Add node location and trimmed space options to PETSCDUALSPACELAGRANGE

Ameliorate Lagrange setup time by reducing what gets created in recursive calls

Remove stubs of variable order code until it ca

Add node location and trimmed space options to PETSCDUALSPACELAGRANGE

Ameliorate Lagrange setup time by reducing what gets created in recursive calls

Remove stubs of variable order code until it can be handled by its own topic branch

Add trimmed to viewer description of lagrange spaces

Control trimmed status of lagrange spaces from command line

Fix errors in setting node types

Fix uninitialized flag

update some tests

update some tests

Don't compute symmetries if tensorCell != tensorSpace

Address pipline errors, squash uninitialized warnings and fixing complex builds

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Rework the PetscDualSpace interface

Mention form degree in viewer output of dual space

Set from degree from options for dual space

Merge remote-tracking branch 'origin/barry/add-petscarrayxxx-ops' [PR #1771]

Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new forms

Replace a couple multi-mallocs with a single malloc
Replace backwards loops in MatSetValues_*()

Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new forms

Replace a couple multi-mallocs with a single malloc
Replace backwards loops in MatSetValues_*() with PetscArraymove()

Commit-type: style-fix, feature

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Merged in barry/update-collective-on (pull request #1744)

Update the use of Collective on in the manual pages to reflect the new style

Update the use of Collective on in the manual pages to reflect the new style

Commit-type: style-fix, documentation
Thanks-to: Patrick Sanan <patrick.sanan@gmail.com>

Merged in psanan/man-pages-remove-keywords (pull request #1717)

Man pages: Remove .keywords fields

Approved-by: BarryFSmith <bsmith@mcs.anl.gov>

Man pages: remove .keywords: fields

This field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),
but it doesn't seem to be unif

Man pages: remove .keywords: fields

This field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),
but it doesn't seem to be uniformly used or maintained.

Thus, remove all .keywords: fields, and a following blank line, if present.

This is accomplished with GNU sed (gsed on OS X), with the following commands.
*Warning* that this type of command can corrupt a .git directory,
so be cautious in reusing or modifying these commands. They first look
for and delete matching lines with a following line consisting of only whitespace,
and then delete any remaining matching lines.

find src/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} +
find src/ -type f -exec gsed -i '/keywords:/d' {} +
find include/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} +
find include/ -type f -exec gsed -i '/keywords:/d' {} +

Hints on the sed command obtained from: https://unix.stackexchange.com/questions/100754/how-to-delete-a-specific-line-and-the-following-blank-line-using-gnu-sed

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Merged in knepley/feature-dualspace-cleanup (pull request #1586)

Knepley/feature dualspace cleanup

Approved-by: BarryFSmith <bsmith@mcs.anl.gov>

PetscDualSpace: Reorganized code in Lagrange, but did not change functionality
- Moved LatticePoint and TensorPoint iterators to DualSpace
- Moved GetSymmetries() to DualSpace
- Moved LagrangeGet/Set

PetscDualSpace: Reorganized code in Lagrange, but did not change functionality
- Moved LatticePoint and TensorPoint iterators to DualSpace
- Moved GetSymmetries() to DualSpace
- Moved LagrangeGet/SetTensor() to Lagrange

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Merge branch 'master' into jpusztay/feature-swarm-symplectic-example

Merge branch 'master' into jpusztay/feature-swarm-symplectic-example

Merged petsc/petsc into master

Merged petsc/petsc into master

Merge branch 'master' into knepley/feature-snes-patch

Merge branch 'knepley/fix-fe-names'

Merge remote-tracking branch 'origin/knepley/fix-fe-names' into knepley/feature-multiple-ds

* origin/knepley/fix-fe-names:
Field ex1: Set names for consistent output
DT ex5: Set names for consis

Merge remote-tracking branch 'origin/knepley/fix-fe-names' into knepley/feature-multiple-ds

* origin/knepley/fix-fe-names:
Field ex1: Set names for consistent output
DT ex5: Set names for consistent output
FE: Set names when creating trace space
PetscFE: Fix naming of sub objects - This allows PetscDS output to look sensible

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PetscFE: Fix naming of sub objects
- This allows PetscDS output to look sensible

Merge branch 'master' into knepley/fix-plex-partition-parallel

* master: (414 commits)
very small updates to users manual
syntax is define(XXX) in examples tests not defined(XXX)
Increase patc

Merge branch 'master' into knepley/fix-plex-partition-parallel

* master: (414 commits)
very small updates to users manual
syntax is define(XXX) in examples tests not defined(XXX)
Increase patchlevel to 3.10.3
petsc4py: updat to latest maint snapshot with SNESTEST updates
Fix link for CUDA example in PETSc from GPUs.html page Minor fixes to installation instructions
Mat: Fixed types in Pardiso interface
Converted example comment to latex
This example crashes (for unknown reasons, probably related to the handling of extended derived types passed as arguments) with the PGI Fortran compiler
Remove outdated requires: from top of several examples
remove outdated test requires: command from top of source file
Fix the documentation for -ksp_gmres_cgs_refinement_type
Commit f20c2d659b168217cb455989f28afe052d71a64c broke lex.py so the users manual was no longer being built. There reverted the changes to lex.py
Plex: Add PetscPartitioner to fort list Suggested-by: Jiaoyan Li <Jiaoyan.Li@inl.gov>
Doc: Fix spelling Suggested-by: Manuel Colera Rico <m.colera@upm.es>
Mat ex88: check in double or quad precision only
Fix error with PetscComplex when PETSc is compiled with C and used in C++
configure: fix typo endwith -> endswith
Sys ex23: Migrated to ts_max_time in yaml file as well.
AO ex5: Fixed missing CHKERRQ();
Mat test ex88: add tests for MatMultAdd and MatMultTranposeAdd
...

Conflicts:
src/dm/impls/plex/examples/tests/ex12.c

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Merge branch 'master' into knepley/feature-snes-patch

Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCo

Merge branch 'master' into knepley/feature-snes-patch

Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCompositeType), and I don't know how to fix it.

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Merged petsc/petsc into master

Merged petsc/petsc into master

Merge branch 'dalcinl/fix-petscfe-view' [PR #1234]

PetscFE: Better output for ASCII viewer

Merge branch 'master' into jpusztay/feature-swarm-symplectic-example