| #
bc196f7c
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| 04-Feb-2015 |
Dave May <dave.mayhem23@gmail.com> |
PetscViewerBinary: API changes for getting/setting MPI-IO
The binary viewer did not have a consistent API to Get/Set the MPI-IO flag.
Changeset includes:
* Renamed PetscViewerBinaryGetMPIIO() to Pet
PetscViewerBinary: API changes for getting/setting MPI-IO
The binary viewer did not have a consistent API to Get/Set the MPI-IO flag.
Changeset includes:
* Renamed PetscViewerBinaryGetMPIIO() to PetscViewerBinaryGetUseMPIIO()
* Removed PetscViewerBinarySetMPIIO() and introduced new the API
PetscViewerBinarySetUseMPIIO(PetscViewer,PetscBool)
The API change will be immediately obvious to users and have minimal impact due to the function name change.
* Consistency updates to PetscViewerSetFromOptions_Binary()
show more ...
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| #
0c169764
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| 30-Jan-2015 |
dmay <dave.mayhem23@gmail.com> |
Ensure the DMDA PetscViewerBinary writer using
MPI-IO functionality respects the skip header
flag when wither writing or reading files.
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| #
9704d4df
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| 02-Feb-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/feature-vec-lock'
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| #
5edff71f
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| 23-Jan-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Added VecLockPush/Pop() around SNES callbacks etc
Added DADAVecGetArray[DOF]Read()
Added use of GetArrayRead() as needed
Added many more const as needed
Note DMDAVecGetArray[DOF]Read() does not yet
Added VecLockPush/Pop() around SNES callbacks etc
Added DADAVecGetArray[DOF]Read()
Added use of GetArrayRead() as needed
Added many more const as needed
Note DMDAVecGetArray[DOF]Read() does not yet require correctly consted argument
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| #
4653a54d
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| 26-Dec-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/ksp-converged-reason-viewer
Conflicts:
src/sys/objects/options.c
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| #
bbb47a3f
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| 26-Dec-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-hdf5-complex'
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| #
457e2cda
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| 26-Dec-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-hdf5'
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| #
729ab6d9
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| 16-Dec-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
moved the rest of the HDF5 calls behind PetscStackCall's
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| #
7d310018
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| 15-Dec-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
fix for using complex numbers with VecView_MPI_HDF5_DA() code crashed when viewing complex vector from one dimensional DA
This may not be a complete fix for the problem, but it resolves the problem o
fix for using complex numbers with VecView_MPI_HDF5_DA() code crashed when viewing complex vector from one dimensional DA
This may not be a complete fix for the problem, but it resolves the problem of using da->n and p when they are never set in the viewer and calculating the wrong target size
Reported-by: Andre Brand <andre.brand@uni-bayreuth.de>
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| #
909a08a4
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| 28-Nov-2014 |
Michael Lange <michael.lange@imperial.ac.uk> |
Merge branch 'master' into mlange/refactor-plex-distribute
Conflicts:
src/dm/impls/plex/examples/tests/output/ex12_1.out
src/dm/impls/plex/examples/tests/output/ex12_2.out
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| #
c0c81d0c
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| 18-Nov-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-vecload-group-handling' into maint
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| #
31038c0d
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| 18-Nov-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-vecload-group-handling'
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| #
bfd264e7
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| 14-Nov-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
VecLoad_HDF5_DA() ignored group information
Reported-by: Hakon Strandenes <haakon@hakostra.net>
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| #
dafab42b
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| 22-Aug-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-dm-dimension-handling'
* knepley/feature-dm-dimension-handling:
DM: Fixed DMDASetDim() in examples
Plex: Fix for isoparametric geometry
Plex: Complex fix
TS ex1
Merge branch 'knepley/feature-dm-dimension-handling'
* knepley/feature-dm-dimension-handling:
DM: Fixed DMDASetDim() in examples
Plex: Fix for isoparametric geometry
Plex: Complex fix
TS ex11: Fixed calls to DMSetCoordinateSection()
