1af0996ceSBarry Smith #include <petsc/private/isimpl.h> /*I "petscis.h" I*/ 2e8f14785SLisandro Dalcin #include <petsc/private/hashmapi.h> 30c312b8eSJed Brown #include <petscsf.h> 4665c2dedSJed Brown #include <petscviewer.h> 5633354d9SStefano Zampini #include <petscbt.h> 62362add9SBarry Smith 77087cfbeSBarry Smith PetscClassId IS_LTOGM_CLASSID; 8633354d9SStefano Zampini static PetscErrorCode ISLocalToGlobalMappingSetUpBlockInfo_Private(ISLocalToGlobalMapping); 98e58c17dSMatthew Knepley 10413f72f0SBarry Smith typedef struct { 11413f72f0SBarry Smith PetscInt *globals; 12413f72f0SBarry Smith } ISLocalToGlobalMapping_Basic; 13413f72f0SBarry Smith 14413f72f0SBarry Smith typedef struct { 15e8f14785SLisandro Dalcin PetscHMapI globalht; 16413f72f0SBarry Smith } ISLocalToGlobalMapping_Hash; 17413f72f0SBarry Smith 186528b96dSMatthew G. Knepley /*@C 19cab54364SBarry Smith ISGetPointRange - Returns a description of the points in an `IS` suitable for traversal 20413f72f0SBarry Smith 2120662ed9SBarry Smith Not Collective 226528b96dSMatthew G. Knepley 236528b96dSMatthew G. Knepley Input Parameter: 24cab54364SBarry Smith . pointIS - The `IS` object 256528b96dSMatthew G. Knepley 266528b96dSMatthew G. Knepley Output Parameters: 276528b96dSMatthew G. Knepley + pStart - The first index, see notes 286528b96dSMatthew G. Knepley . pEnd - One past the last index, see notes 296528b96dSMatthew G. Knepley - points - The indices, see notes 306528b96dSMatthew G. Knepley 316528b96dSMatthew G. Knepley Level: intermediate 326528b96dSMatthew G. Knepley 33cab54364SBarry Smith Notes: 3420662ed9SBarry Smith If the `IS` contains contiguous indices in an `ISSTRIDE`, then the indices are contained in [pStart, pEnd) and points = `NULL`. 3520662ed9SBarry Smith Otherwise, `pStart = 0`, `pEnd = numIndices`, and points is an array of the indices. This supports the following pattern 36cab54364SBarry Smith .vb 37cab54364SBarry Smith ISGetPointRange(is, &pStart, &pEnd, &points); 38cab54364SBarry Smith for (p = pStart; p < pEnd; ++p) { 39cab54364SBarry Smith const PetscInt point = points ? points[p] : p; 4020662ed9SBarry Smith // use point 41cab54364SBarry Smith } 42cab54364SBarry Smith ISRestorePointRange(is, &pstart, &pEnd, &points); 43cab54364SBarry Smith .ve 4420662ed9SBarry Smith Hence the same code can be written for `pointIS` being a `ISSTRIDE` or `ISGENERAL` 45cab54364SBarry Smith 46cab54364SBarry Smith .seealso: [](sec_scatter), `IS`, `ISRestorePointRange()`, `ISGetPointSubrange()`, `ISGetIndices()`, `ISCreateStride()` 476528b96dSMatthew G. Knepley @*/ 48cc4c1da9SBarry Smith PetscErrorCode ISGetPointRange(IS pointIS, PetscInt *pStart, PetscInt *pEnd, const PetscInt *points[]) 49d71ae5a4SJacob Faibussowitsch { 509305a4c7SMatthew G. Knepley PetscInt numCells, step = 1; 519305a4c7SMatthew G. Knepley PetscBool isStride; 529305a4c7SMatthew G. Knepley 539305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 549305a4c7SMatthew G. Knepley *pStart = 0; 559305a4c7SMatthew G. Knepley *points = NULL; 569566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(pointIS, &numCells)); 579566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)pointIS, ISSTRIDE, &isStride)); 589566063dSJacob Faibussowitsch if (isStride) PetscCall(ISStrideGetInfo(pointIS, pStart, &step)); 599305a4c7SMatthew G. Knepley *pEnd = *pStart + numCells; 609566063dSJacob Faibussowitsch if (!isStride || step != 1) PetscCall(ISGetIndices(pointIS, points)); 613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 629305a4c7SMatthew G. Knepley } 639305a4c7SMatthew G. Knepley 646528b96dSMatthew G. Knepley /*@C 65cab54364SBarry Smith ISRestorePointRange - Destroys the traversal description created with `ISGetPointRange()` 666528b96dSMatthew G. Knepley 6720662ed9SBarry Smith Not Collective 686528b96dSMatthew G. Knepley 696528b96dSMatthew G. Knepley Input Parameters: 70cab54364SBarry Smith + pointIS - The `IS` object 71cab54364SBarry Smith . pStart - The first index, from `ISGetPointRange()` 72cab54364SBarry Smith . pEnd - One past the last index, from `ISGetPointRange()` 73cab54364SBarry Smith - points - The indices, from `ISGetPointRange()` 746528b96dSMatthew G. Knepley 756528b96dSMatthew G. Knepley Level: intermediate 766528b96dSMatthew G. Knepley 77cab54364SBarry Smith .seealso: [](sec_scatter), `IS`, `ISGetPointRange()`, `ISGetPointSubrange()`, `ISGetIndices()`, `ISCreateStride()` 786528b96dSMatthew G. Knepley @*/ 79cc4c1da9SBarry Smith PetscErrorCode ISRestorePointRange(IS pointIS, PetscInt *pStart, PetscInt *pEnd, const PetscInt *points[]) 80d71ae5a4SJacob Faibussowitsch { 819305a4c7SMatthew G. Knepley PetscInt step = 1; 829305a4c7SMatthew G. Knepley PetscBool isStride; 839305a4c7SMatthew G. Knepley 849305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)pointIS, ISSTRIDE, &isStride)); 869566063dSJacob Faibussowitsch if (isStride) PetscCall(ISStrideGetInfo(pointIS, pStart, &step)); 879566063dSJacob Faibussowitsch if (!isStride || step != 1) PetscCall(ISGetIndices(pointIS, points)); 883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 899305a4c7SMatthew G. Knepley } 909305a4c7SMatthew G. Knepley 91cc4c1da9SBarry Smith /*@ 92cab54364SBarry Smith ISGetPointSubrange - Configures the input `IS` to be a subrange for the traversal information given 936528b96dSMatthew G. Knepley 9420662ed9SBarry Smith Not Collective 956528b96dSMatthew G. Knepley 966528b96dSMatthew G. Knepley Input Parameters: 97cab54364SBarry Smith + subpointIS - The `IS` object to be configured 986528b96dSMatthew G. Knepley . pStart - The first index of the subrange 996528b96dSMatthew G. Knepley . pEnd - One past the last index for the subrange 100cab54364SBarry Smith - points - The indices for the entire range, from `ISGetPointRange()` 1016528b96dSMatthew G. Knepley 1026528b96dSMatthew G. Knepley Output Parameters: 103cab54364SBarry Smith . subpointIS - The `IS` object now configured to be a subrange 1046528b96dSMatthew G. Knepley 1056528b96dSMatthew G. Knepley Level: intermediate 1066528b96dSMatthew G. Knepley 107cab54364SBarry Smith Note: 108cab54364SBarry Smith The input `IS` will now respond properly to calls to `ISGetPointRange()` and return the subrange. 109cab54364SBarry Smith 110cab54364SBarry Smith .seealso: [](sec_scatter), `IS`, `ISGetPointRange()`, `ISRestorePointRange()`, `ISGetIndices()`, `ISCreateStride()` 1116528b96dSMatthew G. Knepley @*/ 112cc4c1da9SBarry Smith PetscErrorCode ISGetPointSubrange(IS subpointIS, PetscInt pStart, PetscInt pEnd, const PetscInt points[]) 113d71ae5a4SJacob Faibussowitsch { 1149305a4c7SMatthew G. Knepley PetscFunctionBeginHot; 1159305a4c7SMatthew G. Knepley if (points) { 1169566063dSJacob Faibussowitsch PetscCall(ISSetType(subpointIS, ISGENERAL)); 1179566063dSJacob Faibussowitsch PetscCall(ISGeneralSetIndices(subpointIS, pEnd - pStart, &points[pStart], PETSC_USE_POINTER)); 1189305a4c7SMatthew G. Knepley } else { 1199566063dSJacob Faibussowitsch PetscCall(ISSetType(subpointIS, ISSTRIDE)); 1209566063dSJacob Faibussowitsch PetscCall(ISStrideSetStride(subpointIS, pEnd - pStart, pStart, 1)); 1219305a4c7SMatthew G. Knepley } 1223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1239305a4c7SMatthew G. Knepley } 1249305a4c7SMatthew G. Knepley 125413f72f0SBarry Smith /* -----------------------------------------------------------------------------------------*/ 126413f72f0SBarry Smith 127413f72f0SBarry Smith /* 128413f72f0SBarry Smith Creates the global mapping information in the ISLocalToGlobalMapping structure 129413f72f0SBarry Smith 130413f72f0SBarry Smith If the user has not selected how to handle the global to local mapping then use HASH for "large" problems 131413f72f0SBarry Smith */ 132d71ae5a4SJacob Faibussowitsch static PetscErrorCode ISGlobalToLocalMappingSetUp(ISLocalToGlobalMapping mapping) 133d71ae5a4SJacob Faibussowitsch { 134413f72f0SBarry Smith PetscInt i, *idx = mapping->indices, n = mapping->n, end, start; 135413f72f0SBarry Smith 136413f72f0SBarry Smith PetscFunctionBegin; 1373ba16761SJacob Faibussowitsch if (mapping->data) PetscFunctionReturn(PETSC_SUCCESS); 138413f72f0SBarry Smith end = 0; 139413f72f0SBarry Smith start = PETSC_MAX_INT; 140413f72f0SBarry Smith 141413f72f0SBarry Smith for (i = 0; i < n; i++) { 142413f72f0SBarry Smith if (idx[i] < 0) continue; 143413f72f0SBarry Smith if (idx[i] < start) start = idx[i]; 144413f72f0SBarry Smith if (idx[i] > end) end = idx[i]; 145413f72f0SBarry Smith } 1469371c9d4SSatish Balay if (start > end) { 1479371c9d4SSatish Balay start = 0; 1489371c9d4SSatish Balay end = -1; 1499371c9d4SSatish Balay } 150413f72f0SBarry Smith mapping->globalstart = start; 151413f72f0SBarry Smith mapping->globalend = end; 152413f72f0SBarry Smith if (!((PetscObject)mapping)->type_name) { 153413f72f0SBarry Smith if ((end - start) > PetscMax(4 * n, 1000000)) { 1549566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(mapping, ISLOCALTOGLOBALMAPPINGHASH)); 155413f72f0SBarry Smith } else { 1569566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(mapping, ISLOCALTOGLOBALMAPPINGBASIC)); 157413f72f0SBarry Smith } 158413f72f0SBarry Smith } 159dbbe0bcdSBarry Smith PetscTryTypeMethod(mapping, globaltolocalmappingsetup); 1603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161413f72f0SBarry Smith } 162413f72f0SBarry Smith 163d71ae5a4SJacob Faibussowitsch static PetscErrorCode ISGlobalToLocalMappingSetUp_Basic(ISLocalToGlobalMapping mapping) 164d71ae5a4SJacob Faibussowitsch { 165413f72f0SBarry Smith PetscInt i, *idx = mapping->indices, n = mapping->n, end, start, *globals; 166413f72f0SBarry Smith ISLocalToGlobalMapping_Basic *map; 167413f72f0SBarry Smith 168413f72f0SBarry Smith PetscFunctionBegin; 169413f72f0SBarry Smith start = mapping->globalstart; 170413f72f0SBarry Smith end = mapping->globalend; 1719566063dSJacob Faibussowitsch PetscCall(PetscNew(&map)); 1729566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(end - start + 2, &globals)); 173413f72f0SBarry Smith map->globals = globals; 174413f72f0SBarry Smith for (i = 0; i < end - start + 1; i++) globals[i] = -1; 175413f72f0SBarry Smith for (i = 0; i < n; i++) { 176413f72f0SBarry Smith if (idx[i] < 0) continue; 177413f72f0SBarry Smith globals[idx[i] - start] = i; 178413f72f0SBarry Smith } 179413f72f0SBarry Smith mapping->data = (void *)map; 1803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 181413f72f0SBarry Smith } 182413f72f0SBarry Smith 183d71ae5a4SJacob Faibussowitsch static PetscErrorCode ISGlobalToLocalMappingSetUp_Hash(ISLocalToGlobalMapping mapping) 184d71ae5a4SJacob Faibussowitsch { 185413f72f0SBarry Smith PetscInt i, *idx = mapping->indices, n = mapping->n; 186413f72f0SBarry Smith ISLocalToGlobalMapping_Hash *map; 187413f72f0SBarry Smith 188413f72f0SBarry Smith PetscFunctionBegin; 1899566063dSJacob Faibussowitsch PetscCall(PetscNew(&map)); 1909566063dSJacob Faibussowitsch PetscCall(PetscHMapICreate(&map->globalht)); 191413f72f0SBarry Smith for (i = 0; i < n; i++) { 192413f72f0SBarry Smith if (idx[i] < 0) continue; 1939566063dSJacob Faibussowitsch PetscCall(PetscHMapISet(map->globalht, idx[i], i)); 194413f72f0SBarry Smith } 195413f72f0SBarry Smith mapping->data = (void *)map; 1963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 197413f72f0SBarry Smith } 198413f72f0SBarry Smith 199d71ae5a4SJacob Faibussowitsch static PetscErrorCode ISLocalToGlobalMappingDestroy_Basic(ISLocalToGlobalMapping mapping) 200d71ae5a4SJacob Faibussowitsch { 201413f72f0SBarry Smith ISLocalToGlobalMapping_Basic *map = (ISLocalToGlobalMapping_Basic *)mapping->data; 202413f72f0SBarry Smith 203413f72f0SBarry Smith PetscFunctionBegin; 2043ba16761SJacob Faibussowitsch if (!map) PetscFunctionReturn(PETSC_SUCCESS); 2059566063dSJacob Faibussowitsch PetscCall(PetscFree(map->globals)); 2069566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->data)); 2073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 208413f72f0SBarry Smith } 209413f72f0SBarry Smith 210d71ae5a4SJacob Faibussowitsch static PetscErrorCode ISLocalToGlobalMappingDestroy_Hash(ISLocalToGlobalMapping mapping) 211d71ae5a4SJacob Faibussowitsch { 212413f72f0SBarry Smith ISLocalToGlobalMapping_Hash *map = (ISLocalToGlobalMapping_Hash *)mapping->data; 213413f72f0SBarry Smith 214413f72f0SBarry Smith PetscFunctionBegin; 2153ba16761SJacob Faibussowitsch if (!map) PetscFunctionReturn(PETSC_SUCCESS); 2169566063dSJacob Faibussowitsch PetscCall(PetscHMapIDestroy(&map->globalht)); 2179566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->data)); 2183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 219413f72f0SBarry Smith } 220413f72f0SBarry Smith 2217de13914SStefano Zampini static PetscErrorCode ISLocalToGlobalMappingResetBlockInfo_Private(ISLocalToGlobalMapping mapping) 2227de13914SStefano Zampini { 2237de13914SStefano Zampini PetscFunctionBegin; 2247de13914SStefano Zampini PetscCall(PetscFree(mapping->info_procs)); 2257de13914SStefano Zampini PetscCall(PetscFree(mapping->info_numprocs)); 2267de13914SStefano Zampini if (mapping->info_indices) { 2277de13914SStefano Zampini for (PetscInt i = 0; i < mapping->info_nproc; i++) PetscCall(PetscFree(mapping->info_indices[i])); 2287de13914SStefano Zampini PetscCall(PetscFree(mapping->info_indices)); 2297de13914SStefano Zampini } 2307de13914SStefano Zampini if (mapping->info_nodei) PetscCall(PetscFree(mapping->info_nodei[0])); 2317de13914SStefano Zampini PetscCall(PetscFree2(mapping->info_nodec, mapping->info_nodei)); 232d4df40f3SStefano Zampini PetscCall(PetscSFDestroy(&mapping->multileaves_sf)); 2337de13914SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 2347de13914SStefano Zampini } 2357de13914SStefano Zampini 236413f72f0SBarry Smith #define GTOLTYPE _Basic 237413f72f0SBarry Smith #define GTOLNAME _Basic 238541bf97eSAdrian Croucher #define GTOLBS mapping->bs 2399371c9d4SSatish Balay #define GTOL(g, local) \ 2409371c9d4SSatish Balay do { \ 241413f72f0SBarry Smith local = map->globals[g / bs - start]; \ 2420040bde1SJunchao Zhang if (local >= 0) local = bs * local + (g % bs); \ 243413f72f0SBarry Smith } while (0) 244541bf97eSAdrian Croucher 245413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 246413f72f0SBarry Smith 247413f72f0SBarry Smith #define GTOLTYPE _Basic 248413f72f0SBarry Smith #define GTOLNAME Block_Basic 249541bf97eSAdrian Croucher #define GTOLBS 1 2509371c9d4SSatish Balay #define GTOL(g, local) \ 251d71ae5a4SJacob Faibussowitsch do { \ 252d71ae5a4SJacob Faibussowitsch local = map->globals[g - start]; \ 253d71ae5a4SJacob Faibussowitsch } while (0) 254413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 255413f72f0SBarry Smith 256413f72f0SBarry Smith #define GTOLTYPE _Hash 257413f72f0SBarry Smith #define GTOLNAME _Hash 258541bf97eSAdrian Croucher #define GTOLBS mapping->bs 2599371c9d4SSatish Balay #define GTOL(g, local) \ 2609371c9d4SSatish Balay do { \ 261e8f14785SLisandro Dalcin (void)PetscHMapIGet(map->globalht, g / bs, &local); \ 2620040bde1SJunchao Zhang if (local >= 0) local = bs * local + (g % bs); \ 263413f72f0SBarry Smith } while (0) 264413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 265413f72f0SBarry Smith 266413f72f0SBarry Smith #define GTOLTYPE _Hash 267413f72f0SBarry Smith #define GTOLNAME Block_Hash 268541bf97eSAdrian Croucher #define GTOLBS 1 2699371c9d4SSatish Balay #define GTOL(g, local) \ 270d71ae5a4SJacob Faibussowitsch do { \ 271d71ae5a4SJacob Faibussowitsch (void)PetscHMapIGet(map->globalht, g, &local); \ 272d71ae5a4SJacob Faibussowitsch } while (0) 273413f72f0SBarry Smith #include <../src/vec/is/utils/isltog.h> 274413f72f0SBarry Smith 2756658fb44Sstefano_zampini /*@ 2766658fb44Sstefano_zampini ISLocalToGlobalMappingDuplicate - Duplicates the local to global mapping object 2776658fb44Sstefano_zampini 2786658fb44Sstefano_zampini Not Collective 2796658fb44Sstefano_zampini 2806658fb44Sstefano_zampini Input Parameter: 2816658fb44Sstefano_zampini . ltog - local to global mapping 2826658fb44Sstefano_zampini 2836658fb44Sstefano_zampini Output Parameter: 2846658fb44Sstefano_zampini . nltog - the duplicated local to global mapping 2856658fb44Sstefano_zampini 2866658fb44Sstefano_zampini Level: advanced 2876658fb44Sstefano_zampini 288cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreate()` 2896658fb44Sstefano_zampini @*/ 290d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingDuplicate(ISLocalToGlobalMapping ltog, ISLocalToGlobalMapping *nltog) 291d71ae5a4SJacob Faibussowitsch { 292a0d79125SStefano Zampini ISLocalToGlobalMappingType l2gtype; 2936658fb44Sstefano_zampini 2946658fb44Sstefano_zampini PetscFunctionBegin; 2956658fb44Sstefano_zampini PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 2969566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(PetscObjectComm((PetscObject)ltog), ltog->bs, ltog->n, ltog->indices, PETSC_COPY_VALUES, nltog)); 2979566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetType(ltog, &l2gtype)); 2989566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingSetType(*nltog, l2gtype)); 2993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3006658fb44Sstefano_zampini } 3016658fb44Sstefano_zampini 302565245c5SBarry Smith /*@ 303107e9a97SBarry Smith ISLocalToGlobalMappingGetSize - Gets the local size of a local to global mapping 3043b9aefa3SBarry Smith 3053b9aefa3SBarry Smith Not Collective 3063b9aefa3SBarry Smith 3073b9aefa3SBarry Smith Input Parameter: 30838b5cf2dSJacob Faibussowitsch . mapping - local to global mapping 3093b9aefa3SBarry Smith 3103b9aefa3SBarry Smith Output Parameter: 311cab54364SBarry Smith . n - the number of entries in the local mapping, `ISLocalToGlobalMappingGetIndices()` returns an array of this length 3123b9aefa3SBarry Smith 3133b9aefa3SBarry Smith Level: advanced 3143b9aefa3SBarry Smith 315cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreate()` 3163b9aefa3SBarry Smith @*/ 317d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingGetSize(ISLocalToGlobalMapping mapping, PetscInt *n) 318d71ae5a4SJacob Faibussowitsch { 3193b9aefa3SBarry Smith PetscFunctionBegin; 3200700a824SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 3214f572ea9SToby Isaac PetscAssertPointer(n, 2); 322107e9a97SBarry Smith *n = mapping->bs * mapping->n; 3233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3243b9aefa3SBarry Smith } 3253b9aefa3SBarry Smith 326*ffeef943SBarry Smith /*@ 327cab54364SBarry Smith ISLocalToGlobalMappingViewFromOptions - View an `ISLocalToGlobalMapping` based on values in the options database 328fe2efc57SMark 329c3339decSBarry Smith Collective 330fe2efc57SMark 331fe2efc57SMark Input Parameters: 332fe2efc57SMark + A - the local to global mapping object 33320662ed9SBarry Smith . obj - Optional object that provides the options prefix used for the options database query 334736c3998SJose E. Roman - name - command line option 335fe2efc57SMark 336fe2efc57SMark Level: intermediate 337cab54364SBarry Smith 33820662ed9SBarry Smith Note: 33920662ed9SBarry Smith See `PetscObjectViewFromOptions()` for the available `PetscViewer` and `PetscViewerFormat` 34020662ed9SBarry Smith 34120662ed9SBarry Smith .seealso: [](sec_scatter), `PetscViewer`, ``ISLocalToGlobalMapping`, `ISLocalToGlobalMappingView`, `PetscObjectViewFromOptions()`, `ISLocalToGlobalMappingCreate()` 342fe2efc57SMark @*/ 343d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingViewFromOptions(ISLocalToGlobalMapping A, PetscObject obj, const char name[]) 344d71ae5a4SJacob Faibussowitsch { 345fe2efc57SMark PetscFunctionBegin; 346fe2efc57SMark PetscValidHeaderSpecific(A, IS_LTOGM_CLASSID, 1); 3479566063dSJacob Faibussowitsch PetscCall(PetscObjectViewFromOptions((PetscObject)A, obj, name)); 3483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 349fe2efc57SMark } 350fe2efc57SMark 351*ffeef943SBarry Smith /*@ 3525a5d4f66SBarry Smith ISLocalToGlobalMappingView - View a local to global mapping 3535a5d4f66SBarry Smith 3547de13914SStefano Zampini Collective on viewer 355b9cd556bSLois Curfman McInnes 3565a5d4f66SBarry Smith Input Parameters: 35738b5cf2dSJacob Faibussowitsch + mapping - local to global mapping 3583b9aefa3SBarry Smith - viewer - viewer 3595a5d4f66SBarry Smith 3607de13914SStefano Zampini Level: intermediate 361a997ad1aSLois Curfman McInnes 36220662ed9SBarry Smith .seealso: [](sec_scatter), `PetscViewer`, `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreate()` 3635a5d4f66SBarry Smith @*/ 364d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingView(ISLocalToGlobalMapping mapping, PetscViewer viewer) 365d71ae5a4SJacob Faibussowitsch { 3667de13914SStefano Zampini PetscBool iascii, isbinary; 3677de13914SStefano Zampini PetscViewerFormat format; 3685a5d4f66SBarry Smith 3695a5d4f66SBarry Smith PetscFunctionBegin; 3700700a824SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 37148a46eb9SPierre Jolivet if (!viewer) PetscCall(PetscViewerASCIIGetStdout(PetscObjectComm((PetscObject)mapping), &viewer)); 3720700a824SBarry Smith PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 3735a5d4f66SBarry Smith 3749566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 3757de13914SStefano Zampini PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 3767de13914SStefano Zampini PetscCall(PetscViewerGetFormat(viewer, &format)); 37732077d6dSBarry Smith if (iascii) { 3787de13914SStefano Zampini if (format == PETSC_VIEWER_ASCII_MATLAB) { 3797de13914SStefano Zampini const PetscInt *idxs; 3807de13914SStefano Zampini IS is; 3817de13914SStefano Zampini const char *name = ((PetscObject)mapping)->name; 3827de13914SStefano Zampini char iname[PETSC_MAX_PATH_LEN]; 3837de13914SStefano Zampini 3847de13914SStefano Zampini PetscCall(PetscSNPrintf(iname, sizeof(iname), "%sl2g", name ? name : "")); 3857de13914SStefano Zampini PetscCall(ISLocalToGlobalMappingGetIndices(mapping, &idxs)); 3867de13914SStefano Zampini PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)viewer), mapping->n * mapping->bs, idxs, PETSC_USE_POINTER, &is)); 3877de13914SStefano Zampini PetscCall(PetscObjectSetName((PetscObject)is, iname)); 3887de13914SStefano Zampini PetscCall(ISView(is, viewer)); 3897de13914SStefano Zampini PetscCall(ISLocalToGlobalMappingRestoreIndices(mapping, &idxs)); 3907de13914SStefano Zampini PetscCall(ISDestroy(&is)); 3917de13914SStefano Zampini } else { 3927de13914SStefano Zampini PetscMPIInt rank; 3937de13914SStefano Zampini 3947de13914SStefano Zampini PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mapping), &rank)); 3959566063dSJacob Faibussowitsch PetscCall(PetscObjectPrintClassNamePrefixType((PetscObject)mapping, viewer)); 3969566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 3977de13914SStefano Zampini for (PetscInt i = 0; i < mapping->n; i++) { 398f2c6b1a2SJed Brown PetscInt bs = mapping->bs, g = mapping->indices[i]; 399f2c6b1a2SJed Brown if (bs == 1) PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, "[%d] %" PetscInt_FMT " %" PetscInt_FMT "\n", rank, i, g)); 400f2c6b1a2SJed Brown else PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, "[%d] %" PetscInt_FMT ":%" PetscInt_FMT " %" PetscInt_FMT ":%" PetscInt_FMT "\n", rank, i * bs, (i + 1) * bs, g * bs, (g + 1) * bs)); 401f2c6b1a2SJed Brown } 4029566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 4039566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 4041575c14dSBarry Smith } 4057de13914SStefano Zampini } else if (isbinary) { 4067de13914SStefano Zampini PetscBool skipHeader; 4077de13914SStefano Zampini 4087de13914SStefano Zampini PetscCall(PetscViewerSetUp(viewer)); 4097de13914SStefano Zampini PetscCall(PetscViewerBinaryGetSkipHeader(viewer, &skipHeader)); 4107de13914SStefano Zampini if (!skipHeader) { 4117de13914SStefano Zampini PetscMPIInt size; 4127de13914SStefano Zampini PetscInt tr[3]; 4137de13914SStefano Zampini 4147de13914SStefano Zampini PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)viewer), &size)); 4157de13914SStefano Zampini tr[0] = IS_LTOGM_FILE_CLASSID; 4167de13914SStefano Zampini tr[1] = mapping->bs; 4177de13914SStefano Zampini tr[2] = size; 4187de13914SStefano Zampini PetscCall(PetscViewerBinaryWrite(viewer, tr, 3, PETSC_INT)); 4197de13914SStefano Zampini PetscCall(PetscViewerBinaryWriteAll(viewer, &mapping->n, 1, PETSC_DETERMINE, PETSC_DETERMINE, PETSC_INT)); 4207de13914SStefano Zampini } 4217de13914SStefano Zampini /* write block indices */ 4227de13914SStefano Zampini PetscCall(PetscViewerBinaryWriteAll(viewer, mapping->indices, mapping->n, PETSC_DETERMINE, PETSC_DETERMINE, PETSC_INT)); 4237de13914SStefano Zampini } 4247de13914SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 4257de13914SStefano Zampini } 4267de13914SStefano Zampini 4277de13914SStefano Zampini /*@ 4287de13914SStefano Zampini ISLocalToGlobalMappingLoad - Loads a local-to-global mapping that has been stored in binary format. 4297de13914SStefano Zampini 4307de13914SStefano Zampini Collective on viewer 4317de13914SStefano Zampini 4327de13914SStefano Zampini Input Parameters: 4337de13914SStefano Zampini + mapping - the newly loaded map, this needs to have been created with `ISLocalToGlobalMappingCreate()` or some related function before a call to `ISLocalToGlobalMappingLoad()` 4347de13914SStefano Zampini - viewer - binary file viewer, obtained from `PetscViewerBinaryOpen()` 4357de13914SStefano Zampini 4367de13914SStefano Zampini Level: intermediate 4377de13914SStefano Zampini 4387de13914SStefano Zampini .seealso: [](sec_scatter), `PetscViewer`, `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingView()`, `ISLocalToGlobalMappingCreate()` 4397de13914SStefano Zampini @*/ 4407de13914SStefano Zampini PetscErrorCode ISLocalToGlobalMappingLoad(ISLocalToGlobalMapping mapping, PetscViewer viewer) 4417de13914SStefano Zampini { 4427de13914SStefano Zampini PetscBool isbinary, skipHeader; 4437de13914SStefano Zampini 4447de13914SStefano Zampini PetscFunctionBegin; 4457de13914SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 4467de13914SStefano Zampini PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 4477de13914SStefano Zampini PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 4487de13914SStefano Zampini PetscCheck(isbinary, PetscObjectComm((PetscObject)viewer), PETSC_ERR_SUP, "Invalid viewer of type %s", ((PetscObject)viewer)->type_name); 4497de13914SStefano Zampini 4507de13914SStefano Zampini /* reset previous data */ 4517de13914SStefano Zampini PetscCall(ISLocalToGlobalMappingResetBlockInfo_Private(mapping)); 4527de13914SStefano Zampini 4537de13914SStefano Zampini PetscCall(PetscViewerSetUp(viewer)); 4547de13914SStefano Zampini PetscCall(PetscViewerBinaryGetSkipHeader(viewer, &skipHeader)); 4557de13914SStefano Zampini 4567de13914SStefano Zampini /* When skipping header, it assumes bs and n have been already set */ 4577de13914SStefano Zampini if (!skipHeader) { 4587de13914SStefano Zampini MPI_Comm comm = PetscObjectComm((PetscObject)viewer); 4597de13914SStefano Zampini PetscInt tr[3], nold = mapping->n, *sizes, nmaps = PETSC_DECIDE, st = 0; 4607de13914SStefano Zampini 4617de13914SStefano Zampini PetscCall(PetscViewerBinaryRead(viewer, tr, 3, NULL, PETSC_INT)); 4627de13914SStefano Zampini PetscCheck(tr[0] == IS_LTOGM_FILE_CLASSID, PETSC_COMM_SELF, PETSC_ERR_FILE_UNEXPECTED, "Not a local-to-global map next in file"); 4637de13914SStefano Zampini 4647de13914SStefano Zampini mapping->bs = tr[1]; 4657de13914SStefano Zampini PetscCall(PetscMalloc1(tr[2], &sizes)); 4667de13914SStefano Zampini PetscCall(PetscViewerBinaryRead(viewer, sizes, tr[2], NULL, PETSC_INT)); 4677de13914SStefano Zampini 4687de13914SStefano Zampini /* consume the input, read multiple maps per process if needed */ 4697de13914SStefano Zampini PetscCall(PetscSplitOwnership(comm, &nmaps, &tr[2])); 4707de13914SStefano Zampini PetscCallMPI(MPI_Exscan(&nmaps, &st, 1, MPIU_INT, MPI_SUM, comm)); 4717de13914SStefano Zampini mapping->n = 0; 4727de13914SStefano Zampini for (PetscInt i = st; i < st + nmaps; i++) mapping->n += sizes[i]; 4737de13914SStefano Zampini PetscCall(PetscFree(sizes)); 4747de13914SStefano Zampini 4757de13914SStefano Zampini if (nold != mapping->n) { 4767de13914SStefano Zampini if (mapping->dealloc_indices) PetscCall(PetscFree(mapping->indices)); 4777de13914SStefano Zampini mapping->indices = NULL; 4787de13914SStefano Zampini } 4797de13914SStefano Zampini } 4807de13914SStefano Zampini 4817de13914SStefano Zampini /* read indices */ 4827de13914SStefano Zampini if (mapping->n && !mapping->indices) { 4837de13914SStefano Zampini PetscCall(PetscMalloc1(mapping->n, &mapping->indices)); 4847de13914SStefano Zampini mapping->dealloc_indices = PETSC_TRUE; 4857de13914SStefano Zampini } 4867de13914SStefano Zampini PetscCall(PetscViewerBinaryReadAll(viewer, mapping->indices, mapping->n, PETSC_DETERMINE, PETSC_DETERMINE, PETSC_INT)); 4873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4885a5d4f66SBarry Smith } 4895a5d4f66SBarry Smith 4901f428162SBarry Smith /*@ 4912bdab257SBarry Smith ISLocalToGlobalMappingCreateIS - Creates a mapping between a local (0 to n) 4922bdab257SBarry Smith ordering and a global parallel ordering. 