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bee2cdfd
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| 14-Apr-2021 |
Satish Balay <balay@mcs.anl.gov> |
Merge branch 'haplav/feature-hdf5-relative-group' into 'main'
HDF5: support relative paths
See merge request petsc/petsc!3861
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| #
89e0ef10
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| 13-Apr-2021 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Add PetscViewerHDF5HasDataset().
PetscViewerHDF5*Object*: Check object is named.
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| #
4302210d
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| 13-Apr-2021 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
PetscViewerHDF5{{Has,Read,Write}Attribute,HasGroup}: Support absolute paths and relative subpaths.
Fix some inarg validation.
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| #
535716cb
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| 08-Apr-2021 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
petscviewerhdf5.h minor formatting
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| #
5e7c3d04
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| 21-Oct-2019 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/maint'
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adea5b23
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| 21-Oct-2019 |
Satish Balay <balay@mcs.anl.gov> |
Merge branch 'fix_hdf5_chunksize' into 'maint'
Fix hdf5 chunksize.
See merge request petsc/petsc!2187
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87de8cd9
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| 21-Oct-2019 |
Sajid Ali <sajidsyed2021@u.northwestern.edu> |
Being fixing hdf5 chunksize.
modified: include/petscviewerhdf5.h
modified: src/vec/vec/impls/mpi/pdvec.c
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| #
848fb877
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| 10-Aug-2019 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'haplav/fix-petscviewerhdf5pushgroup-empty-string' [PR #1950]
* haplav/fix-petscviewerhdf5pushgroup-empty-string:
fix/generalize PetscViewerHDF5PushGroup for empty string
- add dm_impl
Merge branch 'haplav/fix-petscviewerhdf5pushgroup-empty-string' [PR #1950]
* haplav/fix-petscviewerhdf5pushgroup-empty-string:
fix/generalize PetscViewerHDF5PushGroup for empty string
- add dm_impls_plex_{tests-ex18_9%,tutorials-ex5_9%} loading an HDF5/XDMF file with custom naming
- PetscViewerHDF5{Push,Get}Group: *name -> name[] to unify with the rest of header file
- PetscViewerHDF5PushGroup: Allow to push NULL, "", or all slashes.
In all cases, store NULL, interpret as "/".
This also fixes the problem in DMPlexLoad_HDF5_Xdmf_Internal() when the specified datasets locations are in / (like e.g. -dm_plex_hdf5_topology_path /cells in the new examples).
show more ...
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| #
be7aa430
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| 05-Aug-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
PetscViewerHDF5{Push,Get}Group: **name -> *name[] to unify with the rest of header file
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1c575b32
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| 07-Jul-2019 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'maint'
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26bd1501
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| 05-Jul-2019 |
Barry Smith <bsmith@mcs.anl.gov> |
Remove use of _ and __ in front of PETSc include guards. Reason: C99 Reserved Identifiers
Commit-type: portability-fix
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8dd7b8de
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| 26-Jun-2019 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'hapla/hide-hdf5-headers-for-non-hdf5' [PR #1800]
* hapla/hide-hdf5-headers-for-non-hdf5:
Hide all petscviewerhdf5.h headers for !defined(PETSC_HAVE_HDF5)
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| #
6d18d956
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| 19-Jun-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
move PetscStackCallHDF5* to private header file
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| #
7847244b
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| 08-May-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Hide all petscviewerhdf5.h headers for !PETSC_HAVE_HDF5.
Nobody should use PetscViewerHDF5* stuff HDF5 is not available.
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| #
bf66e065
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| 12-Jun-2019 |
Václav Hapla <vaclav.hapla@erdw.ethz.ch> |
Merged in haplav/feature-hdf5-collective-options (pull request #1737)
add ability to turn on/off HDF5 collective transfer mode
Approved-by: Matthew Knepley <knepley@gmail.com>
Approved-by: BarryFSm
Merged in haplav/feature-hdf5-collective-options (pull request #1737)
add ability to turn on/off HDF5 collective transfer mode
Approved-by: Matthew Knepley <knepley@gmail.com>
Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
show more ...
