__FUNCT__ "User provided function" in public headers with inlines

Merged petsc/petsc into rmills/petsc master

Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex

PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which

Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex

PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which
drop the string name argument.

* barry/rm-xxxregisterdynamic: (82 commits)
...

Conflicts:
src/ts/interface/tsregall.c

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removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()

removed path argument to XXXInitializePackage() and XXXRegister()

removed XXXRegisterDynamic() but kept the APIs for everything else underneath the same
phase I of the update to handling registering function pointers

Merge branch 'barry/ams' into master

* commit 'eb4227cfdd169cc03749ba3ef12d3932f2f322bf': (24 commits)
forgotten files
basic snooping on PetscStack is now working
split AMSJavascript.py into A

Merge branch 'barry/ams' into master

* commit 'eb4227cfdd169cc03749ba3ef12d3932f2f322bf': (24 commits)
forgotten files
basic snooping on PetscStack is now working
split AMSJavascript.py into AMS.py for AMS javascript and AMSSnoopObjects.py for example showing published objects
fix bug in previous commit
added error returns for JSON-RPC AMS calls
don't let web accessor change length of array setting to publisher
Pass arrays of values back from webserver to AMS publisher
fix for last commit, missing errorcode and wrong variable name
KSPLogResidualHistory and SNESLogConvergenceHistory need to lock for AMS and have error checking when called
shutdown webserver if you started it on PetscFinalize(), what about when crash, should still shut it down
Added support for starting server automatically by application code messed around finding a bug in AMS
got value back from webclient to application
goddman script Jed sent me doesn;t work, it loses changes
split webserver into standalone problem that is not part of running PETSc application had to do this since impossible for AMS publisher and accessor to be in same application better to just totally redo AMS! But that is to large a project
moved webserver code to its own directory and file
added callback for changable fields in pyjs representation of AMS memories
add AMS viewer for PC, server can only run without any memory debugging
changed AMS publishing to use the Viewer model added simple AMS viewer for mat,ksp,snes,ts added --ksp/snes/ts_view_pre for starting the viewer before the solve (ugly but useful for AMS) added PetscStackCalls around AMS function calls when appropriate (note do not want these in webserver because do not webserver stopping just because AMS server is down
more work on moving AMS model to viewer
Fix for SNESSetConvergenceHistory() when input a is null
...

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Merge branch 'master' of bitbucket.org:petsc/petsc into knepley/plex

Merge branch 'master' into jed/ts-eimex

Sync to include Git conversion, PETSC_EXTERN, and minor API changes.

Conflicts:
src/ts/interface/tsregall.c

petscviewer.h: end with __FUNCT__ = "User provided function"

more work on moving AMS model to viewer

work on AMS interface, consistent naming, ams.h not included in petscviewer.h, no ifdefs

Hg-commit: 642571a1dc7109fdb7e5b0abb23bf260d10eb970

commit after merge

Hg-commit: d45994b710e27c421e3a611629d33b9d321ce16b

Split out petscviewertypes.h

Fixes missing include in petscoptions.h that was impacting tests.

Hg-commit: 8bcec53e19497af1488dd5b8010346dc31f3f222

moved hdf5 viewer prototypes to petscviewerhdf5.h

Hg-commit: 32e58a3b6cb82a35eeb5ad475bfc470fee3e4d45

Clean up a couple header dependencies

Hg-commit: 11d62dee14b4cd8f0885a0f296b51b3346d7e18a

removed PetscViewerBinaryMatlabOpen() and friends, incorporated functionality into binary PETSc viewer

Hg-commit: 1676211ea1509edcdd7a044ca5b8b543f443b8ab

convert PetscHDF5IntCast() to return error code

Hg-commit: d476a741ebdb31c468cdd10cfcab9e78f2cded9c

macros changed to static inline functions
output of example fixed for previous change to example

Hg-commit: 30b16dfe130e50978dcb99c50a8edfc8772fcf0f

Carefully stashed all \t recursively in include/. Makefile is the only (obvious) exception. Preserved formatting.

Hg-commit: 4b7cd8b76fd5dcfc12ae025d8d69e26ec632fb40

removed silly abreviations

Hg-commit: 0641f9ef776cf11cc3336b494981da756bf9d14f

removed unneeded typedef of function pointer, replaced with manual page for function pointer form

Hg-commit: fd77d06a99d62a828458b49ce06b6519a336ace5

Commit after merge.

Hg-commit: 7ae059cc471c053401c1d6a21c3e45b9d4418175

added appropriate #include to various synopsis in manual pages

Hg-commit: 649729772e487ab080652f3c9abb4b4203cfa79d

merge PetscSF implementation

Hg-commit: 98dccc99445b69cb7a66312149eb16fec359e294