4932bdab257SBarry Smith 49420662ed9SBarry Smith Not Collective 495b9cd556bSLois Curfman McInnes 496a997ad1aSLois Curfman McInnes Input Parameter: 4978c03b21aSDmitry Karpeev . is - index set containing the global numbers for each local number 4982bdab257SBarry Smith 499a997ad1aSLois Curfman McInnes Output Parameter: 5002bdab257SBarry Smith . mapping - new mapping data structure 5012bdab257SBarry Smith 502a997ad1aSLois Curfman McInnes Level: advanced 503a997ad1aSLois Curfman McInnes 504cab54364SBarry Smith Note: 505cab54364SBarry Smith the block size of the `IS` determines the block size of the mapping 506cab54364SBarry Smith 507cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingSetFromOptions()` 5082bdab257SBarry Smith @*/ 509d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingCreateIS(IS is, ISLocalToGlobalMapping *mapping) 510d71ae5a4SJacob Faibussowitsch { 5113bbf0e92SBarry Smith PetscInt n, bs; 5125d0c19d7SBarry Smith const PetscInt *indices; 5132bdab257SBarry Smith MPI_Comm comm; 5143bbf0e92SBarry Smith PetscBool isblock; 5153a40ed3dSBarry Smith 5163a40ed3dSBarry Smith PetscFunctionBegin; 5170700a824SBarry Smith PetscValidHeaderSpecific(is, IS_CLASSID, 1); 5184f572ea9SToby Isaac PetscAssertPointer(mapping, 2); 5192bdab257SBarry Smith 5209566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)is, &comm)); 5219566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is, &n)); 5229566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)is, ISBLOCK, &isblock)); 5236006e8d2SBarry Smith if (!isblock) { 5249566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &indices)); 5259566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm, 1, n, indices, PETSC_COPY_VALUES, mapping)); 5269566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &indices)); 5276006e8d2SBarry Smith } else { 5289566063dSJacob Faibussowitsch PetscCall(ISGetBlockSize(is, &bs)); 5299566063dSJacob Faibussowitsch PetscCall(ISBlockGetIndices(is, &indices)); 5309566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm, bs, n / bs, indices, PETSC_COPY_VALUES, mapping)); 5319566063dSJacob Faibussowitsch PetscCall(ISBlockRestoreIndices(is, &indices)); 5326006e8d2SBarry Smith } 5333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5342bdab257SBarry Smith } 5355a5d4f66SBarry Smith 536cc4c1da9SBarry Smith /*@ 537d4df40f3SStefano Zampini ISLocalToGlobalMappingCreateSF - Creates a mapping between a local (0 to n) ordering and a global parallel ordering induced by a star forest. 538a4d96a55SJed Brown 539a4d96a55SJed Brown Collective 540a4d96a55SJed Brown 541d8d19677SJose E. Roman Input Parameters: 542a4d96a55SJed Brown + sf - star forest mapping contiguous local indices to (rank, offset) 543cab54364SBarry Smith - start - first global index on this process, or `PETSC_DECIDE` to compute contiguous global numbering automatically 544a4d96a55SJed Brown 545a4d96a55SJed Brown Output Parameter: 546a4d96a55SJed Brown . mapping - new mapping data structure 547a4d96a55SJed Brown 548a4d96a55SJed Brown Level: advanced 549a4d96a55SJed Brown 55020662ed9SBarry Smith Note: 551633354d9SStefano Zampini If a process calls this function with `start` = `PETSC_DECIDE` then all processes must, otherwise the program will hang. 5529a535bafSVaclav Hapla 553cab54364SBarry Smith .seealso: [](sec_scatter), `PetscSF`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingSetFromOptions()` 554a4d96a55SJed Brown @*/ 555d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingCreateSF(PetscSF sf, PetscInt start, ISLocalToGlobalMapping *mapping) 556d71ae5a4SJacob Faibussowitsch { 557a4d96a55SJed Brown PetscInt i, maxlocal, nroots, nleaves, *globals, *ltog; 558a4d96a55SJed Brown MPI_Comm comm; 559a4d96a55SJed Brown 560a4d96a55SJed Brown PetscFunctionBegin; 561a4d96a55SJed Brown PetscValidHeaderSpecific(sf, PETSCSF_CLASSID, 1); 5624f572ea9SToby Isaac PetscAssertPointer(mapping, 3); 5639566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)sf, &comm)); 56441f4c31fSVaclav Hapla PetscCall(PetscSFGetGraph(sf, &nroots, &nleaves, NULL, NULL)); 5659a535bafSVaclav Hapla if (start == PETSC_DECIDE) { 5669a535bafSVaclav Hapla start = 0; 5679566063dSJacob Faibussowitsch PetscCallMPI(MPI_Exscan(&nroots, &start, 1, MPIU_INT, MPI_SUM, comm)); 56841f4c31fSVaclav Hapla } else PetscCheck(start >= 0, comm, PETSC_ERR_ARG_OUTOFRANGE, "start must be nonnegative or PETSC_DECIDE"); 56941f4c31fSVaclav Hapla PetscCall(PetscSFGetLeafRange(sf, NULL, &maxlocal)); 57041f4c31fSVaclav Hapla ++maxlocal; 5719566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nroots, &globals)); 5729566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(maxlocal, <og)); 573a4d96a55SJed Brown for (i = 0; i < nroots; i++) globals[i] = start + i; 574a4d96a55SJed Brown for (i = 0; i < maxlocal; i++) ltog[i] = -1; 5759566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(sf, MPIU_INT, globals, ltog, MPI_REPLACE)); 5769566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(sf, MPIU_INT, globals, ltog, MPI_REPLACE)); 5779566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm, 1, maxlocal, ltog, PETSC_OWN_POINTER, mapping)); 5789566063dSJacob Faibussowitsch PetscCall(PetscFree(globals)); 5793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 580a4d96a55SJed Brown } 581b46b645bSBarry Smith 58263fa5c83Sstefano_zampini /*@ 58363fa5c83Sstefano_zampini ISLocalToGlobalMappingSetBlockSize - Sets the blocksize of the mapping 58463fa5c83Sstefano_zampini 58520662ed9SBarry Smith Not Collective 58663fa5c83Sstefano_zampini 58763fa5c83Sstefano_zampini Input Parameters: 588a2b725a8SWilliam Gropp + mapping - mapping data structure 589a2b725a8SWilliam Gropp - bs - the blocksize 59063fa5c83Sstefano_zampini 59163fa5c83Sstefano_zampini Level: advanced 59263fa5c83Sstefano_zampini 593cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()` 59463fa5c83Sstefano_zampini @*/ 595d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingSetBlockSize(ISLocalToGlobalMapping mapping, PetscInt bs) 596d71ae5a4SJacob Faibussowitsch { 597a59f3c4dSstefano_zampini PetscInt *nid; 598a59f3c4dSstefano_zampini const PetscInt *oid; 599a59f3c4dSstefano_zampini PetscInt i, cn, on, obs, nn; 60063fa5c83Sstefano_zampini 60163fa5c83Sstefano_zampini PetscFunctionBegin; 60263fa5c83Sstefano_zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 60308401ef6SPierre Jolivet PetscCheck(bs >= 1, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Invalid block size %" PetscInt_FMT, bs); 6043ba16761SJacob Faibussowitsch if (bs == mapping->bs) PetscFunctionReturn(PETSC_SUCCESS); 60563fa5c83Sstefano_zampini on = mapping->n; 60663fa5c83Sstefano_zampini obs = mapping->bs; 60763fa5c83Sstefano_zampini oid = mapping->indices; 60863fa5c83Sstefano_zampini nn = (on * obs) / bs; 60908401ef6SPierre Jolivet PetscCheck((on * obs) % bs == 0, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Block size %" PetscInt_FMT " is inconsistent with block size %" PetscInt_FMT " and number of block indices %" PetscInt_FMT, bs, obs, on); 610a59f3c4dSstefano_zampini 6119566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nn, &nid)); 6129566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(mapping, &oid)); 613a59f3c4dSstefano_zampini for (i = 0; i < nn; i++) { 614a59f3c4dSstefano_zampini PetscInt j; 615a59f3c4dSstefano_zampini for (j = 0, cn = 0; j < bs - 1; j++) { 6169371c9d4SSatish Balay if (oid[i * bs + j] < 0) { 6179371c9d4SSatish Balay cn++; 6189371c9d4SSatish Balay continue; 6199371c9d4SSatish Balay } 62008401ef6SPierre Jolivet PetscCheck(oid[i * bs + j] == oid[i * bs + j + 1] - 1, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Block sizes %" PetscInt_FMT " and %" PetscInt_FMT " are incompatible with the block indices: non consecutive indices %" PetscInt_FMT " %" PetscInt_FMT, bs, obs, oid[i * bs + j], oid[i * bs + j + 1]); 621a59f3c4dSstefano_zampini } 622a59f3c4dSstefano_zampini if (oid[i * bs + j] < 0) cn++; 6238b7cb0e6Sstefano_zampini if (cn) { 62408401ef6SPierre Jolivet PetscCheck(cn == bs, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Block sizes %" PetscInt_FMT " and %" PetscInt_FMT " are incompatible with the block indices: invalid number of negative entries in block %" PetscInt_FMT, bs, obs, cn); 625a59f3c4dSstefano_zampini nid[i] = -1; 6268b7cb0e6Sstefano_zampini } else { 627a59f3c4dSstefano_zampini nid[i] = oid[i * bs] / bs; 62863fa5c83Sstefano_zampini } 62963fa5c83Sstefano_zampini } 6309566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(mapping, &oid)); 631a59f3c4dSstefano_zampini 63263fa5c83Sstefano_zampini mapping->n = nn; 63363fa5c83Sstefano_zampini mapping->bs = bs; 6349566063dSJacob Faibussowitsch PetscCall(PetscFree(mapping->indices)); 63563fa5c83Sstefano_zampini mapping->indices = nid; 636c9345713Sstefano_zampini mapping->globalstart = 0; 637c9345713Sstefano_zampini mapping->globalend = 0; 6381bd0b88eSStefano Zampini 6391bd0b88eSStefano Zampini /* reset the cached information */ 640633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingResetBlockInfo_Private(mapping)); 641dbbe0bcdSBarry Smith PetscTryTypeMethod(mapping, destroy); 6423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 64363fa5c83Sstefano_zampini } 64463fa5c83Sstefano_zampini 64545b6f7e9SBarry Smith /*@ 64645b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockSize - Gets the blocksize of the mapping 64745b6f7e9SBarry Smith ordering and a global parallel ordering. 64845b6f7e9SBarry Smith 64945b6f7e9SBarry Smith Not Collective 65045b6f7e9SBarry Smith 6512fe279fdSBarry Smith Input Parameter: 65245b6f7e9SBarry Smith . mapping - mapping data structure 65345b6f7e9SBarry Smith 65445b6f7e9SBarry Smith Output Parameter: 65545b6f7e9SBarry Smith . bs - the blocksize 65645b6f7e9SBarry Smith 65745b6f7e9SBarry Smith Level: advanced 65845b6f7e9SBarry Smith 659cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()` 66045b6f7e9SBarry Smith @*/ 661d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingGetBlockSize(ISLocalToGlobalMapping mapping, PetscInt *bs) 662d71ae5a4SJacob Faibussowitsch { 66345b6f7e9SBarry Smith PetscFunctionBegin; 664cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 66545b6f7e9SBarry Smith *bs = mapping->bs; 6663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 66745b6f7e9SBarry Smith } 66845b6f7e9SBarry Smith 669ba5bb76aSSatish Balay /*@ 67090f02eecSBarry Smith ISLocalToGlobalMappingCreate - Creates a mapping between a local (0 to n) 67190f02eecSBarry Smith ordering and a global parallel ordering. 6722362add9SBarry Smith 67389d82c54SBarry Smith Not Collective, but communicator may have more than one process 674b9cd556bSLois Curfman McInnes 6752362add9SBarry Smith Input Parameters: 67689d82c54SBarry Smith + comm - MPI communicator 677f0413b6fSBarry Smith . bs - the block size 67828bc9809SBarry Smith . n - the number of local elements divided by the block size, or equivalently the number of block indices 67928bc9809SBarry Smith . indices - the global index for each local element, these do not need to be in increasing order (sorted), these values should not be scaled (i.e. multiplied) by the blocksize bs 680d5ad8652SBarry Smith - mode - see PetscCopyMode 6812362add9SBarry Smith 682a997ad1aSLois Curfman McInnes Output Parameter: 68390f02eecSBarry Smith . mapping - new mapping data structure 6842362add9SBarry Smith 685cab54364SBarry Smith Level: advanced 686cab54364SBarry Smith 68795452b02SPatrick Sanan Notes: 68895452b02SPatrick Sanan There is one integer value in indices per block and it represents the actual indices bs*idx + j, where j=0,..,bs-1 689413f72f0SBarry Smith 690cab54364SBarry Smith For "small" problems when using `ISGlobalToLocalMappingApply()` and `ISGlobalToLocalMappingApplyBlock()`, the `ISLocalToGlobalMappingType` 691cab54364SBarry Smith of `ISLOCALTOGLOBALMAPPINGBASIC` will be used; this uses more memory but is faster; this approach is not scalable for extremely large mappings. 692413f72f0SBarry Smith 693cab54364SBarry Smith For large problems `ISLOCALTOGLOBALMAPPINGHASH` is used, this is scalable. 69420662ed9SBarry Smith Use `ISLocalToGlobalMappingSetType()` or call `ISLocalToGlobalMappingSetFromOptions()` with the option 69520662ed9SBarry Smith `-islocaltoglobalmapping_type` <`basic`,`hash`> to control which is used. 696a997ad1aSLois Curfman McInnes 69720662ed9SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingSetFromOptions()`, 69820662ed9SBarry Smith `ISLOCALTOGLOBALMAPPINGBASIC`, `ISLOCALTOGLOBALMAPPINGHASH` 699db781477SPatrick Sanan `ISLocalToGlobalMappingSetType()`, `ISLocalToGlobalMappingType` 7002362add9SBarry Smith @*/ 701d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingCreate(MPI_Comm comm, PetscInt bs, PetscInt n, const PetscInt indices[], PetscCopyMode mode, ISLocalToGlobalMapping *mapping) 702d71ae5a4SJacob Faibussowitsch { 70332dcc486SBarry Smith PetscInt *in; 704b46b645bSBarry Smith 705b46b645bSBarry Smith PetscFunctionBegin; 7064f572ea9SToby Isaac if (n) PetscAssertPointer(indices, 4); 7074f572ea9SToby Isaac PetscAssertPointer(mapping, 6); 708b46b645bSBarry Smith 7090298fd71SBarry Smith *mapping = NULL; 7109566063dSJacob Faibussowitsch PetscCall(ISInitializePackage()); 7112362add9SBarry Smith 7129566063dSJacob Faibussowitsch PetscCall(PetscHeaderCreate(*mapping, IS_LTOGM_CLASSID, "ISLocalToGlobalMapping", "Local to global mapping", "IS", comm, ISLocalToGlobalMappingDestroy, ISLocalToGlobalMappingView)); 713d4bb536fSBarry Smith (*mapping)->n = n; 714f0413b6fSBarry Smith (*mapping)->bs = bs; 715d5ad8652SBarry Smith if (mode == PETSC_COPY_VALUES) { 7169566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &in)); 7179566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(in, indices, n)); 718d5ad8652SBarry Smith (*mapping)->indices = in; 71971910c26SVaclav Hapla (*mapping)->dealloc_indices = PETSC_TRUE; 7206389a1a1SBarry Smith } else if (mode == PETSC_OWN_POINTER) { 7216389a1a1SBarry Smith (*mapping)->indices = (PetscInt *)indices; 72271910c26SVaclav Hapla (*mapping)->dealloc_indices = PETSC_TRUE; 72371910c26SVaclav Hapla } else if (mode == PETSC_USE_POINTER) { 72471910c26SVaclav Hapla (*mapping)->indices = (PetscInt *)indices; 7259371c9d4SSatish Balay } else SETERRQ(comm, PETSC_ERR_ARG_OUTOFRANGE, "Invalid mode %d", mode); 7263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7272362add9SBarry Smith } 7282362add9SBarry Smith 729413f72f0SBarry Smith PetscFunctionList ISLocalToGlobalMappingList = NULL; 730413f72f0SBarry Smith 73190f02eecSBarry Smith /*@ 7327e99dc12SLawrence Mitchell ISLocalToGlobalMappingSetFromOptions - Set mapping options from the options database. 7337e99dc12SLawrence Mitchell 73420662ed9SBarry Smith Not Collective 7357e99dc12SLawrence Mitchell 7362fe279fdSBarry Smith Input Parameter: 7377e99dc12SLawrence Mitchell . mapping - mapping data structure 7387e99dc12SLawrence Mitchell 73920662ed9SBarry Smith Options Database Key: 74020662ed9SBarry Smith . -islocaltoglobalmapping_type - <basic,hash> nonscalable and scalable versions 74120662ed9SBarry Smith 7427e99dc12SLawrence Mitchell Level: advanced 7437e99dc12SLawrence Mitchell 74442747ad1SJacob Faibussowitsch .