xref: /petsc/src/vec/is/utils/isltog.c (revision f6e5521d3750b26fd5ddb3be4390fdb36f2b5fb2)
12362add9SBarry Smith 
2b45d2f2cSJed Brown #include <petsc-private/isimpl.h>    /*I "petscis.h"  I*/
32362add9SBarry Smith 
47087cfbeSBarry Smith PetscClassId IS_LTOGM_CLASSID;
58e58c17dSMatthew Knepley 
64a2ae208SSatish Balay #undef __FUNCT__
74a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetSize"
83b9aefa3SBarry Smith /*@C
93b9aefa3SBarry Smith     ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping.
103b9aefa3SBarry Smith 
113b9aefa3SBarry Smith     Not Collective
123b9aefa3SBarry Smith 
133b9aefa3SBarry Smith     Input Parameter:
143b9aefa3SBarry Smith .   ltog - local to global mapping
153b9aefa3SBarry Smith 
163b9aefa3SBarry Smith     Output Parameter:
173b9aefa3SBarry Smith .   n - the number of entries in the local mapping
183b9aefa3SBarry Smith 
193b9aefa3SBarry Smith     Level: advanced
203b9aefa3SBarry Smith 
21273d9f13SBarry Smith     Concepts: mapping^local to global
223b9aefa3SBarry Smith 
233b9aefa3SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
243b9aefa3SBarry Smith @*/
257087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping,PetscInt *n)
263b9aefa3SBarry Smith {
273b9aefa3SBarry Smith   PetscFunctionBegin;
280700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
294482741eSBarry Smith   PetscValidIntPointer(n,2);
303b9aefa3SBarry Smith   *n = mapping->n;
313b9aefa3SBarry Smith   PetscFunctionReturn(0);
323b9aefa3SBarry Smith }
333b9aefa3SBarry Smith 
344a2ae208SSatish Balay #undef __FUNCT__
354a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingView"
365a5d4f66SBarry Smith /*@C
375a5d4f66SBarry Smith     ISLocalToGlobalMappingView - View a local to global mapping
385a5d4f66SBarry Smith 
39b9cd556bSLois Curfman McInnes     Not Collective
40b9cd556bSLois Curfman McInnes 
415a5d4f66SBarry Smith     Input Parameters:
423b9aefa3SBarry Smith +   ltog - local to global mapping
433b9aefa3SBarry Smith -   viewer - viewer
445a5d4f66SBarry Smith 
45a997ad1aSLois Curfman McInnes     Level: advanced
46a997ad1aSLois Curfman McInnes 
47273d9f13SBarry Smith     Concepts: mapping^local to global
485a5d4f66SBarry Smith 
495a5d4f66SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
505a5d4f66SBarry Smith @*/
517087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping,PetscViewer viewer)
525a5d4f66SBarry Smith {
5332dcc486SBarry Smith   PetscInt       i;
5432dcc486SBarry Smith   PetscMPIInt    rank;
55ace3abfcSBarry Smith   PetscBool      iascii;
566849ba73SBarry Smith   PetscErrorCode ierr;
575a5d4f66SBarry Smith 
585a5d4f66SBarry Smith   PetscFunctionBegin;
590700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
603050cee2SBarry Smith   if (!viewer) {
617adad957SLisandro Dalcin     ierr = PetscViewerASCIIGetStdout(((PetscObject)mapping)->comm,&viewer);CHKERRQ(ierr);
623050cee2SBarry Smith   }
630700a824SBarry Smith   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
645a5d4f66SBarry Smith 
657adad957SLisandro Dalcin   ierr = MPI_Comm_rank(((PetscObject)mapping)->comm,&rank);CHKERRQ(ierr);
66251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
6732077d6dSBarry Smith   if (iascii) {
687b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_TRUE);CHKERRQ(ierr);
695a5d4f66SBarry Smith     for (i=0; i<mapping->n; i++) {
70b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] %d %d\n",rank,i,mapping->indices[i]);CHKERRQ(ierr);
716831982aSBarry Smith     }
72b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
737b23a99aSBarry Smith     ierr = PetscViewerASCIISynchronizedAllow(viewer,PETSC_FALSE);CHKERRQ(ierr);
747b23a99aSBarry Smith   } else SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Viewer type %s not supported for ISLocalToGlobalMapping",((PetscObject)viewer)->type_name);
755a5d4f66SBarry Smith   PetscFunctionReturn(0);
765a5d4f66SBarry Smith }
775a5d4f66SBarry Smith 
784a2ae208SSatish Balay #undef __FUNCT__
794a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreateIS"
801f428162SBarry Smith /*@
812bdab257SBarry Smith     ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n)
822bdab257SBarry Smith     ordering and a global parallel ordering.
832bdab257SBarry Smith 
840f5bd95cSBarry Smith     Not collective
85b9cd556bSLois Curfman McInnes 
86a997ad1aSLois Curfman McInnes     Input Parameter:
878c03b21aSDmitry Karpeev .   is - index set containing the global numbers for each local number
882bdab257SBarry Smith 
89a997ad1aSLois Curfman McInnes     Output Parameter:
902bdab257SBarry Smith .   mapping - new mapping data structure
912bdab257SBarry Smith 
92a997ad1aSLois Curfman McInnes     Level: advanced
93a997ad1aSLois Curfman McInnes 
94273d9f13SBarry Smith     Concepts: mapping^local to global
952bdab257SBarry Smith 
962bdab257SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate()
972bdab257SBarry Smith @*/
987087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreateIS(IS is,ISLocalToGlobalMapping *mapping)
992bdab257SBarry Smith {
1006849ba73SBarry Smith   PetscErrorCode ierr;
1015d0c19d7SBarry Smith   PetscInt       n;
1025d0c19d7SBarry Smith   const PetscInt *indices;
1032bdab257SBarry Smith   MPI_Comm       comm;
1043a40ed3dSBarry Smith 
1053a40ed3dSBarry Smith   PetscFunctionBegin;
1060700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,1);
1074482741eSBarry Smith   PetscValidPointer(mapping,2);
1082bdab257SBarry Smith 
1092bdab257SBarry Smith   ierr = PetscObjectGetComm((PetscObject)is,&comm);CHKERRQ(ierr);
1103b9aefa3SBarry Smith   ierr = ISGetLocalSize(is,&n);CHKERRQ(ierr);
1112bdab257SBarry Smith   ierr = ISGetIndices(is,&indices);CHKERRQ(ierr);
112d5ad8652SBarry Smith   ierr = ISLocalToGlobalMappingCreate(comm,n,indices,PETSC_COPY_VALUES,mapping);CHKERRQ(ierr);
1132bdab257SBarry Smith   ierr = ISRestoreIndices(is,&indices);CHKERRQ(ierr);
1143a40ed3dSBarry Smith   PetscFunctionReturn(0);
1152bdab257SBarry Smith }
1165a5d4f66SBarry Smith 
117a4d96a55SJed Brown #undef __FUNCT__
118a4d96a55SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingCreateSF"
119a4d96a55SJed Brown /*@C
120a4d96a55SJed Brown     ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n)
121a4d96a55SJed Brown     ordering and a global parallel ordering.
122a4d96a55SJed Brown 
123a4d96a55SJed Brown     Collective
124a4d96a55SJed Brown 
125a4d96a55SJed Brown     Input Parameter:
126a4d96a55SJed Brown +   sf - star forest mapping contiguous local indices to (rank, offset)
127a4d96a55SJed Brown -   start - first global index on this process
128a4d96a55SJed Brown 
129a4d96a55SJed Brown     Output Parameter:
130a4d96a55SJed Brown .   mapping - new mapping data structure
131a4d96a55SJed Brown 
132a4d96a55SJed Brown     Level: advanced
133a4d96a55SJed Brown 
134a4d96a55SJed Brown     Concepts: mapping^local to global
135a4d96a55SJed Brown 
136a4d96a55SJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS()
137a4d96a55SJed Brown @*/
138a4d96a55SJed Brown PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf,PetscInt start,ISLocalToGlobalMapping *mapping)
139a4d96a55SJed Brown {
140a4d96a55SJed Brown   PetscErrorCode ierr;
141a4d96a55SJed Brown   PetscInt       i,maxlocal,nroots,nleaves,*globals,*ltog;
142a4d96a55SJed Brown   const PetscInt *ilocal;
143a4d96a55SJed Brown   MPI_Comm       comm;
144a4d96a55SJed Brown 
145a4d96a55SJed Brown   PetscFunctionBegin;
146a4d96a55SJed Brown   PetscValidHeaderSpecific(sf,PETSCSF_CLASSID,1);
147a4d96a55SJed Brown   PetscValidPointer(mapping,3);
148a4d96a55SJed Brown 
149a4d96a55SJed Brown   ierr = PetscObjectGetComm((PetscObject)sf,&comm);CHKERRQ(ierr);
150a4d96a55SJed Brown   ierr = PetscSFGetGraph(sf,&nroots,&nleaves,&ilocal,PETSC_NULL);CHKERRQ(ierr);
151*f6e5521dSKarl Rupp   if (ilocal) {
152*f6e5521dSKarl Rupp     for (i=0,maxlocal=0; i<nleaves; i++) maxlocal = PetscMax(maxlocal,ilocal[i]+1);
153*f6e5521dSKarl Rupp   }
154a4d96a55SJed Brown   else maxlocal = nleaves;
155a4d96a55SJed Brown   ierr = PetscMalloc(nroots*sizeof(PetscInt),&globals);CHKERRQ(ierr);
156a4d96a55SJed Brown   ierr = PetscMalloc(maxlocal*sizeof(PetscInt),&ltog);CHKERRQ(ierr);
157a4d96a55SJed Brown   for (i=0; i<nroots; i++) globals[i] = start + i;
158a4d96a55SJed Brown   for (i=0; i<maxlocal; i++) ltog[i] = -1;
159a4d96a55SJed Brown   ierr = PetscSFBcastBegin(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
160a4d96a55SJed Brown   ierr = PetscSFBcastEnd(sf,MPIU_INT,globals,ltog);CHKERRQ(ierr);
161a4d96a55SJed Brown   ierr = ISLocalToGlobalMappingCreate(comm,maxlocal,ltog,PETSC_OWN_POINTER,mapping);CHKERRQ(ierr);
162a4d96a55SJed Brown   ierr = PetscFree(globals);CHKERRQ(ierr);
163a4d96a55SJed Brown   PetscFunctionReturn(0);
164a4d96a55SJed Brown }
165b46b645bSBarry Smith 
1664a2ae208SSatish Balay #undef __FUNCT__
1674a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingCreate"
168ba5bb76aSSatish Balay /*@
16990f02eecSBarry Smith     ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n)
17090f02eecSBarry Smith     ordering and a global parallel ordering.
