xref: /petsc/src/vec/is/utils/isltog.c (revision e24637ba5b3956ffe1679a27e8ad0c9a8b2865c1)
12362add9SBarry Smith 
2b45d2f2cSJed Brown #include <petsc-private/isimpl.h>    /*I "petscis.h"  I*/
30c312b8eSJed Brown #include <petscsf.h>
4665c2dedSJed Brown #include <petscviewer.h>
52362add9SBarry Smith 
67087cfbeSBarry Smith PetscClassId IS_LTOGM_CLASSID;
78e58c17dSMatthew Knepley 
804a59952SBarry Smith 
94a2ae208SSatish Balay #undef __FUNCT__
10743c9b42SStefano Zampini #define __FUNCT__ "ISG2LMapApply"
11186d4ecdSBarry Smith PetscErrorCode ISG2LMapApply(ISLocalToGlobalMapping mapping,PetscInt n,const PetscInt in[],PetscInt out[])
12186d4ecdSBarry Smith {
13186d4ecdSBarry Smith   PetscErrorCode ierr;
14743c9b42SStefano Zampini   PetscInt       i,start,end;
15186d4ecdSBarry Smith 
16186d4ecdSBarry Smith   PetscFunctionBegin;
17186d4ecdSBarry Smith   if (!mapping->globals) {
18186d4ecdSBarry Smith     ierr = ISGlobalToLocalMappingApply(mapping,IS_GTOLM_MASK,0,0,0,0);CHKERRQ(ierr);
19186d4ecdSBarry Smith   }
20743c9b42SStefano Zampini   start = mapping->globalstart;
21743c9b42SStefano Zampini   end = mapping->globalend;
22186d4ecdSBarry Smith   for (i=0; i<n; i++) {
23186d4ecdSBarry Smith     if (in[i] < 0)          out[i] = in[i];
24186d4ecdSBarry Smith     else if (in[i] < start) out[i] = -1;
25186d4ecdSBarry Smith     else if (in[i] > end)   out[i] = -1;
26743c9b42SStefano Zampini     else                    out[i] = mapping->globals[in[i] - start];
27186d4ecdSBarry Smith   }
28186d4ecdSBarry Smith   PetscFunctionReturn(0);
29186d4ecdSBarry Smith }
30186d4ecdSBarry Smith 
31186d4ecdSBarry Smith 
32186d4ecdSBarry Smith #undef __FUNCT__
334a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetSize"
34565245c5SBarry Smith /*@
35107e9a97SBarry Smith     ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping
363b9aefa3SBarry Smith 
373b9aefa3SBarry Smith     Not Collective
383b9aefa3SBarry Smith 
393b9aefa3SBarry Smith     Input Parameter:
403b9aefa3SBarry Smith .   ltog - local to global mapping
413b9aefa3SBarry Smith 
423b9aefa3SBarry Smith     Output Parameter:
43107e9a97SBarry Smith .   n - the number of entries in the local mapping, ISLocalToGlobalMappingGetIndices() returns an array of this length
443b9aefa3SBarry Smith 
453b9aefa3SBarry Smith     Level: advanced
463b9aefa3SBarry Smith 
47273d9f13SBarry Smith     Concepts: mapping^local to global
483b9aefa3SBarry Smith 
493b9aefa3SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
503b9aefa3SBarry Smith @*/
517087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping,PetscInt *n)
523b9aefa3SBarry Smith {
533b9aefa3SBarry Smith   PetscFunctionBegin;
540700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
554482741eSBarry Smith   PetscValidIntPointer(n,2);
56107e9a97SBarry Smith   *n = mapping->bs*mapping->n;
573b9aefa3SBarry Smith   PetscFunctionReturn(0);
583b9aefa3SBarry Smith }
593b9aefa3SBarry Smith 
604a2ae208SSatish Balay #undef __FUNCT__
614a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingView"
625a5d4f66SBarry Smith /*@C
635a5d4f66SBarry Smith     ISLocalToGlobalMappingView - View a local to global mapping
645a5d4f66SBarry Smith 
65b9cd556bSLois Curfman McInnes     Not Collective
66b9cd556bSLois Curfman McInnes 
675a5d4f66SBarry Smith     Input Parameters:
683b9aefa3SBarry Smith +   ltog - local to global mapping
693b9aefa3SBarry Smith -   viewer - viewer
705a5d4f66SBarry Smith 
71a997ad1aSLois Curfman McInnes     Level: advanced
72a997ad1aSLois Curfman McInnes 
73273d9f13SBarry Smith     Concepts: mapping^local to global
745a5d4f66SBarry Smith 
755a5d4f66SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
765a5d4f66SBarry Smith @*/
777087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping,PetscViewer viewer)
785a5d4f66SBarry Smith {
7932dcc486SBarry Smith   PetscInt       i;
8032dcc486SBarry Smith   PetscMPIInt    rank;
81ace3abfcSBarry Smith   PetscBool      iascii;
826849ba73SBarry Smith   PetscErrorCode ierr;
835a5d4f66SBarry Smith 
845a5d4f66SBarry Smith   PetscFunctionBegin;
850700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
863050cee2SBarry Smith   if (!viewer) {
87ce94432eSBarry Smith     ierr = PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)mapping),&viewer);CHKERRQ(ierr);
883050cee2SBarry Smith   }
890700a824SBarry Smith   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
905a5d4f66SBarry Smith 
91ce94432eSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mapping),&rank);CHKERRQ(ierr);
92251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
9332077d6dSBarry Smith   if (iascii) {
9498c3331eSBarry Smith     ierr = PetscObjectPrintClassNamePrefixType((PetscObject)mapping,viewer);CHKERRQ(ierr);
957b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr);
965a5d4f66SBarry Smith     for (i=0; i<mapping->n; i++) {
977904a332SBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %D %D\n",rank,i,mapping->indices[i]);CHKERRQ(ierr);
986831982aSBarry Smith     }
99b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1007b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr);
1017b23a99aSBarry Smith   } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Viewer type %s not supported for ISLocalToGlobalMapping",((PetscObject)viewer)->type_name);
1025a5d4f66SBarry Smith   PetscFunctionReturn(0);
1035a5d4f66SBarry Smith }
1045a5d4f66SBarry Smith 
1054a2ae208SSatish Balay #undef __FUNCT__
1064a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreateIS"
1071f428162SBarry Smith /*@
1082bdab257SBarry Smith     ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n)
1092bdab257SBarry Smith     ordering and a global parallel ordering.
1102bdab257SBarry Smith 
1110f5bd95cSBarry Smith     Not collective
112b9cd556bSLois Curfman McInnes 
113a997ad1aSLois Curfman McInnes     Input Parameter:
1148c03b21aSDmitry Karpeev .   is - index set containing the global numbers for each local number
1152bdab257SBarry Smith 
116a997ad1aSLois Curfman McInnes     Output Parameter:
1172bdab257SBarry Smith .   mapping - new mapping data structure
1182bdab257SBarry Smith 
119f0413b6fSBarry Smith     Notes: the block size of the IS determines the block size of the mapping
120a997ad1aSLois Curfman McInnes     Level: advanced
121a997ad1aSLois Curfman McInnes 
122273d9f13SBarry Smith     Concepts: mapping^local to global
1232bdab257SBarry Smith 
1242bdab257SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
1252bdab257SBarry Smith @*/
1267087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreateIS(IS is,ISLocalToGlobalMapping *mapping)
1272bdab257SBarry Smith {
1286849ba73SBarry Smith   PetscErrorCode ierr;
1293bbf0e92SBarry Smith   PetscInt       n,bs;
1305d0c19d7SBarry Smith   const PetscInt *indices;
1312bdab257SBarry Smith   MPI_Comm       comm;
1323bbf0e92SBarry Smith   PetscBool      isblock;
1333a40ed3dSBarry Smith 
1343a40ed3dSBarry Smith   PetscFunctionBegin;
1350700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,1);
1364482741eSBarry Smith   PetscValidPointer(mapping,2);
1372bdab257SBarry Smith 
1382bdab257SBarry Smith   ierr = PetscObjectGetComm((PetscObject)is,&comm);CHKERRQ(ierr);
1393b9aefa3SBarry Smith   ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr);
1403bbf0e92SBarry Smith   ierr = PetscObjectTypeCompare((PetscObject)is,ISBLOCK,&isblock);CHKERRQ(ierr);
1413bbf0e92SBarry Smith   ierr = ISGetBlockSize(is,&bs);CHKERRQ(ierr);
142f0413b6fSBarry Smith   /*  if (!isblock) { */
143f0413b6fSBarry Smith     ierr = ISGetIndices(is,&indices);CHKERRQ(ierr);
144f0413b6fSBarry Smith     ierr = ISLocalToGlobalMappingCreate(comm,1,n,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr);
1452bdab257SBarry Smith     ierr = ISRestoreIndices(is,&indices);CHKERRQ(ierr);
146f0413b6fSBarry Smith     /*  } else {
147f0413b6fSBarry Smith     ierr = ISBlockGetIndices(is,&indices);CHKERRQ(ierr);
148f0413b6fSBarry Smith     ierr = ISLocalToGlobalMappingCreate(comm,bs,n,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr);
149f0413b6fSBarry Smith     ierr = ISBlockRestoreIndices(is,&indices);CHKERRQ(ierr);
150f0413b6fSBarry Smith      }*/
1513a40ed3dSBarry Smith   PetscFunctionReturn(0);
1522bdab257SBarry Smith }
1535a5d4f66SBarry Smith 
154a4d96a55SJed Brown #undef __FUNCT__
155a4d96a55SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingCreateSF"
156a4d96a55SJed Brown /*@C
157a4d96a55SJed Brown     ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n)
158a4d96a55SJed Brown     ordering and a global parallel ordering.
