xref: /petsc/src/vec/is/utils/isltog.c (revision f2ba6396f7b83edb93500ef33fbc29109fc954a4)
12362add9SBarry Smith 
2b45d2f2cSJed Brown #include <petsc-private/isimpl.h>    /*I "petscis.h"  I*/
32362add9SBarry Smith 
47087cfbeSBarry Smith PetscClassId  IS_LTOGM_CLASSID;
58e58c17dSMatthew Knepley 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetSize"
83b9aefa3SBarry Smith /*@C
93b9aefa3SBarry Smith     ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping.
103b9aefa3SBarry Smith 
113b9aefa3SBarry Smith     Not Collective
123b9aefa3SBarry Smith 
133b9aefa3SBarry Smith     Input Parameter:
143b9aefa3SBarry Smith .   ltog - local to global mapping
153b9aefa3SBarry Smith 
163b9aefa3SBarry Smith     Output Parameter:
173b9aefa3SBarry Smith .   n - the number of entries in the local mapping
183b9aefa3SBarry Smith 
193b9aefa3SBarry Smith     Level: advanced
203b9aefa3SBarry Smith 
21273d9f13SBarry Smith     Concepts: mapping^local to global
223b9aefa3SBarry Smith 
233b9aefa3SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
243b9aefa3SBarry Smith @*/
257087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping,PetscInt *n)
263b9aefa3SBarry Smith {
273b9aefa3SBarry Smith   PetscFunctionBegin;
280700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
294482741eSBarry Smith   PetscValidIntPointer(n,2);
303b9aefa3SBarry Smith   *n = mapping->n;
313b9aefa3SBarry Smith   PetscFunctionReturn(0);
323b9aefa3SBarry Smith }
333b9aefa3SBarry Smith 
344a2ae208SSatish Balay #undef __FUNCT__
354a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingView"
365a5d4f66SBarry Smith /*@C
375a5d4f66SBarry Smith     ISLocalToGlobalMappingView - View a local to global mapping
385a5d4f66SBarry Smith 
39b9cd556bSLois Curfman McInnes     Not Collective
40b9cd556bSLois Curfman McInnes 
415a5d4f66SBarry Smith     Input Parameters:
423b9aefa3SBarry Smith +   ltog - local to global mapping
433b9aefa3SBarry Smith -   viewer - viewer
445a5d4f66SBarry Smith 
45a997ad1aSLois Curfman McInnes     Level: advanced
46a997ad1aSLois Curfman McInnes 
47273d9f13SBarry Smith     Concepts: mapping^local to global
485a5d4f66SBarry Smith 
495a5d4f66SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
505a5d4f66SBarry Smith @*/
517087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping,PetscViewer viewer)
525a5d4f66SBarry Smith {
5332dcc486SBarry Smith   PetscInt        i;
5432dcc486SBarry Smith   PetscMPIInt     rank;
55ace3abfcSBarry Smith   PetscBool       iascii;
566849ba73SBarry Smith   PetscErrorCode  ierr;
575a5d4f66SBarry Smith 
585a5d4f66SBarry Smith   PetscFunctionBegin;
590700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
603050cee2SBarry Smith   if (!viewer) {
617adad957SLisandro Dalcin     ierr = PetscViewerASCIIGetStdout(((PetscObject)mapping)->comm,&viewer);CHKERRQ(ierr);
623050cee2SBarry Smith   }
630700a824SBarry Smith   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
645a5d4f66SBarry Smith 
657adad957SLisandro Dalcin   ierr = MPI_Comm_rank(((PetscObject)mapping)->comm,&rank);CHKERRQ(ierr);
66251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
6732077d6dSBarry Smith   if (iascii) {
687b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr);
695a5d4f66SBarry Smith     for (i=0; i<mapping->n; i++) {
70b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %d %d\n",rank,i,mapping->indices[i]);CHKERRQ(ierr);
716831982aSBarry Smith     }
72b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
737b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr);
747b23a99aSBarry Smith   } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Viewer type %s not supported for ISLocalToGlobalMapping",((PetscObject)viewer)->type_name);
755a5d4f66SBarry Smith   PetscFunctionReturn(0);
765a5d4f66SBarry Smith }
775a5d4f66SBarry Smith 
784a2ae208SSatish Balay #undef __FUNCT__
794a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreateIS"
801f428162SBarry Smith /*@
812bdab257SBarry Smith     ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n)
822bdab257SBarry Smith     ordering and a global parallel ordering.
832bdab257SBarry Smith 
840f5bd95cSBarry Smith     Not collective
85b9cd556bSLois Curfman McInnes 
86a997ad1aSLois Curfman McInnes     Input Parameter:
878c03b21aSDmitry Karpeev .   is - index set containing the global numbers for each local number
882bdab257SBarry Smith 
89a997ad1aSLois Curfman McInnes     Output Parameter:
902bdab257SBarry Smith .   mapping - new mapping data structure
912bdab257SBarry Smith 
92a997ad1aSLois Curfman McInnes     Level: advanced
93a997ad1aSLois Curfman McInnes 
94273d9f13SBarry Smith     Concepts: mapping^local to global
952bdab257SBarry Smith 
962bdab257SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
972bdab257SBarry Smith @*/
987087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreateIS(IS is,ISLocalToGlobalMapping *mapping)
992bdab257SBarry Smith {
1006849ba73SBarry Smith   PetscErrorCode ierr;
1015d0c19d7SBarry Smith   PetscInt       n;
1025d0c19d7SBarry Smith   const PetscInt *indices;
1032bdab257SBarry Smith   MPI_Comm       comm;
1043a40ed3dSBarry Smith 
1053a40ed3dSBarry Smith   PetscFunctionBegin;
1060700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,1);
1074482741eSBarry Smith   PetscValidPointer(mapping,2);
1082bdab257SBarry Smith 
1092bdab257SBarry Smith   ierr = PetscObjectGetComm((PetscObject)is,&comm);CHKERRQ(ierr);
1103b9aefa3SBarry Smith   ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr);
1112bdab257SBarry Smith   ierr = ISGetIndices(is,&indices);CHKERRQ(ierr);
112d5ad8652SBarry Smith   ierr = ISLocalToGlobalMappingCreate(comm,n,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr);
1132bdab257SBarry Smith   ierr = ISRestoreIndices(is,&indices);CHKERRQ(ierr);
1143a40ed3dSBarry Smith   PetscFunctionReturn(0);
1152bdab257SBarry Smith }
1165a5d4f66SBarry Smith 
117a4d96a55SJed Brown #undef __FUNCT__
118a4d96a55SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingCreateSF"
119a4d96a55SJed Brown /*@C
120a4d96a55SJed Brown     ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n)
121a4d96a55SJed Brown     ordering and a global parallel ordering.
122a4d96a55SJed Brown 
123a4d96a55SJed Brown     Collective
124a4d96a55SJed Brown 
125a4d96a55SJed Brown     Input Parameter:
126a4d96a55SJed Brown +   sf - star forest mapping contiguous local indices to (rank, offset)
127a4d96a55SJed Brown -   start - first global index on this process
128a4d96a55SJed Brown 
129a4d96a55SJed Brown     Output Parameter:
130a4d96a55SJed Brown .   mapping - new mapping data structure
131a4d96a55SJed Brown 
132a4d96a55SJed Brown     Level: advanced
133a4d96a55SJed Brown 
134a4d96a55SJed Brown     Concepts: mapping^local to global
135a4d96a55SJed Brown 
136a4d96a55SJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS()
137a4d96a55SJed Brown @*/
138a4d96a55SJed Brown PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf,PetscInt start,ISLocalToGlobalMapping *mapping)
139a4d96a55SJed Brown {
140a4d96a55SJed Brown   PetscErrorCode ierr;
141a4d96a55SJed Brown   PetscInt       i,maxlocal,nroots,nleaves,*globals,*ltog;
142a4d96a55SJed Brown   const PetscInt *ilocal;
143a4d96a55SJed Brown   MPI_Comm       comm;
144a4d96a55SJed Brown 
145a4d96a55SJed Brown   PetscFunctionBegin;
146a4d96a55SJed Brown   PetscValidHeaderSpecific(sf,PETSCSF_CLASSID,1);
147a4d96a55SJed Brown   PetscValidPointer(mapping,3);
148a4d96a55SJed Brown 
149a4d96a55SJed Brown   ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr);
150a4d96a55SJed Brown   ierr = PetscSFGetGraph(sf,&nroots,&nleaves,&ilocal,PETSC_NULL);CHKERRQ(ierr);
151a4d96a55SJed Brown   if (ilocal) {for (i=0,maxlocal=0; i<nleaves; i++) maxlocal = PetscMax(maxlocal,ilocal[i]+1);}
152a4d96a55SJed Brown   else maxlocal = nleaves;
153a4d96a55SJed Brown   ierr = PetscMalloc(nroots*sizeof(PetscInt),&globals);CHKERRQ(ierr);
154a4d96a55SJed Brown   ierr = PetscMalloc(maxlocal*sizeof(PetscInt),&ltog);CHKERRQ(ierr);
155a4d96a55SJed Brown   for (i=0; i<nroots; i++) globals[i] = start + i;
156a4d96a55SJed Brown   for (i=0; i<maxlocal; i++) ltog[i] = -1;
157a4d96a55SJed Brown   ierr = PetscSFBcastBegin(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
158a4d96a55SJed Brown   ierr = PetscSFBcastEnd(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
159a4d96a55SJed Brown   ierr = ISLocalToGlobalMappingCreate(comm,maxlocal,ltog,PETSC_OWN_POINTER,mapping);CHKERRQ(ierr);
160a4d96a55SJed Brown   ierr = PetscFree(globals);CHKERRQ(ierr);
161a4d96a55SJed Brown   PetscFunctionReturn(0);
162a4d96a55SJed Brown }
163b46b645bSBarry Smith 
1644a2ae208SSatish Balay #undef __FUNCT__
1654a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreate"
166ba5bb76aSSatish Balay /*@
16790f02eecSBarry Smith     ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n)
16890f02eecSBarry Smith     ordering and a global parallel ordering.
