rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()

add PetscAssert() and PetscAssertFalse()

SETERRQ[1-9]+ begone

Merge branch 'jacobf/2021-12-09/attribute-format-mat' into 'main'

Feature: Attribute Format - Mat

See merge request petsc/petsc!4634

Merge branch 'knepley/feature-plex-multiple-hybrid' into 'main'

DM+FE: Allow multiple cohesive fields

See merge request petsc/petsc!4616

FE+DS: Now hybrid integration uses side 2 for fault operations
- Added cohesive offsets of PetscDS
- Fixed offsets and handling of dimension

DM+FE: Allow multiple cohesive fields
- Changed name from "hybrid" cell to "cohesive" cell
- Fixed check for cohesive field in PetscFE and DM
- Fixed DMCreateDS() for new scheme
- Added PetscDSIsCohe

DM+FE: Allow multiple cohesive fields
- Changed name from "hybrid" cell to "cohesive" cell
- Fixed check for cohesive field in PetscFE and DM
- Fixed DMCreateDS() for new scheme
- Added PetscDSIsCohesive() and PetscDSGetNumCohesive()
- Replaced PetscDSGetHybrid() with PetscDSGetCohesive() and
PetscDSSetHybrid() with PetscDSSetCohesive()
- Added PetscDSGetFieldOffsetCohesive()
- Fixed hybrid Jacobian integration
- Hybrid Jacobian integration needs to know the side of the interface, just like residual integration
- Needs to use cohesive field offsets
- Update takes the side as an argument

show more ...

remove trailing newline from SETERRQ

Merge branch 'knepley/fix-hybrid-integration' into 'main'

FE: PetscFEIntegrateHybridResidual() needs to know the side of the face it is integrating

See merge request petsc/petsc!4400

FE: PetscFEIntegrateHybridResidual() needs to know the side of the face it is integrating
- Fixed wrong init for hybrid elem vec
- We no longer give data for both sides in one kernel

Merge branch 'knepley/fix-plex-refine-bc' into 'main'

DM+DT: Fix for equation copying

See merge request petsc/petsc!4270

DM+DT: Fix for equation copying
- Use PetscWeakFormCopy() in PetscDSCopyEquations()
- Replace labels in DMCopyDS()
- More debugging in FE

Merge branch 'knepley/fix-plex-nonaffine-integration' into 'main'

FE: Fix non-affine integration

See merge request petsc/petsc!4009

FE: Fix non-affine integration
- The test function gradients were being pushed forward with the wrong
Jacobian
- Affine worked because the last Jacobian was always being used

Merge branch 'knepley/feature-dm-aux-data-keys' into 'main'

Plex: Updates to declarative interface for FEM problems

See merge request petsc/petsc!3972

DT: Changed key and WeakForm internals
- Changed name to PetscFormKey
- Added part member
- Now maps are referred to by PetscWeakFormKind
- Added PetscWeakFormClearIndex() and PetscWeakFormClear()

DT: Changed key and WeakForm internals
- Changed name to PetscFormKey
- Added part member
- Now maps are referred to by PetscWeakFormKind
- Added PetscWeakFormClearIndex() and PetscWeakFormClear()
- Passing NULL to SetIndex is now ignored
- Added tests

show more ...

Plex: DMPlexComputeJacobian_Hybrid_Internal() updated to uses keys
- Need to translate points from original DM to auxiliary DM for hybrid aux values

FE: Check number of function rather than pointer

Merge branch 'knepley/feature-plex-ceed-integration' into 'main'

Plex: Initial CEED integration

See merge request petsc/petsc!3918

DMField: Fix bug in face data
- The supporting cells should be evaluated on the original quadrature,
not a different cell quadrature that is not saved

Merge branch 'knepley/feature-ds-residualbd-key' into 'main'

DS+FE+Doc: Make BdResidual take a key

See merge request petsc/petsc!3761

DM+Plex: Boundary integration functions are now stored in a PetscWeakForm held in the Boundary object
- Boundary residual/Jacobian functions now take a form key
- Now store DMLabel in DSBoundary
- Im

DM+Plex: Boundary integration functions are now stored in a PetscWeakForm held in the Boundary object
- Boundary residual/Jacobian functions now take a form key
- Now store DMLabel in DSBoundary
- Improved Boundary, Weak Form, and DS viewers
- Remove DMCopyBoundary(), DMCopyDisc() is sufficient
- Need DMTransferDS_Internal() to create new DS with label in the correct DM
- Correct all DMAddBoundary() in tests
- Allow DMBoundary to hold just a label name if necessary since p4est is missing labels in a lot of places
- Fix propagating coordinate dimension in DS

show more ...

DS+FE+Doc: Make BdResidual take a key
- Add documentation

Merge branch 'knepley/feature-plex-ds-traversals' into 'main'

DS: Moved management of pointwise functions into PetscWeakForm object - Added...

See merge request petsc/petsc!3726

Plex+DS: Moved management of pointwise functions into PetscWeakForm object
- Added PetscChunkBuffer to manage contiguous buffer space
- WeakForm can index functions by Label/val, field
- WeakForm

Plex+DS: Moved management of pointwise functions into PetscWeakForm object
- Added PetscChunkBuffer to manage contiguous buffer space
- WeakForm can index functions by Label/val, field
- WeakForm allows multiple kernels per key

show more ...