159a4d96a55SJed Brown 
160a4d96a55SJed Brown     Collective
161a4d96a55SJed Brown 
162a4d96a55SJed Brown     Input Parameter:
163a4d96a55SJed Brown +   sf - star forest mapping contiguous local indices to (rank, offset)
164a4d96a55SJed Brown -   start - first global index on this process
165a4d96a55SJed Brown 
166a4d96a55SJed Brown     Output Parameter:
167a4d96a55SJed Brown .   mapping - new mapping data structure
168a4d96a55SJed Brown 
169a4d96a55SJed Brown     Level: advanced
170a4d96a55SJed Brown 
171a4d96a55SJed Brown     Concepts: mapping^local to global
172a4d96a55SJed Brown 
173a4d96a55SJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS()
174a4d96a55SJed Brown @*/
175a4d96a55SJed Brown PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf,PetscInt start,ISLocalToGlobalMapping *mapping)
176a4d96a55SJed Brown {
177a4d96a55SJed Brown   PetscErrorCode ierr;
178a4d96a55SJed Brown   PetscInt       i,maxlocal,nroots,nleaves,*globals,*ltog;
179a4d96a55SJed Brown   const PetscInt *ilocal;
180a4d96a55SJed Brown   MPI_Comm       comm;
181a4d96a55SJed Brown 
182a4d96a55SJed Brown   PetscFunctionBegin;
183a4d96a55SJed Brown   PetscValidHeaderSpecific(sf,PETSCSF_CLASSID,1);
184a4d96a55SJed Brown   PetscValidPointer(mapping,3);
185a4d96a55SJed Brown 
186a4d96a55SJed Brown   ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr);
1870298fd71SBarry Smith   ierr = PetscSFGetGraph(sf,&nroots,&nleaves,&ilocal,NULL);CHKERRQ(ierr);
188f6e5521dSKarl Rupp   if (ilocal) {
189f6e5521dSKarl Rupp     for (i=0,maxlocal=0; i<nleaves; i++) maxlocal = PetscMax(maxlocal,ilocal[i]+1);
190f6e5521dSKarl Rupp   }
191a4d96a55SJed Brown   else maxlocal = nleaves;
192785e854fSJed Brown   ierr = PetscMalloc1(nroots,&globals);CHKERRQ(ierr);
193785e854fSJed Brown   ierr = PetscMalloc1(maxlocal,&ltog);CHKERRQ(ierr);
194a4d96a55SJed Brown   for (i=0; i<nroots; i++) globals[i] = start + i;
195a4d96a55SJed Brown   for (i=0; i<maxlocal; i++) ltog[i] = -1;
196a4d96a55SJed Brown   ierr = PetscSFBcastBegin(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
197a4d96a55SJed Brown   ierr = PetscSFBcastEnd(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
198f0413b6fSBarry Smith   ierr = ISLocalToGlobalMappingCreate(comm,1,maxlocal,ltog,PETSC_OWN_POINTER,mapping);CHKERRQ(ierr);
199a4d96a55SJed Brown   ierr = PetscFree(globals);CHKERRQ(ierr);
200a4d96a55SJed Brown   PetscFunctionReturn(0);
201a4d96a55SJed Brown }
202b46b645bSBarry Smith 
2034a2ae208SSatish Balay #undef __FUNCT__
20445b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetBlockSize"
20545b6f7e9SBarry Smith /*@
20645b6f7e9SBarry Smith     ISLocalToGlobalMappingGetBlockSize - Gets the blocksize of the mapping
20745b6f7e9SBarry Smith     ordering and a global parallel ordering.
20845b6f7e9SBarry Smith 
20945b6f7e9SBarry Smith     Not Collective
21045b6f7e9SBarry Smith 
21145b6f7e9SBarry Smith     Input Parameters:
21245b6f7e9SBarry Smith .   mapping - mapping data structure
21345b6f7e9SBarry Smith 
21445b6f7e9SBarry Smith     Output Parameter:
21545b6f7e9SBarry Smith .   bs - the blocksize
21645b6f7e9SBarry Smith 
21745b6f7e9SBarry Smith     Level: advanced
21845b6f7e9SBarry Smith 
21945b6f7e9SBarry Smith     Concepts: mapping^local to global
22045b6f7e9SBarry Smith 
22145b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS()
22245b6f7e9SBarry Smith @*/
22345b6f7e9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetBlockSize(ISLocalToGlobalMapping mapping,PetscInt *bs)
22445b6f7e9SBarry Smith {
22545b6f7e9SBarry Smith   PetscFunctionBegin;
22645b6f7e9SBarry Smith   *bs = mapping->bs;
22745b6f7e9SBarry Smith   PetscFunctionReturn(0);
22845b6f7e9SBarry Smith }
22945b6f7e9SBarry Smith 
23045b6f7e9SBarry Smith #undef __FUNCT__
2314a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreate"
232ba5bb76aSSatish Balay /*@
23390f02eecSBarry Smith     ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n)
23490f02eecSBarry Smith     ordering and a global parallel ordering.
2352362add9SBarry Smith 
23689d82c54SBarry Smith     Not Collective, but communicator may have more than one process
237b9cd556bSLois Curfman McInnes 
2382362add9SBarry Smith     Input Parameters:
23989d82c54SBarry Smith +   comm - MPI communicator
240f0413b6fSBarry Smith .   bs - the block size
24190f02eecSBarry Smith .   n - the number of local elements
242f0413b6fSBarry Smith .   indices - the global index for each local element, these do not need to be in increasing order (sorted), these values should not be scaled by the blocksize bs
243d5ad8652SBarry Smith -   mode - see PetscCopyMode
2442362add9SBarry Smith 
245a997ad1aSLois Curfman McInnes     Output Parameter:
24690f02eecSBarry Smith .   mapping - new mapping data structure
2472362add9SBarry Smith 
248f0413b6fSBarry Smith     Notes: There is one integer value in indices per block and it represents the actual indices bs*idx + j, where j=0,..,bs-1
249a997ad1aSLois Curfman McInnes     Level: advanced
250a997ad1aSLois Curfman McInnes 
251273d9f13SBarry Smith     Concepts: mapping^local to global
2522362add9SBarry Smith 
253d5ad8652SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS()
2542362add9SBarry Smith @*/
255f0413b6fSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreate(MPI_Comm cm,PetscInt bs,PetscInt n,const PetscInt indices[],PetscCopyMode mode,ISLocalToGlobalMapping *mapping)
2562362add9SBarry Smith {
2576849ba73SBarry Smith   PetscErrorCode ierr;
25832dcc486SBarry Smith   PetscInt       *in;
259b46b645bSBarry Smith 
260b46b645bSBarry Smith   PetscFunctionBegin;
26173911063SBarry Smith   if (n) PetscValidIntPointer(indices,3);
2624482741eSBarry Smith   PetscValidPointer(mapping,4);
263b46b645bSBarry Smith 
2640298fd71SBarry Smith   *mapping = NULL;
265607a6623SBarry Smith   ierr = ISInitializePackage();CHKERRQ(ierr);
2662362add9SBarry Smith 
26767c2884eSBarry Smith   ierr = PetscHeaderCreate(*mapping,_p_ISLocalToGlobalMapping,int,IS_LTOGM_CLASSID,"ISLocalToGlobalMapping","Local to global mapping","IS",
26852e6d16bSBarry Smith                            cm,ISLocalToGlobalMappingDestroy,ISLocalToGlobalMappingView);CHKERRQ(ierr);
269d4bb536fSBarry Smith   (*mapping)->n  = n;
270f0413b6fSBarry Smith   (*mapping)->bs = bs;
271d4bb536fSBarry Smith   /*
272d4bb536fSBarry Smith     Do not create the global to local mapping. This is only created if
273d4bb536fSBarry Smith     ISGlobalToLocalMapping() is called
274d4bb536fSBarry Smith   */
275d4bb536fSBarry Smith   (*mapping)->globals = 0;
276d5ad8652SBarry Smith   if (mode == PETSC_COPY_VALUES) {
277785e854fSJed Brown     ierr = PetscMalloc1(n,&in);CHKERRQ(ierr);
278d5ad8652SBarry Smith     ierr = PetscMemcpy(in,indices,n*sizeof(PetscInt));CHKERRQ(ierr);
279d5ad8652SBarry Smith     (*mapping)->indices = in;
2806389a1a1SBarry Smith     ierr = PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt));CHKERRQ(ierr);
2816389a1a1SBarry Smith   } else if (mode == PETSC_OWN_POINTER) {
2826389a1a1SBarry Smith     (*mapping)->indices = (PetscInt*)indices;
2836389a1a1SBarry Smith     ierr = PetscLogObjectMemory((PetscObject)*mapping,n*sizeof(PetscInt));CHKERRQ(ierr);
2846389a1a1SBarry Smith   }
285f6e5521dSKarl Rupp   else SETERRQ(cm,PETSC_ERR_SUP,"Cannot currently use PETSC_USE_POINTER");
2863a40ed3dSBarry Smith   PetscFunctionReturn(0);
2872362add9SBarry Smith }
2882362add9SBarry Smith 
2894a2ae208SSatish Balay #undef __FUNCT__
2904a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingDestroy"
29190f02eecSBarry Smith /*@
29290f02eecSBarry Smith    ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n)
29390f02eecSBarry Smith    ordering and a global parallel ordering.
29490f02eecSBarry Smith 
2950f5bd95cSBarry Smith    Note Collective
296b9cd556bSLois Curfman McInnes 
29790f02eecSBarry Smith    Input Parameters:
29890f02eecSBarry Smith .  mapping - mapping data structure
29990f02eecSBarry Smith 
300a997ad1aSLois Curfman McInnes    Level: advanced
301a997ad1aSLois Curfman McInnes 
3023acfe500SLois Curfman McInnes .seealso: ISLocalToGlobalMappingCreate()
30390f02eecSBarry Smith @*/
3046bf464f9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping)
30590f02eecSBarry Smith {
306dfbe8321SBarry Smith   PetscErrorCode ierr;
3075fd66863SKarl Rupp 
3083a40ed3dSBarry Smith   PetscFunctionBegin;
3096bf464f9SBarry Smith   if (!*mapping) PetscFunctionReturn(0);
3106bf464f9SBarry Smith   PetscValidHeaderSpecific((*mapping),IS_LTOGM_CLASSID,1);
311997056adSBarry Smith   if (--((PetscObject)(*mapping))->refct > 0) {*mapping = 0;PetscFunctionReturn(0);}
3126bf464f9SBarry Smith   ierr     = PetscFree((*mapping)->indices);CHKERRQ(ierr);
3136bf464f9SBarry Smith   ierr     = PetscFree((*mapping)->globals);CHKERRQ(ierr);
314d38fa0fbSBarry Smith   ierr     = PetscHeaderDestroy(mapping);CHKERRQ(ierr);
315992144d0SBarry Smith   *mapping = 0;
3163a40ed3dSBarry Smith   PetscFunctionReturn(0);
31790f02eecSBarry Smith }
31890f02eecSBarry Smith 
3194a2ae208SSatish Balay #undef __FUNCT__
3204a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingApplyIS"
32190f02eecSBarry Smith /*@
3223acfe500SLois Curfman McInnes     ISLocalToGlobalMappingApplyIS - Creates from an IS in the local numbering
3233acfe500SLois Curfman McInnes     a new index set using the global numbering defined in an ISLocalToGlobalMapping
3243acfe500SLois Curfman McInnes     context.