1692362add9SBarry Smith 
17089d82c54SBarry Smith     Not Collective, but communicator may have more than one process
171b9cd556bSLois Curfman McInnes 
1722362add9SBarry Smith     Input Parameters:
17389d82c54SBarry Smith +   comm - MPI communicator
17490f02eecSBarry Smith .   n - the number of local elements
1759669e4d8SBarry Smith .   indices - the global index for each local element, these do not need to be in increasing order (sorted)
176d5ad8652SBarry Smith -   mode - see PetscCopyMode
1772362add9SBarry Smith 
178a997ad1aSLois Curfman McInnes     Output Parameter:
17990f02eecSBarry Smith .   mapping - new mapping data structure
1802362add9SBarry Smith 
181a997ad1aSLois Curfman McInnes     Level: advanced
182a997ad1aSLois Curfman McInnes 
183273d9f13SBarry Smith     Concepts: mapping^local to global
1842362add9SBarry Smith 
185d5ad8652SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS()
1862362add9SBarry Smith @*/
1877087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreate(MPI_Comm cm,PetscInt n,const PetscInt indices[],PetscCopyMode mode,ISLocalToGlobalMapping *mapping)
1882362add9SBarry Smith {
1896849ba73SBarry Smith   PetscErrorCode ierr;
19032dcc486SBarry Smith   PetscInt       *in;
191b46b645bSBarry Smith 
192b46b645bSBarry Smith   PetscFunctionBegin;
19373911063SBarry Smith   if (n) PetscValidIntPointer(indices,3);
1944482741eSBarry Smith   PetscValidPointer(mapping,4);
195b46b645bSBarry Smith 
1968e58c17dSMatthew Knepley   *mapping = PETSC_NULL;
1978e58c17dSMatthew Knepley #ifndef PETSC_USE_DYNAMIC_LIBRARIES
1982b6de112SBarry Smith   ierr = ISInitializePackage(PETSC_NULL);CHKERRQ(ierr);
1998e58c17dSMatthew Knepley #endif
2002362add9SBarry Smith 
2013194b578SJed Brown   ierr = PetscHeaderCreate(*mapping,_p_ISLocalToGlobalMapping,int,IS_LTOGM_CLASSID,0,"ISLocalToGlobalMapping","Local to global mapping","IS",
20252e6d16bSBarry Smith 			   cm,ISLocalToGlobalMappingDestroy,ISLocalToGlobalMappingView);CHKERRQ(ierr);
203d4bb536fSBarry Smith   (*mapping)->n       = n;
204d4bb536fSBarry Smith   /*
205d4bb536fSBarry Smith     Do not create the global to local mapping. This is only created if
206d4bb536fSBarry Smith     ISGlobalToLocalMapping() is called
207d4bb536fSBarry Smith   */
208d4bb536fSBarry Smith   (*mapping)->globals = 0;
209d5ad8652SBarry Smith   if (mode == PETSC_COPY_VALUES) {
210d5ad8652SBarry Smith     ierr = PetscMalloc(n*sizeof(PetscInt),&in);CHKERRQ(ierr);
211d5ad8652SBarry Smith     ierr = PetscMemcpy(in,indices,n*sizeof(PetscInt));CHKERRQ(ierr);
212d5ad8652SBarry Smith     ierr = PetscLogObjectMemory(*mapping,n*sizeof(PetscInt));CHKERRQ(ierr);
213d5ad8652SBarry Smith     (*mapping)->indices = in;
214d5ad8652SBarry Smith   } else if (mode == PETSC_OWN_POINTER) {
215d5ad8652SBarry Smith     (*mapping)->indices = (PetscInt*)indices;
216d5ad8652SBarry Smith   } else SETERRQ(cm,PETSC_ERR_SUP,"Cannot currently use PETSC_USE_POINTER");
2173a40ed3dSBarry Smith   PetscFunctionReturn(0);
2182362add9SBarry Smith }
2192362add9SBarry Smith 
2204a2ae208SSatish Balay #undef __FUNCT__
2214a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingBlock"
222bce096a4SSatish Balay /*@
223323b833fSBarry Smith     ISLocalToGlobalMappingBlock - Creates a blocked index version of an
224323b833fSBarry Smith        ISLocalToGlobalMapping that is appropriate for MatSetLocalToGlobalMappingBlock()
225323b833fSBarry Smith        and VecSetLocalToGlobalMappingBlock().
226323b833fSBarry Smith 
227323b833fSBarry Smith     Not Collective, but communicator may have more than one process
228323b833fSBarry Smith 
229323b833fSBarry Smith     Input Parameters:
230323b833fSBarry Smith +    inmap - original point-wise mapping
231323b833fSBarry Smith -    bs - block size
232323b833fSBarry Smith 
233323b833fSBarry Smith     Output Parameter:
23469eb54c3SBarry Smith .   outmap - block based mapping; the indices are relative to BLOCKS, not individual vector or matrix entries.
235323b833fSBarry Smith 
236323b833fSBarry Smith     Level: advanced
237323b833fSBarry Smith 
238323b833fSBarry Smith     Concepts: mapping^local to global
239323b833fSBarry Smith 
240323b833fSBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS()
241323b833fSBarry Smith @*/
2427087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingBlock(ISLocalToGlobalMapping inmap,PetscInt bs,ISLocalToGlobalMapping *outmap)
243323b833fSBarry Smith {
2446849ba73SBarry Smith   PetscErrorCode ierr;
24532dcc486SBarry Smith   PetscInt       *ii,i,n;
246323b833fSBarry Smith 
247323b833fSBarry Smith   PetscFunctionBegin;
2480700a824SBarry Smith   PetscValidHeaderSpecific(inmap,IS_LTOGM_CLASSID,1);
249b2beed0aSJed Brown   PetscValidPointer(outmap,3);
250323b833fSBarry Smith   if (bs > 1) {
251323b833fSBarry Smith     n    = inmap->n/bs;
252e32f2f54SBarry Smith     if (n*bs != inmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Pointwise mapping length is not divisible by block size");
25332dcc486SBarry Smith     ierr = PetscMalloc(n*sizeof(PetscInt),&ii);CHKERRQ(ierr);
254323b833fSBarry Smith     for (i=0; i<n; i++) {
255db032c9dSBarry Smith       ii[i] = inmap->indices[bs*i]/bs;
256323b833fSBarry Smith     }
257d5ad8652SBarry Smith     ierr = ISLocalToGlobalMappingCreate(((PetscObject)inmap)->comm,n,ii,PETSC_OWN_POINTER,outmap);CHKERRQ(ierr);
258323b833fSBarry Smith   } else {
259323b833fSBarry Smith     ierr    = PetscObjectReference((PetscObject)inmap);CHKERRQ(ierr);
260c3122656SLisandro Dalcin     *outmap = inmap;
261323b833fSBarry Smith   }
262323b833fSBarry Smith   PetscFunctionReturn(0);
263323b833fSBarry Smith }
264323b833fSBarry Smith 
2654a2ae208SSatish Balay #undef __FUNCT__
2668ab951edSJed Brown #define __FUNCT__ "ISLocalToGlobalMappingUnBlock"
267b2beed0aSJed Brown /*@
268b2beed0aSJed Brown     ISLocalToGlobalMappingUnBlock - Creates a scalar index version of a blocked
269b2beed0aSJed Brown        ISLocalToGlobalMapping
270b2beed0aSJed Brown 
271b2beed0aSJed Brown     Not Collective, but communicator may have more than one process
272b2beed0aSJed Brown 
273b2beed0aSJed Brown     Input Parameter:
274b2beed0aSJed Brown + inmap - block based mapping; the indices are relative to BLOCKS, not individual vector or matrix entries.