DM: FIxed DMClone() to copy dimension
Plex+DA: Now cell geometry routine can take a PetscFE in order to evaluate at quadrature points - We evaluate isoparametrically at the quadrature points - Changed DMDAComputeCellGeometry() --> DMDAComputeCellGeometryFEM() - Changed DMPlexComputeCellGeometry() --> DMPlexComputeCellGeometryFEM() - Added DMPlexComputeCellGeometryAffineFEM()
DM: Added a embedding dimension, different from the topological dimension - This can now be set in DMSetCoordinateSection(), or it can be automatically determined
Plex: Fix output for ex4
DM: Added DMGetDimPoints() - This replicates DMPlex/DAGetDepthStratum(), but uses the dimension which people have said is more intuitive
DM: Move dimension up into DM - Both DA and Plex had this and I think it makes sense
Conflicts:
src/dm/impls/plex/plexcreate.c
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| #
50880cf6
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| 02-Aug-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'maint'
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| #
7dcbdad1
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| 02-Aug-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'maint' of bitbucket.org:petsc/petsc into maint
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| #
2f1102d3
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| 01-Aug-2014 |
Lisandro Dalcin <dalcinl@gmail.com> |
Merged in dalcinl/vecview-da-2d (pull request #183)
Fixes to VecView() for 2d DMDAs with curvilinear coordinates
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| #
c73cfb54
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| 31-Jul-2014 |
Matthew G. Knepley <knepley@gmail.com> |
DM: Move dimension up into DM
- Both DA and Plex had this and I think it makes sense
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| #
a39a4c7d
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| 30-Jul-2014 |
Lisandro Dalcin <dalcinl@gmail.com> |
DMDA: Fix VecView() for two-dimensional grids with curvilinear coordinates
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| #
953e6c96
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| 29-Jul-2014 |
Lisandro Dalcin <dalcinl@gmail.com> |
DMDA: Fix VecView() displaying of coordinate limits in parallel
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| #
b015001c
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| 28-May-2014 |
Peter Brune <brune@mcs.anl.gov> |
Merge branch 'master' into prbrune/snes-fascontinuation
* master: (855 commits)
fix for moab example had wrong blocksize of mapping
docs:remove src/docs/doxygen/manual [per Barry's instructions]
Merge branch 'master' into prbrune/snes-fascontinuation
* master: (855 commits)
fix for moab example had wrong blocksize of mapping
docs:remove src/docs/doxygen/manual [per Barry's instructions]
gfortran: remove 132 char limit from f90 free-form
SNES: Set up matrix-free *after* copying the user Jacobian to snes->pc
DMPlex-Gmsh: Use trueNumCells when building the coordinate section
Sys: Got guard logic reversed
Sys: The #define guard for PetscMalloc*() must match the one for PetscFree*()
PetscFV: I hate fucking complex
removed ltog scatter from DMDA since functionality can be obtained with gtol scatter and less memory
fix test of DMLocalToGlobalBegin/End and add actual test cases
improve object memory logging for DA, ISLocalToGlobal and ISBLOCK
lower high water mark of constructing parallel scatter by allocating only as much room in svalues as needed
owner in VecScatter construction is the rank, therefor can use PetscMPIInt to hold it do not PetscInt
another reuse of allocated array in 2d/3d DMDA create
improved high water mark of DMDASetups by implementing and using PETSC_USE_POINTER for ISCreateBlock()
PetscFV: Another complex fix
DMPlex+TS: Fixing types
ISIdentity() was wrong for block IS! Indices are NOT scaled by bs
PetscFV: Straighten out complex types
TS ex11: Fix casts and remove unused variable
...
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| #
92c494f3
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| 23-May-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/saws-options
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| #
95ecbf38
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| 18-May-2014 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/pcbddc-multilevel-improvement
Conflicts:
src/docs/website/documentation/changes/dev.html
src/ksp/ksp/examples/tutorials/ex59.c
src/ksp/pc/impls/bddc/bdd
Merge branch 'master' into stefano_zampini/pcbddc-multilevel-improvement
Conflicts:
src/docs/website/documentation/changes/dev.html
src/ksp/ksp/examples/tutorials/ex59.c
src/ksp/pc/impls/bddc/bddcprivate.c
show more ...
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| #
b2533dd1
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| 22-Mar-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Fixing merge conflicts in dmregall.
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| #
204681ed
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| 19-Mar-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merged petsc/petsc into master
|