32590f02eecSBarry Smith 
326b9cd556bSLois Curfman McInnes     Not collective
327b9cd556bSLois Curfman McInnes 
32890f02eecSBarry Smith     Input Parameters:
329b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
330b9cd556bSLois Curfman McInnes -   is - index set in local numbering
33190f02eecSBarry Smith 
33290f02eecSBarry Smith     Output Parameters:
33390f02eecSBarry Smith .   newis - index set in global numbering
33490f02eecSBarry Smith 
335a997ad1aSLois Curfman McInnes     Level: advanced
336a997ad1aSLois Curfman McInnes 
337273d9f13SBarry Smith     Concepts: mapping^local to global
3383acfe500SLois Curfman McInnes 
33990f02eecSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
340d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy(), ISGlobalToLocalMappingApply()
34190f02eecSBarry Smith @*/
3427087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping,IS is,IS *newis)
34390f02eecSBarry Smith {
3446849ba73SBarry Smith   PetscErrorCode ierr;
345*e24637baSBarry Smith   PetscInt       n,*idxout;
3465d0c19d7SBarry Smith   const PetscInt *idxin;
3473a40ed3dSBarry Smith 
3483a40ed3dSBarry Smith   PetscFunctionBegin;
3490700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
3500700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,2);
3514482741eSBarry Smith   PetscValidPointer(newis,3);
35290f02eecSBarry Smith 
3533b9aefa3SBarry Smith   ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr);
35490f02eecSBarry Smith   ierr = ISGetIndices(is,&idxin);CHKERRQ(ierr);
355785e854fSJed Brown   ierr = PetscMalloc1(n,&idxout);CHKERRQ(ierr);
356*e24637baSBarry Smith   ierr = ISLocalToGlobalMappingApply(mapping,n,idxin,idxout);CHKERRQ(ierr);
3573b9aefa3SBarry Smith   ierr = ISRestoreIndices(is,&idxin);CHKERRQ(ierr);
358543f3098SMatthew G. Knepley   ierr = ISCreateGeneral(PetscObjectComm((PetscObject)is),n,idxout,PETSC_OWN_POINTER,newis);CHKERRQ(ierr);
3593a40ed3dSBarry Smith   PetscFunctionReturn(0);
36090f02eecSBarry Smith }
36190f02eecSBarry Smith 
362afcb2eb5SJed Brown #undef __FUNCT__
363afcb2eb5SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingApply"
364b89cb25eSSatish Balay /*@
3653acfe500SLois Curfman McInnes    ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering
3663acfe500SLois Curfman McInnes    and converts them to the global numbering.
36790f02eecSBarry Smith 
368b9cd556bSLois Curfman McInnes    Not collective
369b9cd556bSLois Curfman McInnes 
370bb25748dSBarry Smith    Input Parameters:
371b9cd556bSLois Curfman McInnes +  mapping - the local to global mapping context
372bb25748dSBarry Smith .  N - number of integers
373b9cd556bSLois Curfman McInnes -  in - input indices in local numbering
374bb25748dSBarry Smith 
375bb25748dSBarry Smith    Output Parameter:
376bb25748dSBarry Smith .  out - indices in global numbering
377bb25748dSBarry Smith 
378b9cd556bSLois Curfman McInnes    Notes:
379b9cd556bSLois Curfman McInnes    The in and out array parameters may be identical.
380d4bb536fSBarry Smith 
381a997ad1aSLois Curfman McInnes    Level: advanced
382a997ad1aSLois Curfman McInnes 
38345b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApplyBlock(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(),
3840752156aSBarry Smith           ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(),
385d4bb536fSBarry Smith           AOPetscToApplication(), ISGlobalToLocalMappingApply()
386bb25748dSBarry Smith 
387273d9f13SBarry Smith     Concepts: mapping^local to global
388afcb2eb5SJed Brown @*/
389afcb2eb5SJed Brown PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[])
390afcb2eb5SJed Brown {
391*e24637baSBarry Smith   PetscInt       i,bs = mapping->bs,Nmax = bs*mapping->n;
39245b6f7e9SBarry Smith   const PetscInt *idx = mapping->indices;
39345b6f7e9SBarry Smith 
39445b6f7e9SBarry Smith   PetscFunctionBegin;
39545b6f7e9SBarry Smith   if (bs == 1) {
39645b6f7e9SBarry Smith     for (i=0; i<N; i++) {
39745b6f7e9SBarry Smith       if (in[i] < 0) {
39845b6f7e9SBarry Smith         out[i] = in[i];
39945b6f7e9SBarry Smith         continue;
40045b6f7e9SBarry Smith       }
401*e24637baSBarry Smith       if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %D too large %D (max) at %D",in[i],Nmax-1,i);
40245b6f7e9SBarry Smith       out[i] = idx[in[i]];
40345b6f7e9SBarry Smith     }
40445b6f7e9SBarry Smith   } else {
40545b6f7e9SBarry Smith     for (i=0; i<N; i++) {
40645b6f7e9SBarry Smith       if (in[i] < 0) {
40745b6f7e9SBarry Smith         out[i] = in[i];
40845b6f7e9SBarry Smith         continue;
40945b6f7e9SBarry Smith       }
410*e24637baSBarry Smith       if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %D too large %D (max) at %D",in[i],Nmax-1,i);
41145b6f7e9SBarry Smith       out[i] = idx[in[i]/bs]*bs + (in[i] % bs);
41245b6f7e9SBarry Smith     }
41345b6f7e9SBarry Smith   }
41445b6f7e9SBarry Smith   PetscFunctionReturn(0);
41545b6f7e9SBarry Smith }
41645b6f7e9SBarry Smith 
41745b6f7e9SBarry Smith #undef __FUNCT__
41845b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingApplyBlock"
41945b6f7e9SBarry Smith /*@
42045b6f7e9SBarry Smith    ISLocalToGlobalMappingApplyBlock - Takes a list of integers in a local numbering  and converts them to the global numbering.
42145b6f7e9SBarry Smith 
42245b6f7e9SBarry Smith    Not collective
42345b6f7e9SBarry Smith 
42445b6f7e9SBarry Smith    Input Parameters:
42545b6f7e9SBarry Smith +  mapping - the local to global mapping context
42645b6f7e9SBarry Smith .  N - number of integers
42745b6f7e9SBarry Smith -  in - input indices in local numbering
42845b6f7e9SBarry Smith 
42945b6f7e9SBarry Smith    Output Parameter:
43045b6f7e9SBarry Smith .  out - indices in global numbering
43145b6f7e9SBarry Smith 
43245b6f7e9SBarry Smith    Notes:
43345b6f7e9SBarry Smith    The in and out array parameters may be identical.
43445b6f7e9SBarry Smith 
43545b6f7e9SBarry Smith    Level: advanced
43645b6f7e9SBarry Smith 
43745b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(),
43845b6f7e9SBarry Smith           ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(),
43945b6f7e9SBarry Smith           AOPetscToApplication(), ISGlobalToLocalMappingApply()
44045b6f7e9SBarry Smith 
44145b6f7e9SBarry Smith     Concepts: mapping^local to global
44245b6f7e9SBarry Smith @*/
44345b6f7e9SBarry Smith PetscErrorCode ISLocalToGlobalMappingApplyBlock(ISLocalToGlobalMapping mapping,PetscInt N,const PetscInt in[],PetscInt out[])
44445b6f7e9SBarry Smith {
445afcb2eb5SJed Brown   PetscInt       i,Nmax = mapping->n;
446afcb2eb5SJed Brown   const PetscInt *idx = mapping->indices;
447d4bb536fSBarry Smith 
448afcb2eb5SJed Brown   PetscFunctionBegin;
449afcb2eb5SJed Brown   for (i=0; i<N; i++) {
450afcb2eb5SJed Brown     if (in[i] < 0) {
451afcb2eb5SJed Brown       out[i] = in[i];
452afcb2eb5SJed Brown       continue;
453afcb2eb5SJed Brown     }
454*e24637baSBarry Smith     if (in[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local block index %D too large %D (max) at %D",in[i],Nmax-1,i);
455afcb2eb5SJed Brown     out[i] = idx[in[i]];
456afcb2eb5SJed Brown   }
457afcb2eb5SJed Brown   PetscFunctionReturn(0);
458afcb2eb5SJed Brown }
459d4bb536fSBarry Smith 
460d4bb536fSBarry Smith /* -----------------------------------------------------------------------------------------*/
461d4bb536fSBarry Smith 
4624a2ae208SSatish Balay #undef __FUNCT__
4634a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingSetUp_Private"
464d4bb536fSBarry Smith /*
465d4bb536fSBarry Smith     Creates the global fields in the ISLocalToGlobalMapping structure
466d4bb536fSBarry Smith */
4676849ba73SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Private(ISLocalToGlobalMapping mapping)
468d4bb536fSBarry Smith {
4696849ba73SBarry Smith   PetscErrorCode ierr;
47032dcc486SBarry Smith   PetscInt       i,*idx = mapping->indices,n = mapping->n,end,start,*globals;
471d4bb536fSBarry Smith 
4723a40ed3dSBarry Smith   PetscFunctionBegin;
473d4bb536fSBarry Smith   end   = 0;
474ec268f7cSJed Brown   start = PETSC_MAX_INT;
475d4bb536fSBarry Smith 
476d4bb536fSBarry Smith   for (i=0; i<n; i++) {
477d4bb536fSBarry Smith     if (idx[i] < 0) continue;
478d4bb536fSBarry Smith     if (idx[i] < start) start = idx[i];
479d4bb536fSBarry Smith     if (idx[i] > end)   end   = idx[i];
480d4bb536fSBarry Smith   }
481d4bb536fSBarry Smith   if (start > end) {start = 0; end = -1;}
482d4bb536fSBarry Smith   mapping->globalstart = start;
483d4bb536fSBarry Smith   mapping->globalend   = end;
484d4bb536fSBarry Smith 
485785e854fSJed Brown   ierr             = PetscMalloc1((end-start+2),&globals);CHKERRQ(ierr);
486b0a32e0cSBarry Smith   mapping->globals = globals;
487f6e5521dSKarl Rupp   for (i=0; i<end-start+1; i++) globals[i] = -1;
488d4bb536fSBarry Smith   for (i=0; i<n; i++) {
489d4bb536fSBarry Smith     if (idx[i] < 0) continue;
490d4bb536fSBarry Smith     globals[idx[i] - start] = i;
491d4bb536fSBarry Smith   }
492d4bb536fSBarry Smith 
4933bb1ff40SBarry Smith   ierr = PetscLogObjectMemory((PetscObject)mapping,(end-start+1)*sizeof(PetscInt));CHKERRQ(ierr);
4943a40ed3dSBarry Smith   PetscFunctionReturn(0);
495d4bb536fSBarry Smith }
496d4bb536fSBarry Smith 
4974a2ae208SSatish Balay #undef __FUNCT__
4984a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingApply"
499d4bb536fSBarry Smith /*@
500a997ad1aSLois Curfman McInnes     ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers
501a997ad1aSLois Curfman McInnes     specified with a global numbering.