275b2beed0aSJed Brown - bs - block size
276b2beed0aSJed Brown 
277b2beed0aSJed Brown     Output Parameter:
278b2beed0aSJed Brown .   outmap - pointwise mapping
279b2beed0aSJed Brown 
280b2beed0aSJed Brown     Level: advanced
281b2beed0aSJed Brown 
282b2beed0aSJed Brown     Concepts: mapping^local to global
283b2beed0aSJed Brown 
284b2beed0aSJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingBlock()
285b2beed0aSJed Brown @*/
2867087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingUnBlock(ISLocalToGlobalMapping inmap,PetscInt bs,ISLocalToGlobalMapping *outmap)
287b2beed0aSJed Brown {
288b2beed0aSJed Brown   PetscErrorCode ierr;
289b2beed0aSJed Brown   PetscInt       *ii,i,n;
290b2beed0aSJed Brown 
291b2beed0aSJed Brown   PetscFunctionBegin;
292b2beed0aSJed Brown   PetscValidHeaderSpecific(inmap,IS_LTOGM_CLASSID,1);
293b2beed0aSJed Brown   PetscValidPointer(outmap,2);
294b2beed0aSJed Brown   if (bs > 1) {
295b2beed0aSJed Brown     n    = inmap->n*bs;
296b2beed0aSJed Brown     ierr = PetscMalloc(n*sizeof(PetscInt),&ii);CHKERRQ(ierr);
297b2beed0aSJed Brown     for (i=0; i<n; i++) {
29894f4c46bSJed Brown       ii[i] = inmap->indices[i/bs]*bs + (i%bs);
299b2beed0aSJed Brown     }
300b2beed0aSJed Brown     ierr = ISLocalToGlobalMappingCreate(((PetscObject)inmap)->comm,n,ii,PETSC_OWN_POINTER,outmap);CHKERRQ(ierr);
301b2beed0aSJed Brown   } else {
302b2beed0aSJed Brown     ierr    = PetscObjectReference((PetscObject)inmap);CHKERRQ(ierr);
303b2beed0aSJed Brown     *outmap = inmap;
304b2beed0aSJed Brown   }
305b2beed0aSJed Brown   PetscFunctionReturn(0);
306b2beed0aSJed Brown }
307b2beed0aSJed Brown 
308b2beed0aSJed Brown #undef __FUNCT__
3094a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingDestroy"
31090f02eecSBarry Smith /*@
31190f02eecSBarry Smith    ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n)
31290f02eecSBarry Smith    ordering and a global parallel ordering.
31390f02eecSBarry Smith 
3140f5bd95cSBarry Smith    Note Collective
315b9cd556bSLois Curfman McInnes 
31690f02eecSBarry Smith    Input Parameters:
31790f02eecSBarry Smith .  mapping - mapping data structure
31890f02eecSBarry Smith 
319a997ad1aSLois Curfman McInnes    Level: advanced
320a997ad1aSLois Curfman McInnes 
3213acfe500SLois Curfman McInnes .seealso: ISLocalToGlobalMappingCreate()
32290f02eecSBarry Smith @*/
3236bf464f9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping)
32490f02eecSBarry Smith {
325dfbe8321SBarry Smith   PetscErrorCode ierr;
3263a40ed3dSBarry Smith   PetscFunctionBegin;
3276bf464f9SBarry Smith   if (!*mapping) PetscFunctionReturn(0);
3286bf464f9SBarry Smith   PetscValidHeaderSpecific((*mapping),IS_LTOGM_CLASSID,1);
329997056adSBarry Smith   if (--((PetscObject)(*mapping))->refct > 0) {*mapping = 0;PetscFunctionReturn(0);}
3306bf464f9SBarry Smith   ierr = PetscFree((*mapping)->indices);CHKERRQ(ierr);
3316bf464f9SBarry Smith   ierr = PetscFree((*mapping)->globals);CHKERRQ(ierr);
332d38fa0fbSBarry Smith   ierr = PetscHeaderDestroy(mapping);CHKERRQ(ierr);
333992144d0SBarry Smith   *mapping = 0;
3343a40ed3dSBarry Smith   PetscFunctionReturn(0);
33590f02eecSBarry Smith }
33690f02eecSBarry Smith 
3374a2ae208SSatish Balay #undef __FUNCT__
3384a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingApplyIS"
33990f02eecSBarry Smith /*@
3403acfe500SLois Curfman McInnes     ISLocalToGlobalMappingApplyIS - Creates from an IS in the local numbering
3413acfe500SLois Curfman McInnes     a new index set using the global numbering defined in an ISLocalToGlobalMapping
3423acfe500SLois Curfman McInnes     context.
34390f02eecSBarry Smith 
344b9cd556bSLois Curfman McInnes     Not collective
345b9cd556bSLois Curfman McInnes 
34690f02eecSBarry Smith     Input Parameters:
347b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
348b9cd556bSLois Curfman McInnes -   is - index set in local numbering
34990f02eecSBarry Smith 
35090f02eecSBarry Smith     Output Parameters:
35190f02eecSBarry Smith .   newis - index set in global numbering
35290f02eecSBarry Smith 
353a997ad1aSLois Curfman McInnes     Level: advanced
354a997ad1aSLois Curfman McInnes 
355273d9f13SBarry Smith     Concepts: mapping^local to global
3563acfe500SLois Curfman McInnes 
35790f02eecSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
358d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy(), ISGlobalToLocalMappingApply()
35990f02eecSBarry Smith @*/
3607087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping,IS is,IS *newis)
36190f02eecSBarry Smith {
3626849ba73SBarry Smith   PetscErrorCode ierr;
3635d0c19d7SBarry Smith   PetscInt       n,i,*idxmap,*idxout,Nmax = mapping->n;
3645d0c19d7SBarry Smith   const PetscInt *idxin;
3653a40ed3dSBarry Smith 
3663a40ed3dSBarry Smith   PetscFunctionBegin;
3670700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
3680700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,2);
3694482741eSBarry Smith   PetscValidPointer(newis,3);
37090f02eecSBarry Smith 
3713b9aefa3SBarry Smith   ierr   = ISGetLocalSize(is,&n);CHKERRQ(ierr);
37290f02eecSBarry Smith   ierr   = ISGetIndices(is,&idxin);CHKERRQ(ierr);
37390f02eecSBarry Smith   idxmap = mapping->indices;
37490f02eecSBarry Smith 
3757c334f02SBarry Smith   ierr = PetscMalloc(n*sizeof(PetscInt),&idxout);CHKERRQ(ierr);
37690f02eecSBarry Smith   for (i=0; i<n; i++) {
377e32f2f54SBarry Smith     if (idxin[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %d too large %d (max) at %d",idxin[i],Nmax-1,i);
37890f02eecSBarry Smith     idxout[i] = idxmap[idxin[i]];
37990f02eecSBarry Smith   }
3803b9aefa3SBarry Smith   ierr = ISRestoreIndices(is,&idxin);CHKERRQ(ierr);
38170b3c8c7SBarry Smith   ierr = ISCreateGeneral(PETSC_COMM_SELF,n,idxout,PETSC_OWN_POINTER,newis);CHKERRQ(ierr);
3823a40ed3dSBarry Smith   PetscFunctionReturn(0);
38390f02eecSBarry Smith }
38490f02eecSBarry Smith 
38589d82c54SBarry Smith /*MC
3863acfe500SLois Curfman McInnes    ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering
3873acfe500SLois Curfman McInnes    and converts them to the global numbering.
38890f02eecSBarry Smith 
389eca87e8dSBarry Smith    Synopsis:
390*f2ba6396SBarry Smith    #include "petscis.h"
391eca87e8dSBarry Smith    PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping,int N,int in[],int out[])
392eca87e8dSBarry Smith 
393b9cd556bSLois Curfman McInnes    Not collective
394b9cd556bSLois Curfman McInnes 
395bb25748dSBarry Smith    Input Parameters:
396b9cd556bSLois Curfman McInnes +  mapping - the local to global mapping context
397bb25748dSBarry Smith .  N - number of integers
398b9cd556bSLois Curfman McInnes -  in - input indices in local numbering
399bb25748dSBarry Smith 
400bb25748dSBarry Smith    Output Parameter:
401bb25748dSBarry Smith .  out - indices in global numbering
402bb25748dSBarry Smith 
403b9cd556bSLois Curfman McInnes    Notes:
404b9cd556bSLois Curfman McInnes    The in and out array parameters may be identical.