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingDestroy()`, 74542747ad1SJacob Faibussowitsch `ISLocalToGlobalMappingCreateIS()`, `ISLOCALTOGLOBALMAPPINGBASIC`, 74642747ad1SJacob Faibussowitsch `ISLOCALTOGLOBALMAPPINGHASH`, `ISLocalToGlobalMappingSetType()`, `ISLocalToGlobalMappingType` 7477e99dc12SLawrence Mitchell @*/ 748d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingSetFromOptions(ISLocalToGlobalMapping mapping) 749d71ae5a4SJacob Faibussowitsch { 750413f72f0SBarry Smith char type[256]; 751413f72f0SBarry Smith ISLocalToGlobalMappingType defaulttype = "Not set"; 7527e99dc12SLawrence Mitchell PetscBool flg; 7537e99dc12SLawrence Mitchell 7547e99dc12SLawrence Mitchell PetscFunctionBegin; 7557e99dc12SLawrence Mitchell PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 7569566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegisterAll()); 757d0609cedSBarry Smith PetscObjectOptionsBegin((PetscObject)mapping); 7589566063dSJacob Faibussowitsch PetscCall(PetscOptionsFList("-islocaltoglobalmapping_type", "ISLocalToGlobalMapping method", "ISLocalToGlobalMappingSetType", ISLocalToGlobalMappingList, (char *)(((PetscObject)mapping)->type_name) ? ((PetscObject)mapping)->type_name : defaulttype, type, 256, &flg)); 7591baa6e33SBarry Smith if (flg) PetscCall(ISLocalToGlobalMappingSetType(mapping, type)); 760d0609cedSBarry Smith PetscOptionsEnd(); 7613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7627e99dc12SLawrence Mitchell } 7637e99dc12SLawrence Mitchell 7647e99dc12SLawrence Mitchell /*@ 76590f02eecSBarry Smith ISLocalToGlobalMappingDestroy - Destroys a mapping between a local (0 to n) 76690f02eecSBarry Smith ordering and a global parallel ordering. 76790f02eecSBarry Smith 76820662ed9SBarry Smith Not Collective 769b9cd556bSLois Curfman McInnes 7702fe279fdSBarry Smith Input Parameter: 77190f02eecSBarry Smith . mapping - mapping data structure 77290f02eecSBarry Smith 773a997ad1aSLois Curfman McInnes Level: advanced 774a997ad1aSLois Curfman McInnes 775cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingCreate()` 77690f02eecSBarry Smith @*/ 777d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingDestroy(ISLocalToGlobalMapping *mapping) 778d71ae5a4SJacob Faibussowitsch { 7793a40ed3dSBarry Smith PetscFunctionBegin; 7803ba16761SJacob Faibussowitsch if (!*mapping) PetscFunctionReturn(PETSC_SUCCESS); 781f4f49eeaSPierre Jolivet PetscValidHeaderSpecific(*mapping, IS_LTOGM_CLASSID, 1); 782f4f49eeaSPierre Jolivet if (--((PetscObject)*mapping)->refct > 0) { 7839371c9d4SSatish Balay *mapping = NULL; 7843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 78571910c26SVaclav Hapla } 78648a46eb9SPierre Jolivet if ((*mapping)->dealloc_indices) PetscCall(PetscFree((*mapping)->indices)); 787633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingResetBlockInfo_Private(*mapping)); 788213acdd3SPierre Jolivet PetscTryTypeMethod(*mapping, destroy); 7899566063dSJacob Faibussowitsch PetscCall(PetscHeaderDestroy(mapping)); 7903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 79190f02eecSBarry Smith } 79290f02eecSBarry Smith 79390f02eecSBarry Smith /*@ 794cab54364SBarry Smith ISLocalToGlobalMappingApplyIS - Creates from an `IS` in the local numbering 795cab54364SBarry Smith a new index set using the global numbering defined in an `ISLocalToGlobalMapping` 7963acfe500SLois Curfman McInnes context. 79790f02eecSBarry Smith 798c3339decSBarry Smith Collective 799b9cd556bSLois Curfman McInnes 80090f02eecSBarry Smith Input Parameters: 801b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 802b9cd556bSLois Curfman McInnes - is - index set in local numbering 80390f02eecSBarry Smith 804cab54364SBarry Smith Output Parameter: 80590f02eecSBarry Smith . newis - index set in global numbering 80690f02eecSBarry Smith 807a997ad1aSLois Curfman McInnes Level: advanced 808a997ad1aSLois Curfman McInnes 809cab54364SBarry Smith Note: 81020662ed9SBarry Smith The output `IS` will have the same communicator as the input `IS`. 811cab54364SBarry Smith 812cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingCreate()`, 813db781477SPatrick Sanan `ISLocalToGlobalMappingDestroy()`, `ISGlobalToLocalMappingApply()` 81490f02eecSBarry Smith @*/ 815d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingApplyIS(ISLocalToGlobalMapping mapping, IS is, IS *newis) 816d71ae5a4SJacob Faibussowitsch { 817e24637baSBarry Smith PetscInt n, *idxout; 8185d0c19d7SBarry Smith const PetscInt *idxin; 8193a40ed3dSBarry Smith 8203a40ed3dSBarry Smith PetscFunctionBegin; 8210700a824SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 8220700a824SBarry Smith PetscValidHeaderSpecific(is, IS_CLASSID, 2); 8234f572ea9SToby Isaac PetscAssertPointer(newis, 3); 82490f02eecSBarry Smith 8259566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is, &n)); 8269566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &idxin)); 8279566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &idxout)); 8289566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingApply(mapping, n, idxin, idxout)); 8299566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &idxin)); 8309566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PetscObjectComm((PetscObject)is), n, idxout, PETSC_OWN_POINTER, newis)); 8313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 83290f02eecSBarry Smith } 83390f02eecSBarry Smith 834b89cb25eSSatish Balay /*@ 8353acfe500SLois Curfman McInnes ISLocalToGlobalMappingApply - Takes a list of integers in a local numbering 8363acfe500SLois Curfman McInnes and converts them to the global numbering. 83790f02eecSBarry Smith 83820662ed9SBarry Smith Not Collective 839b9cd556bSLois Curfman McInnes 840bb25748dSBarry Smith Input Parameters: 841b9cd556bSLois Curfman McInnes + mapping - the local to global mapping context 842bb25748dSBarry Smith . N - number of integers 843b9cd556bSLois Curfman McInnes - in - input indices in local numbering 844bb25748dSBarry Smith 845bb25748dSBarry Smith Output Parameter: 846bb25748dSBarry Smith . out - indices in global numbering 847bb25748dSBarry Smith 848a997ad1aSLois Curfman McInnes Level: advanced 849a997ad1aSLois Curfman McInnes 850cab54364SBarry Smith Note: 85120662ed9SBarry Smith The `in` and `out` array parameters may be identical. 852cab54364SBarry Smith 853cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingApplyBlock()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingDestroy()`, 854c2e3fba1SPatrick Sanan `ISLocalToGlobalMappingApplyIS()`, `AOCreateBasic()`, `AOApplicationToPetsc()`, 855db781477SPatrick Sanan `AOPetscToApplication()`, `ISGlobalToLocalMappingApply()` 856afcb2eb5SJed Brown @*/ 857d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingApply(ISLocalToGlobalMapping mapping, PetscInt N, const PetscInt in[], PetscInt out[]) 858d71ae5a4SJacob Faibussowitsch { 859cbc1caf0SMatthew G. Knepley PetscInt i, bs, Nmax; 86045b6f7e9SBarry Smith 86145b6f7e9SBarry Smith PetscFunctionBegin; 862cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 863cbc1caf0SMatthew G. Knepley bs = mapping->bs; 864cbc1caf0SMatthew G. Knepley Nmax = bs * mapping->n; 86545b6f7e9SBarry Smith if (bs == 1) { 866cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 86745b6f7e9SBarry Smith for (i = 0; i < N; i++) { 86845b6f7e9SBarry Smith if (in[i] < 0) { 86945b6f7e9SBarry Smith out[i] = in[i]; 87045b6f7e9SBarry Smith continue; 87145b6f7e9SBarry Smith } 87208401ef6SPierre Jolivet PetscCheck(in[i] < Nmax, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Local index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT, in[i], Nmax - 1, i); 87345b6f7e9SBarry Smith out[i] = idx[in[i]]; 87445b6f7e9SBarry Smith } 87545b6f7e9SBarry Smith } else { 876cbc1caf0SMatthew G. Knepley const PetscInt *idx = mapping->indices; 87745b6f7e9SBarry Smith for (i = 0; i < N; i++) { 87845b6f7e9SBarry Smith if (in[i] < 0) { 87945b6f7e9SBarry Smith out[i] = in[i]; 88045b6f7e9SBarry Smith continue; 88145b6f7e9SBarry Smith } 88208401ef6SPierre Jolivet PetscCheck(in[i] < Nmax, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Local index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT, in[i], Nmax - 1, i); 88345b6f7e9SBarry Smith out[i] = idx[in[i] / bs] * bs + (in[i] % bs); 88445b6f7e9SBarry Smith } 88545b6f7e9SBarry Smith } 8863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 88745b6f7e9SBarry Smith } 88845b6f7e9SBarry Smith 88945b6f7e9SBarry Smith /*@ 8906006e8d2SBarry Smith ISLocalToGlobalMappingApplyBlock - Takes a list of integers in a local block numbering and converts them to the global block numbering 89145b6f7e9SBarry Smith 89220662ed9SBarry Smith Not Collective 89345b6f7e9SBarry Smith 89445b6f7e9SBarry Smith Input Parameters: 89545b6f7e9SBarry Smith + mapping - the local to global mapping context 89645b6f7e9SBarry Smith . N - number of integers 8976006e8d2SBarry Smith - in - input indices in local block numbering 89845b6f7e9SBarry Smith 89945b6f7e9SBarry Smith Output Parameter: 9006006e8d2SBarry Smith . out - indices in global block numbering 90145b6f7e9SBarry Smith 9026006e8d2SBarry Smith Example: 903cab54364SBarry Smith If the index values are {0,1,6,7} set with a call to `ISLocalToGlobalMappingCreate`(`PETSC_COMM_SELF`,2,2,{0,3}) then the mapping applied to 0 9046006e8d2SBarry Smith (the first block) would produce 0 and the mapping applied to 1 (the second block) would produce 3. 9056006e8d2SBarry Smith 90620662ed9SBarry Smith Level: advanced 90720662ed9SBarry Smith 90820662ed9SBarry Smith Note: 90920662ed9SBarry Smith The `in` and `out` array parameters may be identical. 91020662ed9SBarry Smith 911cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingDestroy()`, 912c2e3fba1SPatrick Sanan `ISLocalToGlobalMappingApplyIS()`, `AOCreateBasic()`, `AOApplicationToPetsc()`, 913db781477SPatrick Sanan `AOPetscToApplication()`, `ISGlobalToLocalMappingApply()` 91445b6f7e9SBarry Smith @*/ 915d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingApplyBlock(ISLocalToGlobalMapping mapping, PetscInt N, const PetscInt in[], PetscInt out[]) 916d71ae5a4SJacob Faibussowitsch { 9178a1f772fSStefano Zampini PetscInt i, Nmax; 9188a1f772fSStefano Zampini const PetscInt *idx; 919d4bb536fSBarry Smith 920a0d79125SStefano Zampini PetscFunctionBegin; 921a0d79125SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 9228a1f772fSStefano Zampini Nmax = mapping->n; 9238a1f772fSStefano Zampini idx = mapping->indices; 924afcb2eb5SJed Brown for (i = 0; i < N; i++) { 925afcb2eb5SJed Brown if (in[i] < 0) { 926afcb2eb5SJed Brown out[i] = in[i]; 927afcb2eb5SJed Brown continue; 928afcb2eb5SJed Brown } 92908401ef6SPierre Jolivet PetscCheck(in[i] < Nmax, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Local block index %" PetscInt_FMT " too large %" PetscInt_FMT " (max) at %" PetscInt_FMT, in[i], Nmax - 1, i); 930afcb2eb5SJed Brown out[i] = idx[in[i]]; 931afcb2eb5SJed Brown } 9323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 933afcb2eb5SJed Brown } 934d4bb536fSBarry Smith 9357e99dc12SLawrence Mitchell /*@ 936a997ad1aSLois Curfman McInnes ISGlobalToLocalMappingApply - Provides the local numbering for a list of integers 937a997ad1aSLois Curfman McInnes specified with a global numbering. 938d4bb536fSBarry Smith 93920662ed9SBarry Smith Not Collective 940b9cd556bSLois Curfman McInnes 941d4bb536fSBarry Smith Input Parameters: 942b9cd556bSLois Curfman McInnes + mapping - mapping between local and global numbering 943cab54364SBarry Smith . type - `IS_GTOLM_MASK` - maps global indices with no local value to -1 in the output list (i.e., mask them) 944cab54364SBarry Smith `IS_GTOLM_DROP` - drops the indices with no local value from the output list 945d4bb536fSBarry Smith . n - number of global indices to map 946b9cd556bSLois Curfman McInnes - idx - global indices to map 947d4bb536fSBarry Smith 948d4bb536fSBarry Smith Output Parameters: 949cab54364SBarry Smith + nout - number of indices in output array (if type == `IS_GTOLM_MASK` then nout = n) 950b9cd556bSLois Curfman McInnes - idxout - local index of each global index, one must pass in an array long enough 951cab54364SBarry Smith to hold all the indices. You can call `ISGlobalToLocalMappingApply()` with 9520298fd71SBarry Smith idxout == NULL to determine the required length (returned in nout) 953cab54364SBarry Smith and then allocate the required space and call `ISGlobalToLocalMappingApply()` 954e182c471SBarry Smith a second time to set the values. 955d4bb536fSBarry Smith 956cab54364SBarry Smith Level: advanced 957cab54364SBarry Smith 958b9cd556bSLois Curfman McInnes Notes: 95920662ed9SBarry Smith Either `nout` or `idxout` may be `NULL`. `idx` and `idxout` may be identical. 960d4bb536fSBarry Smith 96120662ed9SBarry Smith For "small" problems when using `ISGlobalToLocalMappingApply()` and `ISGlobalToLocalMappingApplyBlock()`, the `ISLocalToGlobalMappingType` of 96220662ed9SBarry Smith `ISLOCALTOGLOBALMAPPINGBASIC` will be used; 963cab54364SBarry Smith this uses more memory but is faster; this approach is not scalable for extremely large mappings. For large problems `ISLOCALTOGLOBALMAPPINGHASH` is used, this is scalable. 964cab54364SBarry Smith Use `ISLocalToGlobalMappingSetType()` or call `ISLocalToGlobalMappingSetFromOptions()` with the option -islocaltoglobalmapping_type <basic,hash> to control which is used. 9650f5bd95cSBarry Smith 96638b5cf2dSJacob Faibussowitsch Developer Notes: 96720662ed9SBarry Smith The manual page states that `idx` and `idxout` may be identical but the calling 96820662ed9SBarry Smith sequence declares `idx` as const so it cannot be the same as `idxout`. 96932fd6b96SBarry Smith 970cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingApply()`, `ISGlobalToLocalMappingApplyBlock()`, `ISLocalToGlobalMappingCreate()`, 971db781477SPatrick Sanan `ISLocalToGlobalMappingDestroy()` 972d4bb536fSBarry Smith @*/ 973d71ae5a4SJacob Faibussowitsch PetscErrorCode ISGlobalToLocalMappingApply(ISLocalToGlobalMapping mapping, ISGlobalToLocalMappingMode type, PetscInt n, const PetscInt idx[], PetscInt *nout, PetscInt idxout[]) 974d71ae5a4SJacob Faibussowitsch { 9759d90f715SBarry Smith PetscFunctionBegin; 9769d90f715SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 97748a46eb9SPierre Jolivet if (!mapping->data) PetscCall(ISGlobalToLocalMappingSetUp(mapping)); 978dbbe0bcdSBarry Smith PetscUseTypeMethod(mapping, globaltolocalmappingapply, type, n, idx, nout, idxout); 9793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9809d90f715SBarry Smith } 9819d90f715SBarry Smith 982d4fe737eSStefano Zampini /*@ 983cab54364SBarry Smith ISGlobalToLocalMappingApplyIS - Creates from an `IS` in the global numbering 984cab54364SBarry Smith a new index set using the local numbering defined in an `ISLocalToGlobalMapping` 985d4fe737eSStefano Zampini context. 