1712362add9SBarry Smith 
17289d82c54SBarry Smith     Not Collective, but communicator may have more than one process
173b9cd556bSLois Curfman McInnes 
1742362add9SBarry Smith     Input Parameters:
17589d82c54SBarry Smith +   comm - MPI communicator
17690f02eecSBarry Smith .   n - the number of local elements
1779669e4d8SBarry Smith .   indices - the global index for each local element, these do not need to be in increasing order (sorted)
178d5ad8652SBarry Smith -   mode - see PetscCopyMode
1792362add9SBarry Smith 
180a997ad1aSLois Curfman McInnes     Output Parameter:
18190f02eecSBarry Smith .   mapping - new mapping data structure
1822362add9SBarry Smith 
183a997ad1aSLois Curfman McInnes     Level: advanced
184a997ad1aSLois Curfman McInnes 
185273d9f13SBarry Smith     Concepts: mapping^local to global
1862362add9SBarry Smith 
187d5ad8652SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS()
1882362add9SBarry Smith @*/
1897087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingCreate(MPI_Comm cm,PetscInt n,const PetscInt indices[],PetscCopyMode mode,ISLocalToGlobalMapping *mapping)
1902362add9SBarry Smith {
1916849ba73SBarry Smith   PetscErrorCode ierr;
19232dcc486SBarry Smith   PetscInt       *in;
193b46b645bSBarry Smith 
194b46b645bSBarry Smith   PetscFunctionBegin;
19573911063SBarry Smith   if (n) PetscValidIntPointer(indices,3);
1964482741eSBarry Smith   PetscValidPointer(mapping,4);
197b46b645bSBarry Smith 
1988e58c17dSMatthew Knepley   *mapping = PETSC_NULL;
199519f805aSKarl Rupp #if !defined(PETSC_USE_DYNAMIC_LIBRARIES)
2002b6de112SBarry Smith   ierr = ISInitializePackage(PETSC_NULL);CHKERRQ(ierr);
2018e58c17dSMatthew Knepley #endif
2022362add9SBarry Smith 
2033194b578SJed Brown   ierr = PetscHeaderCreate(*mapping,_p_ISLocalToGlobalMapping,int,IS_LTOGM_CLASSID,0,"ISLocalToGlobalMapping","Local to global mapping","IS",
20452e6d16bSBarry Smith                            cm,ISLocalToGlobalMappingDestroy,ISLocalToGlobalMappingView);CHKERRQ(ierr);
205d4bb536fSBarry Smith   (*mapping)->n = n;
206d4bb536fSBarry Smith   /*
207d4bb536fSBarry Smith     Do not create the global to local mapping. This is only created if
208d4bb536fSBarry Smith     ISGlobalToLocalMapping() is called
209d4bb536fSBarry Smith   */
210d4bb536fSBarry Smith   (*mapping)->globals = 0;
211d5ad8652SBarry Smith   if (mode == PETSC_COPY_VALUES) {
212d5ad8652SBarry Smith     ierr = PetscMalloc(n*sizeof(PetscInt),&in);CHKERRQ(ierr);
213d5ad8652SBarry Smith     ierr = PetscMemcpy(in,indices,n*sizeof(PetscInt));CHKERRQ(ierr);
214d5ad8652SBarry Smith     ierr = PetscLogObjectMemory(*mapping,n*sizeof(PetscInt));CHKERRQ(ierr);
215d5ad8652SBarry Smith     (*mapping)->indices = in;
216*f6e5521dSKarl Rupp   } else if (mode == PETSC_OWN_POINTER) (*mapping)->indices = (PetscInt*)indices;
217*f6e5521dSKarl Rupp   else SETERRQ(cm,PETSC_ERR_SUP,"Cannot currently use PETSC_USE_POINTER");
2183a40ed3dSBarry Smith   PetscFunctionReturn(0);
2192362add9SBarry Smith }
2202362add9SBarry Smith 
2214a2ae208SSatish Balay #undef __FUNCT__
2224a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingBlock"
223bce096a4SSatish Balay /*@
224323b833fSBarry Smith     ISLocalToGlobalMappingBlock - Creates a blocked index version of an
225323b833fSBarry Smith        ISLocalToGlobalMapping that is appropriate for MatSetLocalToGlobalMappingBlock()
226323b833fSBarry Smith        and VecSetLocalToGlobalMappingBlock().
227323b833fSBarry Smith 
228323b833fSBarry Smith     Not Collective, but communicator may have more than one process
229323b833fSBarry Smith 
230323b833fSBarry Smith     Input Parameters:
231323b833fSBarry Smith +    inmap - original point-wise mapping
232323b833fSBarry Smith -    bs - block size
233323b833fSBarry Smith 
234323b833fSBarry Smith     Output Parameter:
23569eb54c3SBarry Smith .   outmap - block based mapping; the indices are relative to BLOCKS, not individual vector or matrix entries.
236323b833fSBarry Smith 
237323b833fSBarry Smith     Level: advanced
238323b833fSBarry Smith 
239323b833fSBarry Smith     Concepts: mapping^local to global
240323b833fSBarry Smith 
241323b833fSBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingCreateIS()
242323b833fSBarry Smith @*/
2437087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingBlock(ISLocalToGlobalMapping inmap,PetscInt bs,ISLocalToGlobalMapping *outmap)
244323b833fSBarry Smith {
2456849ba73SBarry Smith   PetscErrorCode ierr;
24632dcc486SBarry Smith   PetscInt       *ii,i,n;
247323b833fSBarry Smith 
248323b833fSBarry Smith   PetscFunctionBegin;
2490700a824SBarry Smith   PetscValidHeaderSpecific(inmap,IS_LTOGM_CLASSID,1);
250b2beed0aSJed Brown   PetscValidPointer(outmap,3);
251323b833fSBarry Smith   if (bs > 1) {
252323b833fSBarry Smith     n = inmap->n/bs;
253e32f2f54SBarry Smith     if (n*bs != inmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Pointwise mapping length is not divisible by block size");
25432dcc486SBarry Smith     ierr = PetscMalloc(n*sizeof(PetscInt),&ii);CHKERRQ(ierr);
255*f6e5521dSKarl Rupp     for (i=0; i<n; i++) ii[i] = inmap->indices[bs*i]/bs;
256d5ad8652SBarry Smith     ierr = ISLocalToGlobalMappingCreate(((PetscObject)inmap)->comm,n,ii,PETSC_OWN_POINTER,outmap);CHKERRQ(ierr);
257323b833fSBarry Smith   } else {
258323b833fSBarry Smith     ierr    = PetscObjectReference((PetscObject)inmap);CHKERRQ(ierr);
259c3122656SLisandro Dalcin     *outmap = inmap;
260323b833fSBarry Smith   }
261323b833fSBarry Smith   PetscFunctionReturn(0);
262323b833fSBarry Smith }
263323b833fSBarry Smith 
2644a2ae208SSatish Balay #undef __FUNCT__
2658ab951edSJed Brown #define __FUNCT__ "ISLocalToGlobalMappingUnBlock"
266b2beed0aSJed Brown /*@
267b2beed0aSJed Brown     ISLocalToGlobalMappingUnBlock - Creates a scalar index version of a blocked
268b2beed0aSJed Brown        ISLocalToGlobalMapping
269b2beed0aSJed Brown 
270b2beed0aSJed Brown     Not Collective, but communicator may have more than one process
271b2beed0aSJed Brown 
272b2beed0aSJed Brown     Input Parameter:
273b2beed0aSJed Brown + inmap - block based mapping; the indices are relative to BLOCKS, not individual vector or matrix entries.
274b2beed0aSJed Brown - bs - block size
275b2beed0aSJed Brown 
276b2beed0aSJed Brown     Output Parameter:
277b2beed0aSJed Brown .   outmap - pointwise mapping
278b2beed0aSJed Brown 
279b2beed0aSJed Brown     Level: advanced
280b2beed0aSJed Brown 
281b2beed0aSJed Brown     Concepts: mapping^local to global
282b2beed0aSJed Brown 
283b2beed0aSJed Brown .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingBlock()
284b2beed0aSJed Brown @*/
2857087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingUnBlock(ISLocalToGlobalMapping inmap,PetscInt bs,ISLocalToGlobalMapping *outmap)
286b2beed0aSJed Brown {
287b2beed0aSJed Brown   PetscErrorCode ierr;
288b2beed0aSJed Brown   PetscInt       *ii,i,n;
289b2beed0aSJed Brown 
290b2beed0aSJed Brown   PetscFunctionBegin;
291b2beed0aSJed Brown   PetscValidHeaderSpecific(inmap,IS_LTOGM_CLASSID,1);
292b2beed0aSJed Brown   PetscValidPointer(outmap,2);
293b2beed0aSJed Brown   if (bs > 1) {
294b2beed0aSJed Brown     n    = inmap->n*bs;
295b2beed0aSJed Brown     ierr = PetscMalloc(n*sizeof(PetscInt),&ii);CHKERRQ(ierr);
296*f6e5521dSKarl Rupp     for (i=0; i<n; i++) ii[i] = inmap->indices[i/bs]*bs + (i%bs);
297b2beed0aSJed Brown     ierr = ISLocalToGlobalMappingCreate(((PetscObject)inmap)->comm,n,ii,PETSC_OWN_POINTER,outmap);CHKERRQ(ierr);
298b2beed0aSJed Brown   } else {
299b2beed0aSJed Brown     ierr    = PetscObjectReference((PetscObject)inmap);CHKERRQ(ierr);
300b2beed0aSJed Brown     *outmap = inmap;
301b2beed0aSJed Brown   }
302b2beed0aSJed Brown   PetscFunctionReturn(0);
303b2beed0aSJed Brown }
304b2beed0aSJed Brown 
305b2beed0aSJed Brown #undef __FUNCT__
3064a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingDestroy"
30790f02eecSBarry Smith /*@
30890f02eecSBarry Smith    ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n)
30990f02eecSBarry Smith    ordering and a global parallel ordering.