405d4bb536fSBarry Smith 
406a997ad1aSLois Curfman McInnes    Level: advanced
407a997ad1aSLois Curfman McInnes 
408bb25748dSBarry Smith .seealso: ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(),
4090752156aSBarry Smith           ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(),
410d4bb536fSBarry Smith           AOPetscToApplication(), ISGlobalToLocalMappingApply()
411bb25748dSBarry Smith 
412273d9f13SBarry Smith     Concepts: mapping^local to global
413d4bb536fSBarry Smith 
41489d82c54SBarry Smith M*/
415d4bb536fSBarry Smith 
416d4bb536fSBarry Smith /* -----------------------------------------------------------------------------------------*/
417d4bb536fSBarry Smith 
4184a2ae208SSatish Balay #undef __FUNCT__
4194a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingSetUp_Private"
420d4bb536fSBarry Smith /*
421d4bb536fSBarry Smith     Creates the global fields in the ISLocalToGlobalMapping structure
422d4bb536fSBarry Smith */
4236849ba73SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Private(ISLocalToGlobalMapping mapping)
424d4bb536fSBarry Smith {
4256849ba73SBarry Smith   PetscErrorCode ierr;
42632dcc486SBarry Smith   PetscInt       i,*idx = mapping->indices,n = mapping->n,end,start,*globals;
427d4bb536fSBarry Smith 
4283a40ed3dSBarry Smith   PetscFunctionBegin;
429d4bb536fSBarry Smith   end   = 0;
430ec268f7cSJed Brown   start = PETSC_MAX_INT;
431d4bb536fSBarry Smith 
432d4bb536fSBarry Smith   for (i=0; i<n; i++) {
433d4bb536fSBarry Smith     if (idx[i] < 0) continue;
434d4bb536fSBarry Smith     if (idx[i] < start) start = idx[i];
435d4bb536fSBarry Smith     if (idx[i] > end)   end   = idx[i];
436d4bb536fSBarry Smith   }
437d4bb536fSBarry Smith   if (start > end) {start = 0; end = -1;}
438d4bb536fSBarry Smith   mapping->globalstart = start;
439d4bb536fSBarry Smith   mapping->globalend   = end;
440d4bb536fSBarry Smith 
44132dcc486SBarry Smith   ierr             = PetscMalloc((end-start+2)*sizeof(PetscInt),&globals);CHKERRQ(ierr);
442b0a32e0cSBarry Smith   mapping->globals = globals;
443d4bb536fSBarry Smith   for (i=0; i<end-start+1; i++) {
444d4bb536fSBarry Smith     globals[i] = -1;
445d4bb536fSBarry Smith   }
446d4bb536fSBarry Smith   for (i=0; i<n; i++) {
447d4bb536fSBarry Smith     if (idx[i] < 0) continue;
448d4bb536fSBarry Smith     globals[idx[i] - start] = i;
449d4bb536fSBarry Smith   }
450d4bb536fSBarry Smith 
45152e6d16bSBarry Smith   ierr = PetscLogObjectMemory(mapping,(end-start+1)*sizeof(PetscInt));CHKERRQ(ierr);
4523a40ed3dSBarry Smith   PetscFunctionReturn(0);
453d4bb536fSBarry Smith }
454d4bb536fSBarry Smith 
4554a2ae208SSatish Balay #undef __FUNCT__
4564a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingApply"
457d4bb536fSBarry Smith /*@
458a997ad1aSLois Curfman McInnes     ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers
459a997ad1aSLois Curfman McInnes     specified with a global numbering.
460d4bb536fSBarry Smith 
461b9cd556bSLois Curfman McInnes     Not collective
462b9cd556bSLois Curfman McInnes 
463d4bb536fSBarry Smith     Input Parameters:
464b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
465d4bb536fSBarry Smith .   type - IS_GTOLM_MASK - replaces global indices with no local value with -1
466d4bb536fSBarry Smith            IS_GTOLM_DROP - drops the indices with no local value from the output list
467d4bb536fSBarry Smith .   n - number of global indices to map
468b9cd556bSLois Curfman McInnes -   idx - global indices to map
469d4bb536fSBarry Smith 
470d4bb536fSBarry Smith     Output Parameters:
471b9cd556bSLois Curfman McInnes +   nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n)
472b9cd556bSLois Curfman McInnes -   idxout - local index of each global index, one must pass in an array long enough
473e182c471SBarry Smith              to hold all the indices. You can call ISGlobalToLocalMappingApply() with
474e182c471SBarry Smith              idxout == PETSC_NULL to determine the required length (returned in nout)
475e182c471SBarry Smith              and then allocate the required space and call ISGlobalToLocalMappingApply()
476e182c471SBarry Smith              a second time to set the values.
477d4bb536fSBarry Smith 
478b9cd556bSLois Curfman McInnes     Notes:
479b9cd556bSLois Curfman McInnes     Either nout or idxout may be PETSC_NULL. idx and idxout may be identical.
480d4bb536fSBarry Smith 
4810f5bd95cSBarry Smith     This is not scalable in memory usage. Each processor requires O(Nglobal) size
4820f5bd95cSBarry Smith     array to compute these.
4830f5bd95cSBarry Smith 
484a997ad1aSLois Curfman McInnes     Level: advanced
485a997ad1aSLois Curfman McInnes 
48632fd6b96SBarry Smith     Developer Note: The manual page states that idx and idxout may be identical but the calling
48732fd6b96SBarry Smith        sequence declares idx as const so it cannot be the same as idxout.
48832fd6b96SBarry Smith 
489273d9f13SBarry Smith     Concepts: mapping^global to local
490d4bb536fSBarry Smith 
491d4bb536fSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
492d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy()
493d4bb536fSBarry Smith @*/
4947087cfbeSBarry Smith PetscErrorCode  ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingType type,
49532dcc486SBarry Smith                                   PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[])
496d4bb536fSBarry Smith {
49732dcc486SBarry Smith   PetscInt       i,*globals,nf = 0,tmp,start,end;
4986849ba73SBarry Smith   PetscErrorCode ierr;
499d4bb536fSBarry Smith 
5003a40ed3dSBarry Smith   PetscFunctionBegin;
5010700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
502d4bb536fSBarry Smith   if (!mapping->globals) {
503d4bb536fSBarry Smith     ierr = ISGlobalToLocalMappingSetUp_Private(mapping);CHKERRQ(ierr);
504d4bb536fSBarry Smith   }
505d4bb536fSBarry Smith   globals = mapping->globals;
506d4bb536fSBarry Smith   start   = mapping->globalstart;
507d4bb536fSBarry Smith   end     = mapping->globalend;
508d4bb536fSBarry Smith 
509d4bb536fSBarry Smith   if (type == IS_GTOLM_MASK) {
510d4bb536fSBarry Smith     if (idxout) {
511d4bb536fSBarry Smith       for (i=0; i<n; i++) {
512d4bb536fSBarry Smith         if (idx[i] < 0) idxout[i] = idx[i];
513d4bb536fSBarry Smith         else if (idx[i] < start) idxout[i] = -1;
514d4bb536fSBarry Smith         else if (idx[i] > end)   idxout[i] = -1;
515d4bb536fSBarry Smith         else                     idxout[i] = globals[idx[i] - start];
516d4bb536fSBarry Smith       }
517d4bb536fSBarry Smith     }
518d4bb536fSBarry Smith     if (nout) *nout = n;
519d4bb536fSBarry Smith   } else {
520d4bb536fSBarry Smith     if (idxout) {
521d4bb536fSBarry Smith       for (i=0; i<n; i++) {
522d4bb536fSBarry Smith         if (idx[i] < 0) continue;
523d4bb536fSBarry Smith         if (idx[i] < start) continue;
524d4bb536fSBarry Smith         if (idx[i] > end) continue;
525d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
526d4bb536fSBarry Smith         if (tmp < 0) continue;
527d4bb536fSBarry Smith         idxout[nf++] = tmp;
528d4bb536fSBarry Smith       }
529d4bb536fSBarry Smith     } else {
530d4bb536fSBarry Smith       for (i=0; i<n; i++) {
531d4bb536fSBarry Smith         if (idx[i] < 0) continue;
532d4bb536fSBarry Smith         if (idx[i] < start) continue;
533d4bb536fSBarry Smith         if (idx[i] > end) continue;
534d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
535d4bb536fSBarry Smith         if (tmp < 0) continue;
536d4bb536fSBarry Smith         nf++;
537d4bb536fSBarry Smith       }
538d4bb536fSBarry Smith     }
539d4bb536fSBarry Smith     if (nout) *nout = nf;
540d4bb536fSBarry Smith   }
541d4bb536fSBarry Smith 
5423a40ed3dSBarry Smith   PetscFunctionReturn(0);
543d4bb536fSBarry Smith }
54490f02eecSBarry Smith 
5454a2ae208SSatish Balay #undef __FUNCT__
5464a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetInfo"
54789d82c54SBarry Smith /*@C
54889d82c54SBarry Smith     ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each processor and
54989d82c54SBarry Smith      each index shared by more than one processor
55089d82c54SBarry Smith 
55189d82c54SBarry Smith     Collective on ISLocalToGlobalMapping
55289d82c54SBarry Smith 
55389d82c54SBarry Smith     Input Parameters:
55489d82c54SBarry Smith .   mapping - the mapping from local to global indexing
55589d82c54SBarry Smith 
55689d82c54SBarry Smith     Output Parameter:
55789d82c54SBarry Smith +   nproc - number of processors that are connected to this one
55889d82c54SBarry Smith .   proc - neighboring processors
55907b52d57SBarry Smith .   numproc - number of indices for each subdomain (processor)
5603463a7baSJed Brown -   indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering)
56189d82c54SBarry Smith 
56289d82c54SBarry Smith     Level: advanced
56389d82c54SBarry Smith 
564273d9f13SBarry Smith     Concepts: mapping^local to global
56589d82c54SBarry Smith 
5662cfcea29SBarry Smith     Fortran Usage:
5672cfcea29SBarry Smith $        ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by
5682cfcea29SBarry Smith $        ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc],
5692cfcea29SBarry Smith           PetscInt indices[nproc][numprocmax],ierr)
5702cfcea29SBarry Smith         There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and
5712cfcea29SBarry Smith         indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough.