986d4fe737eSStefano Zampini 98720662ed9SBarry Smith Not Collective 988d4fe737eSStefano Zampini 989d4fe737eSStefano Zampini Input Parameters: 990d4fe737eSStefano Zampini + mapping - mapping between local and global numbering 991cab54364SBarry Smith . type - `IS_GTOLM_MASK` - maps global indices with no local value to -1 in the output list (i.e., mask them) 992cab54364SBarry Smith `IS_GTOLM_DROP` - drops the indices with no local value from the output list 993d4fe737eSStefano Zampini - is - index set in global numbering 994d4fe737eSStefano Zampini 9952fe279fdSBarry Smith Output Parameter: 996d4fe737eSStefano Zampini . newis - index set in local numbering 997d4fe737eSStefano Zampini 998d4fe737eSStefano Zampini Level: advanced 999d4fe737eSStefano Zampini 1000cab54364SBarry Smith Note: 1001cab54364SBarry Smith The output `IS` will be sequential, as it encodes a purely local operation 1002cab54364SBarry Smith 1003cab54364SBarry Smith .seealso: [](sec_scatter), `ISGlobalToLocalMapping`, `ISGlobalToLocalMappingApply()`, `ISLocalToGlobalMappingCreate()`, 1004db781477SPatrick Sanan `ISLocalToGlobalMappingDestroy()` 1005d4fe737eSStefano Zampini @*/ 1006d71ae5a4SJacob Faibussowitsch PetscErrorCode ISGlobalToLocalMappingApplyIS(ISLocalToGlobalMapping mapping, ISGlobalToLocalMappingMode type, IS is, IS *newis) 1007d71ae5a4SJacob Faibussowitsch { 1008d4fe737eSStefano Zampini PetscInt n, nout, *idxout; 1009d4fe737eSStefano Zampini const PetscInt *idxin; 1010d4fe737eSStefano Zampini 1011d4fe737eSStefano Zampini PetscFunctionBegin; 1012d4fe737eSStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1013d4fe737eSStefano Zampini PetscValidHeaderSpecific(is, IS_CLASSID, 3); 10144f572ea9SToby Isaac PetscAssertPointer(newis, 4); 1015d4fe737eSStefano Zampini 10169566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(is, &n)); 10179566063dSJacob Faibussowitsch PetscCall(ISGetIndices(is, &idxin)); 1018d4fe737eSStefano Zampini if (type == IS_GTOLM_MASK) { 10199566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &idxout)); 1020d4fe737eSStefano Zampini } else { 10219566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingApply(mapping, type, n, idxin, &nout, NULL)); 10229566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nout, &idxout)); 1023d4fe737eSStefano Zampini } 10249566063dSJacob Faibussowitsch PetscCall(ISGlobalToLocalMappingApply(mapping, type, n, idxin, &nout, idxout)); 10259566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(is, &idxin)); 10269566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, nout, idxout, PETSC_OWN_POINTER, newis)); 10273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1028d4fe737eSStefano Zampini } 1029d4fe737eSStefano Zampini 10309d90f715SBarry Smith /*@ 10319d90f715SBarry Smith ISGlobalToLocalMappingApplyBlock - Provides the local block numbering for a list of integers 10329d90f715SBarry Smith specified with a block global numbering. 10339d90f715SBarry Smith 103420662ed9SBarry Smith Not Collective 10359d90f715SBarry Smith 10369d90f715SBarry Smith Input Parameters: 10379d90f715SBarry Smith + mapping - mapping between local and global numbering 1038cab54364SBarry Smith . type - `IS_GTOLM_MASK` - maps global indices with no local value to -1 in the output list (i.e., mask them) 1039cab54364SBarry Smith `IS_GTOLM_DROP` - drops the indices with no local value from the output list 10409d90f715SBarry Smith . n - number of global indices to map 10419d90f715SBarry Smith - idx - global indices to map 10429d90f715SBarry Smith 10439d90f715SBarry Smith Output Parameters: 1044cab54364SBarry Smith + nout - number of indices in output array (if type == `IS_GTOLM_MASK` then nout = n) 10459d90f715SBarry Smith - idxout - local index of each global index, one must pass in an array long enough 1046cab54364SBarry Smith to hold all the indices. You can call `ISGlobalToLocalMappingApplyBlock()` with 10479d90f715SBarry Smith idxout == NULL to determine the required length (returned in nout) 1048cab54364SBarry Smith and then allocate the required space and call `ISGlobalToLocalMappingApplyBlock()` 10499d90f715SBarry Smith a second time to set the values. 10509d90f715SBarry Smith 1051cab54364SBarry Smith Level: advanced 1052cab54364SBarry Smith 10539d90f715SBarry Smith Notes: 105420662ed9SBarry Smith Either `nout` or `idxout` may be `NULL`. `idx` and `idxout` may be identical. 10559d90f715SBarry Smith 105620662ed9SBarry Smith For "small" problems when using `ISGlobalToLocalMappingApply()` and `ISGlobalToLocalMappingApplyBlock()`, the `ISLocalToGlobalMappingType` of 105720662ed9SBarry Smith `ISLOCALTOGLOBALMAPPINGBASIC` will be used; 1058cab54364SBarry Smith this uses more memory but is faster; this approach is not scalable for extremely large mappings. For large problems `ISLOCALTOGLOBALMAPPINGHASH` is used, this is scalable. 1059cab54364SBarry Smith Use `ISLocalToGlobalMappingSetType()` or call `ISLocalToGlobalMappingSetFromOptions()` with the option -islocaltoglobalmapping_type <basic,hash> to control which is used. 10609d90f715SBarry Smith 106138b5cf2dSJacob Faibussowitsch Developer Notes: 106220662ed9SBarry Smith The manual page states that `idx` and `idxout` may be identical but the calling 106320662ed9SBarry Smith sequence declares `idx` as const so it cannot be the same as `idxout`. 10649d90f715SBarry Smith 1065cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingApply()`, `ISGlobalToLocalMappingApply()`, `ISLocalToGlobalMappingCreate()`, 1066db781477SPatrick Sanan `ISLocalToGlobalMappingDestroy()` 10679d90f715SBarry Smith @*/ 1068d71ae5a4SJacob Faibussowitsch PetscErrorCode ISGlobalToLocalMappingApplyBlock(ISLocalToGlobalMapping mapping, ISGlobalToLocalMappingMode type, PetscInt n, const PetscInt idx[], PetscInt *nout, PetscInt idxout[]) 1069d71ae5a4SJacob Faibussowitsch { 10703a40ed3dSBarry Smith PetscFunctionBegin; 10710700a824SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 107248a46eb9SPierre Jolivet if (!mapping->data) PetscCall(ISGlobalToLocalMappingSetUp(mapping)); 1073dbbe0bcdSBarry Smith PetscUseTypeMethod(mapping, globaltolocalmappingapplyblock, type, n, idx, nout, idxout); 10743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1075d4bb536fSBarry Smith } 107690f02eecSBarry Smith 107789d82c54SBarry Smith /*@C 1078633354d9SStefano Zampini ISLocalToGlobalMappingGetBlockInfo - Gets the neighbor information 107989d82c54SBarry Smith 1080633354d9SStefano Zampini Collective the first time it is called 108189d82c54SBarry Smith 1082f899ff85SJose E. Roman Input Parameter: 108389d82c54SBarry Smith . mapping - the mapping from local to global indexing 108489d82c54SBarry Smith 1085d8d19677SJose E. Roman Output Parameters: 1086633354d9SStefano Zampini + nproc - number of processes that are connected to the calling process 1087633354d9SStefano Zampini . procs - neighboring processes 1088633354d9SStefano Zampini . numprocs - number of block indices for each process 1089633354d9SStefano Zampini - indices - block indices (in local numbering) shared with neighbors (sorted by global numbering) 109089d82c54SBarry Smith 109189d82c54SBarry Smith Level: advanced 109289d82c54SBarry Smith 1093cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1094d4df40f3SStefano Zampini `ISLocalToGlobalMappingRestoreBlockInfo()`, `ISLocalToGlobalMappingGetBlockMultiLeavesSF()` 109589d82c54SBarry Smith @*/ 1096d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingGetBlockInfo(ISLocalToGlobalMapping mapping, PetscInt *nproc, PetscInt *procs[], PetscInt *numprocs[], PetscInt **indices[]) 1097d71ae5a4SJacob Faibussowitsch { 1098268a049cSStefano Zampini PetscFunctionBegin; 1099268a049cSStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1100633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingSetUpBlockInfo_Private(mapping)); 1101633354d9SStefano Zampini if (nproc) *nproc = mapping->info_nproc; 1102633354d9SStefano Zampini if (procs) *procs = mapping->info_procs; 1103633354d9SStefano Zampini if (numprocs) *numprocs = mapping->info_numprocs; 1104633354d9SStefano Zampini if (indices) *indices = mapping->info_indices; 11053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1106268a049cSStefano Zampini } 1107268a049cSStefano Zampini 1108633354d9SStefano Zampini /*@C 1109633354d9SStefano Zampini ISLocalToGlobalMappingGetBlockNodeInfo - Gets the neighbor information for each local block index 1110633354d9SStefano Zampini 1111633354d9SStefano Zampini Collective the first time it is called 1112633354d9SStefano Zampini 1113633354d9SStefano Zampini Input Parameter: 1114633354d9SStefano Zampini . mapping - the mapping from local to global indexing 1115633354d9SStefano Zampini 11169cde84edSJose E. Roman Output Parameters: 1117633354d9SStefano Zampini + n - number of local block nodes 1118633354d9SStefano Zampini . n_procs - an array storing the number of processes for each local block node (including self) 1119633354d9SStefano Zampini - procs - the processes' rank for each local block node (sorted, self is first) 1120633354d9SStefano Zampini 1121633354d9SStefano Zampini Level: advanced 1122633354d9SStefano Zampini 1123633354d9SStefano Zampini Notes: 1124633354d9SStefano Zampini The user needs to call `ISLocalToGlobalMappingRestoreBlockNodeInfo()` when the data is no longer needed. 1125633354d9SStefano Zampini The information returned by this function complements that of `ISLocalToGlobalMappingGetBlockInfo()`. 1126633354d9SStefano Zampini The latter only provides local information, and the neighboring information 1127633354d9SStefano Zampini cannot be inferred in the general case, unless the mapping is locally one-to-one on each process. 1128633354d9SStefano Zampini 1129633354d9SStefano Zampini .seealso: `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1130633354d9SStefano Zampini `ISLocalToGlobalMappingGetBlockInfo()`, `ISLocalToGlobalMappingRestoreBlockNodeInfo()`, `ISLocalToGlobalMappingGetNodeInfo()` 1131633354d9SStefano Zampini @*/ 1132633354d9SStefano Zampini PetscErrorCode ISLocalToGlobalMappingGetBlockNodeInfo(ISLocalToGlobalMapping mapping, PetscInt *n, PetscInt *n_procs[], PetscInt **procs[]) 1133d71ae5a4SJacob Faibussowitsch { 1134633354d9SStefano Zampini PetscFunctionBegin; 1135633354d9SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1136633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingSetUpBlockInfo_Private(mapping)); 1137633354d9SStefano Zampini if (n) *n = mapping->n; 1138633354d9SStefano Zampini if (n_procs) *n_procs = mapping->info_nodec; 1139633354d9SStefano Zampini if (procs) *procs = mapping->info_nodei; 1140633354d9SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 1141633354d9SStefano Zampini } 1142633354d9SStefano Zampini 1143633354d9SStefano Zampini /*@C 1144633354d9SStefano Zampini ISLocalToGlobalMappingRestoreBlockNodeInfo - Frees the memory allocated by `ISLocalToGlobalMappingGetBlockNodeInfo()` 1145633354d9SStefano Zampini 1146633354d9SStefano Zampini Not Collective 1147633354d9SStefano Zampini 1148633354d9SStefano Zampini Input Parameters: 1149633354d9SStefano Zampini + mapping - the mapping from local to global indexing 1150633354d9SStefano Zampini . n - number of local block nodes 1151633354d9SStefano Zampini . n_procs - an array storing the number of processes for each local block nodes (including self) 1152633354d9SStefano Zampini - procs - the processes' rank for each local block node (sorted, self is first) 1153633354d9SStefano Zampini 1154633354d9SStefano Zampini Level: advanced 1155633354d9SStefano Zampini 1156633354d9SStefano Zampini .seealso: `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1157633354d9SStefano Zampini `ISLocalToGlobalMappingGetBlockNodeInfo()` 1158633354d9SStefano Zampini @*/ 1159633354d9SStefano Zampini PetscErrorCode ISLocalToGlobalMappingRestoreBlockNodeInfo(ISLocalToGlobalMapping mapping, PetscInt *n, PetscInt *n_procs[], PetscInt **procs[]) 1160633354d9SStefano Zampini { 1161633354d9SStefano Zampini PetscFunctionBegin; 1162633354d9SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1163633354d9SStefano Zampini if (n) *n = 0; 1164633354d9SStefano Zampini if (n_procs) *n_procs = NULL; 1165633354d9SStefano Zampini if (procs) *procs = NULL; 1166633354d9SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 1167633354d9SStefano Zampini } 1168633354d9SStefano Zampini 1169d4df40f3SStefano Zampini /*@C 1170d4df40f3SStefano Zampini ISLocalToGlobalMappingGetBlockMultiLeavesSF - Get the star-forest to communicate multi-leaf block data 1171d4df40f3SStefano Zampini 1172d4df40f3SStefano Zampini Collective the first time it is called 1173d4df40f3SStefano Zampini 1174d4df40f3SStefano Zampini Input Parameter: 1175d4df40f3SStefano Zampini . mapping - the mapping from local to global indexing 1176d4df40f3SStefano Zampini 1177d4df40f3SStefano Zampini Output Parameter: 1178d4df40f3SStefano Zampini . mlsf - the `PetscSF` 1179d4df40f3SStefano Zampini 1180d4df40f3SStefano Zampini Level: advanced 1181d4df40f3SStefano Zampini 1182d4df40f3SStefano Zampini Notes: 1183d4df40f3SStefano Zampini The returned star forest is suitable to exchange local information with other processes sharing the same global block index. 1184d4df40f3SStefano Zampini For example, suppose a mapping with two processes has been created with 1185d4df40f3SStefano Zampini .vb 1186d4df40f3SStefano Zampini rank 0 global block indices: [0, 1, 2] 1187d4df40f3SStefano Zampini rank 1 global block indices: [2, 3, 4] 1188d4df40f3SStefano Zampini .ve 1189d4df40f3SStefano Zampini and we want to share the local information 1190d4df40f3SStefano Zampini .vb 1191d4df40f3SStefano Zampini rank 0 data: [-1, -2, -3] 1192d4df40f3SStefano Zampini rank 1 data: [1, 2, 3] 1193d4df40f3SStefano Zampini .ve 1194d4df40f3SStefano Zampini then, the broadcasting action of `mlsf` will allow to collect 1195d4df40f3SStefano Zampini .vb 1196d4df40f3SStefano Zampini rank 0 mlleafdata: [-1, -2, -3, 3] 1197d4df40f3SStefano Zampini rank 1 mlleafdata: [-3, 3, 1, 2] 1198d4df40f3SStefano Zampini .ve 1199d4df40f3SStefano Zampini Use ``ISLocalToGlobalMappingGetBlockNodeInfo()`` to index into the multi-leaf data. 1200d4df40f3SStefano Zampini 1201d4df40f3SStefano Zampini .seealso: [](sec_scatter), `ISLocalToGlobalMappingGetBlockNodeInfo()`, `PetscSF` 1202d4df40f3SStefano Zampini @*/ 1203d4df40f3SStefano Zampini PetscErrorCode ISLocalToGlobalMappingGetBlockMultiLeavesSF(ISLocalToGlobalMapping mapping, PetscSF *mlsf) 1204d4df40f3SStefano Zampini { 1205d4df40f3SStefano Zampini PetscFunctionBegin; 1206d4df40f3SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1207d4df40f3SStefano Zampini PetscAssertPointer(mlsf, 2); 1208d4df40f3SStefano Zampini PetscCall(ISLocalToGlobalMappingSetUpBlockInfo_Private(mapping)); 1209d4df40f3SStefano Zampini *mlsf = mapping->multileaves_sf; 1210d4df40f3SStefano Zampini PetscFunctionReturn(PETSC_SUCCESS); 1211d4df40f3SStefano Zampini } 1212d4df40f3SStefano Zampini 1213633354d9SStefano Zampini static PetscErrorCode ISLocalToGlobalMappingSetUpBlockInfo_Private(ISLocalToGlobalMapping mapping) 1214633354d9SStefano Zampini { 1215d4df40f3SStefano Zampini PetscSF sf, sf2, imsf, msf; 1216ce94432eSBarry Smith MPI_Comm comm; 1217633354d9SStefano Zampini const PetscSFNode *sfnode; 1218633354d9SStefano Zampini PetscSFNode *newsfnode; 1219633354d9SStefano Zampini PetscLayout layout; 1220633354d9SStefano Zampini PetscHMapI neighs; 1221633354d9SStefano Zampini PetscHashIter iter; 1222633354d9SStefano Zampini PetscBool missing; 1223633354d9SStefano Zampini const PetscInt *gidxs, *rootdegree; 1224633354d9SStefano Zampini PetscInt *mask, *mrootdata, *leafdata, *newleafdata, *leafrd, *tmpg; 1225633354d9SStefano Zampini PetscInt nroots, nleaves, newnleaves, bs, i, j, m, mnroots, p; 1226633354d9SStefano Zampini PetscMPIInt rank, size; 122789d82c54SBarry Smith 122889d82c54SBarry Smith PetscFunctionBegin; 1229d4df40f3SStefano Zampini