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| #
ee8b9732
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| 22-May-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Add PetscViewerHDF5{Get,Set}Collective and -viewer_hdf5_collective.
* Use H5_VERSION_GE to decide HDF5 version.
* If H5_VERSION_GE undefined, define it as 0.
* Discussed in https://bitbucket.org/pet
Add PetscViewerHDF5{Get,Set}Collective and -viewer_hdf5_collective.
* Use H5_VERSION_GE to decide HDF5 version.
* If H5_VERSION_GE undefined, define it as 0.
* Discussed in https://bitbucket.org/petsc/petsc/pull-requests/1737/add-ability-to-turn-on-off-hdf5-collective/diff#comment-105015892
show more ...
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7a003026
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| 26-May-2019 |
Jed Brown <jed@59a2.org> |
Merged in jed/sizeof (pull request #1706)
Migrate sizeof-related definitions to run-time/non-batch as appropriate
Approved-by: Lisandro Dalcin <dalcinl@gmail.com>
Approved-by: BarryFSmith <bsmith@m
Merged in jed/sizeof (pull request #1706)
Migrate sizeof-related definitions to run-time/non-batch as appropriate
Approved-by: Lisandro Dalcin <dalcinl@gmail.com>
Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
Approved-by: Jed Brown <jed@59a2.org>
show more ...
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| #
84ccb19e
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| 23-May-2019 |
Jed Brown <jed@jedbrown.org> |
PetscHDF5IntCast: use H5_SIZEOF_HSIZE_T and use more accurate signed limit
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5065da2f
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| 13-May-2019 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' of bitbucket.org:petsc/petsc
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| #
7eda4a2b
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| 11-May-2019 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/maint'
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3f4531c4
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| 11-May-2019 |
Václav Hapla <vaclav.hapla@erdw.ethz.ch> |
Merged in haplav/fix-hdf5v-circular-dependencies (pull request #1643)
fix hdf5v circular dependencies
Approved-by: Matthew Knepley <knepley@gmail.com>
Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
Merged in haplav/fix-hdf5v-circular-dependencies (pull request #1643)
fix hdf5v circular dependencies
Approved-by: Matthew Knepley <knepley@gmail.com>
Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
Approved-by: Jed Brown <jed@59a2.org>
show more ...
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| #
49523f81
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| 11-May-2019 |
Václav Hapla <vaclav.hapla@erdw.ethz.ch> |
Merged in haplav/remove-petscviewerhdf5setaijnames (pull request #1644)
Get rid of PetscViewerHDF5{Get,Set}AIJNames().
Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
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| #
5dc64a97
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| 07-May-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Get rid of PetscViewerHDF5{Get,Set}AIJNames().
fix-issue-289
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| #
4e97f8eb
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| 08-May-2019 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Move HDF5 array IO stuff from sys to vec.
- Fix issue 288.
- Moved PetscViewerHDF5Load,PetscViewerHDF5ReadSizes and their helpers from
src/sys/classes/viewer/impls/hdf5/hdf5v.c
into the new fi
Move HDF5 array IO stuff from sys to vec.
- Fix issue 288.
- Moved PetscViewerHDF5Load,PetscViewerHDF5ReadSizes and their helpers from
src/sys/classes/viewer/impls/hdf5/hdf5v.c
into the new file
src/vec/is/utils/hdf5io.c
- PetscViewerHDF5Load() header moved from viewerimpl.h to petscis.h
- PetscViewerHDF5ReadSizes() header moved from petscviewerhdf5.h to petscis.h
show more ...
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| #
a041468a
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| 06-Mar-2019 |
Lawrence Mitchell <lawrence@wence.uk> |
Merge branch 'master' into wence/feature-patch-all-at-once
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