5722cfcea29SBarry Smith 
5732cfcea29SBarry Smith 
57407b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
57507b52d57SBarry Smith           ISLocalToGlobalMappingRestoreInfo()
57689d82c54SBarry Smith @*/
5777087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
57889d82c54SBarry Smith {
5796849ba73SBarry Smith   PetscErrorCode ierr;
58097f1f81fSBarry Smith   PetscMPIInt    size,rank,tag1,tag2,tag3,*len,*source,imdex;
58132dcc486SBarry Smith   PetscInt       i,n = mapping->n,Ng,ng,max = 0,*lindices = mapping->indices;
58232dcc486SBarry Smith   PetscInt       *nprocs,*owner,nsends,*sends,j,*starts,nmax,nrecvs,*recvs,proc;
58397f1f81fSBarry Smith   PetscInt       cnt,scale,*ownedsenders,*nownedsenders,rstart,nowned;
58432dcc486SBarry Smith   PetscInt       node,nownedm,nt,*sends2,nsends2,*starts2,*lens2,*dest,nrecvs2,*starts3,*recvs2,k,*bprocs,*tmp;
58532dcc486SBarry Smith   PetscInt       first_procs,first_numprocs,*first_indices;
58689d82c54SBarry Smith   MPI_Request    *recv_waits,*send_waits;
58730dcb7c9SBarry Smith   MPI_Status     recv_status,*send_status,*recv_statuses;
5887adad957SLisandro Dalcin   MPI_Comm       comm = ((PetscObject)mapping)->comm;
589ace3abfcSBarry Smith   PetscBool      debug = PETSC_FALSE;
59089d82c54SBarry Smith 
59189d82c54SBarry Smith   PetscFunctionBegin;
5920700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
59324cf384cSBarry Smith   ierr   = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
59424cf384cSBarry Smith   ierr   = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
59524cf384cSBarry Smith   if (size == 1) {
59624cf384cSBarry Smith     *nproc         = 0;
59724cf384cSBarry Smith     *procs         = PETSC_NULL;
59832dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt),numprocs);CHKERRQ(ierr);
5991e2105dcSBarry Smith     (*numprocs)[0] = 0;
60032dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt*),indices);CHKERRQ(ierr);
6011e2105dcSBarry Smith     (*indices)[0]  = PETSC_NULL;
60224cf384cSBarry Smith     PetscFunctionReturn(0);
60324cf384cSBarry Smith   }
60424cf384cSBarry Smith 
605acfcf0e5SJed Brown   ierr = PetscOptionsGetBool(PETSC_NULL,"-islocaltoglobalmappinggetinfo_debug",&debug,PETSC_NULL);CHKERRQ(ierr);
60607b52d57SBarry Smith 
6073677ff5aSBarry Smith   /*
6083677ff5aSBarry Smith     Notes on ISLocalToGlobalMappingGetInfo
6093677ff5aSBarry Smith 
6103677ff5aSBarry Smith     globally owned node - the nodes that have been assigned to this processor in global
6113677ff5aSBarry Smith            numbering, just for this routine.
6123677ff5aSBarry Smith 
6133677ff5aSBarry Smith     nontrivial globally owned node - node assigned to this processor that is on a subdomain
6143677ff5aSBarry Smith            boundary (i.e. is has more than one local owner)
6153677ff5aSBarry Smith 
6163677ff5aSBarry Smith     locally owned node - node that exists on this processors subdomain
6173677ff5aSBarry Smith 
6183677ff5aSBarry Smith     nontrivial locally owned node - node that is not in the interior (i.e. has more than one
6193677ff5aSBarry Smith            local subdomain
6203677ff5aSBarry Smith   */
62124cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag1);CHKERRQ(ierr);
62224cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag2);CHKERRQ(ierr);
62324cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag3);CHKERRQ(ierr);
62489d82c54SBarry Smith 
62589d82c54SBarry Smith   for (i=0; i<n; i++) {
62689d82c54SBarry Smith     if (lindices[i] > max) max = lindices[i];
62789d82c54SBarry Smith   }
62832dcc486SBarry Smith   ierr   = MPI_Allreduce(&max,&Ng,1,MPIU_INT,MPI_MAX,comm);CHKERRQ(ierr);
62978058e43SBarry Smith   Ng++;
63089d82c54SBarry Smith   ierr   = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
63189d82c54SBarry Smith   ierr   = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
632bc8ff85bSBarry Smith   scale  = Ng/size + 1;
633a2e34c3dSBarry Smith   ng     = scale; if (rank == size-1) ng = Ng - scale*(size-1); ng = PetscMax(1,ng);
634caba0dd0SBarry Smith   rstart = scale*rank;
63589d82c54SBarry Smith 
63689d82c54SBarry Smith   /* determine ownership ranges of global indices */
6377c334f02SBarry Smith   ierr = PetscMalloc(2*size*sizeof(PetscInt),&nprocs);CHKERRQ(ierr);
63832dcc486SBarry Smith   ierr = PetscMemzero(nprocs,2*size*sizeof(PetscInt));CHKERRQ(ierr);
63989d82c54SBarry Smith 
64089d82c54SBarry Smith   /* determine owners of each local node  */
6417c334f02SBarry Smith   ierr = PetscMalloc(n*sizeof(PetscInt),&owner);CHKERRQ(ierr);
64289d82c54SBarry Smith   for (i=0; i<n; i++) {
6433677ff5aSBarry Smith     proc             = lindices[i]/scale; /* processor that globally owns this index */
64427c402fcSBarry Smith     nprocs[2*proc+1] = 1;                 /* processor globally owns at least one of ours */
6453677ff5aSBarry Smith     owner[i]         = proc;
64627c402fcSBarry Smith     nprocs[2*proc]++;                     /* count of how many that processor globally owns of ours */
64789d82c54SBarry Smith   }
64827c402fcSBarry Smith   nsends = 0; for (i=0; i<size; i++) nsends += nprocs[2*i+1];
6491e2582c4SBarry Smith   ierr = PetscInfo1(mapping,"Number of global owners for my local data %d\n",nsends);CHKERRQ(ierr);
65089d82c54SBarry Smith 
65189d82c54SBarry Smith   /* inform other processors of number of messages and max length*/
65227c402fcSBarry Smith   ierr = PetscMaxSum(comm,nprocs,&nmax,&nrecvs);CHKERRQ(ierr);
6531e2582c4SBarry Smith   ierr = PetscInfo1(mapping,"Number of local owners for my global data %d\n",nrecvs);CHKERRQ(ierr);
65489d82c54SBarry Smith 
65589d82c54SBarry Smith   /* post receives for owned rows */
65632dcc486SBarry Smith   ierr = PetscMalloc((2*nrecvs+1)*(nmax+1)*sizeof(PetscInt),&recvs);CHKERRQ(ierr);
657b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
65889d82c54SBarry Smith   for (i=0; i<nrecvs; i++) {
65932dcc486SBarry Smith     ierr = MPI_Irecv(recvs+2*nmax*i,2*nmax,MPIU_INT,MPI_ANY_SOURCE,tag1,comm,recv_waits+i);CHKERRQ(ierr);
66089d82c54SBarry Smith   }
66189d82c54SBarry Smith 
66289d82c54SBarry Smith   /* pack messages containing lists of local nodes to owners */
66332dcc486SBarry Smith   ierr       = PetscMalloc((2*n+1)*sizeof(PetscInt),&sends);CHKERRQ(ierr);
66432dcc486SBarry Smith   ierr       = PetscMalloc((size+1)*sizeof(PetscInt),&starts);CHKERRQ(ierr);
66589d82c54SBarry Smith   starts[0]  = 0;
66627c402fcSBarry Smith   for (i=1; i<size; i++) { starts[i] = starts[i-1] + 2*nprocs[2*i-2];}
66789d82c54SBarry Smith   for (i=0; i<n; i++) {
66889d82c54SBarry Smith     sends[starts[owner[i]]++] = lindices[i];
66930dcb7c9SBarry Smith     sends[starts[owner[i]]++] = i;
67089d82c54SBarry Smith   }
67189d82c54SBarry Smith   ierr = PetscFree(owner);CHKERRQ(ierr);
67289d82c54SBarry Smith   starts[0]  = 0;
67327c402fcSBarry Smith   for (i=1; i<size; i++) { starts[i] = starts[i-1] + 2*nprocs[2*i-2];}
67489d82c54SBarry Smith 
67589d82c54SBarry Smith   /* send the messages */
676b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
67732dcc486SBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(PetscInt),&dest);CHKERRQ(ierr);
67889d82c54SBarry Smith   cnt = 0;
67989d82c54SBarry Smith   for (i=0; i<size; i++) {
68027c402fcSBarry Smith     if (nprocs[2*i]) {
68132dcc486SBarry Smith       ierr      = MPI_Isend(sends+starts[i],2*nprocs[2*i],MPIU_INT,i,tag1,comm,send_waits+cnt);CHKERRQ(ierr);
68230dcb7c9SBarry Smith       dest[cnt] = i;
68389d82c54SBarry Smith       cnt++;
68489d82c54SBarry Smith     }
68589d82c54SBarry Smith   }
68689d82c54SBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
68789d82c54SBarry Smith 
68889d82c54SBarry Smith   /* wait on receives */
68997f1f81fSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(PetscMPIInt),&source);CHKERRQ(ierr);
69097f1f81fSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(PetscMPIInt),&len);CHKERRQ(ierr);
69189d82c54SBarry Smith   cnt  = nrecvs;
69232dcc486SBarry Smith   ierr = PetscMalloc((ng+1)*sizeof(PetscInt),&nownedsenders);CHKERRQ(ierr);
