smith ierr = PetscFree(bindices);CHKERRQ(ierr); 12156a818285SBarry Smith } 12166a818285SBarry Smith PetscFunctionReturn(0); 12176a818285SBarry Smith } 12186a818285SBarry Smith 12196a818285SBarry Smith #undef __FUNCT__ 12204a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingRestoreInfo" 122107b52d57SBarry Smith /*@C 122207b52d57SBarry Smith ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by ISLocalToGlobalMappingGetInfo() 122389d82c54SBarry Smith 122407b52d57SBarry Smith Collective on ISLocalToGlobalMapping 122507b52d57SBarry Smith 122607b52d57SBarry Smith Input Parameters: 122707b52d57SBarry Smith . mapping - the mapping from local to global indexing 122807b52d57SBarry Smith 122907b52d57SBarry Smith Output Parameter: 123007b52d57SBarry Smith + nproc - number of processors that are connected to this one 123107b52d57SBarry Smith . proc - neighboring processors 123207b52d57SBarry Smith . numproc - number of indices for each processor 123307b52d57SBarry Smith - indices - indices of local nodes shared with neighbor (sorted by global numbering) 123407b52d57SBarry Smith 123507b52d57SBarry Smith Level: advanced 123607b52d57SBarry Smith 123707b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(), 123807b52d57SBarry Smith ISLocalToGlobalMappingGetInfo() 123907b52d57SBarry Smith @*/ 12407087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[]) 124107b52d57SBarry Smith { 12426849ba73SBarry Smith PetscErrorCode ierr; 124307b52d57SBarry Smith 124407b52d57SBarry Smith PetscFunctionBegin; 12456a818285SBarry Smith ierr = ISLocalToGlobalMappingRestoreBlockInfo(mapping,nproc,procs,numprocs,indices);CHKERRQ(ierr); 124607b52d57SBarry Smith PetscFunctionReturn(0); 124707b52d57SBarry Smith } 124886994e45SJed Brown 124986994e45SJed Brown #undef __FUNCT__ 125086994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingGetIndices" 125186994e45SJed Brown /*@C 1252107e9a97SBarry Smith ISLocalToGlobalMappingGetIndices - Get global indices for every local point that is mapped 125386994e45SJed Brown 125486994e45SJed Brown Not Collective 125586994e45SJed Brown 125686994e45SJed Brown Input Arguments: 125786994e45SJed Brown . ltog - local to global mapping 125886994e45SJed Brown 125986994e45SJed Brown Output Arguments: 1260565245c5SBarry Smith . array - array of indices, the length of this array may be obtained with ISLocalToGlobalMappingGetSize() 126186994e45SJed Brown 126286994e45SJed Brown Level: advanced 126386994e45SJed Brown 1264107e9a97SBarry Smith Notes: ISLocalToGlobalMappingGetSize() returns the length the this array 1265107e9a97SBarry Smith 1266107e9a97SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreIndices(), ISLocalToGlobalMappingGetBlockIndices(), ISLocalToGlobalMappingRestoreBlockIndices() 126786994e45SJed Brown @*/ 12687087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 126986994e45SJed Brown { 127086994e45SJed Brown PetscFunctionBegin; 127186994e45SJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 127286994e45SJed Brown PetscValidPointer(array,2); 127345b6f7e9SBarry Smith if (ltog->bs == 1) { 127486994e45SJed Brown *array = ltog->indices; 127545b6f7e9SBarry Smith } else { 127645b6f7e9SBarry Smith PetscInt *jj,k,i,j,n = ltog->n, bs = ltog->bs; 127745b6f7e9SBarry Smith const PetscInt *ii; 127845b6f7e9SBarry Smith PetscErrorCode ierr; 127945b6f7e9SBarry Smith 128045b6f7e9SBarry Smith ierr = PetscMalloc1(bs*n,&jj);CHKERRQ(ierr); 128145b6f7e9SBarry