31090f02eecSBarry Smith 
3110f5bd95cSBarry Smith    Note Collective
312b9cd556bSLois Curfman McInnes 
31390f02eecSBarry Smith    Input Parameters:
31490f02eecSBarry Smith .  mapping - mapping data structure
31590f02eecSBarry Smith 
316a997ad1aSLois Curfman McInnes    Level: advanced
317a997ad1aSLois Curfman McInnes 
3183acfe500SLois Curfman McInnes .seealso: ISLocalToGlobalMappingCreate()
31990f02eecSBarry Smith @*/
3206bf464f9SBarry Smith PetscErrorCode  ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping)
32190f02eecSBarry Smith {
322dfbe8321SBarry Smith   PetscErrorCode ierr;
3235fd66863SKarl Rupp 
3243a40ed3dSBarry Smith   PetscFunctionBegin;
3256bf464f9SBarry Smith   if (!*mapping) PetscFunctionReturn(0);
3266bf464f9SBarry Smith   PetscValidHeaderSpecific((*mapping),IS_LTOGM_CLASSID,1);
327997056adSBarry Smith   if (--((PetscObject)(*mapping))->refct > 0) {*mapping = 0;PetscFunctionReturn(0);}
3286bf464f9SBarry Smith   ierr     = PetscFree((*mapping)->indices);CHKERRQ(ierr);
3296bf464f9SBarry Smith   ierr     = PetscFree((*mapping)->globals);CHKERRQ(ierr);
330d38fa0fbSBarry Smith   ierr     = PetscHeaderDestroy(mapping);CHKERRQ(ierr);
331992144d0SBarry Smith   *mapping = 0;
3323a40ed3dSBarry Smith   PetscFunctionReturn(0);
33390f02eecSBarry Smith }
33490f02eecSBarry Smith 
3354a2ae208SSatish Balay #undef __FUNCT__
3364a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingApplyIS"
33790f02eecSBarry Smith /*@
3383acfe500SLois Curfman McInnes     ISLocalToGlobalMappingApplyIS - Creates from an IS in the local numbering
3393acfe500SLois Curfman McInnes     a new index set using the global numbering defined in an ISLocalToGlobalMapping
3403acfe500SLois Curfman McInnes     context.
34190f02eecSBarry Smith 
342b9cd556bSLois Curfman McInnes     Not collective
343b9cd556bSLois Curfman McInnes 
34490f02eecSBarry Smith     Input Parameters:
345b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
346b9cd556bSLois Curfman McInnes -   is - index set in local numbering
34790f02eecSBarry Smith 
34890f02eecSBarry Smith     Output Parameters:
34990f02eecSBarry Smith .   newis - index set in global numbering
35090f02eecSBarry Smith 
351a997ad1aSLois Curfman McInnes     Level: advanced
352a997ad1aSLois Curfman McInnes 
353273d9f13SBarry Smith     Concepts: mapping^local to global
3543acfe500SLois Curfman McInnes 
35590f02eecSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
356d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy(), ISGlobalToLocalMappingApply()
35790f02eecSBarry Smith @*/
3587087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping,IS is,IS *newis)
35990f02eecSBarry Smith {
3606849ba73SBarry Smith   PetscErrorCode ierr;
3615d0c19d7SBarry Smith   PetscInt       n,i,*idxmap,*idxout,Nmax = mapping->n;
3625d0c19d7SBarry Smith   const PetscInt *idxin;
3633a40ed3dSBarry Smith 
3643a40ed3dSBarry Smith   PetscFunctionBegin;
3650700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
3660700a824SBarry Smith   PetscValidHeaderSpecific(is,IS_CLASSID,2);
3674482741eSBarry Smith   PetscValidPointer(newis,3);
36890f02eecSBarry Smith 
3693b9aefa3SBarry Smith   ierr   = ISGetLocalSize(is,&n);CHKERRQ(ierr);
37090f02eecSBarry Smith   ierr   = ISGetIndices(is,&idxin);CHKERRQ(ierr);
37190f02eecSBarry Smith   idxmap = mapping->indices;
37290f02eecSBarry Smith 
3737c334f02SBarry Smith   ierr = PetscMalloc(n*sizeof(PetscInt),&idxout);CHKERRQ(ierr);
37490f02eecSBarry Smith   for (i=0; i<n; i++) {
375e32f2f54SBarry Smith     if (idxin[i] >= Nmax) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Local index %d too large %d (max) at %d",idxin[i],Nmax-1,i);
37690f02eecSBarry Smith     idxout[i] = idxmap[idxin[i]];
37790f02eecSBarry Smith   }
3783b9aefa3SBarry Smith   ierr = ISRestoreIndices(is,&idxin);CHKERRQ(ierr);
37970b3c8c7SBarry Smith   ierr = ISCreateGeneral(PETSC_COMM_SELF,n,idxout,PETSC_OWN_POINTER,newis);CHKERRQ(ierr);
3803a40ed3dSBarry Smith   PetscFunctionReturn(0);
38190f02eecSBarry Smith }
38290f02eecSBarry Smith 
38389d82c54SBarry Smith /*MC
3843acfe500SLois Curfman McInnes    ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering
3853acfe500SLois Curfman McInnes    and converts them to the global numbering.
38690f02eecSBarry Smith 
387eca87e8dSBarry Smith    Synopsis:
388f2ba6396SBarry Smith    #include "petscis.h"
389eca87e8dSBarry Smith    PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping,int N,int in[],int out[])
390eca87e8dSBarry Smith 
391b9cd556bSLois Curfman McInnes    Not collective
392b9cd556bSLois Curfman McInnes 
393bb25748dSBarry Smith    Input Parameters:
394b9cd556bSLois Curfman McInnes +  mapping - the local to global mapping context
395bb25748dSBarry Smith .  N - number of integers
396b9cd556bSLois Curfman McInnes -  in - input indices in local numbering
397bb25748dSBarry Smith 
398bb25748dSBarry Smith    Output Parameter:
399bb25748dSBarry Smith .  out - indices in global numbering
400bb25748dSBarry Smith 
401b9cd556bSLois Curfman McInnes    Notes:
402b9cd556bSLois Curfman McInnes    The in and out array parameters may be identical.
403d4bb536fSBarry Smith 
404a997ad1aSLois Curfman McInnes    Level: advanced
405a997ad1aSLois Curfman McInnes 
406bb25748dSBarry Smith .seealso: ISLocalToGlobalMappingCreate(),ISLocalToGlobalMappingDestroy(),
4070752156aSBarry Smith           ISLocalToGlobalMappingApplyIS(),AOCreateBasic(),AOApplicationToPetsc(),
408d4bb536fSBarry Smith           AOPetscToApplication(), ISGlobalToLocalMappingApply()
409bb25748dSBarry Smith 
410273d9f13SBarry Smith     Concepts: mapping^local to global
411d4bb536fSBarry Smith 
41289d82c54SBarry Smith M*/
413d4bb536fSBarry Smith 
414d4bb536fSBarry Smith /* -----------------------------------------------------------------------------------------*/
415d4bb536fSBarry Smith 
4164a2ae208SSatish Balay #undef __FUNCT__
4174a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingSetUp_Private"
418d4bb536fSBarry Smith /*
419d4bb536fSBarry Smith     Creates the global fields in the ISLocalToGlobalMapping structure
420d4bb536fSBarry Smith */
4216849ba73SBarry Smith static PetscErrorCode ISGlobalToLocalMappingSetUp_Private(ISLocalToGlobalMapping mapping)
422d4bb536fSBarry Smith {
4236849ba73SBarry Smith   PetscErrorCode ierr;
42432dcc486SBarry Smith   PetscInt       i,*idx = mapping->indices,n = mapping->n,end,start,*globals;
425d4bb536fSBarry Smith 
4263a40ed3dSBarry Smith   PetscFunctionBegin;
427d4bb536fSBarry Smith   end   = 0;
428ec268f7cSJed Brown   start = PETSC_MAX_INT;
429d4bb536fSBarry Smith 
430d4bb536fSBarry Smith   for (i=0; i<n; i++) {
431d4bb536fSBarry Smith     if (idx[i] < 0) continue;
432d4bb536fSBarry Smith     if (idx[i] < start) start = idx[i];
433d4bb536fSBarry Smith     if (idx[i] > end)   end   = idx[i];
434d4bb536fSBarry Smith   }
435d4bb536fSBarry Smith   if (start > end) {start = 0; end = -1;}
436d4bb536fSBarry Smith   mapping->globalstart = start;
437d4bb536fSBarry Smith   mapping->globalend   = end;
438d4bb536fSBarry Smith 
43932dcc486SBarry Smith   ierr             = PetscMalloc((end-start+2)*sizeof(PetscInt),&globals);CHKERRQ(ierr);
440b0a32e0cSBarry Smith   mapping->globals = globals;
441*f6e5521dSKarl Rupp   for (i=0; i<end-start+1; i++) globals[i] = -1;
442d4bb536fSBarry Smith   for (i=0; i<n; i++) {
443d4bb536fSBarry Smith     if (idx[i] < 0) continue;
444d4bb536fSBarry Smith     globals[idx[i] - start] = i;
445d4bb536fSBarry Smith   }
446d4bb536fSBarry Smith 
44752e6d16bSBarry Smith   ierr = PetscLogObjectMemory(mapping,(end-start+1)*sizeof(PetscInt));CHKERRQ(ierr);
4483a40ed3dSBarry Smith   PetscFunctionReturn(0);
449d4bb536fSBarry Smith }
450d4bb536fSBarry Smith 
4514a2ae208SSatish Balay #undef __FUNCT__
4524a2ae208SSatish Balay #define __FUNCT__ "ISGlobalToLocalMappingApply"
453d4bb536fSBarry Smith /*@
454a997ad1aSLois Curfman McInnes     ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers
455a997ad1aSLois Curfman McInnes     specified with a global numbering.