if (mapping->multileaves_sf) PetscFunctionReturn(PETSC_SUCCESS); 12309566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)mapping, &comm)); 12319566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 12329566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 1233633354d9SStefano Zampini 1234633354d9SStefano Zampini /* Get mapping indices */ 1235633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingGetBlockSize(mapping, &bs)); 1236633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingGetBlockIndices(mapping, &gidxs)); 1237633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingGetSize(mapping, &nleaves)); 1238633354d9SStefano Zampini nleaves /= bs; 1239633354d9SStefano Zampini 1240633354d9SStefano Zampini /* Create layout for global indices */ 1241633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) m = PetscMax(m, gidxs[i]); 1242633354d9SStefano Zampini PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &m, 1, MPIU_INT, MPI_MAX, comm)); 1243633354d9SStefano Zampini PetscCall(PetscLayoutCreate(comm, &layout)); 1244633354d9SStefano Zampini PetscCall(PetscLayoutSetSize(layout, m + 1)); 1245633354d9SStefano Zampini PetscCall(PetscLayoutSetUp(layout)); 1246633354d9SStefano Zampini 1247633354d9SStefano Zampini /* Create SF to share global indices */ 1248633354d9SStefano Zampini PetscCall(PetscSFCreate(comm, &sf)); 1249633354d9SStefano Zampini PetscCall(PetscSFSetGraphLayout(sf, layout, nleaves, NULL, PETSC_OWN_POINTER, gidxs)); 1250633354d9SStefano Zampini PetscCall(PetscSFSetUp(sf)); 1251633354d9SStefano Zampini PetscCall(PetscLayoutDestroy(&layout)); 1252633354d9SStefano Zampini 1253633354d9SStefano Zampini /* communicate root degree to leaves */ 1254633354d9SStefano Zampini PetscCall(PetscSFGetGraph(sf, &nroots, NULL, NULL, &sfnode)); 1255633354d9SStefano Zampini PetscCall(PetscSFComputeDegreeBegin(sf, &rootdegree)); 1256633354d9SStefano Zampini PetscCall(PetscSFComputeDegreeEnd(sf, &rootdegree)); 1257633354d9SStefano Zampini for (i = 0, mnroots = 0; i < nroots; i++) mnroots += rootdegree[i]; 1258633354d9SStefano Zampini PetscCall(PetscMalloc3(2 * PetscMax(mnroots, nroots), &mrootdata, 2 * nleaves, &leafdata, nleaves, &leafrd)); 1259633354d9SStefano Zampini for (i = 0, m = 0; i < nroots; i++) { 1260633354d9SStefano Zampini mrootdata[2 * i + 0] = rootdegree[i]; 1261633354d9SStefano Zampini mrootdata[2 * i + 1] = m; 1262633354d9SStefano Zampini m += rootdegree[i]; 1263633354d9SStefano Zampini } 1264633354d9SStefano Zampini PetscCall(PetscSFBcastBegin(sf, MPIU_2INT, mrootdata, leafdata, MPI_REPLACE)); 1265633354d9SStefano Zampini PetscCall(PetscSFBcastEnd(sf, MPIU_2INT, mrootdata, leafdata, MPI_REPLACE)); 1266633354d9SStefano Zampini 1267633354d9SStefano Zampini /* allocate enough space to store ranks */ 1268633354d9SStefano Zampini for (i = 0, newnleaves = 0; i < nleaves; i++) { 1269633354d9SStefano Zampini newnleaves += leafdata[2 * i]; 1270633354d9SStefano Zampini leafrd[i] = leafdata[2 * i]; 127124cf384cSBarry Smith } 127224cf384cSBarry Smith 1273633354d9SStefano Zampini /* create new SF nodes to collect multi-root data at leaves */ 1274633354d9SStefano Zampini PetscCall(PetscMalloc1(newnleaves, &newsfnode)); 1275633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) { 1276633354d9SStefano Zampini for (j = 0; j < leafrd[i]; j++) { 1277633354d9SStefano Zampini newsfnode[m].rank = sfnode[i].rank; 1278633354d9SStefano Zampini newsfnode[m].index = leafdata[2 * i + 1] + j; 1279633354d9SStefano Zampini m++; 1280bc8ff85bSBarry Smith } 1281bc8ff85bSBarry Smith } 1282bc8ff85bSBarry Smith 1283633354d9SStefano Zampini /* gather ranks at multi roots */ 1284633354d9SStefano Zampini for (i = 0; i < mnroots; i++) mrootdata[i] = -1; 1285633354d9SStefano Zampini for (i = 0; i < nleaves; i++) leafdata[i] = (PetscInt)rank; 128630dcb7c9SBarry Smith 1287633354d9SStefano Zampini PetscCall(PetscSFGatherBegin(sf, MPIU_INT, leafdata, mrootdata)); 1288633354d9SStefano Zampini PetscCall(PetscSFGatherEnd(sf, MPIU_INT, leafdata, mrootdata)); 12893677ff5aSBarry Smith 1290d4df40f3SStefano Zampini /* from multi-roots to multi-leaves */ 1291d4df40f3SStefano Zampini PetscCall(PetscSFCreate(comm, &sf2)); 1292d4df40f3SStefano Zampini PetscCall(PetscSFSetGraph(sf2, mnroots, newnleaves, NULL, PETSC_OWN_POINTER, newsfnode, PETSC_OWN_POINTER)); 1293d4df40f3SStefano Zampini PetscCall(PetscSFSetUp(sf2)); 1294f6e5521dSKarl Rupp 1295633354d9SStefano Zampini /* broadcast multi-root data to multi-leaves */ 1296633354d9SStefano Zampini PetscCall(PetscMalloc1(newnleaves, &newleafdata)); 1297d4df40f3SStefano Zampini PetscCall(PetscSFBcastBegin(sf2, MPIU_INT, mrootdata, newleafdata, MPI_REPLACE)); 1298d4df40f3SStefano Zampini PetscCall(PetscSFBcastEnd(sf2, MPIU_INT, mrootdata, newleafdata, MPI_REPLACE)); 1299f6e5521dSKarl Rupp 1300633354d9SStefano Zampini /* sort sharing ranks */ 1301633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) { 1302633354d9SStefano Zampini PetscCall(PetscSortInt(leafrd[i], newleafdata + m)); 1303633354d9SStefano Zampini m += leafrd[i]; 130430dcb7c9SBarry Smith } 130530dcb7c9SBarry Smith 1306633354d9SStefano Zampini /* Number of neighbors and their ranks */ 1307633354d9SStefano Zampini PetscCall(PetscHMapICreate(&neighs)); 1308633354d9SStefano Zampini for (i = 0; i < newnleaves; i++) PetscCall(PetscHMapIPut(neighs, newleafdata[i], &iter, &missing)); 1309633354d9SStefano Zampini PetscCall(PetscHMapIGetSize(neighs, &mapping->info_nproc)); 1310633354d9SStefano Zampini PetscCall(PetscMalloc1(mapping->info_nproc + 1, &mapping->info_procs)); 1311633354d9SStefano Zampini PetscCall(PetscHMapIGetKeys(neighs, (i = 0, &i), mapping->info_procs)); 1312633354d9SStefano Zampini for (i = 0; i < mapping->info_nproc; i++) { /* put info for self first */ 1313633354d9SStefano Zampini if (mapping->info_procs[i] == rank) { 1314633354d9SStefano Zampini PetscInt newr = mapping->info_procs[0]; 1315d44834fbSBarry Smith 1316633354d9SStefano Zampini mapping->info_procs[0] = rank; 1317633354d9SStefano Zampini mapping->info_procs[i] = newr; 131824cf384cSBarry Smith break; 131924cf384cSBarry Smith } 132024cf384cSBarry Smith } 1321633354d9SStefano Zampini if (mapping->info_nproc) PetscCall(PetscSortInt(mapping->info_nproc - 1, mapping->info_procs + 1)); 1322633354d9SStefano Zampini PetscCall(PetscHMapIDestroy(&neighs)); 1323268a049cSStefano Zampini 1324633354d9SStefano Zampini /* collect info data */ 1325d4df40f3SStefano Zampini PetscCall(PetscMalloc1(mapping->info_nproc, &mapping->info_numprocs)); 1326d4df40f3SStefano Zampini PetscCall(PetscMalloc1(mapping->info_nproc, &mapping->info_indices)); 1327d4df40f3SStefano Zampini for (i = 0; i < mapping->info_nproc; i++) mapping->info_indices[i] = NULL; 1328633354d9SStefano Zampini 1329633354d9SStefano Zampini PetscCall(PetscMalloc1(nleaves, &mask)); 1330633354d9SStefano Zampini PetscCall(PetscMalloc1(nleaves, &tmpg)); 1331633354d9SStefano Zampini for (p = 0; p < mapping->info_nproc; p++) { 1332633354d9SStefano Zampini PetscInt *tmp, trank = mapping->info_procs[p]; 1333633354d9SStefano Zampini 1334633354d9SStefano Zampini PetscCall(PetscMemzero(mask, nleaves * sizeof(*mask))); 1335633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) { 1336633354d9SStefano Zampini for (j = 0; j < leafrd[i]; j++) { 1337633354d9SStefano Zampini if (newleafdata[m] == trank) mask[i]++; 1338633354d9SStefano Zampini if (!p && newleafdata[m] != rank) mask[i]++; 1339633354d9SStefano Zampini m++; 1340633354d9SStefano Zampini } 1341633354d9SStefano Zampini } 1342633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) 1343633354d9SStefano Zampini if (mask[i] > (!p ? 1 : 0)) m++; 1344633354d9SStefano Zampini 1345633354d9SStefano Zampini PetscCall(PetscMalloc1(m, &tmp)); 1346633354d9SStefano Zampini for (i = 0, m = 0; i < nleaves; i++) 1347633354d9SStefano Zampini if (mask[i] > (!p ? 1 : 0)) { 1348633354d9SStefano Zampini tmp[m] = i; 1349633354d9SStefano Zampini tmpg[m] = gidxs[i]; 1350633354d9SStefano Zampini m++; 1351633354d9SStefano Zampini } 1352633354d9SStefano Zampini PetscCall(PetscSortIntWithArray(m, tmpg, tmp)); 1353633354d9SStefano Zampini mapping->info_indices[p] = tmp; 1354633354d9SStefano Zampini mapping->info_numprocs[p] = m; 1355633354d9SStefano Zampini } 1356633354d9SStefano Zampini 1357633354d9SStefano Zampini /* Node info */ 1358633354d9SStefano Zampini PetscCall(PetscMalloc2(nleaves, &mapping->info_nodec, nleaves + 1, &mapping->info_nodei)); 1359633354d9SStefano Zampini PetscCall(PetscArraycpy(mapping->info_nodec, leafrd, nleaves)); 1360633354d9SStefano Zampini PetscCall(PetscMalloc1(newnleaves, &mapping->info_nodei[0])); 1361633354d9SStefano Zampini for (i = 0; i < nleaves - 1; i++) mapping->info_nodei[i + 1] = mapping->info_nodei[i] + mapping->info_nodec[i]; 1362633354d9SStefano Zampini PetscCall(PetscArraycpy(mapping->info_nodei[0], newleafdata, newnleaves)); 1363633354d9SStefano Zampini 1364d4df40f3SStefano Zampini /* Create SF from leaves to multi-leaves */ 1365d4df40f3SStefano Zampini PetscCall(PetscSFGetMultiSF(sf, &msf)); 1366d4df40f3SStefano Zampini PetscCall(PetscSFCreateInverseSF(msf, &imsf)); 1367d4df40f3SStefano Zampini PetscCall(PetscSFCompose(imsf, sf2, &mapping->multileaves_sf)); 1368d4df40f3SStefano Zampini PetscCall(PetscSFDestroy(&imsf)); 1369d4df40f3SStefano Zampini PetscCall(PetscSFDestroy(&sf)); 1370d4df40f3SStefano Zampini PetscCall(PetscSFDestroy(&sf2)); 1371d4df40f3SStefano Zampini 1372633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingRestoreBlockIndices(mapping, &gidxs)); 1373633354d9SStefano Zampini PetscCall(PetscFree(tmpg)); 1374633354d9SStefano Zampini PetscCall(PetscFree(mask)); 1375633354d9SStefano Zampini PetscCall(PetscFree3(mrootdata, leafdata, leafrd)); 1376633354d9SStefano Zampini PetscCall(PetscFree(newleafdata)); 13773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 137889d82c54SBarry Smith } 137989d82c54SBarry Smith 13806a818285SBarry Smith /*@C 1381cab54364SBarry Smith ISLocalToGlobalMappingRestoreBlockInfo - Frees the memory allocated by `ISLocalToGlobalMappingGetBlockInfo()` 13826a818285SBarry Smith 1383633354d9SStefano Zampini Not Collective 13846a818285SBarry Smith 1385633354d9SStefano Zampini Input Parameters: 1386633354d9SStefano Zampini + mapping - the mapping from local to global indexing 1387633354d9SStefano Zampini . nproc - number of processes that are connected to the calling process 1388633354d9SStefano Zampini . procs - neighboring processes 1389633354d9SStefano Zampini . numprocs - number of block indices for each process 1390633354d9SStefano Zampini - indices - block indices (in local numbering) shared with neighbors (sorted by global numbering) 13916a818285SBarry Smith 13926a818285SBarry Smith Level: advanced 13936a818285SBarry Smith 1394cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1395db781477SPatrick Sanan `ISLocalToGlobalMappingGetInfo()` 13966a818285SBarry Smith @*/ 1397d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingRestoreBlockInfo(ISLocalToGlobalMapping mapping, PetscInt *nproc, PetscInt *procs[], PetscInt *numprocs[], PetscInt **indices[]) 1398d71ae5a4SJacob Faibussowitsch { 13996a818285SBarry Smith PetscFunctionBegin; 1400cbc1caf0SMatthew G. Knepley PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1401633354d9SStefano Zampini if (nproc) *nproc = 0; 1402633354d9SStefano Zampini if (procs) *procs = NULL; 1403633354d9SStefano Zampini if (numprocs) *numprocs = NULL; 1404633354d9SStefano Zampini if (indices) *indices = NULL; 14053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14066a818285SBarry Smith } 14076a818285SBarry Smith 14086a818285SBarry Smith /*@C 1409633354d9SStefano Zampini ISLocalToGlobalMappingGetInfo - Gets the neighbor information for each process 14106a818285SBarry Smith 1411633354d9SStefano Zampini Collective the first time it is called 14126a818285SBarry Smith 1413f899ff85SJose E. Roman Input Parameter: 14146a818285SBarry Smith . mapping - the mapping from local to global indexing 14156a818285SBarry Smith 1416d8d19677SJose E. Roman Output Parameters: 1417633354d9SStefano Zampini + nproc - number of processes that are connected to the calling process 1418633354d9SStefano Zampini . procs - neighboring processes 1419633354d9SStefano Zampini . numprocs - number of indices for each process 1420633354d9SStefano Zampini - indices - indices (in local numbering) shared with neighbors (sorted by global numbering) 14216a818285SBarry Smith 14226a818285SBarry Smith Level: advanced 14236a818285SBarry Smith 1424cab54364SBarry Smith Note: 1425cab54364SBarry Smith The user needs to call `ISLocalToGlobalMappingRestoreInfo()` when the data is no longer needed. 14261bd0b88eSStefano Zampini 142738b5cf2dSJacob Faibussowitsch Fortran Notes: 1428e33f79d8SJacob Faibussowitsch There is no `ISLocalToGlobalMappingRestoreInfo()` in Fortran. You must make sure that 1429e33f79d8SJacob Faibussowitsch `procs`[], `numprocs`[] and `indices`[][] are large enough arrays, either by allocating them 1430e33f79d8SJacob Faibussowitsch dynamically or defining static ones large enough. 