Merge branch 'knepley/fix-plex-bdjac-integration' into 'main'

Fix boundary Jacobian integration

See merge request petsc/petsc!7117

PetscFE: Add Jacobian type argument to PetscFEIntegrateBdJacobian()

Merge branch 'baagaard/update-plex-ex5-fault-projection' into 'main'

Fixes for projection between different dimensional meshes

See merge request petsc/petsc!7079

FE: Integration over a cohesive cell of a non-cohesive field should use both sides

Merge branch 'zach/bug-dm-swarm-tensor-permutation' into 'main'

Plex: Bug fix and tests for coordinate tensor ordering

See merge request petsc/petsc!6843

Plex: Various tensor ordering fixes

Cherry-picked from @knepley:
- DMPlexMatSetClosureGeneral() now takes flag for closure permutation
- Add DMPlexMatSetClosure_Internal() which takes flag for closu

Plex: Various tensor ordering fixes

Cherry-picked from @knepley:
- DMPlexMatSetClosureGeneral() now takes flag for closure permutation
- Add DMPlexMatSetClosure_Internal() which takes flag for closure permutation
- Add DMPlexVecGetClosure_Internal() with flag to turn off closure permutation
- Turn off closure permutation in L2 diff calculation
- Add DMUseTensorOrder()
- Add DMPlexSNESComputeResidualCEED()
- Cleanup SNES ex13

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Merge branch 'tisaac/feature-petscfe-vector-in-use' into 'main'

Use PETSCFEVECTOR throughout Petsc

See merge request petsc/petsc!6833

PetscFE: add PETSCFEVECTOR

Reductions in the cost of computing, storing, and applying
a Tabulation can be achieved for a finite element space
that is a vector of "scalar" finite elements (the "scala

PetscFE: add PETSCFEVECTOR

Reductions in the cost of computing, storing, and applying
a Tabulation can be achieved for a finite element space
that is a vector of "scalar" finite elements (the "scalar"
element itself could be vector-valued).

Reductions in the cost of storing and applying
a Tabulation can't be realized until the PetscTabulation structure
itself is changed, but at the very least reduction in the cost of
computing a tabulation is possible with a new PetscFEType,
PETSCFEVECTOR.

To complete the interface, we also add PETSCDUALSPACESUM,
a dual space whose dual basis is the sum of other dual bases,
that parallels PETSCSPACESUM (the space and dual space of
a PETSCFEVECTOR are a PETSCSPACESUM and PETSCDUALSPACESUM,
respectively).

To allow the user to specify whether the
basis vector and value components of the PETSCFEVECTOR
of blockwise or interleaved, we also have to make sure
PETSCSPACESUM and PETSCDUALSPACESUM can have blockwise
or interleaved behavior. We add both capabilities.

PETSCFEVECTOR is now used by detecting compatible
vector-valued dual and primal spaces in PetscFECreateFromSpaces().

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Merge branch 'jacobf/2023-08-09/linter-detect-static-function-candidates' into 'main'

Linter detect possible static functions

See merge request petsc/petsc!6796

Add static to internal functions

Merge branch 'knepley/fix-cohesive-offsets' into 'main'

Fixes for Pylith

See merge request petsc/petsc!6775

Plex+FEM: Give all input data to each side of fault

Plex: Hybrid cells cannot have derivatives in the transverse direction

Merge branch 'knepley/fix-cohesive-integration' into 'main'

Plex: Fix orientation when integrating cohesive faces

See merge request petsc/petsc!6599

Plex: Fix orientation when integrating cohesive faces
- Need to incorporate orientation of endcaps
- Fix debugging output

Merge branch 'knepley/fix-fe-0dim' into 'main'

FE: Protect against 0-dim calls

See merge request petsc/petsc!6472

FE: Protect against 0-dim calls

Merge branch 'knepley/feature-hybrid-mass' into 'main'

Plex: Can now specify a mass weighting to hybrid residual

See merge request petsc/petsc!6210

Plex+FE: Fixed cohesive cell integration
- Now PetscFEGeom face data also calculates orientations
- Added DMPlexReorderCohesiveSupports()
- Now ensure that cohesive cell end cap supports are oriented

Plex+FE: Fixed cohesive cell integration
- Now PetscFEGeom face data also calculates orientations
- Added DMPlexReorderCohesiveSupports()
- Now ensure that cohesive cell end cap supports are oriented
- Match quadrature from cohesive end caps with bulk cells

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Plex: Can now specify a mass weighting to hybrid residual
- This is not a complete fix. We need to match up quadrature points across the interface.

Merge branch 'jacobf/2022-12-10/petscerrorcode-nodiscard' into 'main'

Feature: Non-discardable PetscErrorCode

See merge request petsc/petsc!5923

Make PetscErrorCode a non-discardable enum

Merge remote-tracking branch 'origin/release'

Merge branch 'barry/2022-10-27/fix-dmcoordiate-man/release' into 'release'

fix/update manual pages in various places in src/dm

See merge request petsc/petsc!5784

Fix manual pages in a variety of parts of src/dm

Still many other parts of DM need to have their manual pages updated

Commit-type: housekeeping
/spend 4h