456d4bb536fSBarry Smith 
457b9cd556bSLois Curfman McInnes     Not collective
458b9cd556bSLois Curfman McInnes 
459d4bb536fSBarry Smith     Input Parameters:
460b9cd556bSLois Curfman McInnes +   mapping - mapping between local and global numbering
461d4bb536fSBarry Smith .   type - IS_GTOLM_MASK - replaces global indices with no local value with -1
462d4bb536fSBarry Smith            IS_GTOLM_DROP - drops the indices with no local value from the output list
463d4bb536fSBarry Smith .   n - number of global indices to map
464b9cd556bSLois Curfman McInnes -   idx - global indices to map
465d4bb536fSBarry Smith 
466d4bb536fSBarry Smith     Output Parameters:
467b9cd556bSLois Curfman McInnes +   nout - number of indices in output array (if type == IS_GTOLM_MASK then nout = n)
468b9cd556bSLois Curfman McInnes -   idxout - local index of each global index, one must pass in an array long enough
469e182c471SBarry Smith              to hold all the indices. You can call ISGlobalToLocalMappingApply() with
470e182c471SBarry Smith              idxout == PETSC_NULL to determine the required length (returned in nout)
471e182c471SBarry Smith              and then allocate the required space and call ISGlobalToLocalMappingApply()
472e182c471SBarry Smith              a second time to set the values.
473d4bb536fSBarry Smith 
474b9cd556bSLois Curfman McInnes     Notes:
475b9cd556bSLois Curfman McInnes     Either nout or idxout may be PETSC_NULL. idx and idxout may be identical.
476d4bb536fSBarry Smith 
4770f5bd95cSBarry Smith     This is not scalable in memory usage. Each processor requires O(Nglobal) size
4780f5bd95cSBarry Smith     array to compute these.
4790f5bd95cSBarry Smith 
480a997ad1aSLois Curfman McInnes     Level: advanced
481a997ad1aSLois Curfman McInnes 
48232fd6b96SBarry Smith     Developer Note: The manual page states that idx and idxout may be identical but the calling
48332fd6b96SBarry Smith        sequence declares idx as const so it cannot be the same as idxout.
48432fd6b96SBarry Smith 
485273d9f13SBarry Smith     Concepts: mapping^global to local
486d4bb536fSBarry Smith 
487d4bb536fSBarry Smith .seealso: ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingCreate(),
488d4bb536fSBarry Smith           ISLocalToGlobalMappingDestroy()
489d4bb536fSBarry Smith @*/
4907087cfbeSBarry Smith PetscErrorCode  ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping,ISGlobalToLocalMappingType type,
49132dcc486SBarry Smith                                   PetscInt n,const PetscInt idx[],PetscInt *nout,PetscInt idxout[])
492d4bb536fSBarry Smith {
49332dcc486SBarry Smith   PetscInt       i,*globals,nf = 0,tmp,start,end;
4946849ba73SBarry Smith   PetscErrorCode ierr;
495d4bb536fSBarry Smith 
4963a40ed3dSBarry Smith   PetscFunctionBegin;
4970700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
498d4bb536fSBarry Smith   if (!mapping->globals) {
499d4bb536fSBarry Smith     ierr = ISGlobalToLocalMappingSetUp_Private(mapping);CHKERRQ(ierr);
500d4bb536fSBarry Smith   }
501d4bb536fSBarry Smith   globals = mapping->globals;
502d4bb536fSBarry Smith   start   = mapping->globalstart;
503d4bb536fSBarry Smith   end     = mapping->globalend;
504d4bb536fSBarry Smith 
505d4bb536fSBarry Smith   if (type == IS_GTOLM_MASK) {
506d4bb536fSBarry Smith     if (idxout) {
507d4bb536fSBarry Smith       for (i=0; i<n; i++) {
508d4bb536fSBarry Smith         if (idx[i] < 0) idxout[i] = idx[i];
509d4bb536fSBarry Smith         else if (idx[i] < start) idxout[i] = -1;
510d4bb536fSBarry Smith         else if (idx[i] > end)   idxout[i] = -1;
511d4bb536fSBarry Smith         else                     idxout[i] = globals[idx[i] - start];
512d4bb536fSBarry Smith       }
513d4bb536fSBarry Smith     }
514d4bb536fSBarry Smith     if (nout) *nout = n;
515d4bb536fSBarry Smith   } else {
516d4bb536fSBarry Smith     if (idxout) {
517d4bb536fSBarry Smith       for (i=0; i<n; i++) {
518d4bb536fSBarry Smith         if (idx[i] < 0) continue;
519d4bb536fSBarry Smith         if (idx[i] < start) continue;
520d4bb536fSBarry Smith         if (idx[i] > end) continue;
521d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
522d4bb536fSBarry Smith         if (tmp < 0) continue;
523d4bb536fSBarry Smith         idxout[nf++] = tmp;
524d4bb536fSBarry Smith       }
525d4bb536fSBarry Smith     } else {
526d4bb536fSBarry Smith       for (i=0; i<n; i++) {
527d4bb536fSBarry Smith         if (idx[i] < 0) continue;
528d4bb536fSBarry Smith         if (idx[i] < start) continue;
529d4bb536fSBarry Smith         if (idx[i] > end) continue;
530d4bb536fSBarry Smith         tmp = globals[idx[i] - start];
531d4bb536fSBarry Smith         if (tmp < 0) continue;
532d4bb536fSBarry Smith         nf++;
533d4bb536fSBarry Smith       }
534d4bb536fSBarry Smith     }
535d4bb536fSBarry Smith     if (nout) *nout = nf;
536d4bb536fSBarry Smith   }
5373a40ed3dSBarry Smith   PetscFunctionReturn(0);
538d4bb536fSBarry Smith }
53990f02eecSBarry Smith 
5404a2ae208SSatish Balay #undef __FUNCT__
5414a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingGetInfo"
54289d82c54SBarry Smith /*@C
54389d82c54SBarry Smith     ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each processor and
54489d82c54SBarry Smith      each index shared by more than one processor
54589d82c54SBarry Smith 
54689d82c54SBarry Smith     Collective on ISLocalToGlobalMapping
54789d82c54SBarry Smith 
54889d82c54SBarry Smith     Input Parameters:
54989d82c54SBarry Smith .   mapping - the mapping from local to global indexing
55089d82c54SBarry Smith 
55189d82c54SBarry Smith     Output Parameter:
55289d82c54SBarry Smith +   nproc - number of processors that are connected to this one
55389d82c54SBarry Smith .   proc - neighboring processors
55407b52d57SBarry Smith .   numproc - number of indices for each subdomain (processor)
5553463a7baSJed Brown -   indices - indices of nodes (in local numbering) shared with neighbors (sorted by global numbering)
55689d82c54SBarry Smith 
55789d82c54SBarry Smith     Level: advanced
55889d82c54SBarry Smith 
559273d9f13SBarry Smith     Concepts: mapping^local to global
56089d82c54SBarry Smith 
5612cfcea29SBarry Smith     Fortran Usage:
5622cfcea29SBarry Smith $        ISLocalToGlobalMpngGetInfoSize(ISLocalToGlobalMapping,PetscInt nproc,PetscInt numprocmax,ierr) followed by
5632cfcea29SBarry Smith $        ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping,PetscInt nproc, PetscInt procs[nproc],PetscInt numprocs[nproc],
5642cfcea29SBarry Smith           PetscInt indices[nproc][numprocmax],ierr)
5652cfcea29SBarry Smith         There is no ISLocalToGlobalMappingRestoreInfo() in Fortran. You must make sure that procs[], numprocs[] and
5662cfcea29SBarry Smith         indices[][] are large enough arrays, either by allocating them dynamically or defining static ones large enough.