Smith *array = jj; 128245b6f7e9SBarry Smith k = 0; 128345b6f7e9SBarry Smith ii = ltog->indices; 128445b6f7e9SBarry Smith for (i=0; i<n; i++) 128545b6f7e9SBarry Smith for (j=0; j<bs; j++) 128645b6f7e9SBarry Smith jj[k++] = bs*ii[i] + j; 128745b6f7e9SBarry Smith } 128886994e45SJed Brown PetscFunctionReturn(0); 128986994e45SJed Brown } 129086994e45SJed Brown 129186994e45SJed Brown #undef __FUNCT__ 129286994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingRestoreIndices" 129386994e45SJed Brown /*@C 129486994e45SJed Brown ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with ISLocalToGlobalMappingRestoreIndices() 129586994e45SJed Brown 129686994e45SJed Brown Not Collective 129786994e45SJed Brown 129886994e45SJed Brown Input Arguments: 129986994e45SJed Brown + ltog - local to global mapping 130086994e45SJed Brown - array - array of indices 130186994e45SJed Brown 130286994e45SJed Brown Level: advanced 130386994e45SJed Brown 130486994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices() 130586994e45SJed Brown @*/ 13067087cfbeSBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 130786994e45SJed Brown { 130886994e45SJed Brown PetscFunctionBegin; 130986994e45SJed Brown PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 131086994e45SJed Brown PetscValidPointer(array,2); 131145b6f7e9SBarry Smith if (ltog->bs == 1 && *array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer"); 131245b6f7e9SBarry Smith 131345b6f7e9SBarry Smith if (ltog->bs > 1) { 131445b6f7e9SBarry Smith PetscErrorCode ierr; 131545b6f7e9SBarry Smith ierr = PetscFree(*(void**)array);CHKERRQ(ierr); 131645b6f7e9SBarry Smith } 131745b6f7e9SBarry Smith PetscFunctionReturn(0); 131845b6f7e9SBarry Smith } 131945b6f7e9SBarry Smith 132045b6f7e9SBarry Smith #undef __FUNCT__ 132145b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetBlockIndices" 132245b6f7e9SBarry Smith /*@C 132345b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockIndices - Get global indices for every local block 132445b6f7e9SBarry Smith 132545b6f7e9SBarry Smith Not Collective 132645b6f7e9SBarry Smith 132745b6f7e9SBarry Smith Input Arguments: 132845b6f7e9SBarry Smith . ltog - local to global mapping 132945b6f7e9SBarry Smith 133045b6f7e9SBarry Smith Output Arguments: 133145b6f7e9SBarry Smith . array - array of indices 133245b6f7e9SBarry Smith 133345b6f7e9SBarry Smith Level: advanced 133445b6f7e9SBarry Smith 133545b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreBlockIndices() 133645b6f7e9SBarry Smith @*/ 133745b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 133845b6f7e9SBarry Smith { 133945b6f7e9SBarry Smith PetscFunctionBegin; 134045b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 134145b6f7e9SBarry Smith PetscValidPointer(array,2); 134245b6f7e9SBarry Smith *array = ltog->indices; 134345b6f7e9SBarry Smith PetscFunctionReturn(0); 134445b6f7e9SBarry Smith } 134545b6f7e9SBarry Smith 134645b6f7e9SBarry Smith #undef __FUNCT__ 134745b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingRestoreBlockIndices" 134845b6f7e9SBarry Smith /*@C 134945b6f7e9SBarry Smith ISLocalToGlobalMappingRestoreBlockIndices - Restore indices obtained with ISLocalToGlobalMappingGetBlockIndices() 135045b6f7e9SBarry Smith 135145b6f7e9SBarry Smith Not Collective 135245b6f7e9SBarry Smith 135345b6f7e9SBarry Smith Input Arguments: 135445b6f7e9SBarry Smith + ltog - local to global mapping 135545b6f7e9SBarry Smith - array - array of indices 