502d4bb536fSBarry Smith 
503b9cd556bSLois Curfman McInnes     Not collective
504b9cd556bSLois Curfman McInnes 
505d4bb536fSBarry Smith     Input Parameters:
506b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
507d4bb536fSBarry Smith .   type - IS_GTOLM_MASK - replaces global indices with no local value with -1
508d4bb536fSBarry Smith            IS_GTOLM_DROP - drops the indices with no local value from the output list
509d4bb536fSBarry Smith .   n - number of global indices to map
510b9cd556bSLois Curfman McInnes -   idx - global indices to map
511d4bb536fSBarry Smith 
512d4bb536fSBarry Smith     Output Parameters:
513b9cd556bSLois Curfman McInnes +   nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n)
514b9cd556bSLois Curfman McInnes -   idxout - local index of each global index, one must pass in an array long enough
515e182c471SBarry Smith              to hold all the indices. You can call ISGlobalToLocalMappingApply() with
5160298fd71SBarry Smith              idxout == NULL to determine the required length (returned in nout)
517e182c471SBarry Smith              and then allocate the required space and call ISGlobalToLocalMappingApply()
518e182c471SBarry Smith              a second time to set the values.
519d4bb536fSBarry Smith 
520b9cd556bSLois Curfman McInnes     Notes:
5210298fd71SBarry Smith     Either nout or idxout may be NULL. idx and idxout may be identical.
522d4bb536fSBarry Smith 
5230f5bd95cSBarry Smith     This is not scalable in memory usage. Each processor requires O(Nglobal) size
5240f5bd95cSBarry Smith     array to compute these.
5250f5bd95cSBarry Smith 
526a997ad1aSLois Curfman McInnes     Level: advanced
527a997ad1aSLois Curfman McInnes 
52832fd6b96SBarry Smith     Developer Note: The manual page states that idx and idxout may be identical but the calling
52932fd6b96SBarry Smith        sequence declares idx as const so it cannot be the same as idxout.
53032fd6b96SBarry Smith 
531273d9f13SBarry Smith     Concepts: mapping^global to local
532d4bb536fSBarry Smith 
533d4bb536fSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
534d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy()
535d4bb536fSBarry Smith @*/
5367087cfbeSBarry Smith PetscErrorCode  ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingType type,
53732dcc486SBarry Smith                                   PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[])
538d4bb536fSBarry Smith {
53932dcc486SBarry Smith   PetscInt       i,*globals,nf = 0,tmp,start,end;
5406849ba73SBarry Smith   PetscErrorCode ierr;
541d4bb536fSBarry Smith 
5423a40ed3dSBarry Smith   PetscFunctionBegin;
5430700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
544d4bb536fSBarry Smith   if (!mapping->globals) {
545d4bb536fSBarry Smith     ierr = ISGlobalToLocalMappingSetUp_Private(mapping);CHKERRQ(ierr);
546d4bb536fSBarry Smith   }
547d4bb536fSBarry Smith   globals = mapping->globals;
548d4bb536fSBarry Smith   start   = mapping->globalstart;
549d4bb536fSBarry Smith   end     = mapping->globalend;
550d4bb536fSBarry Smith 
551d4bb536fSBarry Smith   if (type == IS_GTOLM_MASK) {
552d4bb536fSBarry Smith     if (idxout) {
553d4bb536fSBarry Smith       for (i=0; i<n; i++) {
554d4bb536fSBarry Smith         if (idx[i] < 0) idxout[i] = idx[i];
555d4bb536fSBarry Smith         else if (idx[i] < start) idxout[i] = -1;
556d4bb536fSBarry Smith         else if (idx[i] > end)   idxout[i] = -1;
557d4bb536fSBarry Smith         else                     idxout[i] = globals[idx[i] - start];
558d4bb536fSBarry Smith       }
559d4bb536fSBarry Smith     }
560d4bb536fSBarry Smith     if (nout) *nout = n;
561d4bb536fSBarry Smith   } else {
562d4bb536fSBarry Smith     if (idxout) {
563d4bb536fSBarry Smith       for (i=0; i<n; i++) {
564d4bb536fSBarry Smith         if (idx[i] < 0) continue;
565d4bb536fSBarry Smith         if (idx[i] < start) continue;
566d4bb536fSBarry Smith         if (idx[i] > end) continue;
567d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
568d4bb536fSBarry Smith         if (tmp < 0) continue;
569d4bb536fSBarry Smith         idxout[nf++] = tmp;
570d4bb536fSBarry Smith       }
571d4bb536fSBarry Smith     } else {
572d4bb536fSBarry Smith       for (i=0; i<n; i++) {
573d4bb536fSBarry Smith         if (idx[i] < 0) continue;
574d4bb536fSBarry Smith         if (idx[i] < start) continue;
575d4bb536fSBarry Smith         if (idx[i] > end) continue;
576d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
577d4bb536fSBarry Smith         if (tmp < 0) continue;
578d4bb536fSBarry Smith         nf++;
579d4bb536fSBarry Smith       }
580d4bb536fSBarry Smith     }
581d4bb536fSBarry Smith     if (nout) *nout = nf;
582d4bb536fSBarry Smith   }
5833a40ed3dSBarry Smith   PetscFunctionReturn(0);
584d4bb536fSBarry Smith }
58590f02eecSBarry Smith 
5864a2ae208SSatish Balay #undef __FUNCT__
5874a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetInfo"
58889d82c54SBarry Smith /*@C
58989d82c54SBarry Smith     ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each processor and
59089d82c54SBarry Smith      each index shared by more than one processor
59189d82c54SBarry Smith 
59289d82c54SBarry Smith     Collective on ISLocalToGlobalMapping
59389d82c54SBarry Smith 
59489d82c54SBarry Smith     Input Parameters:
59589d82c54SBarry Smith .   mapping - the mapping from local to global indexing
59689d82c54SBarry Smith 
59789d82c54SBarry Smith     Output Parameter:
59889d82c54SBarry Smith +   nproc - number of processors that are connected to this one
59989d82c54SBarry Smith .   proc - neighboring processors
60007b52d57SBarry Smith .   numproc - number of indices for each subdomain (processor)
6013463a7baSJed Brown -   indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering)
60289d82c54SBarry Smith 
60389d82c54SBarry Smith     Level: advanced
60489d82c54SBarry Smith 
605273d9f13SBarry Smith     Concepts: mapping^local to global
60689d82c54SBarry Smith 
6072cfcea29SBarry Smith     Fortran Usage:
6082cfcea29SBarry Smith $        ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by
6092cfcea29SBarry Smith $        ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc],
6102cfcea29SBarry Smith           PetscInt indices[nproc][numprocmax],ierr)
6112cfcea29SBarry Smith         There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and
6122cfcea29SBarry Smith         indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough.