69332dcc486SBarry Smith   ierr = PetscMemzero(nownedsenders,ng*sizeof(PetscInt));CHKERRQ(ierr);
69489d82c54SBarry Smith   while (cnt) {
69589d82c54SBarry Smith     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
69689d82c54SBarry Smith     /* unpack receives into our local space */
69732dcc486SBarry Smith     ierr           = MPI_Get_count(&recv_status,MPIU_INT,&len[imdex]);CHKERRQ(ierr);
69889d82c54SBarry Smith     source[imdex]  = recv_status.MPI_SOURCE;
69930dcb7c9SBarry Smith     len[imdex]     = len[imdex]/2;
700caba0dd0SBarry Smith     /* count how many local owners for each of my global owned indices */
70130dcb7c9SBarry Smith     for (i=0; i<len[imdex]; i++) nownedsenders[recvs[2*imdex*nmax+2*i]-rstart]++;
70289d82c54SBarry Smith     cnt--;
70389d82c54SBarry Smith   }
70489d82c54SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
70589d82c54SBarry Smith 
70630dcb7c9SBarry Smith   /* count how many globally owned indices are on an edge multiplied by how many processors own them. */
707bc8ff85bSBarry Smith   nowned  = 0;
708bc8ff85bSBarry Smith   nownedm = 0;
709bc8ff85bSBarry Smith   for (i=0; i<ng; i++) {
710bc8ff85bSBarry Smith     if (nownedsenders[i] > 1) {nownedm += nownedsenders[i]; nowned++;}
711bc8ff85bSBarry Smith   }
712bc8ff85bSBarry Smith 
713bc8ff85bSBarry Smith   /* create single array to contain rank of all local owners of each globally owned index */
71432dcc486SBarry Smith   ierr      = PetscMalloc((nownedm+1)*sizeof(PetscInt),&ownedsenders);CHKERRQ(ierr);
71532dcc486SBarry Smith   ierr      = PetscMalloc((ng+1)*sizeof(PetscInt),&starts);CHKERRQ(ierr);
716bc8ff85bSBarry Smith   starts[0] = 0;
717bc8ff85bSBarry Smith   for (i=1; i<ng; i++) {
718bc8ff85bSBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
719bc8ff85bSBarry Smith     else starts[i] = starts[i-1];
720bc8ff85bSBarry Smith   }
721bc8ff85bSBarry Smith 
72230dcb7c9SBarry Smith   /* for each nontrival globally owned node list all arriving processors */
723bc8ff85bSBarry Smith   for (i=0; i<nrecvs; i++) {
724bc8ff85bSBarry Smith     for (j=0; j<len[i]; j++) {
72530dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
726bc8ff85bSBarry Smith       if (nownedsenders[node] > 1) {
727bc8ff85bSBarry Smith         ownedsenders[starts[node]++] = source[i];
728bc8ff85bSBarry Smith       }
729bc8ff85bSBarry Smith     }
730bc8ff85bSBarry Smith   }
731bc8ff85bSBarry Smith 
73207b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
73330dcb7c9SBarry Smith     starts[0]    = 0;
73430dcb7c9SBarry Smith     for (i=1; i<ng; i++) {
73530dcb7c9SBarry Smith       if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
73630dcb7c9SBarry Smith       else starts[i] = starts[i-1];
73730dcb7c9SBarry Smith     }
73830dcb7c9SBarry Smith     for (i=0; i<ng; i++) {
73930dcb7c9SBarry Smith       if (nownedsenders[i] > 1) {
74030dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] global node %d local owner processors: ",rank,i+rstart);CHKERRQ(ierr);
74130dcb7c9SBarry Smith         for (j=0; j<nownedsenders[i]; j++) {
74230dcb7c9SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%d ",ownedsenders[starts[i]+j]);CHKERRQ(ierr);
74330dcb7c9SBarry Smith         }
74430dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
74530dcb7c9SBarry Smith       }
74630dcb7c9SBarry Smith     }
74730dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
74807b52d57SBarry Smith   }/* -----------------------------------  */
74930dcb7c9SBarry Smith 
7503677ff5aSBarry Smith   /* wait on original sends */
7513a96401aSBarry Smith   if (nsends) {
752b0a32e0cSBarry Smith     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
7533a96401aSBarry Smith     ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
7543a96401aSBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
7553a96401aSBarry Smith   }
75689d82c54SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
7573a96401aSBarry Smith   ierr = PetscFree(sends);CHKERRQ(ierr);
7583677ff5aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
7593677ff5aSBarry Smith 
7603677ff5aSBarry Smith   /* pack messages to send back to local owners */
76130dcb7c9SBarry Smith   starts[0]    = 0;
76230dcb7c9SBarry Smith   for (i=1; i<ng; i++) {
76330dcb7c9SBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
76430dcb7c9SBarry Smith     else starts[i] = starts[i-1];
76530dcb7c9SBarry Smith   }
76630dcb7c9SBarry Smith   nsends2 = nrecvs;
76732dcc486SBarry Smith   ierr    = PetscMalloc((nsends2+1)*sizeof(PetscInt),&nprocs);CHKERRQ(ierr); /* length of each message */
76830dcb7c9SBarry Smith   for (i=0; i<nrecvs; i++) {
76930dcb7c9SBarry Smith     nprocs[i] = 1;
77030dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
77130dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
77230dcb7c9SBarry Smith       if (nownedsenders[node] > 1) {
77330dcb7c9SBarry Smith         nprocs[i] += 2 + nownedsenders[node];
77430dcb7c9SBarry Smith       }
77530dcb7c9SBarry Smith     }
77630dcb7c9SBarry Smith   }
77730dcb7c9SBarry Smith   nt = 0; for (i=0; i<nsends2; i++) nt += nprocs[i];
77832dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),&sends2);CHKERRQ(ierr);
77932dcc486SBarry Smith   ierr = PetscMalloc((nsends2+1)*sizeof(PetscInt),&starts2);CHKERRQ(ierr);
78030dcb7c9SBarry Smith   starts2[0] = 0; for (i=1; i<nsends2; i++) starts2[i] = starts2[i-1] + nprocs[i-1];
78130dcb7c9SBarry Smith   /*
78230dcb7c9SBarry Smith      Each message is 1 + nprocs[i] long, and consists of
78330dcb7c9SBarry Smith        (0) the number of nodes being sent back
78430dcb7c9SBarry Smith        (1) the local node number,
78530dcb7c9SBarry Smith        (2) the number of processors sharing it,
78630dcb7c9SBarry Smith        (3) the processors sharing it
78730dcb7c9SBarry Smith   */
78830dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
78930dcb7c9SBarry Smith     cnt = 1;
79030dcb7c9SBarry Smith     sends2[starts2[i]] = 0;
79130dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
79230dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
79330dcb7c9SBarry Smith       if (nownedsenders[node] > 1) {
79430dcb7c9SBarry Smith         sends2[starts2[i]]++;
79530dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = recvs[2*i*nmax+2*j+1];
79630dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = nownedsenders[node];
79732dcc486SBarry Smith         ierr = PetscMemcpy(&sends2[starts2[i]+cnt],&ownedsenders[starts[node]],nownedsenders[node]*sizeof(PetscInt));CHKERRQ(ierr);
79830dcb7c9SBarry Smith         cnt += nownedsenders[node];
79930dcb7c9SBarry Smith       }
80030dcb7c9SBarry Smith     }
80130dcb7c9SBarry Smith   }
80230dcb7c9SBarry Smith 
80330dcb7c9SBarry Smith   /* receive the message lengths */
80430dcb7c9SBarry Smith   nrecvs2 = nsends;
80532dcc486SBarry Smith   ierr = PetscMalloc((nrecvs2+1)*sizeof(PetscInt),&lens2);CHKERRQ(ierr);
80632dcc486SBarry Smith   ierr = PetscMalloc((nrecvs2+1)*sizeof(PetscInt),&starts3);CHKERRQ(ierr);
807d44834fbSBarry Smith   ierr = PetscMalloc((nrecvs2+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
80830dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
809d44834fbSBarry Smith     ierr = MPI_Irecv(&lens2[i],1,MPIU_INT,dest[i],tag2,comm,recv_waits+i);CHKERRQ(ierr);
81030dcb7c9SBarry Smith   }
811d44834fbSBarry Smith 
8128a8e0b3aSBarry Smith   /* send the message lengths */
8138a8e0b3aSBarry Smith   for (i=0; i<nsends2; i++) {
8148a8e0b3aSBarry Smith     ierr = MPI_Send(&nprocs[i],1,MPIU_INT,source[i],tag2,comm);CHKERRQ(ierr);
8158a8e0b3aSBarry Smith   }
8168a8e0b3aSBarry Smith 
817d44834fbSBarry Smith   /* wait on receives of lens */
8180c468ba9SBarry Smith   if (nrecvs2) {
8190c468ba9SBarry Smith     ierr = PetscMalloc(nrecvs2*sizeof(MPI_Status),&recv_statuses);CHKERRQ(ierr);
820d44834fbSBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
821d44834fbSBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8220c468ba9SBarry Smith   }
823a2ea699eSBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
824d44834fbSBarry Smith 