135645b6f7e9SBarry Smith 135745b6f7e9SBarry Smith Level: advanced 135845b6f7e9SBarry Smith 135945b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices() 136045b6f7e9SBarry Smith @*/ 136145b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array) 136245b6f7e9SBarry Smith { 136345b6f7e9SBarry Smith PetscFunctionBegin; 136445b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1); 136545b6f7e9SBarry Smith PetscValidPointer(array,2); 136686994e45SJed Brown if (*array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer"); 13670298fd71SBarry Smith *array = NULL; 136886994e45SJed Brown PetscFunctionReturn(0); 136986994e45SJed Brown } 1370f7efa3c7SJed Brown 1371f7efa3c7SJed Brown #undef __FUNCT__ 1372f7efa3c7SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingConcatenate" 1373f7efa3c7SJed Brown /*@C 1374f7efa3c7SJed Brown ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings 1375f7efa3c7SJed Brown 1376f7efa3c7SJed Brown Not Collective 1377f7efa3c7SJed Brown 1378f7efa3c7SJed Brown Input Arguments: 1379f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate 1380f7efa3c7SJed Brown . n - number of mappings to concatenate 1381f7efa3c7SJed Brown - ltogs - local to global mappings 1382f7efa3c7SJed Brown 1383f7efa3c7SJed Brown Output Arguments: 1384f7efa3c7SJed Brown . ltogcat - new mapping 1385f7efa3c7SJed Brown 13869d90f715SBarry Smith Note: this currently always returns a mapping with block size of 1 13879d90f715SBarry Smith 13889d90f715SBarry Smith Developer Note: If all the input mapping have the same block size we could easily handle that as a special case 13899d90f715SBarry Smith 1390f7efa3c7SJed Brown Level: advanced 1391f7efa3c7SJed Brown 1392f7efa3c7SJed Brown .seealso: ISLocalToGlobalMappingCreate() 1393f7efa3c7SJed Brown @*/ 1394f7efa3c7SJed Brown PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm,PetscInt n,const ISLocalToGlobalMapping ltogs[],ISLocalToGlobalMapping *ltogcat) 1395f7efa3c7SJed Brown { 1396f7efa3c7SJed Brown PetscInt i,cnt,m,*idx; 1397f7efa3c7SJed Brown PetscErrorCode ierr; 1398f7efa3c7SJed Brown 1399f7efa3c7SJed Brown PetscFunctionBegin; 1400f7efa3c7SJed Brown if (n < 0) SETERRQ1(comm,PETSC_ERR_ARG_OUTOFRANGE,"Must have a non-negative number of mappings, given %D",n); 1401f7efa3c7SJed Brown if (n > 0) PetscValidPointer(ltogs,3); 1402f7efa3c7SJed Brown for (i=0; i<n; i++) PetscValidHeaderSpecific(ltogs[i],IS_LTOGM_CLASSID,3); 1403f7efa3c7SJed Brown PetscValidPointer(ltogcat,4); 1404f7efa3c7SJed Brown for (cnt=0,i=0; i<n; i++) { 1405f7efa3c7SJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 1406f7efa3c7SJed Brown cnt += m; 1407f7efa3c7SJed Brown } 1408785e854fSJed Brown ierr = PetscMalloc1(cnt,&idx);CHKERRQ(ierr); 1409f7efa3c7SJed Brown for (cnt=0,i=0; i<n; i++) { 1410f7efa3c7SJed Brown const PetscInt *subidx; 1411f7efa3c7SJed Brown ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr); 1412f7efa3c7SJed Brown ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr); 1413f7efa3c7SJed Brown ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr); 1414f7efa3c7SJed Brown ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr); 1415f7efa3c7SJed Brown cnt += m; 1416f7efa3c7SJed Brown } 1417f0413b6fSBarry Smith ierr = ISLocalToGlobalMappingCreate(comm,1,cnt,idx,PETSC_OWN_POINTER,ltogcat);CHKERRQ(ierr); 1418f7efa3c7SJed Brown PetscFunctionReturn(0); 1419f7efa3c7SJed Brown } 142004a59952SBarry Smith 142104a59952SBarry Smith 1422