6132cfcea29SBarry Smith 
6142cfcea29SBarry Smith 
61507b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
61607b52d57SBarry Smith           ISLocalToGlobalMappingRestoreInfo()
61789d82c54SBarry Smith @*/
6187087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
61989d82c54SBarry Smith {
6206849ba73SBarry Smith   PetscErrorCode ierr;
62197f1f81fSBarry Smith   PetscMPIInt    size,rank,tag1,tag2,tag3,*len,*source,imdex;
62232dcc486SBarry Smith   PetscInt       i,n = mapping->n,Ng,ng,max = 0,*lindices = mapping->indices;
62332dcc486SBarry Smith   PetscInt       *nprocs,*owner,nsends,*sends,j,*starts,nmax,nrecvs,*recvs,proc;
62497f1f81fSBarry Smith   PetscInt       cnt,scale,*ownedsenders,*nownedsenders,rstart,nowned;
62532dcc486SBarry Smith   PetscInt       node,nownedm,nt,*sends2,nsends2,*starts2,*lens2,*dest,nrecvs2,*starts3,*recvs2,k,*bprocs,*tmp;
62632dcc486SBarry Smith   PetscInt       first_procs,first_numprocs,*first_indices;
62789d82c54SBarry Smith   MPI_Request    *recv_waits,*send_waits;
62830dcb7c9SBarry Smith   MPI_Status     recv_status,*send_status,*recv_statuses;
629ce94432eSBarry Smith   MPI_Comm       comm;
630ace3abfcSBarry Smith   PetscBool      debug = PETSC_FALSE;
63189d82c54SBarry Smith 
63289d82c54SBarry Smith   PetscFunctionBegin;
6330700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
634ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)mapping,&comm);CHKERRQ(ierr);
63524cf384cSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
63624cf384cSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
63724cf384cSBarry Smith   if (size == 1) {
63824cf384cSBarry Smith     *nproc         = 0;
6390298fd71SBarry Smith     *procs         = NULL;
64032dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt),numprocs);CHKERRQ(ierr);
6411e2105dcSBarry Smith     (*numprocs)[0] = 0;
64232dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt*),indices);CHKERRQ(ierr);
6430298fd71SBarry Smith     (*indices)[0]  = NULL;
64424cf384cSBarry Smith     PetscFunctionReturn(0);
64524cf384cSBarry Smith   }
64624cf384cSBarry Smith 
6470298fd71SBarry Smith   ierr = PetscOptionsGetBool(NULL,"-islocaltoglobalmappinggetinfo_debug",&debug,NULL);CHKERRQ(ierr);
64807b52d57SBarry Smith 
6493677ff5aSBarry Smith   /*
6503677ff5aSBarry Smith     Notes on ISLocalToGlobalMappingGetInfo
6513677ff5aSBarry Smith 
6523677ff5aSBarry Smith     globally owned node - the nodes that have been assigned to this processor in global
6533677ff5aSBarry Smith            numbering, just for this routine.
6543677ff5aSBarry Smith 
6553677ff5aSBarry Smith     nontrivial globally owned node - node assigned to this processor that is on a subdomain
6563677ff5aSBarry Smith            boundary (i.e. is has more than one local owner)
6573677ff5aSBarry Smith 
6583677ff5aSBarry Smith     locally owned node - node that exists on this processors subdomain
6593677ff5aSBarry Smith 
6603677ff5aSBarry Smith     nontrivial locally owned node - node that is not in the interior (i.e. has more than one
6613677ff5aSBarry Smith            local subdomain
6623677ff5aSBarry Smith   */
66324cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag1);CHKERRQ(ierr);
66424cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag2);CHKERRQ(ierr);
66524cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag3);CHKERRQ(ierr);
66689d82c54SBarry Smith 
66789d82c54SBarry Smith   for (i=0; i<n; i++) {
66889d82c54SBarry Smith     if (lindices[i] > max) max = lindices[i];
66989d82c54SBarry Smith   }
67032dcc486SBarry Smith   ierr   = MPI_Allreduce(&max,&Ng,1,MPIU_INT,MPI_MAX,comm);CHKERRQ(ierr);
67178058e43SBarry Smith   Ng++;
67289d82c54SBarry Smith   ierr   = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
67389d82c54SBarry Smith   ierr   = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
674bc8ff85bSBarry Smith   scale  = Ng/size + 1;
675a2e34c3dSBarry Smith   ng     = scale; if (rank == size-1) ng = Ng - scale*(size-1); ng = PetscMax(1,ng);
676caba0dd0SBarry Smith   rstart = scale*rank;
67789d82c54SBarry Smith 
67889d82c54SBarry Smith   /* determine ownership ranges of global indices */
679785e854fSJed Brown   ierr = PetscMalloc1(2*size,&nprocs);CHKERRQ(ierr);
68032dcc486SBarry Smith   ierr = PetscMemzero(nprocs,2*size*sizeof(PetscInt));CHKERRQ(ierr);
68189d82c54SBarry Smith 
68289d82c54SBarry Smith   /* determine owners of each local node  */
683785e854fSJed Brown   ierr = PetscMalloc1(n,&owner);CHKERRQ(ierr);
68489d82c54SBarry Smith   for (i=0; i<n; i++) {
6853677ff5aSBarry Smith     proc             = lindices[i]/scale; /* processor that globally owns this index */
68627c402fcSBarry Smith     nprocs[2*proc+1] = 1;                 /* processor globally owns at least one of ours */
6873677ff5aSBarry Smith     owner[i]         = proc;
68827c402fcSBarry Smith     nprocs[2*proc]++;                     /* count of how many that processor globally owns of ours */
68989d82c54SBarry Smith   }
69027c402fcSBarry Smith   nsends = 0; for (i=0; i<size; i++) nsends += nprocs[2*i+1];
6917904a332SBarry Smith   ierr = PetscInfo1(mapping,"Number of global owners for my local data %D\n",nsends);CHKERRQ(ierr);
69289d82c54SBarry Smith 
69389d82c54SBarry Smith   /* inform other processors of number of messages and max length*/
69427c402fcSBarry Smith   ierr = PetscMaxSum(comm,nprocs,&nmax,&nrecvs);CHKERRQ(ierr);
6957904a332SBarry Smith   ierr = PetscInfo1(mapping,"Number of local owners for my global data %D\n",nrecvs);CHKERRQ(ierr);
69689d82c54SBarry Smith 
69789d82c54SBarry Smith   /* post receives for owned rows */
698785e854fSJed Brown   ierr = PetscMalloc1((2*nrecvs+1)*(nmax+1),&recvs);CHKERRQ(ierr);
699785e854fSJed Brown   ierr = PetscMalloc1((nrecvs+1),&recv_waits);CHKERRQ(ierr);
70089d82c54SBarry Smith   for (i=0; i<nrecvs; i++) {
70132dcc486SBarry Smith     ierr = MPI_Irecv(recvs+2*nmax*i,2*nmax,MPIU_INT,MPI_ANY_SOURCE,tag1,comm,recv_waits+i);CHKERRQ(ierr);
70289d82c54SBarry Smith   }
70389d82c54SBarry Smith 
70489d82c54SBarry Smith   /* pack messages containing lists of local nodes to owners */
705785e854fSJed Brown   ierr      = PetscMalloc1((2*n+1),&sends);CHKERRQ(ierr);
706785e854fSJed Brown   ierr      = PetscMalloc1((size+1),&starts);CHKERRQ(ierr);
70789d82c54SBarry Smith   starts[0] = 0;
708f6e5521dSKarl Rupp   for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2];
70989d82c54SBarry Smith   for (i=0; i<n; i++) {
71089d82c54SBarry Smith     sends[starts[owner[i]]++] = lindices[i];
71130dcb7c9SBarry Smith     sends[starts[owner[i]]++] = i;
71289d82c54SBarry Smith   }
71389d82c54SBarry Smith   ierr = PetscFree(owner);CHKERRQ(ierr);
71489d82c54SBarry Smith   starts[0] = 0;
715f6e5521dSKarl Rupp   for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2];
71689d82c54SBarry Smith 
71789d82c54SBarry Smith   /* send the messages */
718785e854fSJed Brown   ierr = PetscMalloc1((nsends+1),&send_waits);CHKERRQ(ierr);
719785e854fSJed Brown   ierr = PetscMalloc1((nsends+1),&dest);CHKERRQ(ierr);
72089d82c54SBarry Smith   cnt = 0;
72189d82c54SBarry Smith   for (i=0; i<size; i++) {
72227c402fcSBarry Smith     if (nprocs[2*i]) {
72332dcc486SBarry Smith       ierr      = MPI_Isend(sends+starts[i],2*nprocs[2*i],MPIU_INT,i,tag1,comm,send_waits+cnt);CHKERRQ(ierr);
72430dcb7c9SBarry Smith       dest[cnt] = i;
72589d82c54SBarry Smith       cnt++;
72689d82c54SBarry Smith     }
72789d82c54SBarry Smith   }
72889d82c54SBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
72989d82c54SBarry Smith 
73089d82c54SBarry Smith   /* wait on receives */
731785e854fSJed Brown   ierr = PetscMalloc1((nrecvs+1),&source);CHKERRQ(ierr);
732785e854fSJed Brown   ierr = PetscMalloc1((nrecvs+1),&len);CHKERRQ(ierr);
73389d82c54SBarry Smith   cnt  = nrecvs;
734785e854fSJed Brown   ierr = PetscMalloc1((ng+1),&nownedsenders);CHKERRQ(ierr);
73532dcc486SBarry Smith   ierr = PetscMemzero(nownedsenders,ng*sizeof(PetscInt));CHKERRQ(ierr);
73689d82c54SBarry Smith   while (cnt) {
73789d82c54SBarry Smith     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
73889d82c54SBarry Smith     /* unpack receives into our local space */
73932dcc486SBarry Smith     ierr          = MPI_Get_count(&recv_status,MPIU_INT,&len[imdex]);CHKERRQ(ierr);
74089d82c54SBarry Smith     source[imdex] = recv_status.MPI_SOURCE;
74130dcb7c9SBarry Smith     len[imdex]    = len[imdex]/2;
742caba0dd0SBarry Smith     /* count how many local owners for each of my global owned indices */
74330dcb7c9SBarry Smith     for (i=0; i<len[imdex]; i++) nownedsenders[recvs[2*imdex*nmax+2*i]-rstart]++;
74489d82c54SBarry Smith     cnt--;
74589d82c54SBarry Smith   }
74689d82c54SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
74789d82c54SBarry Smith 
74830dcb7c9SBarry Smith   /* count how many globally owned indices are on an edge multiplied by how many processors own them. */