1431e33f79d8SJacob Faibussowitsch 1432cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1433633354d9SStefano Zampini `ISLocalToGlobalMappingRestoreInfo()`, `ISLocalToGlobalMappingGetNodeInfo()` 14346a818285SBarry Smith @*/ 1435d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingGetInfo(ISLocalToGlobalMapping mapping, PetscInt *nproc, PetscInt *procs[], PetscInt *numprocs[], PetscInt **indices[]) 1436d71ae5a4SJacob Faibussowitsch { 1437633354d9SStefano Zampini PetscInt **bindices = NULL, *bnumprocs = NULL, bs, i, j, k, n, *bprocs; 14386a818285SBarry Smith 14396a818285SBarry Smith PetscFunctionBegin; 14406a818285SBarry Smith PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 14418a1f772fSStefano Zampini bs = mapping->bs; 1442633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingGetBlockInfo(mapping, &n, &bprocs, &bnumprocs, &bindices)); 1443268a049cSStefano Zampini if (bs > 1) { /* we need to expand the cached info */ 1444633354d9SStefano Zampini if (indices) PetscCall(PetscCalloc1(n, indices)); 1445633354d9SStefano Zampini if (numprocs) PetscCall(PetscCalloc1(n, numprocs)); 1446633354d9SStefano Zampini if (indices || numprocs) { 1447633354d9SStefano Zampini for (i = 0; i < n; i++) { 1448633354d9SStefano Zampini if (indices) { 14499566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(bs * bnumprocs[i], &(*indices)[i])); 1450268a049cSStefano Zampini for (j = 0; j < bnumprocs[i]; j++) { 1451ad540459SPierre Jolivet for (k = 0; k < bs; k++) (*indices)[i][j * bs + k] = bs * bindices[i][j] + k; 14526a818285SBarry Smith } 14536a818285SBarry Smith } 1454633354d9SStefano Zampini if (numprocs) (*numprocs)[i] = bnumprocs[i] * bs; 1455633354d9SStefano Zampini } 1456633354d9SStefano Zampini } 1457268a049cSStefano Zampini } else { 1458633354d9SStefano Zampini if (numprocs) *numprocs = bnumprocs; 1459633354d9SStefano Zampini if (indices) *indices = bindices; 14606a818285SBarry Smith } 1461633354d9SStefano Zampini if (nproc) *nproc = n; 1462633354d9SStefano Zampini if (procs) *procs = bprocs; 14633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14646a818285SBarry Smith } 14656a818285SBarry Smith 146607b52d57SBarry Smith /*@C 1467cab54364SBarry Smith ISLocalToGlobalMappingRestoreInfo - Frees the memory allocated by `ISLocalToGlobalMappingGetInfo()` 146889d82c54SBarry Smith 1469633354d9SStefano Zampini Not Collective 147007b52d57SBarry Smith 1471633354d9SStefano Zampini Input Parameters: 1472633354d9SStefano Zampini + mapping - the mapping from local to global indexing 1473633354d9SStefano Zampini . nproc - number of processes that are connected to the calling process 1474633354d9SStefano Zampini . procs - neighboring processes 1475633354d9SStefano Zampini . numprocs - number of indices for each process 1476633354d9SStefano Zampini - indices - indices (in local numbering) shared with neighbors (sorted by global numbering) 147707b52d57SBarry Smith 147807b52d57SBarry Smith Level: advanced 147907b52d57SBarry Smith 1480cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1481db781477SPatrick Sanan `ISLocalToGlobalMappingGetInfo()` 148207b52d57SBarry Smith @*/ 1483d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingRestoreInfo(ISLocalToGlobalMapping mapping, PetscInt *nproc, PetscInt *procs[], PetscInt *numprocs[], PetscInt **indices[]) 1484d71ae5a4SJacob Faibussowitsch { 148507b52d57SBarry Smith PetscFunctionBegin; 1486633354d9SStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1487633354d9SStefano Zampini if (mapping->bs > 1) { 1488633354d9SStefano Zampini if (numprocs) PetscCall(PetscFree(*numprocs)); 1489633354d9SStefano Zampini if (indices) { 1490633354d9SStefano Zampini if (*indices) 1491633354d9SStefano Zampini for (PetscInt i = 0; i < *nproc; i++) PetscCall(PetscFree((*indices)[i])); 1492633354d9SStefano Zampini PetscCall(PetscFree(*indices)); 1493633354d9SStefano Zampini } 1494633354d9SStefano Zampini } 14953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 149607b52d57SBarry Smith } 149786994e45SJed Brown 149886994e45SJed Brown /*@C 1499633354d9SStefano Zampini ISLocalToGlobalMappingGetNodeInfo - Gets the neighbor information of local nodes 15001bd0b88eSStefano Zampini 1501633354d9SStefano Zampini Collective the first time it is called 15021bd0b88eSStefano Zampini 1503f899ff85SJose E. Roman Input Parameter: 15041bd0b88eSStefano Zampini . mapping - the mapping from local to global indexing 15051bd0b88eSStefano Zampini 1506d8d19677SJose E. Roman Output Parameters: 1507633354d9SStefano Zampini + n - number of local nodes 1508633354d9SStefano Zampini . n_procs - an array storing the number of processes for each local node (including self) 1509633354d9SStefano Zampini - procs - the processes' rank for each local node (sorted, self is first) 15101bd0b88eSStefano Zampini 15111bd0b88eSStefano Zampini Level: advanced 15121bd0b88eSStefano Zampini 1513cab54364SBarry Smith Note: 1514633354d9SStefano Zampini The user needs to call `ISLocalToGlobalMappingRestoreNodeInfo()` when the data is no longer needed. 15151bd0b88eSStefano Zampini 1516cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1517633354d9SStefano Zampini `ISLocalToGlobalMappingGetInfo()`, `ISLocalToGlobalMappingRestoreNodeInfo()`, `ISLocalToGlobalMappingGetBlockNodeInfo()` 15181bd0b88eSStefano Zampini @*/ 1519633354d9SStefano Zampini PetscErrorCode ISLocalToGlobalMappingGetNodeInfo(ISLocalToGlobalMapping mapping, PetscInt *n, PetscInt *n_procs[], PetscInt **procs[]) 1520d71ae5a4SJacob Faibussowitsch { 1521633354d9SStefano Zampini PetscInt **bprocs = NULL, *bn_procs = NULL, bs, i, j, k, bn; 15221bd0b88eSStefano Zampini 15231bd0b88eSStefano Zampini PetscFunctionBegin; 15241bd0b88eSStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1525633354d9SStefano Zampini bs = mapping->bs; 1526633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingGetBlockNodeInfo(mapping, &bn, &bn_procs, &bprocs)); 1527633354d9SStefano Zampini if (bs > 1) { /* we need to expand the cached info */ 1528633354d9SStefano Zampini PetscInt *tn_procs; 1529633354d9SStefano Zampini PetscInt c; 15301bd0b88eSStefano Zampini 1531633354d9SStefano Zampini PetscCall(PetscMalloc1(bn * bs, &tn_procs)); 1532633354d9SStefano Zampini for (i = 0, c = 0; i < bn; i++) { 1533633354d9SStefano Zampini for (k = 0; k < bs; k++) tn_procs[i * bs + k] = bn_procs[i]; 1534633354d9SStefano Zampini c += bs * bn_procs[i]; 1535633354d9SStefano Zampini } 1536633354d9SStefano Zampini if (n) *n = bn * bs; 1537633354d9SStefano Zampini if (procs) { 1538633354d9SStefano Zampini PetscInt **tprocs; 1539633354d9SStefano Zampini PetscInt tn = bn * bs; 15401bd0b88eSStefano Zampini 1541633354d9SStefano Zampini PetscCall(PetscMalloc1(tn, &tprocs)); 1542633354d9SStefano Zampini if (tn) PetscCall(PetscMalloc1(c, &tprocs[0])); 1543633354d9SStefano Zampini for (i = 0; i < tn - 1; i++) tprocs[i + 1] = tprocs[i] + tn_procs[i]; 1544633354d9SStefano Zampini for (i = 0; i < bn; i++) { 1545633354d9SStefano Zampini for (k = 0; k < bs; k++) { 1546633354d9SStefano Zampini for (j = 0; j < bn_procs[i]; j++) tprocs[i * bs + k][j] = bprocs[i][j]; 15471bd0b88eSStefano Zampini } 15481bd0b88eSStefano Zampini } 1549633354d9SStefano Zampini *procs = tprocs; 15501bd0b88eSStefano Zampini } 1551633354d9SStefano Zampini if (n_procs) *n_procs = tn_procs; 1552633354d9SStefano Zampini else PetscCall(PetscFree(tn_procs)); 1553633354d9SStefano Zampini } else { 1554633354d9SStefano Zampini if (n) *n = bn; 1555633354d9SStefano Zampini if (n_procs) *n_procs = bn_procs; 1556633354d9SStefano Zampini if (procs) *procs = bprocs; 1557633354d9SStefano Zampini } 15583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15591bd0b88eSStefano Zampini } 15601bd0b88eSStefano Zampini 15611bd0b88eSStefano Zampini /*@C 1562cab54364SBarry Smith ISLocalToGlobalMappingRestoreNodeInfo - Frees the memory allocated by `ISLocalToGlobalMappingGetNodeInfo()` 15631bd0b88eSStefano Zampini 1564633354d9SStefano Zampini Not Collective 15651bd0b88eSStefano Zampini 1566633354d9SStefano Zampini Input Parameters: 1567633354d9SStefano Zampini + mapping - the mapping from local to global indexing 1568633354d9SStefano Zampini . n - number of local nodes 1569633354d9SStefano Zampini . n_procs - an array storing the number of processes for each local node (including self) 1570633354d9SStefano Zampini - procs - the processes' rank for each local node (sorted, self is first) 15711bd0b88eSStefano Zampini 15721bd0b88eSStefano Zampini Level: advanced 15731bd0b88eSStefano Zampini 1574cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingDestroy()`, `ISLocalToGlobalMappingCreateIS()`, `ISLocalToGlobalMappingCreate()`, 1575db781477SPatrick Sanan `ISLocalToGlobalMappingGetInfo()` 15761bd0b88eSStefano Zampini @*/ 1577633354d9SStefano Zampini PetscErrorCode ISLocalToGlobalMappingRestoreNodeInfo(ISLocalToGlobalMapping mapping, PetscInt *n, PetscInt *n_procs[], PetscInt **procs[]) 1578d71ae5a4SJacob Faibussowitsch { 15791bd0b88eSStefano Zampini PetscFunctionBegin; 15801bd0b88eSStefano Zampini PetscValidHeaderSpecific(mapping, IS_LTOGM_CLASSID, 1); 1581633354d9SStefano Zampini if (mapping->bs > 1) { 1582633354d9SStefano Zampini if (n_procs) PetscCall(PetscFree(*n_procs)); 1583633354d9SStefano Zampini if (procs) { 1584633354d9SStefano Zampini if (*procs) PetscCall(PetscFree((*procs)[0])); 1585633354d9SStefano Zampini PetscCall(PetscFree(*procs)); 1586633354d9SStefano Zampini } 1587633354d9SStefano Zampini } 1588633354d9SStefano Zampini PetscCall(ISLocalToGlobalMappingRestoreBlockNodeInfo(mapping, n, n_procs, procs)); 15893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15901bd0b88eSStefano Zampini } 15911bd0b88eSStefano Zampini 15926ce40d10SBarry Smith /*MC 15936ce40d10SBarry Smith ISLocalToGlobalMappingGetIndicesF90 - Get global indices for every local point that is mapped 15946ce40d10SBarry Smith 15956ce40d10SBarry Smith Synopsis: 15966ce40d10SBarry Smith ISLocalToGlobalMappingGetIndicesF90(ISLocalToGlobalMapping ltog, PetscInt, pointer :: array(:)}, integer ierr) 15976ce40d10SBarry Smith 15986ce40d10SBarry Smith Not Collective 15996ce40d10SBarry Smith 16006ce40d10SBarry Smith Input Parameter: 16016ce40d10SBarry Smith . A - the matrix 16026ce40d10SBarry Smith 16032fe279fdSBarry Smith Output Parameter: 16046ce40d10SBarry Smith . array - array of indices, the length of this array may be obtained with `ISLocalToGlobalMappingGetSize()` 16056ce40d10SBarry Smith 16066ce40d10SBarry Smith Level: advanced 16076ce40d10SBarry Smith 16086ce40d10SBarry Smith Note: 16096ce40d10SBarry Smith Use `ISLocalToGlobalMappingGetIndicesF90()` when you no longer need access to the data 16106ce40d10SBarry Smith 161120662ed9SBarry Smith .seealso: [](sec_fortranarrays), [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingGetIndices()`, `ISLocalToGlobalMappingRestoreIndices()`, 161220662ed9SBarry Smith `ISLocalToGlobalMappingRestoreIndicesF90()` 16136ce40d10SBarry Smith M*/ 16146ce40d10SBarry Smith 16156ce40d10SBarry Smith /*MC 16166ce40d10SBarry Smith ISLocalToGlobalMappingRestoreIndicesF90 - restores the global indices for every local point that is mapped obtained with `ISLocalToGlobalMappingGetIndicesF90()` 16176ce40d10SBarry Smith 16186ce40d10SBarry Smith Synopsis: 16196ce40d10SBarry Smith ISLocalToGlobalMappingRestoreIndicesF90(ISLocalToGlobalMapping ltog, PetscInt, pointer :: array(:)}, integer ierr) 16206ce40d10SBarry Smith 16216ce40d10SBarry Smith Not Collective 16226ce40d10SBarry Smith 16236ce40d10SBarry Smith Input Parameters: 16246ce40d10SBarry Smith + A - the matrix 16256ce40d10SBarry Smith - array - array of indices, the length of this array may be obtained with `ISLocalToGlobalMappingGetSize()` 16266ce40d10SBarry Smith 16276ce40d10SBarry Smith Level: advanced 16286ce40d10SBarry Smith 162920662ed9SBarry Smith .seealso: [](sec_fortranarrays), [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingGetIndices()`, `ISLocalToGlobalMappingRestoreIndices()`, 163020662ed9SBarry Smith `ISLocalToGlobalMappingGetIndicesF90()` 16316ce40d10SBarry Smith M*/ 16326ce40d10SBarry Smith 16331bd0b88eSStefano Zampini /*@C 1634107e9a97SBarry Smith ISLocalToGlobalMappingGetIndices - Get global indices for every local point that is mapped 163586994e45SJed Brown 163686994e45SJed Brown Not Collective 163786994e45SJed Brown 16384165533cSJose E. Roman Input Parameter: 163986994e45SJed Brown . ltog - local to global mapping 164086994e45SJed Brown 16414165533cSJose E. Roman Output Parameter: 1642cab54364SBarry Smith . array - array of indices, the length of this array may be obtained with `ISLocalToGlobalMappingGetSize()` 164386994e45SJed Brown 164486994e45SJed Brown Level: advanced 164586994e45SJed Brown 1646cab54364SBarry Smith Note: 1647cab54364SBarry Smith `ISLocalToGlobalMappingGetSize()` returns the length the this array 1648107e9a97SBarry Smith 164920662ed9SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingRestoreIndices()`, 165020662ed9SBarry Smith `ISLocalToGlobalMappingGetBlockIndices()`, `ISLocalToGlobalMappingRestoreBlockIndices()` 165186994e45SJed Brown @*/ 1652cc4c1da9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetIndices(ISLocalToGlobalMapping ltog, const PetscInt *array[]) 1653d71ae5a4SJacob Faibussowitsch { 165486994e45SJed Brown PetscFunctionBegin; 165586994e45SJed Brown PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 16564f572ea9SToby Isaac PetscAssertPointer(array, 2); 165745b6f7e9SBarry Smith if (ltog->bs == 1) { 165886994e45SJed Brown *array = ltog->indices; 165945b6f7e9SBarry Smith } else { 166045b6f7e9SBarry Smith PetscInt *jj, k, i, j, n = ltog->n, bs = ltog->bs; 166145b6f7e9SBarry Smith const PetscInt *ii; 166245b6f7e9SBarry Smith 16639566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(bs * n, &jj)); 166445b6f7e9SBarry Smith *array = jj; 166545b6f7e9SBarry Smith k = 0; 166645b6f7e9SBarry Smith ii = ltog->indices; 166745b6f7e9SBarry Smith for (i = 0; i < n; i++) 16689371c9d4SSatish Balay for (j = 0; j < bs; j++) jj[k++] = bs * ii[i] + j; 166945b6f7e9SBarry Smith } 16703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 167186994e45SJed Brown } 167286994e45SJed Brown 167386994e45SJed Brown /*@C 1674cab54364SBarry Smith ISLocalToGlobalMappingRestoreIndices - Restore indices obtained with `ISLocalToGlobalMappingGetIndices()` 167586994e45SJed Brown 167686994e45SJed Brown Not Collective 167786994e45SJed Brown 16784165533cSJose E. Roman Input Parameters: 167986994e45SJed Brown + ltog - local to global mapping 168086994e45SJed Brown - array - array of indices 168186994e45SJed Brown 168286994e45SJed Brown Level: advanced 168386994e45SJed Brown 1684cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingGetIndices()` 168586994e45SJed Brown @*/ 1686cc4c1da9SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreIndices(ISLocalToGlobalMapping ltog, const PetscInt *array[]) 1687d71ae5a4SJacob Faibussowitsch { 168886994e45SJed Brown PetscFunctionBegin; 168986994e45SJed Brown PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 16904f572ea9SToby Isaac PetscAssertPointer(array, 2); 1691c9cc58a2SBarry Smith PetscCheck(ltog->bs != 1 || *array == ltog->indices, PETSC_COMM_SELF, PETSC_ERR_ARG_BADPTR, "Trying to return mismatched pointer"); 169248a46eb9SPierre Jolivet if (ltog->bs > 1) PetscCall(PetscFree(*(void **)array)); 16933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 169445b6f7e9SBarry Smith } 169545b6f7e9SBarry Smith 169645b6f7e9SBarry Smith /*@C 169745b6f7e9SBarry Smith ISLocalToGlobalMappingGetBlockIndices - Get global indices for every local block 169845b6f7e9SBarry Smith 169945b6f7e9SBarry Smith Not Collective 170045b6f7e9SBarry Smith 17014165533cSJose E. Roman Input Parameter: 170245b6f7e9SBarry Smith . ltog - local to global mapping 170345b6f7e9SBarry Smith 17044165533cSJose E. Roman Output Parameter: 170545b6f7e9SBarry Smith . array - array of indices 170645b6f7e9SBarry Smith 170745b6f7e9SBarry Smith Level: advanced 170845b6f7e9SBarry Smith 1709cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingRestoreBlockIndices()` 171045b6f7e9SBarry Smith @*/ 1711cc4c1da9SBarry Smith PetscErrorCode ISLocalToGlobalMappingGetBlockIndices(ISLocalToGlobalMapping ltog, const PetscInt *array[]) 1712d71ae5a4SJacob Faibussowitsch { 171345b6f7e9SBarry Smith PetscFunctionBegin; 171445b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 17154f572ea9SToby Isaac PetscAssertPointer(array, 2); 171645b6f7e9SBarry Smith *array = ltog->indices; 17173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 171845b6f7e9SBarry Smith } 171945b6f7e9SBarry Smith 172045b6f7e9SBarry Smith /*@C 1721cab54364SBarry Smith ISLocalToGlobalMappingRestoreBlockIndices - Restore indices obtained with `ISLocalToGlobalMappingGetBlockIndices()` 172245b6f7e9SBarry Smith 172345b6f7e9SBarry Smith Not Collective 172445b6f7e9SBarry Smith 17254165533cSJose