5672cfcea29SBarry Smith 
5682cfcea29SBarry Smith 
56907b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
57007b52d57SBarry Smith           ISLocalToGlobalMappingRestoreInfo()
57189d82c54SBarry Smith @*/
5727087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
57389d82c54SBarry Smith {
5746849ba73SBarry Smith   PetscErrorCode ierr;
57597f1f81fSBarry Smith   PetscMPIInt    size,rank,tag1,tag2,tag3,*len,*source,imdex;
57632dcc486SBarry Smith   PetscInt       i,n = mapping->n,Ng,ng,max = 0,*lindices = mapping->indices;
57732dcc486SBarry Smith   PetscInt       *nprocs,*owner,nsends,*sends,j,*starts,nmax,nrecvs,*recvs,proc;
57897f1f81fSBarry Smith   PetscInt       cnt,scale,*ownedsenders,*nownedsenders,rstart,nowned;
57932dcc486SBarry Smith   PetscInt       node,nownedm,nt,*sends2,nsends2,*starts2,*lens2,*dest,nrecvs2,*starts3,*recvs2,k,*bprocs,*tmp;
58032dcc486SBarry Smith   PetscInt       first_procs,first_numprocs,*first_indices;
58189d82c54SBarry Smith   MPI_Request    *recv_waits,*send_waits;
58230dcb7c9SBarry Smith   MPI_Status     recv_status,*send_status,*recv_statuses;
5837adad957SLisandro Dalcin   MPI_Comm       comm  = ((PetscObject)mapping)->comm;
584ace3abfcSBarry Smith   PetscBool      debug = PETSC_FALSE;
58589d82c54SBarry Smith 
58689d82c54SBarry Smith   PetscFunctionBegin;
5870700a824SBarry Smith   PetscValidHeaderSpecific(mapping,IS_LTOGM_CLASSID,1);
58824cf384cSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
58924cf384cSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
59024cf384cSBarry Smith   if (size == 1) {
59124cf384cSBarry Smith     *nproc         = 0;
59224cf384cSBarry Smith     *procs         = PETSC_NULL;
59332dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt),numprocs);CHKERRQ(ierr);
5941e2105dcSBarry Smith     (*numprocs)[0] = 0;
59532dcc486SBarry Smith     ierr           = PetscMalloc(sizeof(PetscInt*),indices);CHKERRQ(ierr);
5961e2105dcSBarry Smith     (*indices)[0]  = PETSC_NULL;
59724cf384cSBarry Smith     PetscFunctionReturn(0);
59824cf384cSBarry Smith   }
59924cf384cSBarry Smith 
600acfcf0e5SJed Brown   ierr = PetscOptionsGetBool(PETSC_NULL,"-islocaltoglobalmappinggetinfo_debug",&debug,PETSC_NULL);CHKERRQ(ierr);
60107b52d57SBarry Smith 
6023677ff5aSBarry Smith   /*
6033677ff5aSBarry Smith     Notes on ISLocalToGlobalMappingGetInfo
6043677ff5aSBarry Smith 
6053677ff5aSBarry Smith     globally owned node - the nodes that have been assigned to this processor in global
6063677ff5aSBarry Smith            numbering, just for this routine.
6073677ff5aSBarry Smith 
6083677ff5aSBarry Smith     nontrivial globally owned node - node assigned to this processor that is on a subdomain
6093677ff5aSBarry Smith            boundary (i.e. is has more than one local owner)
6103677ff5aSBarry Smith 
6113677ff5aSBarry Smith     locally owned node - node that exists on this processors subdomain
6123677ff5aSBarry Smith 
6133677ff5aSBarry Smith     nontrivial locally owned node - node that is not in the interior (i.e. has more than one
6143677ff5aSBarry Smith            local subdomain
6153677ff5aSBarry Smith   */
61624cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag1);CHKERRQ(ierr);
61724cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag2);CHKERRQ(ierr);
61824cf384cSBarry Smith   ierr = PetscObjectGetNewTag((PetscObject)mapping,&tag3);CHKERRQ(ierr);
61989d82c54SBarry Smith 
62089d82c54SBarry Smith   for (i=0; i<n; i++) {
62189d82c54SBarry Smith     if (lindices[i] > max) max = lindices[i];
62289d82c54SBarry Smith   }
62332dcc486SBarry Smith   ierr   = MPI_Allreduce(&max,&Ng,1,MPIU_INT,MPI_MAX,comm);CHKERRQ(ierr);
62478058e43SBarry Smith   Ng++;
62589d82c54SBarry Smith   ierr   = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
62689d82c54SBarry Smith   ierr   = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
627bc8ff85bSBarry Smith   scale  = Ng/size + 1;
628a2e34c3dSBarry Smith   ng     = scale; if (rank == size-1) ng = Ng - scale*(size-1); ng = PetscMax(1,ng);
629caba0dd0SBarry Smith   rstart = scale*rank;
63089d82c54SBarry Smith 
63189d82c54SBarry Smith   /* determine ownership ranges of global indices */
6327c334f02SBarry Smith   ierr = PetscMalloc(2*size*sizeof(PetscInt),&nprocs);CHKERRQ(ierr);
63332dcc486SBarry Smith   ierr = PetscMemzero(nprocs,2*size*sizeof(PetscInt));CHKERRQ(ierr);
63489d82c54SBarry Smith 
63589d82c54SBarry Smith   /* determine owners of each local node  */
6367c334f02SBarry Smith   ierr = PetscMalloc(n*sizeof(PetscInt),&owner);CHKERRQ(ierr);
63789d82c54SBarry Smith   for (i=0; i<n; i++) {
6383677ff5aSBarry Smith     proc             = lindices[i]/scale; /* processor that globally owns this index */
63927c402fcSBarry Smith     nprocs[2*proc+1] = 1;                 /* processor globally owns at least one of ours */
6403677ff5aSBarry Smith     owner[i]         = proc;
64127c402fcSBarry Smith     nprocs[2*proc]++;                     /* count of how many that processor globally owns of ours */
64289d82c54SBarry Smith   }
64327c402fcSBarry Smith   nsends = 0; for (i=0; i<size; i++) nsends += nprocs[2*i+1];
6441e2582c4SBarry Smith   ierr = PetscInfo1(mapping,"Number of global owners for my local data %d\n",nsends);CHKERRQ(ierr);
64589d82c54SBarry Smith 
64689d82c54SBarry Smith   /* inform other processors of number of messages and max length*/
64727c402fcSBarry Smith   ierr = PetscMaxSum(comm,nprocs,&nmax,&nrecvs);CHKERRQ(ierr);
6481e2582c4SBarry Smith   ierr = PetscInfo1(mapping,"Number of local owners for my global data %d\n",nrecvs);CHKERRQ(ierr);
64989d82c54SBarry Smith 
65089d82c54SBarry Smith   /* post receives for owned rows */
65132dcc486SBarry Smith   ierr = PetscMalloc((2*nrecvs+1)*(nmax+1)*sizeof(PetscInt),&recvs);CHKERRQ(ierr);
652b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
65389d82c54SBarry Smith   for (i=0; i<nrecvs; i++) {
65432dcc486SBarry Smith     ierr = MPI_Irecv(recvs+2*nmax*i,2*nmax,MPIU_INT,MPI_ANY_SOURCE,tag1,comm,recv_waits+i);CHKERRQ(ierr);
65589d82c54SBarry Smith   }
65689d82c54SBarry Smith 
65789d82c54SBarry Smith   /* pack messages containing lists of local nodes to owners */
65832dcc486SBarry Smith   ierr      = PetscMalloc((2*n+1)*sizeof(PetscInt),&sends);CHKERRQ(ierr);
65932dcc486SBarry Smith   ierr      = PetscMalloc((size+1)*sizeof(PetscInt),&starts);CHKERRQ(ierr);
66089d82c54SBarry Smith   starts[0] = 0;
661*f6e5521dSKarl Rupp   for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2];
66289d82c54SBarry Smith   for (i=0; i<n; i++) {
66389d82c54SBarry Smith     sends[starts[owner[i]]++] = lindices[i];
66430dcb7c9SBarry Smith     sends[starts[owner[i]]++] = i;
66589d82c54SBarry Smith   }
66689d82c54SBarry Smith   ierr = PetscFree(owner);CHKERRQ(ierr);
66789d82c54SBarry Smith   starts[0] = 0;
668*f6e5521dSKarl Rupp   for (i=1; i<size; i++) starts[i] = starts[i-1] + 2*nprocs[2*i-2];
66989d82c54SBarry Smith 
67089d82c54SBarry Smith   /* send the messages */
671b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
67232dcc486SBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(PetscInt),&dest);CHKERRQ(ierr);
67389d82c54SBarry Smith   cnt = 0;
67489d82c54SBarry Smith   for (i=0; i<size; i++) {
67527c402fcSBarry Smith     if (nprocs[2*i]) {
67632dcc486SBarry Smith       ierr      = MPI_Isend(sends+starts[i],2*nprocs[2*i],MPIU_INT,i,tag1,comm,send_waits+cnt);CHKERRQ(ierr);
67730dcb7c9SBarry Smith       dest[cnt] = i;
67889d82c54SBarry Smith       cnt++;
67989d82c54SBarry Smith     }
68089d82c54SBarry Smith   }
68189d82c54SBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
68289d82c54SBarry Smith 
68389d82c54SBarry Smith   /* wait on receives */
68497f1f81fSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(PetscMPIInt),&source);CHKERRQ(ierr);
68597f1f81fSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(PetscMPIInt),&len);CHKERRQ(ierr);
68689d82c54SBarry Smith   cnt  = nrecvs;
68732dcc486SBarry Smith   ierr = PetscMalloc((ng+1)*sizeof(PetscInt),&nownedsenders);CHKERRQ(ierr);
68832dcc486SBarry Smith   ierr = PetscMemzero(nownedsenders,ng*sizeof(PetscInt));CHKERRQ(ierr);