749bc8ff85bSBarry Smith   nowned  = 0;
750bc8ff85bSBarry Smith   nownedm = 0;
751bc8ff85bSBarry Smith   for (i=0; i<ng; i++) {
752bc8ff85bSBarry Smith     if (nownedsenders[i] > 1) {nownedm += nownedsenders[i]; nowned++;}
753bc8ff85bSBarry Smith   }
754bc8ff85bSBarry Smith 
755bc8ff85bSBarry Smith   /* create single array to contain rank of all local owners of each globally owned index */
756785e854fSJed Brown   ierr      = PetscMalloc1((nownedm+1),&ownedsenders);CHKERRQ(ierr);
757785e854fSJed Brown   ierr      = PetscMalloc1((ng+1),&starts);CHKERRQ(ierr);
758bc8ff85bSBarry Smith   starts[0] = 0;
759bc8ff85bSBarry Smith   for (i=1; i<ng; i++) {
760bc8ff85bSBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
761bc8ff85bSBarry Smith     else starts[i] = starts[i-1];
762bc8ff85bSBarry Smith   }
763bc8ff85bSBarry Smith 
76430dcb7c9SBarry Smith   /* for each nontrival globally owned node list all arriving processors */
765bc8ff85bSBarry Smith   for (i=0; i<nrecvs; i++) {
766bc8ff85bSBarry Smith     for (j=0; j<len[i]; j++) {
76730dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
768f6e5521dSKarl Rupp       if (nownedsenders[node] > 1) ownedsenders[starts[node]++] = source[i];
769bc8ff85bSBarry Smith     }
770bc8ff85bSBarry Smith   }
771bc8ff85bSBarry Smith 
77207b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
77330dcb7c9SBarry Smith     starts[0] = 0;
77430dcb7c9SBarry Smith     for (i=1; i<ng; i++) {
77530dcb7c9SBarry Smith       if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
77630dcb7c9SBarry Smith       else starts[i] = starts[i-1];
77730dcb7c9SBarry Smith     }
77830dcb7c9SBarry Smith     for (i=0; i<ng; i++) {
77930dcb7c9SBarry Smith       if (nownedsenders[i] > 1) {
7807904a332SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] global node %D local owner processors: ",rank,i+rstart);CHKERRQ(ierr);
78130dcb7c9SBarry Smith         for (j=0; j<nownedsenders[i]; j++) {
7827904a332SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%D ",ownedsenders[starts[i]+j]);CHKERRQ(ierr);
78330dcb7c9SBarry Smith         }
78430dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
78530dcb7c9SBarry Smith       }
78630dcb7c9SBarry Smith     }
7870ec8b6e3SBarry Smith     ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr);
78807b52d57SBarry Smith   } /* -----------------------------------  */
78930dcb7c9SBarry Smith 
7903677ff5aSBarry Smith   /* wait on original sends */
7913a96401aSBarry Smith   if (nsends) {
792785e854fSJed Brown     ierr = PetscMalloc1(nsends,&send_status);CHKERRQ(ierr);
7933a96401aSBarry Smith     ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
7943a96401aSBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
7953a96401aSBarry Smith   }
79689d82c54SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
7973a96401aSBarry Smith   ierr = PetscFree(sends);CHKERRQ(ierr);
7983677ff5aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
7993677ff5aSBarry Smith 
8003677ff5aSBarry Smith   /* pack messages to send back to local owners */
80130dcb7c9SBarry Smith   starts[0] = 0;
80230dcb7c9SBarry Smith   for (i=1; i<ng; i++) {
80330dcb7c9SBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
80430dcb7c9SBarry Smith     else starts[i] = starts[i-1];
80530dcb7c9SBarry Smith   }
80630dcb7c9SBarry Smith   nsends2 = nrecvs;
807785e854fSJed Brown   ierr    = PetscMalloc1((nsends2+1),&nprocs);CHKERRQ(ierr); /* length of each message */
80830dcb7c9SBarry Smith   for (i=0; i<nrecvs; i++) {
80930dcb7c9SBarry Smith     nprocs[i] = 1;
81030dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
81130dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
812f6e5521dSKarl Rupp       if (nownedsenders[node] > 1) nprocs[i] += 2 + nownedsenders[node];
81330dcb7c9SBarry Smith     }
81430dcb7c9SBarry Smith   }
815f6e5521dSKarl Rupp   nt = 0;
816f6e5521dSKarl Rupp   for (i=0; i<nsends2; i++) nt += nprocs[i];
817f6e5521dSKarl Rupp 
818785e854fSJed Brown   ierr = PetscMalloc1((nt+1),&sends2);CHKERRQ(ierr);
819785e854fSJed Brown   ierr = PetscMalloc1((nsends2+1),&starts2);CHKERRQ(ierr);
820f6e5521dSKarl Rupp 
821f6e5521dSKarl Rupp   starts2[0] = 0;
822f6e5521dSKarl Rupp   for (i=1; i<nsends2; i++) starts2[i] = starts2[i-1] + nprocs[i-1];
82330dcb7c9SBarry Smith   /*
82430dcb7c9SBarry Smith      Each message is 1 + nprocs[i] long, and consists of
82530dcb7c9SBarry Smith        (0) the number of nodes being sent back
82630dcb7c9SBarry Smith        (1) the local node number,
82730dcb7c9SBarry Smith        (2) the number of processors sharing it,
82830dcb7c9SBarry Smith        (3) the processors sharing it
82930dcb7c9SBarry Smith   */
83030dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
83130dcb7c9SBarry Smith     cnt = 1;
83230dcb7c9SBarry Smith     sends2[starts2[i]] = 0;
83330dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
83430dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
83530dcb7c9SBarry Smith       if (nownedsenders[node] > 1) {
83630dcb7c9SBarry Smith         sends2[starts2[i]]++;
83730dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = recvs[2*i*nmax+2*j+1];
83830dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = nownedsenders[node];
83932dcc486SBarry Smith         ierr = PetscMemcpy(&sends2[starts2[i]+cnt],&ownedsenders[starts[node]],nownedsenders[node]*sizeof(PetscInt));CHKERRQ(ierr);
84030dcb7c9SBarry Smith         cnt += nownedsenders[node];
84130dcb7c9SBarry Smith       }
84230dcb7c9SBarry Smith     }
84330dcb7c9SBarry Smith   }
84430dcb7c9SBarry Smith 
84530dcb7c9SBarry Smith   /* receive the message lengths */
84630dcb7c9SBarry Smith   nrecvs2 = nsends;
847785e854fSJed Brown   ierr    = PetscMalloc1((nrecvs2+1),&lens2);CHKERRQ(ierr);
848785e854fSJed Brown   ierr    = PetscMalloc1((nrecvs2+1),&starts3);CHKERRQ(ierr);
849785e854fSJed Brown   ierr    = PetscMalloc1((nrecvs2+1),&recv_waits);CHKERRQ(ierr);
85030dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
851d44834fbSBarry Smith     ierr = MPI_Irecv(&lens2[i],1,MPIU_INT,dest[i],tag2,comm,recv_waits+i);CHKERRQ(ierr);
85230dcb7c9SBarry Smith   }
853d44834fbSBarry Smith 
8548a8e0b3aSBarry Smith   /* send the message lengths */
8558a8e0b3aSBarry Smith   for (i=0; i<nsends2; i++) {
8568a8e0b3aSBarry Smith     ierr = MPI_Send(&nprocs[i],1,MPIU_INT,source[i],tag2,comm);CHKERRQ(ierr);
8578a8e0b3aSBarry Smith   }
8588a8e0b3aSBarry Smith 
859d44834fbSBarry Smith   /* wait on receives of lens */
8600c468ba9SBarry Smith   if (nrecvs2) {
861785e854fSJed Brown     ierr = PetscMalloc1(nrecvs2,&recv_statuses);CHKERRQ(ierr);
862d44834fbSBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
863d44834fbSBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8640c468ba9SBarry Smith   }
865a2ea699eSBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
866d44834fbSBarry Smith 
86730dcb7c9SBarry Smith   starts3[0] = 0;
868d44834fbSBarry Smith   nt         = 0;
86930dcb7c9SBarry Smith   for (i=0; i<nrecvs2-1; i++) {
87030dcb7c9SBarry Smith     starts3[i+1] = starts3[i] + lens2[i];
871d44834fbSBarry Smith     nt          += lens2[i];
87230dcb7c9SBarry Smith   }
87376466f69SStefano Zampini   if (nrecvs2) nt += lens2[nrecvs2-1];
874d44834fbSBarry Smith 
875785e854fSJed Brown   ierr = PetscMalloc1((nt+1),&recvs2);CHKERRQ(ierr);
876785e854fSJed Brown   ierr = PetscMalloc1((nrecvs2+1),&recv_waits);CHKERRQ(ierr);
87752b72c4aSBarry Smith   for (i=0; i<nrecvs2; i++) {
87832dcc486SBarry Smith     ierr = MPI_Irecv(recvs2+starts3[i],lens2[i],MPIU_INT,dest[i],tag3,comm,recv_waits+i);CHKERRQ(ierr);
87930dcb7c9SBarry Smith   }
88030dcb7c9SBarry Smith 
88130dcb7c9SBarry Smith   /* send the messages */
882785e854fSJed Brown   ierr = PetscMalloc1((nsends2+1),&send_waits);CHKERRQ(ierr);
88330dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
88432dcc486SBarry Smith     ierr = MPI_Isend(sends2+starts2[i],nprocs[i],MPIU_INT,source[i],tag3,comm,send_waits+i);CHKERRQ(ierr);
88530dcb7c9SBarry Smith   }
88630dcb7c9SBarry Smith 
88730dcb7c9SBarry Smith   /* wait on receives */
8880c468ba9SBarry Smith   if (nrecvs2) {
889785e854fSJed Brown     ierr = PetscMalloc1(nrecvs2,&recv_statuses);CHKERRQ(ierr);
89030dcb7c9SBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
89130dcb7c9SBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8920c468ba9SBarry Smith   }
89330dcb7c9SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
89430dcb7c9SBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
89530dcb7c9SBarry Smith 
89607b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
89730dcb7c9SBarry Smith     cnt = 0;
89830dcb7c9SBarry Smith     for (i=0; i<nrecvs2; i++) {
89930dcb7c9SBarry Smith       nt = recvs2[cnt++];
90030dcb7c9SBarry Smith       for (j=0; j<nt; j++) {