E. Roman Input Parameters: 172645b6f7e9SBarry Smith + ltog - local to global mapping 172745b6f7e9SBarry Smith - array - array of indices 172845b6f7e9SBarry Smith 172945b6f7e9SBarry Smith Level: advanced 173045b6f7e9SBarry Smith 1731cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingApply()`, `ISLocalToGlobalMappingGetIndices()` 173245b6f7e9SBarry Smith @*/ 1733cc4c1da9SBarry Smith PetscErrorCode ISLocalToGlobalMappingRestoreBlockIndices(ISLocalToGlobalMapping ltog, const PetscInt *array[]) 1734d71ae5a4SJacob Faibussowitsch { 173545b6f7e9SBarry Smith PetscFunctionBegin; 173645b6f7e9SBarry Smith PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 17374f572ea9SToby Isaac PetscAssertPointer(array, 2); 173808401ef6SPierre Jolivet PetscCheck(*array == ltog->indices, PETSC_COMM_SELF, PETSC_ERR_ARG_BADPTR, "Trying to return mismatched pointer"); 17390298fd71SBarry Smith *array = NULL; 17403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 174186994e45SJed Brown } 1742f7efa3c7SJed Brown 1743cc4c1da9SBarry Smith /*@ 1744f7efa3c7SJed Brown ISLocalToGlobalMappingConcatenate - Create a new mapping that concatenates a list of mappings 1745f7efa3c7SJed Brown 1746f7efa3c7SJed Brown Not Collective 1747f7efa3c7SJed Brown 17484165533cSJose E. Roman Input Parameters: 1749f7efa3c7SJed Brown + comm - communicator for the new mapping, must contain the communicator of every mapping to concatenate 1750f7efa3c7SJed Brown . n - number of mappings to concatenate 1751f7efa3c7SJed Brown - ltogs - local to global mappings 1752f7efa3c7SJed Brown 17534165533cSJose E. Roman Output Parameter: 1754f7efa3c7SJed Brown . ltogcat - new mapping 1755f7efa3c7SJed Brown 1756f7efa3c7SJed Brown Level: advanced 1757f7efa3c7SJed Brown 1758cab54364SBarry Smith Note: 1759cab54364SBarry Smith This currently always returns a mapping with block size of 1 1760cab54364SBarry Smith 176138b5cf2dSJacob Faibussowitsch Developer Notes: 1762cab54364SBarry Smith If all the input mapping have the same block size we could easily handle that as a special case 1763cab54364SBarry Smith 1764cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingCreate()` 1765f7efa3c7SJed Brown @*/ 1766d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingConcatenate(MPI_Comm comm, PetscInt n, const ISLocalToGlobalMapping ltogs[], ISLocalToGlobalMapping *ltogcat) 1767d71ae5a4SJacob Faibussowitsch { 1768f7efa3c7SJed Brown PetscInt i, cnt, m, *idx; 1769f7efa3c7SJed Brown 1770f7efa3c7SJed Brown PetscFunctionBegin; 177108401ef6SPierre Jolivet PetscCheck(n >= 0, comm, PETSC_ERR_ARG_OUTOFRANGE, "Must have a non-negative number of mappings, given %" PetscInt_FMT, n); 17724f572ea9SToby Isaac if (n > 0) PetscAssertPointer(ltogs, 3); 1773f7efa3c7SJed Brown for (i = 0; i < n; i++) PetscValidHeaderSpecific(ltogs[i], IS_LTOGM_CLASSID, 3); 17744f572ea9SToby Isaac PetscAssertPointer(ltogcat, 4); 1775f7efa3c7SJed Brown for (cnt = 0, i = 0; i < n; i++) { 17769566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogs[i], &m)); 1777f7efa3c7SJed Brown cnt += m; 1778f7efa3c7SJed Brown } 17799566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(cnt, &idx)); 1780f7efa3c7SJed Brown for (cnt = 0, i = 0; i < n; i++) { 1781f7efa3c7SJed Brown const PetscInt *subidx; 17829566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetSize(ltogs[i], &m)); 17839566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingGetIndices(ltogs[i], &subidx)); 17849566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(&idx[cnt], subidx, m)); 17859566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRestoreIndices(ltogs[i], &subidx)); 1786f7efa3c7SJed Brown cnt += m; 1787f7efa3c7SJed Brown } 17889566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingCreate(comm, 1, cnt, idx, PETSC_OWN_POINTER, ltogcat)); 17893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1790f7efa3c7SJed Brown } 179104a59952SBarry Smith 1792413f72f0SBarry Smith /*MC 1793cab54364SBarry Smith ISLOCALTOGLOBALMAPPINGBASIC - basic implementation of the `ISLocalToGlobalMapping` object. When `ISGlobalToLocalMappingApply()` is 1794413f72f0SBarry Smith used this is good for only small and moderate size problems. 1795413f72f0SBarry Smith 179620662ed9SBarry Smith Options Database Key: 1797a2b725a8SWilliam Gropp . -islocaltoglobalmapping_type basic - select this method 1798413f72f0SBarry Smith 1799413f72f0SBarry Smith Level: beginner 1800413f72f0SBarry Smith 1801cab54364SBarry Smith Developer Note: 1802cab54364SBarry Smith This stores all the mapping information on each MPI rank. 1803cab54364SBarry Smith 1804cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingSetType()`, `ISLOCALTOGLOBALMAPPINGHASH` 1805413f72f0SBarry Smith M*/ 1806d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode ISLocalToGlobalMappingCreate_Basic(ISLocalToGlobalMapping ltog) 1807d71ae5a4SJacob Faibussowitsch { 1808413f72f0SBarry Smith PetscFunctionBegin; 1809413f72f0SBarry Smith ltog->ops->globaltolocalmappingapply = ISGlobalToLocalMappingApply_Basic; 1810413f72f0SBarry Smith ltog->ops->globaltolocalmappingsetup = ISGlobalToLocalMappingSetUp_Basic; 1811413f72f0SBarry Smith ltog->ops->globaltolocalmappingapplyblock = ISGlobalToLocalMappingApplyBlock_Basic; 1812413f72f0SBarry Smith ltog->ops->destroy = ISLocalToGlobalMappingDestroy_Basic; 18133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1814413f72f0SBarry Smith } 1815413f72f0SBarry Smith 1816413f72f0SBarry Smith /*MC 1817cab54364SBarry Smith ISLOCALTOGLOBALMAPPINGHASH - hash implementation of the `ISLocalToGlobalMapping` object. When `ISGlobalToLocalMappingApply()` is 1818ed56e8eaSBarry Smith used this is good for large memory problems. 1819413f72f0SBarry Smith 182020662ed9SBarry Smith Options Database Key: 1821a2b725a8SWilliam Gropp . -islocaltoglobalmapping_type hash - select this method 1822413f72f0SBarry Smith 1823413f72f0SBarry Smith Level: beginner 1824413f72f0SBarry Smith 1825cab54364SBarry Smith Note: 1826cab54364SBarry Smith This is selected automatically for large problems if the user does not set the type. 1827cab54364SBarry Smith 1828cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingSetType()`, `ISLOCALTOGLOBALMAPPINGBASIC` 1829413f72f0SBarry Smith M*/ 1830d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode ISLocalToGlobalMappingCreate_Hash(ISLocalToGlobalMapping ltog) 1831d71ae5a4SJacob Faibussowitsch { 1832413f72f0SBarry Smith PetscFunctionBegin; 1833413f72f0SBarry Smith ltog->ops->globaltolocalmappingapply = ISGlobalToLocalMappingApply_Hash; 1834413f72f0SBarry Smith ltog->ops->globaltolocalmappingsetup = ISGlobalToLocalMappingSetUp_Hash; 1835413f72f0SBarry Smith ltog->ops->globaltolocalmappingapplyblock = ISGlobalToLocalMappingApplyBlock_Hash; 1836413f72f0SBarry Smith ltog->ops->destroy = ISLocalToGlobalMappingDestroy_Hash; 18373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1838413f72f0SBarry Smith } 1839413f72f0SBarry Smith 1840413f72f0SBarry Smith /*@C 1841cab54364SBarry Smith ISLocalToGlobalMappingRegister - Registers a method for applying a global to local mapping with an `ISLocalToGlobalMapping` 1842413f72f0SBarry Smith 1843cc4c1da9SBarry Smith Not Collective, No Fortran Support 1844413f72f0SBarry Smith 1845413f72f0SBarry Smith Input Parameters: 1846413f72f0SBarry Smith + sname - name of a new method 18472fe279fdSBarry Smith - function - routine to create method context 1848413f72f0SBarry Smith 184938b5cf2dSJacob Faibussowitsch Example Usage: 1850413f72f0SBarry Smith .vb 1851413f72f0SBarry Smith ISLocalToGlobalMappingRegister("my_mapper", MyCreate); 1852413f72f0SBarry Smith .ve 1853413f72f0SBarry Smith 1854ed56e8eaSBarry Smith Then, your mapping can be chosen with the procedural interface via 1855413f72f0SBarry Smith $ ISLocalToGlobalMappingSetType(ltog, "my_mapper") 1856413f72f0SBarry Smith or at runtime via the option 1857ed56e8eaSBarry Smith $ -islocaltoglobalmapping_type my_mapper 1858413f72f0SBarry Smith 1859413f72f0SBarry Smith Level: advanced 1860413f72f0SBarry Smith 1861cab54364SBarry Smith Note: 1862cab54364SBarry Smith `ISLocalToGlobalMappingRegister()` may be called multiple times to add several user-defined mappings. 1863413f72f0SBarry Smith 1864cab54364SBarry Smith .seealso: [](sec_scatter), `ISLocalToGlobalMappingRegisterAll()`, `ISLocalToGlobalMappingRegisterDestroy()`, `ISLOCALTOGLOBALMAPPINGBASIC`, 1865cab54364SBarry Smith `ISLOCALTOGLOBALMAPPINGHASH`, `ISLocalToGlobalMapping`, `ISLocalToGlobalMappingApply()` 1866413f72f0SBarry Smith @*/ 1867d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingRegister(const char sname[], PetscErrorCode (*function)(ISLocalToGlobalMapping)) 1868d71ae5a4SJacob Faibussowitsch { 1869413f72f0SBarry Smith PetscFunctionBegin; 18709566063dSJacob Faibussowitsch PetscCall(ISInitializePackage()); 18719566063dSJacob Faibussowitsch PetscCall(PetscFunctionListAdd(&ISLocalToGlobalMappingList, sname, function)); 18723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1873413f72f0SBarry Smith } 1874413f72f0SBarry Smith 1875cc4c1da9SBarry Smith /*@ 1876cab54364SBarry Smith ISLocalToGlobalMappingSetType - Sets the implementation type `ISLocalToGlobalMapping` will use 1877413f72f0SBarry Smith 1878c3339decSBarry Smith Logically Collective 1879413f72f0SBarry Smith 1880413f72f0SBarry Smith Input Parameters: 1881cab54364SBarry Smith + ltog - the `ISLocalToGlobalMapping` object 1882413f72f0SBarry Smith - type - a known method 1883413f72f0SBarry Smith 1884413f72f0SBarry Smith Options Database Key: 1885cab54364SBarry Smith . -islocaltoglobalmapping_type <method> - Sets the method; use -help for a list of available methods (for instance, basic or hash) 1886cab54364SBarry Smith 1887cab54364SBarry Smith Level: intermediate 1888413f72f0SBarry Smith 1889413f72f0SBarry Smith Notes: 189020662ed9SBarry Smith See `ISLocalToGlobalMappingType` for available methods 1891413f72f0SBarry Smith 1892cab54364SBarry Smith Normally, it is best to use the `ISLocalToGlobalMappingSetFromOptions()` command and 1893cab54364SBarry Smith then set the `ISLocalToGlobalMappingType` from the options database rather than by using 1894413f72f0SBarry Smith this routine. 1895413f72f0SBarry Smith 189638b5cf2dSJacob Faibussowitsch Developer Notes: 1897cab54364SBarry Smith `ISLocalToGlobalMappingRegister()` is used to add new types to `ISLocalToGlobalMappingList` from which they 1898cab54364SBarry Smith are accessed by `ISLocalToGlobalMappingSetType()`. 1899413f72f0SBarry Smith 190038b5cf2dSJacob Faibussowitsch .seealso: [](sec_scatter), `ISLocalToGlobalMappingType`, `ISLocalToGlobalMappingRegister()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingGetType()` 1901413f72f0SBarry Smith @*/ 1902d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingSetType(ISLocalToGlobalMapping ltog, ISLocalToGlobalMappingType type) 1903d71ae5a4SJacob Faibussowitsch { 1904413f72f0SBarry Smith PetscBool match; 19055f80ce2aSJacob Faibussowitsch PetscErrorCode (*r)(ISLocalToGlobalMapping) = NULL; 1906413f72f0SBarry Smith 1907413f72f0SBarry Smith PetscFunctionBegin; 1908413f72f0SBarry Smith PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 19094f572ea9SToby Isaac if (type) PetscAssertPointer(type, 2); 1910413f72f0SBarry Smith 19119566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)ltog, type, &match)); 19123ba16761SJacob Faibussowitsch if (match) PetscFunctionReturn(PETSC_SUCCESS); 1913413f72f0SBarry Smith 1914a0d79125SStefano Zampini /* L2G maps defer type setup at globaltolocal calls, allow passing NULL here */ 1915a0d79125SStefano Zampini if (type) { 19169566063dSJacob Faibussowitsch PetscCall(PetscFunctionListFind(ISLocalToGlobalMappingList, type, &r)); 1917a0d79125SStefano Zampini PetscCheck(r, PetscObjectComm((PetscObject)ltog), PETSC_ERR_ARG_UNKNOWN_TYPE, "Unable to find requested ISLocalToGlobalMapping type %s", type); 1918a0d79125SStefano Zampini } 1919413f72f0SBarry Smith /* Destroy the previous private LTOG context */ 1920dbbe0bcdSBarry Smith PetscTryTypeMethod(ltog, destroy); 1921413f72f0SBarry Smith ltog->ops->destroy = NULL; 1922dbbe0bcdSBarry Smith 19239566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)ltog, type)); 19249566063dSJacob Faibussowitsch if (r) PetscCall((*r)(ltog)); 19253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1926a0d79125SStefano Zampini } 1927a0d79125SStefano Zampini 1928cc4c1da9SBarry Smith /*@ 1929cab54364SBarry Smith ISLocalToGlobalMappingGetType - Get the type of the `ISLocalToGlobalMapping` 1930a0d79125SStefano Zampini 1931a0d79125SStefano Zampini Not Collective 1932a0d79125SStefano Zampini 1933a0d79125SStefano Zampini Input Parameter: 1934cab54364SBarry Smith . ltog - the `ISLocalToGlobalMapping` object 1935a0d79125SStefano Zampini 1936a0d79125SStefano Zampini Output Parameter: 1937a0d79125SStefano Zampini . type - the type 1938a0d79125SStefano Zampini 193949762cbcSSatish Balay Level: intermediate 194049762cbcSSatish Balay 194138b5cf2dSJacob Faibussowitsch .seealso: [](sec_scatter), `ISLocalToGlobalMappingType`, `ISLocalToGlobalMappingRegister()`, `ISLocalToGlobalMappingCreate()`, `ISLocalToGlobalMappingSetType()` 1942a0d79125SStefano Zampini @*/ 1943d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingGetType(ISLocalToGlobalMapping ltog, ISLocalToGlobalMappingType *type) 1944d71ae5a4SJacob Faibussowitsch { 1945a0d79125SStefano Zampini PetscFunctionBegin; 1946a0d79125SStefano Zampini PetscValidHeaderSpecific(ltog, IS_LTOGM_CLASSID, 1); 19474f572ea9SToby Isaac PetscAssertPointer(type, 2); 1948a0d79125SStefano Zampini *type = ((PetscObject)ltog)->type_name; 19493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1950413f72f0SBarry Smith } 1951413f72f0SBarry Smith 1952413f72f0SBarry Smith PetscBool ISLocalToGlobalMappingRegisterAllCalled = PETSC_FALSE; 1953413f72f0SBarry Smith 1954413f72f0SBarry Smith /*@C 1955cab54364SBarry Smith ISLocalToGlobalMappingRegisterAll - Registers all of the local to global mapping components in the `IS` package. 1956413f72f0SBarry Smith 1957413f72f0SBarry Smith Not Collective 1958413f72f0SBarry Smith 1959413f72f0SBarry Smith Level: advanced 1960413f72f0SBarry Smith 1961cab54364SBarry Smith .seealso: [](sec_scatter), `ISRegister()`, `ISLocalToGlobalRegister()` 1962413f72f0SBarry Smith @*/ 1963d71ae5a4SJacob Faibussowitsch PetscErrorCode ISLocalToGlobalMappingRegisterAll(void) 1964d71ae5a4SJacob Faibussowitsch { 1965413f72f0SBarry Smith PetscFunctionBegin; 19663ba16761SJacob Faibussowitsch if (ISLocalToGlobalMappingRegisterAllCalled) PetscFunctionReturn(PETSC_SUCCESS); 1967413f72f0SBarry Smith ISLocalToGlobalMappingRegisterAllCalled = PETSC_TRUE; 19689566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegister(ISLOCALTOGLOBALMAPPINGBASIC, ISLocalToGlobalMappingCreate_Basic)); 19699566063dSJacob Faibussowitsch PetscCall(ISLocalToGlobalMappingRegister(ISLOCALTOGLOBALMAPPINGHASH, ISLocalToGlobalMappingCreate_Hash)); 19703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1971413f72f0SBarry Smith } 1972