68989d82c54SBarry Smith   while (cnt) {
69089d82c54SBarry Smith     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
69189d82c54SBarry Smith     /* unpack receives into our local space */
69232dcc486SBarry Smith     ierr          = MPI_Get_count(&recv_status,MPIU_INT,&len[imdex]);CHKERRQ(ierr);
69389d82c54SBarry Smith     source[imdex] = recv_status.MPI_SOURCE;
69430dcb7c9SBarry Smith     len[imdex]    = len[imdex]/2;
695caba0dd0SBarry Smith     /* count how many local owners for each of my global owned indices */
69630dcb7c9SBarry Smith     for (i=0; i<len[imdex]; i++) nownedsenders[recvs[2*imdex*nmax+2*i]-rstart]++;
69789d82c54SBarry Smith     cnt--;
69889d82c54SBarry Smith   }
69989d82c54SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
70089d82c54SBarry Smith 
70130dcb7c9SBarry Smith   /* count how many globally owned indices are on an edge multiplied by how many processors own them. */
702bc8ff85bSBarry Smith   nowned  = 0;
703bc8ff85bSBarry Smith   nownedm = 0;
704bc8ff85bSBarry Smith   for (i=0; i<ng; i++) {
705bc8ff85bSBarry Smith     if (nownedsenders[i] > 1) {nownedm += nownedsenders[i]; nowned++;}
706bc8ff85bSBarry Smith   }
707bc8ff85bSBarry Smith 
708bc8ff85bSBarry Smith   /* create single array to contain rank of all local owners of each globally owned index */
70932dcc486SBarry Smith   ierr      = PetscMalloc((nownedm+1)*sizeof(PetscInt),&ownedsenders);CHKERRQ(ierr);
71032dcc486SBarry Smith   ierr      = PetscMalloc((ng+1)*sizeof(PetscInt),&starts);CHKERRQ(ierr);
711bc8ff85bSBarry Smith   starts[0] = 0;
712bc8ff85bSBarry Smith   for (i=1; i<ng; i++) {
713bc8ff85bSBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
714bc8ff85bSBarry Smith     else starts[i] = starts[i-1];
715bc8ff85bSBarry Smith   }
716bc8ff85bSBarry Smith 
71730dcb7c9SBarry Smith   /* for each nontrival globally owned node list all arriving processors */
718bc8ff85bSBarry Smith   for (i=0; i<nrecvs; i++) {
719bc8ff85bSBarry Smith     for (j=0; j<len[i]; j++) {
72030dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
721*f6e5521dSKarl Rupp       if (nownedsenders[node] > 1) ownedsenders[starts[node]++] = source[i];
722bc8ff85bSBarry Smith     }
723bc8ff85bSBarry Smith   }
724bc8ff85bSBarry Smith 
72507b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
72630dcb7c9SBarry Smith     starts[0] = 0;
72730dcb7c9SBarry Smith     for (i=1; i<ng; i++) {
72830dcb7c9SBarry Smith       if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
72930dcb7c9SBarry Smith       else starts[i] = starts[i-1];
73030dcb7c9SBarry Smith     }
73130dcb7c9SBarry Smith     for (i=0; i<ng; i++) {
73230dcb7c9SBarry Smith       if (nownedsenders[i] > 1) {
73330dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] global node %d local owner processors: ",rank,i+rstart);CHKERRQ(ierr);
73430dcb7c9SBarry Smith         for (j=0; j<nownedsenders[i]; j++) {
73530dcb7c9SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%d ",ownedsenders[starts[i]+j]);CHKERRQ(ierr);
73630dcb7c9SBarry Smith         }
73730dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
73830dcb7c9SBarry Smith       }
73930dcb7c9SBarry Smith     }
74030dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
74107b52d57SBarry Smith   } /* -----------------------------------  */
74230dcb7c9SBarry Smith 
7433677ff5aSBarry Smith   /* wait on original sends */
7443a96401aSBarry Smith   if (nsends) {
745b0a32e0cSBarry Smith     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
7463a96401aSBarry Smith     ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
7473a96401aSBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
7483a96401aSBarry Smith   }
74989d82c54SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
7503a96401aSBarry Smith   ierr = PetscFree(sends);CHKERRQ(ierr);
7513677ff5aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
7523677ff5aSBarry Smith 
7533677ff5aSBarry Smith   /* pack messages to send back to local owners */
75430dcb7c9SBarry Smith   starts[0] = 0;
75530dcb7c9SBarry Smith   for (i=1; i<ng; i++) {
75630dcb7c9SBarry Smith     if (nownedsenders[i-1] > 1) starts[i] = starts[i-1] + nownedsenders[i-1];
75730dcb7c9SBarry Smith     else starts[i] = starts[i-1];
75830dcb7c9SBarry Smith   }
75930dcb7c9SBarry Smith   nsends2 = nrecvs;
76032dcc486SBarry Smith   ierr    = PetscMalloc((nsends2+1)*sizeof(PetscInt),&nprocs);CHKERRQ(ierr); /* length of each message */
76130dcb7c9SBarry Smith   for (i=0; i<nrecvs; i++) {
76230dcb7c9SBarry Smith     nprocs[i] = 1;
76330dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
76430dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
765*f6e5521dSKarl Rupp       if (nownedsenders[node] > 1) nprocs[i] += 2 + nownedsenders[node];
76630dcb7c9SBarry Smith     }
76730dcb7c9SBarry Smith   }
768*f6e5521dSKarl Rupp   nt = 0;
769*f6e5521dSKarl Rupp   for (i=0; i<nsends2; i++) nt += nprocs[i];
770*f6e5521dSKarl Rupp 
77132dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),&sends2);CHKERRQ(ierr);
77232dcc486SBarry Smith   ierr = PetscMalloc((nsends2+1)*sizeof(PetscInt),&starts2);CHKERRQ(ierr);
773*f6e5521dSKarl Rupp 
774*f6e5521dSKarl Rupp   starts2[0] = 0;
775*f6e5521dSKarl Rupp   for (i=1; i<nsends2; i++) starts2[i] = starts2[i-1] + nprocs[i-1];
77630dcb7c9SBarry Smith   /*
77730dcb7c9SBarry Smith      Each message is 1 + nprocs[i] long, and consists of
77830dcb7c9SBarry Smith        (0) the number of nodes being sent back
77930dcb7c9SBarry Smith        (1) the local node number,
78030dcb7c9SBarry Smith        (2) the number of processors sharing it,
78130dcb7c9SBarry Smith        (3) the processors sharing it
78230dcb7c9SBarry Smith   */
78330dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
78430dcb7c9SBarry Smith     cnt = 1;
78530dcb7c9SBarry Smith     sends2[starts2[i]] = 0;
78630dcb7c9SBarry Smith     for (j=0; j<len[i]; j++) {
78730dcb7c9SBarry Smith       node = recvs[2*i*nmax+2*j]-rstart;
78830dcb7c9SBarry Smith       if (nownedsenders[node] > 1) {
78930dcb7c9SBarry Smith         sends2[starts2[i]]++;
79030dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = recvs[2*i*nmax+2*j+1];
79130dcb7c9SBarry Smith         sends2[starts2[i]+cnt++] = nownedsenders[node];
79232dcc486SBarry Smith         ierr = PetscMemcpy(&sends2[starts2[i]+cnt],&ownedsenders[starts[node]],nownedsenders[node]*sizeof(PetscInt));CHKERRQ(ierr);
79330dcb7c9SBarry Smith         cnt += nownedsenders[node];
79430dcb7c9SBarry Smith       }
79530dcb7c9SBarry Smith     }
79630dcb7c9SBarry Smith   }
79730dcb7c9SBarry Smith 
79830dcb7c9SBarry Smith   /* receive the message lengths */
79930dcb7c9SBarry Smith   nrecvs2 = nsends;
80032dcc486SBarry Smith   ierr    = PetscMalloc((nrecvs2+1)*sizeof(PetscInt),&lens2);CHKERRQ(ierr);
80132dcc486SBarry Smith   ierr    = PetscMalloc((nrecvs2+1)*sizeof(PetscInt),&starts3);CHKERRQ(ierr);
802d44834fbSBarry Smith   ierr    = PetscMalloc((nrecvs2+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
80330dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
804d44834fbSBarry Smith     ierr = MPI_Irecv(&lens2[i],1,MPIU_INT,dest[i],tag2,comm,recv_waits+i);CHKERRQ(ierr);
80530dcb7c9SBarry Smith   }
806d44834fbSBarry Smith 
8078a8e0b3aSBarry Smith   /* send the message lengths */
8088a8e0b3aSBarry Smith   for (i=0; i<nsends2; i++) {
8098a8e0b3aSBarry Smith     ierr = MPI_Send(&nprocs[i],1,MPIU_INT,source[i],tag2,comm);CHKERRQ(ierr);
8108a8e0b3aSBarry Smith   }
8118a8e0b3aSBarry Smith 
812d44834fbSBarry Smith   /* wait on receives of lens */
8130c468ba9SBarry Smith   if (nrecvs2) {
8140c468ba9SBarry Smith     ierr = PetscMalloc(nrecvs2*sizeof(MPI_Status),&recv_statuses);CHKERRQ(ierr);
815d44834fbSBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
816d44834fbSBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8170c468ba9SBarry Smith   }
818a2ea699eSBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
819d44834fbSBarry Smith 
82030dcb7c9SBarry Smith   starts3[0] = 0;
821d44834fbSBarry Smith   nt         = 0;
82230dcb7c9SBarry Smith   for (i=0; i<nrecvs2-1; i++) {
82330dcb7c9SBarry Smith     starts3[i+1] = starts3[i] + lens2[i];