9017904a332SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] local node %D number of subdomains %D: ",rank,recvs2[cnt],recvs2[cnt+1]);CHKERRQ(ierr);
90230dcb7c9SBarry Smith         for (k=0; k<recvs2[cnt+1]; k++) {
9037904a332SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%D ",recvs2[cnt+2+k]);CHKERRQ(ierr);
90430dcb7c9SBarry Smith         }
90530dcb7c9SBarry Smith         cnt += 2 + recvs2[cnt+1];
90630dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
90730dcb7c9SBarry Smith       }
90830dcb7c9SBarry Smith     }
9090ec8b6e3SBarry Smith     ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr);
91007b52d57SBarry Smith   } /* -----------------------------------  */
91130dcb7c9SBarry Smith 
91230dcb7c9SBarry Smith   /* count number subdomains for each local node */
913785e854fSJed Brown   ierr = PetscMalloc1(size,&nprocs);CHKERRQ(ierr);
91432dcc486SBarry Smith   ierr = PetscMemzero(nprocs,size*sizeof(PetscInt));CHKERRQ(ierr);
91530dcb7c9SBarry Smith   cnt  = 0;
91630dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
91730dcb7c9SBarry Smith     nt = recvs2[cnt++];
91830dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
919f6e5521dSKarl Rupp       for (k=0; k<recvs2[cnt+1]; k++) nprocs[recvs2[cnt+2+k]]++;
92030dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
92130dcb7c9SBarry Smith     }
92230dcb7c9SBarry Smith   }
92330dcb7c9SBarry Smith   nt = 0; for (i=0; i<size; i++) nt += (nprocs[i] > 0);
92430dcb7c9SBarry Smith   *nproc    = nt;
925785e854fSJed Brown   ierr = PetscMalloc1((nt+1),procs);CHKERRQ(ierr);
926785e854fSJed Brown   ierr = PetscMalloc1((nt+1),numprocs);CHKERRQ(ierr);
927785e854fSJed Brown   ierr = PetscMalloc1((nt+1),indices);CHKERRQ(ierr);
9280298fd71SBarry Smith   for (i=0;i<nt+1;i++) (*indices)[i]=NULL;
929785e854fSJed Brown   ierr = PetscMalloc1(size,&bprocs);CHKERRQ(ierr);
93030dcb7c9SBarry Smith   cnt       = 0;
93130dcb7c9SBarry Smith   for (i=0; i<size; i++) {
93230dcb7c9SBarry Smith     if (nprocs[i] > 0) {
93330dcb7c9SBarry Smith       bprocs[i]        = cnt;
93430dcb7c9SBarry Smith       (*procs)[cnt]    = i;
93530dcb7c9SBarry Smith       (*numprocs)[cnt] = nprocs[i];
936785e854fSJed Brown       ierr             = PetscMalloc1(nprocs[i],&(*indices)[cnt]);CHKERRQ(ierr);
93730dcb7c9SBarry Smith       cnt++;
93830dcb7c9SBarry Smith     }
93930dcb7c9SBarry Smith   }
94030dcb7c9SBarry Smith 
94130dcb7c9SBarry Smith   /* make the list of subdomains for each nontrivial local node */
94232dcc486SBarry Smith   ierr = PetscMemzero(*numprocs,nt*sizeof(PetscInt));CHKERRQ(ierr);
94330dcb7c9SBarry Smith   cnt  = 0;
94430dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
94530dcb7c9SBarry Smith     nt = recvs2[cnt++];
94630dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
947f6e5521dSKarl Rupp       for (k=0; k<recvs2[cnt+1]; k++) (*indices)[bprocs[recvs2[cnt+2+k]]][(*numprocs)[bprocs[recvs2[cnt+2+k]]]++] = recvs2[cnt];
94830dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
94930dcb7c9SBarry Smith     }
95030dcb7c9SBarry Smith   }
95130dcb7c9SBarry Smith   ierr = PetscFree(bprocs);CHKERRQ(ierr);
95207b52d57SBarry Smith   ierr = PetscFree(recvs2);CHKERRQ(ierr);
95330dcb7c9SBarry Smith 
95407b52d57SBarry Smith   /* sort the node indexing by their global numbers */
95507b52d57SBarry Smith   nt = *nproc;
95607b52d57SBarry Smith   for (i=0; i<nt; i++) {
957785e854fSJed Brown     ierr = PetscMalloc1(((*numprocs)[i]),&tmp);CHKERRQ(ierr);
958f6e5521dSKarl Rupp     for (j=0; j<(*numprocs)[i]; j++) tmp[j] = lindices[(*indices)[i][j]];
95907b52d57SBarry Smith     ierr = PetscSortIntWithArray((*numprocs)[i],tmp,(*indices)[i]);CHKERRQ(ierr);
96007b52d57SBarry Smith     ierr = PetscFree(tmp);CHKERRQ(ierr);
96107b52d57SBarry Smith   }
96207b52d57SBarry Smith 
96307b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
96430dcb7c9SBarry Smith     nt = *nproc;
96530dcb7c9SBarry Smith     for (i=0; i<nt; i++) {
9667904a332SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"[%d] subdomain %D number of indices %D: ",rank,(*procs)[i],(*numprocs)[i]);CHKERRQ(ierr);
96730dcb7c9SBarry Smith       for (j=0; j<(*numprocs)[i]; j++) {
9687904a332SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"%D ",(*indices)[i][j]);CHKERRQ(ierr);
96930dcb7c9SBarry Smith       }
97030dcb7c9SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
97130dcb7c9SBarry Smith     }
9720ec8b6e3SBarry Smith     ierr = PetscSynchronizedFlush(comm,PETSC_STDOUT);CHKERRQ(ierr);
97307b52d57SBarry Smith   } /* -----------------------------------  */
97430dcb7c9SBarry Smith 
97530dcb7c9SBarry Smith   /* wait on sends */
97630dcb7c9SBarry Smith   if (nsends2) {
977785e854fSJed Brown     ierr = PetscMalloc1(nsends2,&send_status);CHKERRQ(ierr);
97830dcb7c9SBarry Smith     ierr = MPI_Waitall(nsends2,send_waits,send_status);CHKERRQ(ierr);
97930dcb7c9SBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
98030dcb7c9SBarry Smith   }
98130dcb7c9SBarry Smith 
98230dcb7c9SBarry Smith   ierr = PetscFree(starts3);CHKERRQ(ierr);
98330dcb7c9SBarry Smith   ierr = PetscFree(dest);CHKERRQ(ierr);
98430dcb7c9SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
9853677ff5aSBarry Smith 
986bc8ff85bSBarry Smith   ierr = PetscFree(nownedsenders);CHKERRQ(ierr);
987bc8ff85bSBarry Smith   ierr = PetscFree(ownedsenders);CHKERRQ(ierr);
988bc8ff85bSBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
98930dcb7c9SBarry Smith   ierr = PetscFree(starts2);CHKERRQ(ierr);
99030dcb7c9SBarry Smith   ierr = PetscFree(lens2);CHKERRQ(ierr);
99189d82c54SBarry Smith 
99289d82c54SBarry Smith   ierr = PetscFree(source);CHKERRQ(ierr);
99397f1f81fSBarry Smith   ierr = PetscFree(len);CHKERRQ(ierr);
99489d82c54SBarry Smith   ierr = PetscFree(recvs);CHKERRQ(ierr);
9953a96401aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
99630dcb7c9SBarry Smith   ierr = PetscFree(sends2);CHKERRQ(ierr);
99724cf384cSBarry Smith 
99824cf384cSBarry Smith   /* put the information about myself as the first entry in the list */
99924cf384cSBarry Smith   first_procs    = (*procs)[0];
100024cf384cSBarry Smith   first_numprocs = (*numprocs)[0];
100124cf384cSBarry Smith   first_indices  = (*indices)[0];
100224cf384cSBarry Smith   for (i=0; i<*nproc; i++) {
100324cf384cSBarry Smith     if ((*procs)[i] == rank) {
100424cf384cSBarry Smith       (*procs)[0]    = (*procs)[i];
100524cf384cSBarry Smith       (*numprocs)[0] = (*numprocs)[i];
100624cf384cSBarry Smith       (*indices)[0]  = (*indices)[i];
100724cf384cSBarry Smith       (*procs)[i]    = first_procs;
100824cf384cSBarry Smith       (*numprocs)[i] = first_numprocs;
100924cf384cSBarry Smith       (*indices)[i]  = first_indices;
101024cf384cSBarry Smith       break;
101124cf384cSBarry Smith     }
101224cf384cSBarry Smith   }
101389d82c54SBarry Smith   PetscFunctionReturn(0);
101489d82c54SBarry Smith }
101589d82c54SBarry Smith 
10164a2ae208SSatish Balay #undef __FUNCT__
10174a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingRestoreInfo"
101807b52d57SBarry Smith /*@C
101907b52d57SBarry Smith     ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by ISLocalToGlobalMappingGetInfo()
102089d82c54SBarry Smith 
102107b52d57SBarry Smith     Collective on ISLocalToGlobalMapping
102207b52d57SBarry Smith 
102307b52d57SBarry Smith     Input Parameters:
102407b52d57SBarry Smith .   mapping - the mapping from local to global indexing
102507b52d57SBarry Smith 
102607b52d57SBarry Smith     Output Parameter:
102707b52d57SBarry Smith +   nproc - number of processors that are connected to this one
102807b52d57SBarry Smith .   proc - neighboring processors
102907b52d57SBarry Smith .   numproc - number of indices for each processor
103007b52d57SBarry Smith -   indices - indices of local nodes shared with neighbor (sorted by global numbering)
103107b52d57SBarry Smith 
103207b52d57SBarry Smith     Level: advanced
103307b52d57SBarry Smith 
103407b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
103507b52d57SBarry Smith           ISLocalToGlobalMappingGetInfo()
103607b52d57SBarry Smith @*/
10377087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
103807b52d57SBarry Smith {
10396849ba73SBarry Smith   PetscErrorCode ierr;
104032dcc486SBarry Smith   PetscInt       i;
104107b52d57SBarry Smith 
104207b52d57SBarry Smith   PetscFunctionBegin;
104305b42c5fSBarry Smith   ierr = PetscFree(*procs);CHKERRQ(ierr);
104405b42c5fSBarry Smith   ierr = PetscFree(*numprocs);CHKERRQ(ierr);
104500ff320aSBarry Smith   if (*indices) {
104605b42c5fSBarry Smith     ierr = PetscFree((*indices)[0]);CHKERRQ(ierr);
104700ff320aSBarry Smith     for (i=1; i<*nproc; i++) {
104805b42c5fSBarry Smith       ierr = PetscFree((*indices)[i]);CHKERRQ(ierr);
104907b52d57SBarry Smith     }
105007b52d57SBarry Smith     ierr = PetscFree(*indices);CHKERRQ(ierr);
