| #
e5c6e791
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| 15-Mar-2016 |
Karl Rupp <rupp@iue.tuwien.ac.at> |
Plex: Fixed missing include of header for VecView_Seq()
Reported-by: Matt Knepley via petsc-dev
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| #
266b9d3e
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| 11-Mar-2016 |
Alejandro Lamas Daviña <alejandro.lamas@dsic.upv.es> |
Fix visibility issues in CUSP and VECCUDA
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| #
bf4602e4
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| 10-Mar-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: fix empty partition errors
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| #
eba35f42
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| 09-Mar-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'mlange/fix-plex-multi-level-overlap'
* mlange/fix-plex-multi-level-overlap: (259 commits)
Plex: Update ex12_5 with correct level-2 overlap
DMLabel: Add missing cleanup for DMLabelG
Merge branch 'mlange/fix-plex-multi-level-overlap'
* mlange/fix-plex-multi-level-overlap: (259 commits)
Plex: Update ex12_5 with correct level-2 overlap
DMLabel: Add missing cleanup for DMLabelGather()
Plex ex12: Fixed variable initialization and some output
Plex ex11: Added error checking
Plex ex14: Now boundary label does not have cells
Plex ex1: Now boundary label does not have cells
Plex ex1: Fix for VTK format
added some debugging code, getting ready to branch
added some print statements, should be an -info...
smome cleaning up
restructured ex11 to allow for problem specific BCs
DMPlex: Update test ex12_5 with correct level-2 overlap
DMPlex: Use global processSF in DMPlexPartitionInvert
DMPlex: Add remote leaf contributions to roots in DMLabelPropagate
DMPlex: Add DMLabelGather to migrate label values from leafs to roots
DMPlex: Refactor DMLabelDistribute to separate point stratum distribution
DMPlex: Add propagation of remote point donations for multi-level overlap
DMPlex: Fix DMLabelDistribute for all-to-all migrations
Plex: make extern exactly match prototype: semantic match is not enough.
DMP4est: typo fix
...
show more ...
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| #
af25d912
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| 06-Mar-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts:
src/ksp/pc/impls/bddc/bddc.c
src/ksp/pc/impls/bddc/bddcgraph.c
src/ksp/pc/impls/bddc/bddcprivate.c
src/ksp/pc/imp
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts:
src/ksp/pc/impls/bddc/bddc.c
src/ksp/pc/impls/bddc/bddcgraph.c
src/ksp/pc/impls/bddc/bddcprivate.c
src/ksp/pc/impls/bddc/bddcscalingbasic.c
src/ksp/pc/impls/bddc/bddcschurs.c
src/mat/impls/is/matis.c
show more ...
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| #
77d236df
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| 01-Mar-2016 |
Michael Lange <michael.lange@imperial.ac.uk> |
Merge branch 'tisaac/dmforest' into mlange/fix-plex-multi-level-overlap
Conflicts:
src/dm/impls/plex/examples/tests/output/ex12_5.out
src/dm/label/dmlabel.c
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| #
f37e7628
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| 21-Feb-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcfieldsplit-logevent
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| #
f844c764
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| 19-Feb-2016 |
Mark Adams <cal2princeton@yahoo.com> |
Merge branch 'tisaac/dmforest' of bitbucket.org:petsc/petsc into tisaac/dmforest
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| #
092e5057
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| 17-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: add and remove cells before inserting boundary values
Bound to be inefficient, but keeps cells from polluting refinements of
the label in refined meshes.
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| #
31620726
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| 16-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: fix bad dereference in DMPlexAnchorsModifyMat()
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| #
46bdb399
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| 15-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
WIP: DMPlexCreateInterpolatorTree()
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| #
6ecaa68a
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| 13-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
WIP: DMPlexComputeInterpolatorTree()
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| #
efe440bf
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| 12-Feb-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: The CoordinateDM should not have constraints
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| #
19f70fd5
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| 10-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlexAnchorsModifyMat(): fix bad access after loop
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| #
4b2f2278
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| 10-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlexAnchorsModifyMat(): compress out empty points
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| #
a9096520
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| 10-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: correct counting in indicesPointField_internal
I think it was offseting for constraints even when setBC = PETSC_TRUE,
which it shouldn't do.