824d44834fbSBarry Smith     nt          += lens2[i];
82530dcb7c9SBarry Smith   }
82676466f69SStefano Zampini   if (nrecvs2) nt += lens2[nrecvs2-1];
827d44834fbSBarry Smith 
82832dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),&recvs2);CHKERRQ(ierr);
829b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs2+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
83052b72c4aSBarry Smith   for (i=0; i<nrecvs2; i++) {
83132dcc486SBarry Smith     ierr = MPI_Irecv(recvs2+starts3[i],lens2[i],MPIU_INT,dest[i],tag3,comm,recv_waits+i);CHKERRQ(ierr);
83230dcb7c9SBarry Smith   }
83330dcb7c9SBarry Smith 
83430dcb7c9SBarry Smith   /* send the messages */
835b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends2+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
83630dcb7c9SBarry Smith   for (i=0; i<nsends2; i++) {
83732dcc486SBarry Smith     ierr = MPI_Isend(sends2+starts2[i],nprocs[i],MPIU_INT,source[i],tag3,comm,send_waits+i);CHKERRQ(ierr);
83830dcb7c9SBarry Smith   }
83930dcb7c9SBarry Smith 
84030dcb7c9SBarry Smith   /* wait on receives */
8410c468ba9SBarry Smith   if (nrecvs2) {
8420c468ba9SBarry Smith     ierr = PetscMalloc(nrecvs2*sizeof(MPI_Status),&recv_statuses);CHKERRQ(ierr);
84330dcb7c9SBarry Smith     ierr = MPI_Waitall(nrecvs2,recv_waits,recv_statuses);CHKERRQ(ierr);
84430dcb7c9SBarry Smith     ierr = PetscFree(recv_statuses);CHKERRQ(ierr);
8450c468ba9SBarry Smith   }
84630dcb7c9SBarry Smith   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
84730dcb7c9SBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
84830dcb7c9SBarry Smith 
84907b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
85030dcb7c9SBarry Smith     cnt = 0;
85130dcb7c9SBarry Smith     for (i=0; i<nrecvs2; i++) {
85230dcb7c9SBarry Smith       nt = recvs2[cnt++];
85330dcb7c9SBarry Smith       for (j=0; j<nt; j++) {
85430dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"[%d] local node %d number of subdomains %d: ",rank,recvs2[cnt],recvs2[cnt+1]);CHKERRQ(ierr);
85530dcb7c9SBarry Smith         for (k=0; k<recvs2[cnt+1]; k++) {
85630dcb7c9SBarry Smith           ierr = PetscSynchronizedPrintf(comm,"%d ",recvs2[cnt+2+k]);CHKERRQ(ierr);
85730dcb7c9SBarry Smith         }
85830dcb7c9SBarry Smith         cnt += 2 + recvs2[cnt+1];
85930dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
86030dcb7c9SBarry Smith       }
86130dcb7c9SBarry Smith     }
86230dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
86307b52d57SBarry Smith   } /* -----------------------------------  */
86430dcb7c9SBarry Smith 
86530dcb7c9SBarry Smith   /* count number subdomains for each local node */
86632dcc486SBarry Smith   ierr = PetscMalloc(size*sizeof(PetscInt),&nprocs);CHKERRQ(ierr);
86732dcc486SBarry Smith   ierr = PetscMemzero(nprocs,size*sizeof(PetscInt));CHKERRQ(ierr);
86830dcb7c9SBarry Smith   cnt  = 0;
86930dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
87030dcb7c9SBarry Smith     nt = recvs2[cnt++];
87130dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
872*f6e5521dSKarl Rupp       for (k=0; k<recvs2[cnt+1]; k++) nprocs[recvs2[cnt+2+k]]++;
87330dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
87430dcb7c9SBarry Smith     }
87530dcb7c9SBarry Smith   }
87630dcb7c9SBarry Smith   nt = 0; for (i=0; i<size; i++) nt += (nprocs[i] > 0);
87730dcb7c9SBarry Smith   *nproc    = nt;
87832dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),procs);CHKERRQ(ierr);
87932dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt),numprocs);CHKERRQ(ierr);
88032dcc486SBarry Smith   ierr = PetscMalloc((nt+1)*sizeof(PetscInt*),indices);CHKERRQ(ierr);
881*f6e5521dSKarl Rupp   for (i=0;i<nt+1;i++) (*indices)[i]=PETSC_NULL;
88232dcc486SBarry Smith   ierr = PetscMalloc(size*sizeof(PetscInt),&bprocs);CHKERRQ(ierr);
88330dcb7c9SBarry Smith   cnt       = 0;
88430dcb7c9SBarry Smith   for (i=0; i<size; i++) {
88530dcb7c9SBarry Smith     if (nprocs[i] > 0) {
88630dcb7c9SBarry Smith       bprocs[i]        = cnt;
88730dcb7c9SBarry Smith       (*procs)[cnt]    = i;
88830dcb7c9SBarry Smith       (*numprocs)[cnt] = nprocs[i];
88932dcc486SBarry Smith       ierr             = PetscMalloc(nprocs[i]*sizeof(PetscInt),&(*indices)[cnt]);CHKERRQ(ierr);
89030dcb7c9SBarry Smith       cnt++;
89130dcb7c9SBarry Smith     }
89230dcb7c9SBarry Smith   }
89330dcb7c9SBarry Smith 
89430dcb7c9SBarry Smith   /* make the list of subdomains for each nontrivial local node */
89532dcc486SBarry Smith   ierr = PetscMemzero(*numprocs,nt*sizeof(PetscInt));CHKERRQ(ierr);
89630dcb7c9SBarry Smith   cnt  = 0;
89730dcb7c9SBarry Smith   for (i=0; i<nrecvs2; i++) {
89830dcb7c9SBarry Smith     nt = recvs2[cnt++];
89930dcb7c9SBarry Smith     for (j=0; j<nt; j++) {
900*f6e5521dSKarl Rupp       for (k=0; k<recvs2[cnt+1]; k++) (*indices)[bprocs[recvs2[cnt+2+k]]][(*numprocs)[bprocs[recvs2[cnt+2+k]]]++] = recvs2[cnt];
90130dcb7c9SBarry Smith       cnt += 2 + recvs2[cnt+1];
90230dcb7c9SBarry Smith     }
90330dcb7c9SBarry Smith   }
90430dcb7c9SBarry Smith   ierr = PetscFree(bprocs);CHKERRQ(ierr);
90507b52d57SBarry Smith   ierr = PetscFree(recvs2);CHKERRQ(ierr);
90630dcb7c9SBarry Smith 
90707b52d57SBarry Smith   /* sort the node indexing by their global numbers */
90807b52d57SBarry Smith   nt = *nproc;
90907b52d57SBarry Smith   for (i=0; i<nt; i++) {
91032dcc486SBarry Smith     ierr = PetscMalloc(((*numprocs)[i])*sizeof(PetscInt),&tmp);CHKERRQ(ierr);
911*f6e5521dSKarl Rupp     for (j=0; j<(*numprocs)[i]; j++) tmp[j] = lindices[(*indices)[i][j]];
91207b52d57SBarry Smith     ierr = PetscSortIntWithArray((*numprocs)[i],tmp,(*indices)[i]);CHKERRQ(ierr);
91307b52d57SBarry Smith     ierr = PetscFree(tmp);CHKERRQ(ierr);
91407b52d57SBarry Smith   }
91507b52d57SBarry Smith 
91607b52d57SBarry Smith   if (debug) { /* -----------------------------------  */
91730dcb7c9SBarry Smith     nt = *nproc;
91830dcb7c9SBarry Smith     for (i=0; i<nt; i++) {
91930dcb7c9SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"[%d] subdomain %d number of indices %d: ",rank,(*procs)[i],(*numprocs)[i]);CHKERRQ(ierr);
92030dcb7c9SBarry Smith       for (j=0; j<(*numprocs)[i]; j++) {
92130dcb7c9SBarry Smith         ierr = PetscSynchronizedPrintf(comm,"%d ",(*indices)[i][j]);CHKERRQ(ierr);
92230dcb7c9SBarry Smith       }
92330dcb7c9SBarry Smith       ierr = PetscSynchronizedPrintf(comm,"\n");CHKERRQ(ierr);
92430dcb7c9SBarry Smith     }
92530dcb7c9SBarry Smith     ierr = PetscSynchronizedFlush(comm);CHKERRQ(ierr);
92607b52d57SBarry Smith   } /* -----------------------------------  */
92730dcb7c9SBarry Smith 
92830dcb7c9SBarry Smith   /* wait on sends */
92930dcb7c9SBarry Smith   if (nsends2) {
930b0a32e0cSBarry Smith     ierr = PetscMalloc(nsends2*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
93130dcb7c9SBarry Smith     ierr = MPI_Waitall(nsends2,send_waits,send_status);CHKERRQ(ierr);
93230dcb7c9SBarry Smith     ierr = PetscFree(send_status);CHKERRQ(ierr);
93330dcb7c9SBarry Smith   }
93430dcb7c9SBarry Smith 
93530dcb7c9SBarry Smith   ierr = PetscFree(starts3);CHKERRQ(ierr);
93630dcb7c9SBarry Smith   ierr = PetscFree(dest);CHKERRQ(ierr);
93730dcb7c9SBarry Smith   ierr = PetscFree(send_waits);CHKERRQ(ierr);
9383677ff5aSBarry Smith 
939bc8ff85bSBarry Smith   ierr = PetscFree(nownedsenders);CHKERRQ(ierr);
940bc8ff85bSBarry Smith   ierr = PetscFree(ownedsenders);CHKERRQ(ierr);
941bc8ff85bSBarry Smith   ierr = PetscFree(starts);CHKERRQ(ierr);
94230dcb7c9SBarry Smith   ierr = PetscFree(starts2);CHKERRQ(ierr);
94330dcb7c9SBarry Smith   ierr = PetscFree(lens2);CHKERRQ(ierr);
94489d82c54SBarry Smith 
94589d82c54SBarry Smith   ierr = PetscFree(source);CHKERRQ(ierr);
94697f1f81fSBarry Smith   ierr = PetscFree(len);CHKERRQ(ierr);
94789d82c54SBarry Smith   ierr = PetscFree(recvs);CHKERRQ(ierr);
9483a96401aSBarry Smith   ierr = PetscFree(nprocs);CHKERRQ(ierr);
94930dcb7c9SBarry Smith   ierr = PetscFree(sends2);CHKERRQ(ierr);
95024cf384cSBarry Smith 
95124cf384cSBarry Smith   /* put the information about myself as the first entry in the list */
95224cf384cSBarry Smith   first_procs    = (*procs)[0];