82530dcb7c9SBarry Smith   starts3[0] = 0;
826d44834fbSBarry Smith   nt         = 0;
82730dcb7c9SBarry Smith   for (i=0; i<nrecvs2-1; i++) {
82830dcb7c9SBarry Smith     starts3[i+1] = starts3[i] + lens2[i];
829d44834fbSBarry Smith     nt          += lens2[i];
83030dcb7c9SBarry Smith   }
83176466f69SStefano Zampini   if (nrecvs2) nt += lens2[nrecvs2-1];
832d44834fbSBarry Smith 
83332dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),&recvs2);CHKERRQ(ierr);
834b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs2+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
83552b72c4aSBarry Smith   for (i=0; i<nrecvs2; i++) {
83632dcc486SBarry Smith     ierr = MPI_Irecv(recvs2+starts3[i],lens2[i],MPIU_INT,dest[i],tag3,comm,recv_waits+i);CHKERRQ(ierr);
83730dcb7c9SBarry Smith   }
83830dcb7c9SBarry Smith 
83930dcb7c9SBarry Smith   /* send the messages */
840b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends2+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
84130dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
84232dcc486SBarry Smith     ierr = MPI_Isend(sends2+starts2[i],nprocs[i],MPIU_INT,source[i],tag3,comm,send_waits+i);CHKERRQ(ierr);
84330dcb7c9SBarry Smith   }
84430dcb7c9SBarry Smith 
84530dcb7c9SBarry Smith   /* wait on receives */
8460c468ba9SBarry Smith   if (nrecvs2) {
8470c468ba9SBarry Smith     ierr = PetscMalloc(nrecvs2*sizeof(MPI_Status),&recv_statuses);CHKERRQ(ierr);
84830dcb7c9SBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
84930dcb7c9SBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8500c468ba9SBarry Smith   }
85130dcb7c9SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
85230dcb7c9SBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
85330dcb7c9SBarry Smith 
85407b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
85530dcb7c9SBarry Smith     cnt = 0;
85630dcb7c9SBarry Smith     for (i=0; i<nrecvs2; i++) {
85730dcb7c9SBarry Smith       nt = recvs2[cnt++];
85830dcb7c9SBarry Smith       for (j=0; j<nt; j++) {
85930dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] local node %d number of subdomains %d: ",rank,recvs2[cnt],recvs2[cnt+1]);CHKERRQ(ierr);
86030dcb7c9SBarry Smith         for (k=0; k<recvs2[cnt+1]; k++) {
86130dcb7c9SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%d ",recvs2[cnt+2+k]);CHKERRQ(ierr);
86230dcb7c9SBarry Smith         }
86330dcb7c9SBarry Smith         cnt += 2 + recvs2[cnt+1];
86430dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
86530dcb7c9SBarry Smith       }
86630dcb7c9SBarry Smith     }
86730dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
86807b52d57SBarry Smith   } /* -----------------------------------  */
86930dcb7c9SBarry Smith 
87030dcb7c9SBarry Smith   /* count number subdomains for each local node */
87132dcc486SBarry Smith   ierr = PetscMalloc(size*sizeof(PetscInt),&nprocs);CHKERRQ(ierr);
87232dcc486SBarry Smith   ierr = PetscMemzero(nprocs,size*sizeof(PetscInt));CHKERRQ(ierr);
87330dcb7c9SBarry Smith   cnt  = 0;
87430dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
87530dcb7c9SBarry Smith     nt = recvs2[cnt++];
87630dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
87730dcb7c9SBarry Smith       for (k=0; k<recvs2[cnt+1]; k++) {
87830dcb7c9SBarry Smith         nprocs[recvs2[cnt+2+k]]++;
87930dcb7c9SBarry Smith       }
88030dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
88130dcb7c9SBarry Smith     }
88230dcb7c9SBarry Smith   }
88330dcb7c9SBarry Smith   nt = 0; for (i=0; i<size; i++) nt += (nprocs[i] > 0);
88430dcb7c9SBarry Smith   *nproc    = nt;
88532dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),procs);CHKERRQ(ierr);
88632dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),numprocs);CHKERRQ(ierr);
88732dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt*),indices);CHKERRQ(ierr);
88876466f69SStefano Zampini   for (i=0;i<nt+1;i++) { (*indices)[i]=PETSC_NULL; }
88932dcc486SBarry Smith   ierr = PetscMalloc(size*sizeof(PetscInt),&bprocs);CHKERRQ(ierr);
89030dcb7c9SBarry Smith   cnt       = 0;
89130dcb7c9SBarry Smith   for (i=0; i<size; i++) {
89230dcb7c9SBarry Smith     if (nprocs[i] > 0) {
89330dcb7c9SBarry Smith       bprocs[i]        = cnt;
89430dcb7c9SBarry Smith       (*procs)[cnt]    = i;
89530dcb7c9SBarry Smith       (*numprocs)[cnt] = nprocs[i];
89632dcc486SBarry Smith       ierr             = PetscMalloc(nprocs[i]*sizeof(PetscInt),&(*indices)[cnt]);CHKERRQ(ierr);
89730dcb7c9SBarry Smith       cnt++;
89830dcb7c9SBarry Smith     }
89930dcb7c9SBarry Smith   }
90030dcb7c9SBarry Smith 
90130dcb7c9SBarry Smith   /* make the list of subdomains for each nontrivial local node */
90232dcc486SBarry Smith   ierr = PetscMemzero(*numprocs,nt*sizeof(PetscInt));CHKERRQ(ierr);
90330dcb7c9SBarry Smith   cnt  = 0;
90430dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
90530dcb7c9SBarry Smith     nt = recvs2[cnt++];
90630dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
90730dcb7c9SBarry Smith       for (k=0; k<recvs2[cnt+1]; k++) {
90830dcb7c9SBarry Smith         (*indices)[bprocs[recvs2[cnt+2+k]]][(*numprocs)[bprocs[recvs2[cnt+2+k]]]++] = recvs2[cnt];
90930dcb7c9SBarry Smith       }
91030dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
91130dcb7c9SBarry Smith     }
91230dcb7c9SBarry Smith   }
91330dcb7c9SBarry Smith   ierr = PetscFree(bprocs);CHKERRQ(ierr);
91407b52d57SBarry Smith   ierr = PetscFree(recvs2);CHKERRQ(ierr);
91530dcb7c9SBarry Smith 
91607b52d57SBarry Smith   /* sort the node indexing by their global numbers */
91707b52d57SBarry Smith   nt = *nproc;
91807b52d57SBarry Smith   for (i=0; i<nt; i++) {
91932dcc486SBarry Smith     ierr = PetscMalloc(((*numprocs)[i])*sizeof(PetscInt),&tmp);CHKERRQ(ierr);
92007b52d57SBarry Smith     for (j=0; j<(*numprocs)[i]; j++) {
92107b52d57SBarry Smith       tmp[j] = lindices[(*indices)[i][j]];
92207b52d57SBarry Smith     }
92307b52d57SBarry Smith     ierr = PetscSortIntWithArray((*numprocs)[i],tmp,(*indices)[i]);CHKERRQ(ierr);
92407b52d57SBarry Smith     ierr = PetscFree(tmp);CHKERRQ(ierr);
92507b52d57SBarry Smith   }
92607b52d57SBarry Smith 
92707b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
92830dcb7c9SBarry Smith     nt = *nproc;
92930dcb7c9SBarry Smith     for (i=0; i<nt; i++) {
93030dcb7c9SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"[%d] subdomain %d number of indices %d: ",rank,(*procs)[i],(*numprocs)[i]);CHKERRQ(ierr);
93130dcb7c9SBarry Smith       for (j=0; j<(*numprocs)[i]; j++) {
93230dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"%d ",(*indices)[i][j]);CHKERRQ(ierr);
93330dcb7c9SBarry Smith       }
93430dcb7c9SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
93530dcb7c9SBarry Smith     }
93630dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
93707b52d57SBarry Smith   } /* -----------------------------------  */
93830dcb7c9SBarry Smith 
93930dcb7c9SBarry Smith   /* wait on sends */
94030dcb7c9SBarry Smith   if (nsends2) {
941b0a32e0cSBarry Smith     ierr = PetscMalloc(nsends2*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
94230dcb7c9SBarry Smith     ierr = MPI_Waitall(nsends2,send_waits,send_status);CHKERRQ(ierr);
94330dcb7c9SBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
94430dcb7c9SBarry Smith   }
94530dcb7c9SBarry Smith 
94630dcb7c9SBarry Smith   ierr = PetscFree(starts3);CHKERRQ(ierr);
94730dcb7c9SBarry Smith   ierr = PetscFree(dest);CHKERRQ(ierr);
94830dcb7c9SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
9493677ff5aSBarry Smith 
950bc8ff85bSBarry Smith   ierr = PetscFree(nownedsenders);CHKERRQ(ierr);
951bc8ff85bSBarry Smith   ierr = PetscFree(ownedsenders);CHKERRQ(ierr);
952bc8ff85bSBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
95330dcb7c9SBarry Smith   ierr = PetscFree(starts2);CHKERRQ(ierr);
95430dcb7c9SBarry Smith   ierr = PetscFree(lens2);CHKERRQ(ierr);
95589d82c54SBarry Smith 
95689d82c54SBarry Smith   ierr = PetscFree(source);CHKERRQ(ierr);
95797f1f81fSBarry Smith   ierr = PetscFree(len);CHKERRQ(ierr);
95889d82c54SBarry Smith   ierr = PetscFree(recvs);CHKERRQ(ierr);