105124cf384cSBarry Smith   }
105207b52d57SBarry Smith   PetscFunctionReturn(0);
105307b52d57SBarry Smith }
105486994e45SJed Brown 
105586994e45SJed Brown #undef __FUNCT__
105686994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingGetIndices"
105786994e45SJed Brown /*@C
1058107e9a97SBarry Smith    ISLocalToGlobalMappingGetIndices - Get global indices for every local point that is mapped
105986994e45SJed Brown 
106086994e45SJed Brown    Not Collective
106186994e45SJed Brown 
106286994e45SJed Brown    Input Arguments:
106386994e45SJed Brown . ltog - local to global mapping
106486994e45SJed Brown 
106586994e45SJed Brown    Output Arguments:
1066565245c5SBarry Smith . array - array of indices, the length of this array may be obtained with ISLocalToGlobalMappingGetSize()
106786994e45SJed Brown 
106886994e45SJed Brown    Level: advanced
106986994e45SJed Brown 
1070107e9a97SBarry Smith    Notes: ISLocalToGlobalMappingGetSize() returns the length the this array
1071107e9a97SBarry Smith 
1072107e9a97SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreIndices(), ISLocalToGlobalMappingGetBlockIndices(), ISLocalToGlobalMappingRestoreBlockIndices()
107386994e45SJed Brown @*/
10747087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
107586994e45SJed Brown {
107686994e45SJed Brown   PetscFunctionBegin;
107786994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
107886994e45SJed Brown   PetscValidPointer(array,2);
107945b6f7e9SBarry Smith   if (ltog->bs == 1) {
108086994e45SJed Brown     *array = ltog->indices;
108145b6f7e9SBarry Smith   } else {
108245b6f7e9SBarry Smith     PetscInt       *jj,k,i,j,n = ltog->n, bs = ltog->bs;
108345b6f7e9SBarry Smith     const PetscInt *ii;
108445b6f7e9SBarry Smith     PetscErrorCode ierr;
108545b6f7e9SBarry Smith 
108645b6f7e9SBarry Smith     ierr = PetscMalloc1(bs*n,&jj);CHKERRQ(ierr);
108745b6f7e9SBarry Smith     *array = jj;
108845b6f7e9SBarry Smith     k    = 0;
108945b6f7e9SBarry Smith     ii   = ltog->indices;
109045b6f7e9SBarry Smith     for (i=0; i<n; i++)
109145b6f7e9SBarry Smith       for (j=0; j<bs; j++)
109245b6f7e9SBarry Smith         jj[k++] = bs*ii[i] + j;
109345b6f7e9SBarry Smith   }
109486994e45SJed Brown   PetscFunctionReturn(0);
109586994e45SJed Brown }
109686994e45SJed Brown 
109786994e45SJed Brown #undef __FUNCT__
109886994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingRestoreIndices"
109986994e45SJed Brown /*@C
110086994e45SJed Brown    ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with ISLocalToGlobalMappingRestoreIndices()
110186994e45SJed Brown 
110286994e45SJed Brown    Not Collective
110386994e45SJed Brown 
110486994e45SJed Brown    Input Arguments:
110586994e45SJed Brown + ltog - local to global mapping
110686994e45SJed Brown - array - array of indices
110786994e45SJed Brown 
110886994e45SJed Brown    Level: advanced
110986994e45SJed Brown 
111086994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices()
111186994e45SJed Brown @*/
11127087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
111386994e45SJed Brown {
111486994e45SJed Brown   PetscFunctionBegin;
111586994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
111686994e45SJed Brown   PetscValidPointer(array,2);
111745b6f7e9SBarry Smith   if (ltog->bs == 1 && *array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer");
111845b6f7e9SBarry Smith 
111945b6f7e9SBarry Smith   if (ltog->bs > 1) {
112045b6f7e9SBarry Smith     PetscErrorCode ierr;
112145b6f7e9SBarry Smith     ierr = PetscFree(*(void**)array);CHKERRQ(ierr);
112245b6f7e9SBarry Smith   }
112345b6f7e9SBarry Smith   PetscFunctionReturn(0);
112445b6f7e9SBarry Smith }
112545b6f7e9SBarry Smith 
112645b6f7e9SBarry Smith #undef __FUNCT__
112745b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingGetBlockIndices"
112845b6f7e9SBarry Smith /*@C
112945b6f7e9SBarry Smith    ISLocalToGlobalMappingGetBlockIndices - Get global indices for every local block
113045b6f7e9SBarry Smith 
113145b6f7e9SBarry Smith    Not Collective
113245b6f7e9SBarry Smith 
113345b6f7e9SBarry Smith    Input Arguments:
113445b6f7e9SBarry Smith . ltog - local to global mapping
113545b6f7e9SBarry Smith 
113645b6f7e9SBarry Smith    Output Arguments:
113745b6f7e9SBarry Smith . array - array of indices
113845b6f7e9SBarry Smith 
113945b6f7e9SBarry Smith    Level: advanced
114045b6f7e9SBarry Smith 
114145b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreBlockIndices()
114245b6f7e9SBarry Smith @*/
114345b6f7e9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
114445b6f7e9SBarry Smith {
114545b6f7e9SBarry Smith   PetscFunctionBegin;
114645b6f7e9SBarry Smith   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
114745b6f7e9SBarry Smith   PetscValidPointer(array,2);
114845b6f7e9SBarry Smith   *array = ltog->indices;
114945b6f7e9SBarry Smith   PetscFunctionReturn(0);
115045b6f7e9SBarry Smith }
115145b6f7e9SBarry Smith 
115245b6f7e9SBarry Smith #undef __FUNCT__
115345b6f7e9SBarry Smith #define __FUNCT__ "ISLocalToGlobalMappingRestoreBlockIndices"
115445b6f7e9SBarry Smith /*@C
115545b6f7e9SBarry Smith    ISLocalToGlobalMappingRestoreBlockIndices - Restore indices obtained with ISLocalToGlobalMappingGetBlockIndices()
115645b6f7e9SBarry Smith 
115745b6f7e9SBarry Smith    Not Collective
115845b6f7e9SBarry Smith 
115945b6f7e9SBarry Smith    Input Arguments:
116045b6f7e9SBarry Smith + ltog - local to global mapping
116145b6f7e9SBarry Smith - array - array of indices
116245b6f7e9SBarry Smith 
116345b6f7e9SBarry Smith    Level: advanced
116445b6f7e9SBarry Smith 
116545b6f7e9SBarry Smith .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices()
116645b6f7e9SBarry Smith @*/
116745b6f7e9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreBlockIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
116845b6f7e9SBarry Smith {
116945b6f7e9SBarry Smith   PetscFunctionBegin;
117045b6f7e9SBarry Smith   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
117145b6f7e9SBarry Smith   PetscValidPointer(array,2);
117286994e45SJed Brown   if (*array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer");
11730298fd71SBarry Smith   *array = NULL;
117486994e45SJed Brown   PetscFunctionReturn(0);
117586994e45SJed Brown }
1176f7efa3c7SJed Brown 
1177f7efa3c7SJed Brown #undef __FUNCT__
1178f7efa3c7SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingConcatenate"
1179f7efa3c7SJed Brown /*@C
1180f7efa3c7SJed Brown    ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings
1181f7efa3c7SJed Brown 
1182f7efa3c7SJed Brown    Not Collective
1183f7efa3c7SJed Brown 
1184f7efa3c7SJed Brown    Input Arguments:
1185f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate
1186f7efa3c7SJed Brown . n - number of mappings to concatenate
1187f7efa3c7SJed Brown - ltogs - local to global mappings
1188f7efa3c7SJed Brown 
1189f7efa3c7SJed Brown    Output Arguments:
1190f7efa3c7SJed Brown . ltogcat - new mapping
1191f7efa3c7SJed Brown 
1192f7efa3c7SJed Brown    Level: advanced
1193f7efa3c7SJed Brown 
1194f7efa3c7SJed Brown .seealso: ISLocalToGlobalMappingCreate()
1195f7efa3c7SJed Brown @*/
1196f7efa3c7SJed Brown PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm,PetscInt n,const ISLocalToGlobalMapping ltogs[],ISLocalToGlobalMapping *ltogcat)
1197f7efa3c7SJed Brown {
1198f7efa3c7SJed Brown   PetscInt       i,cnt,m,*idx;
1199f7efa3c7SJed Brown   PetscErrorCode ierr;
1200f7efa3c7SJed Brown 
1201f7efa3c7SJed Brown   PetscFunctionBegin;
1202f7efa3c7SJed Brown   if (n < 0) SETERRQ1(comm,PETSC_ERR_ARG_OUTOFRANGE,"Must have a non-negative number of mappings, given %D",n);
1203f7efa3c7SJed Brown   if (n > 0) PetscValidPointer(ltogs,3);
1204f7efa3c7SJed Brown   for (i=0; i<n; i++) PetscValidHeaderSpecific(ltogs[i],IS_LTOGM_CLASSID,3);
1205f7efa3c7SJed Brown   PetscValidPointer(ltogcat,4);
1206f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1207f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1208f7efa3c7SJed Brown     cnt += m;
1209f7efa3c7SJed Brown   }
1210785e854fSJed Brown   ierr = PetscMalloc1(cnt,&idx);CHKERRQ(ierr);
1211f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1212f7efa3c7SJed Brown     const PetscInt *subidx;
1213f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1214f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1215f7efa3c7SJed Brown     ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr);
1216f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1217f7efa3c7SJed Brown     cnt += m;
1218f7efa3c7SJed Brown   }
1219f0413b6fSBarry Smith   ierr = ISLocalToGlobalMappingCreate(comm,1,cnt,idx,PETSC_OWN_POINTER,ltogcat);CHKERRQ(ierr);
1220f7efa3c7SJed Brown   PetscFunctionReturn(0);
1221f7efa3c7SJed Brown }
122204a59952SBarry Smith 
122304a59952SBarry Smith 
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