95324cf384cSBarry Smith   first_numprocs = (*numprocs)[0];
95424cf384cSBarry Smith   first_indices  = (*indices)[0];
95524cf384cSBarry Smith   for (i=0; i<*nproc; i++) {
95624cf384cSBarry Smith     if ((*procs)[i] == rank) {
95724cf384cSBarry Smith       (*procs)[0]    = (*procs)[i];
95824cf384cSBarry Smith       (*numprocs)[0] = (*numprocs)[i];
95924cf384cSBarry Smith       (*indices)[0]  = (*indices)[i];
96024cf384cSBarry Smith       (*procs)[i]    = first_procs;
96124cf384cSBarry Smith       (*numprocs)[i] = first_numprocs;
96224cf384cSBarry Smith       (*indices)[i]  = first_indices;
96324cf384cSBarry Smith       break;
96424cf384cSBarry Smith     }
96524cf384cSBarry Smith   }
96689d82c54SBarry Smith   PetscFunctionReturn(0);
96789d82c54SBarry Smith }
96889d82c54SBarry Smith 
9694a2ae208SSatish Balay #undef __FUNCT__
9704a2ae208SSatish Balay #define __FUNCT__ "ISLocalToGlobalMappingRestoreInfo"
97107b52d57SBarry Smith /*@C
97207b52d57SBarry Smith     ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by ISLocalToGlobalMappingGetInfo()
97389d82c54SBarry Smith 
97407b52d57SBarry Smith     Collective on ISLocalToGlobalMapping
97507b52d57SBarry Smith 
97607b52d57SBarry Smith     Input Parameters:
97707b52d57SBarry Smith .   mapping - the mapping from local to global indexing
97807b52d57SBarry Smith 
97907b52d57SBarry Smith     Output Parameter:
98007b52d57SBarry Smith +   nproc - number of processors that are connected to this one
98107b52d57SBarry Smith .   proc - neighboring processors
98207b52d57SBarry Smith .   numproc - number of indices for each processor
98307b52d57SBarry Smith -   indices - indices of local nodes shared with neighbor (sorted by global numbering)
98407b52d57SBarry Smith 
98507b52d57SBarry Smith     Level: advanced
98607b52d57SBarry Smith 
98707b52d57SBarry Smith .seealso: ISLocalToGlobalMappingDestroy(), ISLocalToGlobalMappingCreateIS(), ISLocalToGlobalMappingCreate(),
98807b52d57SBarry Smith           ISLocalToGlobalMappingGetInfo()
98907b52d57SBarry Smith @*/
9907087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping,PetscInt *nproc,PetscInt *procs[],PetscInt *numprocs[],PetscInt **indices[])
99107b52d57SBarry Smith {
9926849ba73SBarry Smith   PetscErrorCode ierr;
99332dcc486SBarry Smith   PetscInt       i;
99407b52d57SBarry Smith 
99507b52d57SBarry Smith   PetscFunctionBegin;
99605b42c5fSBarry Smith   ierr = PetscFree(*procs);CHKERRQ(ierr);
99705b42c5fSBarry Smith   ierr = PetscFree(*numprocs);CHKERRQ(ierr);
99800ff320aSBarry Smith   if (*indices) {
99905b42c5fSBarry Smith     ierr = PetscFree((*indices)[0]);CHKERRQ(ierr);
100000ff320aSBarry Smith     for (i=1; i<*nproc; i++) {
100105b42c5fSBarry Smith       ierr = PetscFree((*indices)[i]);CHKERRQ(ierr);
100207b52d57SBarry Smith     }
100307b52d57SBarry Smith     ierr = PetscFree(*indices);CHKERRQ(ierr);
100424cf384cSBarry Smith   }
100507b52d57SBarry Smith   PetscFunctionReturn(0);
100607b52d57SBarry Smith }
100786994e45SJed Brown 
100886994e45SJed Brown #undef __FUNCT__
100986994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingGetIndices"
101086994e45SJed Brown /*@C
101186994e45SJed Brown    ISLocalToGlobalMappingGetIndices - Get global indices for every local point
101286994e45SJed Brown 
101386994e45SJed Brown    Not Collective
101486994e45SJed Brown 
101586994e45SJed Brown    Input Arguments:
101686994e45SJed Brown . ltog - local to global mapping
101786994e45SJed Brown 
101886994e45SJed Brown    Output Arguments:
101986994e45SJed Brown . array - array of indices
102086994e45SJed Brown 
102186994e45SJed Brown    Level: advanced
102286994e45SJed Brown 
102386994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingRestoreIndices()
102486994e45SJed Brown @*/
10257087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
102686994e45SJed Brown {
102786994e45SJed Brown   PetscFunctionBegin;
102886994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
102986994e45SJed Brown   PetscValidPointer(array,2);
103086994e45SJed Brown   *array = ltog->indices;
103186994e45SJed Brown   PetscFunctionReturn(0);
103286994e45SJed Brown }
103386994e45SJed Brown 
103486994e45SJed Brown #undef __FUNCT__
103586994e45SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingRestoreIndices"
103686994e45SJed Brown /*@C
103786994e45SJed Brown    ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with ISLocalToGlobalMappingRestoreIndices()
103886994e45SJed Brown 
103986994e45SJed Brown    Not Collective
104086994e45SJed Brown 
104186994e45SJed Brown    Input Arguments:
104286994e45SJed Brown + ltog - local to global mapping
104386994e45SJed Brown - array - array of indices
104486994e45SJed Brown 
104586994e45SJed Brown    Level: advanced
104686994e45SJed Brown 
104786994e45SJed Brown .seealso: ISLocalToGlobalMappingCreate(), ISLocalToGlobalMappingApply(), ISLocalToGlobalMappingGetIndices()
104886994e45SJed Brown @*/
10497087cfbeSBarry Smith PetscErrorCode  ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog,const PetscInt **array)
105086994e45SJed Brown {
105186994e45SJed Brown   PetscFunctionBegin;
105286994e45SJed Brown   PetscValidHeaderSpecific(ltog,IS_LTOGM_CLASSID,1);
105386994e45SJed Brown   PetscValidPointer(array,2);
105486994e45SJed Brown   if (*array != ltog->indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_BADPTR,"Trying to return mismatched pointer");
105586994e45SJed Brown   *array = PETSC_NULL;
105686994e45SJed Brown   PetscFunctionReturn(0);
105786994e45SJed Brown }
1058f7efa3c7SJed Brown 
1059f7efa3c7SJed Brown #undef __FUNCT__
1060f7efa3c7SJed Brown #define __FUNCT__ "ISLocalToGlobalMappingConcatenate"
1061f7efa3c7SJed Brown /*@C
1062f7efa3c7SJed Brown    ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings
1063f7efa3c7SJed Brown 
1064f7efa3c7SJed Brown    Not Collective
1065f7efa3c7SJed Brown 
1066f7efa3c7SJed Brown    Input Arguments:
1067f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate
1068f7efa3c7SJed Brown . n - number of mappings to concatenate
1069f7efa3c7SJed Brown - ltogs - local to global mappings
1070f7efa3c7SJed Brown 
1071f7efa3c7SJed Brown    Output Arguments:
1072f7efa3c7SJed Brown . ltogcat - new mapping
1073f7efa3c7SJed Brown 
1074f7efa3c7SJed Brown    Level: advanced
1075f7efa3c7SJed Brown 
1076f7efa3c7SJed Brown .seealso: ISLocalToGlobalMappingCreate()
1077f7efa3c7SJed Brown @*/
1078f7efa3c7SJed Brown PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm,PetscInt n,const ISLocalToGlobalMapping ltogs[],ISLocalToGlobalMapping *ltogcat)
1079f7efa3c7SJed Brown {
1080f7efa3c7SJed Brown   PetscInt       i,cnt,m,*idx;
1081f7efa3c7SJed Brown   PetscErrorCode ierr;
1082f7efa3c7SJed Brown 
1083f7efa3c7SJed Brown   PetscFunctionBegin;
1084f7efa3c7SJed Brown   if (n < 0) SETERRQ1(comm,PETSC_ERR_ARG_OUTOFRANGE,"Must have a non-negative number of mappings, given %D",n);
1085f7efa3c7SJed Brown   if (n > 0) PetscValidPointer(ltogs,3);
1086f7efa3c7SJed Brown   for (i=0; i<n; i++) PetscValidHeaderSpecific(ltogs[i],IS_LTOGM_CLASSID,3);
1087f7efa3c7SJed Brown   PetscValidPointer(ltogcat,4);
1088f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1089f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1090f7efa3c7SJed Brown     cnt += m;
1091f7efa3c7SJed Brown   }
1092f7efa3c7SJed Brown   ierr = PetscMalloc(cnt*sizeof(PetscInt),&idx);CHKERRQ(ierr);
1093f7efa3c7SJed Brown   for (cnt=0,i=0; i<n; i++) {
1094f7efa3c7SJed Brown     const PetscInt *subidx;
1095f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetSize(ltogs[i],&m);CHKERRQ(ierr);
1096f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingGetIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1097f7efa3c7SJed Brown     ierr = PetscMemcpy(&idx[cnt],subidx,m*sizeof(PetscInt));CHKERRQ(ierr);
1098f7efa3c7SJed Brown     ierr = ISLocalToGlobalMappingRestoreIndices(ltogs[i],&subidx);CHKERRQ(ierr);
1099f7efa3c7SJed Brown     cnt += m;
1100f7efa3c7SJed Brown   }
1101f7efa3c7SJed Brown   ierr = ISLocalToGlobalMappingCreate(comm,cnt,idx,PETSC_OWN_POINTER,ltogcat);CHKERRQ(ierr);
1102f7efa3c7SJed Brown   PetscFunctionReturn(0);
1103f7efa3c7SJed Brown }
1104