9593a96401aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
96030dcb7c9SBarry Smith   ierr = PetscFree(sends2);CHKERRQ(ierr);
96124cf384cSBarry Smith 
96224cf384cSBarry Smith   /* put the information about myself as the first entry in the list */
96324cf384cSBarry Smith   first_procs    = (*procs)[0];
96424cf384cSBarry Smith   first_numprocs = (*numprocs)[0];
96524cf384cSBarry Smith   first_indices  = (*indices)[0];
96624cf384cSBarry Smith   for (i=0; i<*nproc; i++) {
96724cf384cSBarry Smith     if ((*procs)[i] == rank) {
96824cf384cSBarry Smith       (*procs)[0]    = (*procs)[i];
96924cf384cSBarry Smith       (*numprocs)[0] = (*numprocs)[i];
97024cf384cSBarry Smith       (*indices)[0]  = (*indices)[i];
97124cf384cSBarry Smith       (*procs)[i]    = first_procs;
97224cf384cSBarry Smith       (*numprocs)[i] = first_numprocs;
97324cf384cSBarry Smith       (*indices)[i]  = first_indices;
97424cf384cSBarry Smith       break;
97524cf384cSBarry Smith     }
97624cf384cSBarry Smith   }
97789d82c54SBarry Smith   PetscFunctionReturn(0);
97889d82c54SBarry Smith }
97989d82c54SBarry Smith 
9804a2ae208SSatish Balay #undef __FUNCT__
9814a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingRestoreInfo"
98207b52d57SBarry Smith /*@C
98307b52d57SBarry Smith     ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by ISLocalToGlobalMappingGetInfo()
98489d82c54SBarry Smith 
98507b52d57SBarry Smith     Collective on ISLocalToGlobalMapping
98607b52d57SBarry Smith 
98707b52d57SBarry Smith     Input Parameters:
98807b52d57SBarry Smith .   mapping - the mapping from local to global indexing
98907b52d57SBarry Smith 
99007b52d57SBarry Smith     Output Parameter:
99107b52d57SBarry Smith +   nproc - number of processors that are connected to this one
99207b52d57SBarry Smith .   proc - neighboring processors
99307b52d57SBarry Smith .   numproc - number of indices for each processor
99407b52d57SBarry Smith -   indices - indices of local nodes shared with neighbor (sorted by global numbering)
99507b52d57SBarry Smith 
99607b52d57SBarry Smith     Level: advanced
99707b52d57SBarry Smith 
99807b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
99907b52d57SBarry Smith           ISLocalToGlobalMappingGetInfo()
100007b52d57SBarry Smith @*/
10017087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
100207b52d57SBarry Smith {
10036849ba73SBarry Smith   PetscErrorCode ierr;
100432dcc486SBarry Smith   PetscInt       i;
100507b52d57SBarry Smith 
100607b52d57SBarry Smith   PetscFunctionBegin;
100705b42c5fSBarry Smith   ierr = PetscFree(*procs);CHKERRQ(ierr);
100805b42c5fSBarry Smith   ierr = PetscFree(*numprocs);CHKERRQ(ierr);
100900ff320aSBarry Smith   if (*indices) {
101005b42c5fSBarry Smith     ierr = PetscFree((*indices)[0]);CHKERRQ(ierr);
101100ff320aSBarry Smith     for (i=1; i<*nproc; i++) {
101205b42c5fSBarry Smith       ierr = PetscFree((*indices)[i]);CHKERRQ(ierr);
101307b52d57SBarry Smith     }
101407b52d57SBarry Smith     ierr = PetscFree(*indices);CHKERRQ(ierr);
101524cf384cSBarry Smith   }
101607b52d57SBarry Smith   PetscFunctionReturn(0);
101707b52d57SBarry Smith }
101886994e45SJed Brown 
101986994e45SJed Brown #undef __FUNCT__
102086994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingGetIndices"
102186994e45SJed Brown /*@C
102286994e45SJed Brown    ISLocalToGlobalMappingGetIndices - Get global indices for every local point
102386994e45SJed Brown 
102486994e45SJed Brown    Not Collective
102586994e45SJed Brown 
102686994e45SJed Brown    Input Arguments:
102786994e45SJed Brown . ltog - local to global mapping
102886994e45SJed Brown 
102986994e45SJed Brown    Output Arguments:
103086994e45SJed Brown . array - array of indices
103186994e45SJed Brown 
103286994e45SJed Brown    Level: advanced
103386994e45SJed Brown 
103486994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreIndices()
103586994e45SJed Brown @*/
10367087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
103786994e45SJed Brown {
103886994e45SJed Brown 
103986994e45SJed Brown   PetscFunctionBegin;
104086994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
104186994e45SJed Brown   PetscValidPointer(array,2);
104286994e45SJed Brown   *array = ltog->indices;
104386994e45SJed Brown   PetscFunctionReturn(0);
104486994e45SJed Brown }
104586994e45SJed Brown 
104686994e45SJed Brown #undef __FUNCT__
104786994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingRestoreIndices"
104886994e45SJed Brown /*@C
104986994e45SJed Brown    ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with ISLocalToGlobalMappingRestoreIndices()
105086994e45SJed Brown 
105186994e45SJed Brown    Not Collective
105286994e45SJed Brown 
105386994e45SJed Brown    Input Arguments:
105486994e45SJed Brown + ltog - local to global mapping
105586994e45SJed Brown - array - array of indices
105686994e45SJed Brown 
105786994e45SJed Brown    Level: advanced
105886994e45SJed Brown 
105986994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices()
106086994e45SJed Brown @*/
10617087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
106286994e45SJed Brown {
106386994e45SJed Brown 
106486994e45SJed Brown   PetscFunctionBegin;
106586994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
106686994e45SJed Brown   PetscValidPointer(array,2);
106786994e45SJed Brown   if (*array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer");
106886994e45SJed Brown   *array = PETSC_NULL;
106986994e45SJed Brown   PetscFunctionReturn(0);
107086994e45SJed Brown }
1071f7efa3c7SJed Brown 
1072f7efa3c7SJed Brown #undef __FUNCT__
1073f7efa3c7SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingConcatenate"
1074f7efa3c7SJed Brown /*@C
1075f7efa3c7SJed Brown    ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings
1076f7efa3c7SJed Brown 
1077f7efa3c7SJed Brown    Not Collective
1078f7efa3c7SJed Brown 
1079f7efa3c7SJed Brown    Input Arguments:
1080f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate
1081f7efa3c7SJed Brown . n - number of mappings to concatenate
1082f7efa3c7SJed Brown - ltogs - local to global mappings
1083f7efa3c7SJed Brown 
1084f7efa3c7SJed Brown    Output Arguments:
1085f7efa3c7SJed Brown . ltogcat - new mapping
1086f7efa3c7SJed Brown 
1087f7efa3c7SJed Brown    Level: advanced
1088f7efa3c7SJed Brown 
1089f7efa3c7SJed Brown .seealso: ISLocalToGlobalMappingCreate()
1090f7efa3c7SJed Brown @*/
1091f7efa3c7SJed Brown PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm,PetscInt n,const ISLocalToGlobalMapping ltogs[],ISLocalToGlobalMapping *ltogcat)
1092f7efa3c7SJed Brown {
1093f7efa3c7SJed Brown   PetscInt       i,cnt,m,*idx;
1094f7efa3c7SJed Brown   PetscErrorCode ierr;
1095f7efa3c7SJed Brown 
1096f7efa3c7SJed Brown   PetscFunctionBegin;
1097f7efa3c7SJed Brown   if (n < 0) SETERRQ1(comm,PETSC_ERR_ARG_OUTOFRANGE,"Must have a non-negative number of mappings, given %D",n);
1098f7efa3c7SJed Brown   if (n > 0) PetscValidPointer(ltogs,3);
1099f7efa3c7SJed Brown   for (i=0; i<n; i++) PetscValidHeaderSpecific(ltogs[i],IS_LTOGM_CLASSID,3);
1100f7efa3c7SJed Brown   PetscValidPointer(ltogcat,4);
1101f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1102f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1103f7efa3c7SJed Brown     cnt += m;
1104f7efa3c7SJed Brown   }
1105f7efa3c7SJed Brown   ierr = PetscMalloc(cnt*sizeof(PetscInt),&idx);CHKERRQ(ierr);
1106f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1107f7efa3c7SJed Brown     const PetscInt *subidx;
1108f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1109f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1110f7efa3c7SJed Brown     ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr);
1111f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1112f7efa3c7SJed Brown     cnt += m;
1113f7efa3c7SJed Brown   }
1114f7efa3c7SJed Brown   ierr = ISLocalToGlobalMappingCreate(comm,cnt,idx,PETSC_OWN_POINTER,ltogcat);CHKERRQ(ierr);
1115f7efa3c7SJed Brown   PetscFunctionReturn(0);
1116f7efa3c7SJed Brown }
1117