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| #
bdd6f66a
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| 07-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: try to handle boundary conditions early
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| #
38318d23
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| 03-Feb-2016 |
Mark Adams <cal2princeton@yahoo.com> |
Merge branch 'tisaac/dmforest' of bitbucket.org:petsc/petsc into tisaac/dmforest
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| #
f19733c5
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| 02-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: fix bad indexing in anchors calculations
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| #
719ab38c
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| 02-Feb-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Plex: copy field components when creating constraint section
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| #
2e17dfb7
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| 01-Feb-2016 |
Matthew G. Knepley <knepley@gmail.com> |
DM: Promote DMPlexLocalizeCoordinates --> DMLocalize coordinates
- There is one small problem here in that the iteration still needs Plex-like things. This will be rewritten to use a projection rathe
DM: Promote DMPlexLocalizeCoordinates --> DMLocalize coordinates
- There is one small problem here in that the iteration still needs Plex-like things. This will be rewritten to use a projection rather than Plex, but right now we need it for the magma presentation.
show more ...
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| #
f44c6289
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| 28-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcreset-hypre-for-master
Needed to move PCDestroy_HYPRE() added to master to PCReset_HYPRE() since that was introduced
as a bug fix for maint
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| #
d2a29c01
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| 14-Jan-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge remote-tracking branch 'origin/tisaac/dm-label-promote'
* origin/tisaac/dm-label-promote:
snes tutorial ex69: give mesh a name for regression purposes
DM: make DMLabel labels a part of all
Merge remote-tracking branch 'origin/tisaac/dm-label-promote'
* origin/tisaac/dm-label-promote:
snes tutorial ex69: give mesh a name for regression purposes
DM: make DMLabel labels a part of all DMs
builder: update regression tests
builder: update some missing package requirements
DM: set coordinate vector name
ts tutorials ex11_sa: make it compile
Conflicts:
src/dm/impls/plex/plexcreate.c
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| #
dce90f5d
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| 26-Dec-2015 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into tisaac/dmforest
* master: (177 commits)
DT ex3: The test should check the number of digits requested
DT ex3: One test fails in single precision
Plex: Do not automati
Merge branch 'master' into tisaac/dmforest
* master: (177 commits)
DT ex3: The test should check the number of digits requested
DT ex3: One test fails in single precision
Plex: Do not automatically create a default section if no fields are defined
Plex: DMPlexCopyCoordinates() needs to create the coordinate section if it is missing
superlu: no longer requires xerbla slamch dlamch ?
superlu: update to v5.1
skip MatSolve() if matrix factorization fails
replacing SETERRQ with error output info and continue execution
SNES ex12: Added parallel tests - These test parallel, unstructured interpolation/restriction using FAS
Plex+SNES: Now in DMPlexComputeJacobian_Internal(), we also form the Jacobian preconditioner matrix
FE: Now we can form either the Jacobian or the Jacobian preconditioned matrix using a flag
DS: Now have point wise function slots for the Jacobian preconditioned matrix - This will allow us to form the "right" operator for preconditioning, like M in the (2,2) block for Stokes
Plex: When swapping Plexes, also swap point SF
Plex: Fix parallel error in Injector
Mat+Plex: Added MatPreallocator which can be called with MatSetValues() and preallocates another Mat - This could have been another "mode" of Mat, but I thought this was cleaner - Use MatPreallocator to preallocator Plex interpolators
DT ex3: Change tolerance and eliminate tests which need MPFR from regular runs
superlu: fix complex build
superlu: update to using 5.0 tarball with the fix for -Werror=format-security
superlu: update to use tarball with -Werror=format-security fix
DM: Clone the coordinate DM instead of reusing in Clone()
...
Conflicts:
config/builder.py
src/dm/impls/plex/plexcreate.c
show more ...
|
| #
400c169c
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| 26-Dec-2015 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-jacp'
* knepley/feature-plex-jacp:
Plex: Do not automatically create a default section if no fields are defined
Plex: DMPlexCopyCoordinates() needs to create t
Merge branch 'knepley/feature-plex-jacp'
* knepley/feature-plex-jacp:
Plex: Do not automatically create a default section if no fields are defined
Plex: DMPlexCopyCoordinates() needs to create the coordinate section if it is missing
SNES ex12: Added parallel tests - These test parallel, unstructured interpolation/restriction using FAS
Plex+SNES: Now in DMPlexComputeJacobian_Internal(), we also form the Jacobian preconditioner matrix
FE: Now we can form either the Jacobian or the Jacobian preconditioned matrix using a flag
DS: Now have point wise function slots for the Jacobian preconditioned matrix - This will allow us to form the "right" operator for preconditioning, like M in the (2,2) block for Stokes
Plex: When swapping Plexes, also swap point SF
Plex: Fix parallel error in Injector
Mat+Plex: Added MatPreallocator which can be called with MatSetValues() and preallocates another Mat - This could have been another "mode" of Mat, but I thought this was cleaner - Use MatPreallocator to preallocator Plex interpolators
show more ...
|