Merge branch 'jeremy/libceed' into 'main'

Expand libCEED + DMPlex Restriction support

See merge request petsc/petsc!4701

Expand libCEED + DMPlex Restriction support

Merge branch 'jacobf/2021-12-09/attribute-format-mat' into 'main'

Feature: Attribute Format - Mat

See merge request petsc/petsc!4634

Merge branch 'knepley/feature-plex-multiple-hybrid' into 'main'

DM+FE: Allow multiple cohesive fields

See merge request petsc/petsc!4616

DM+FE: Allow multiple cohesive fields
- Changed name from "hybrid" cell to "cohesive" cell
- Fixed check for cohesive field in PetscFE and DM
- Fixed DMCreateDS() for new scheme
- Added PetscDSIsCohe

DM+FE: Allow multiple cohesive fields
- Changed name from "hybrid" cell to "cohesive" cell
- Fixed check for cohesive field in PetscFE and DM
- Fixed DMCreateDS() for new scheme
- Added PetscDSIsCohesive() and PetscDSGetNumCohesive()
- Replaced PetscDSGetHybrid() with PetscDSGetCohesive() and
PetscDSSetHybrid() with PetscDSSetCohesive()
- Added PetscDSGetFieldOffsetCohesive()
- Fixed hybrid Jacobian integration
- Hybrid Jacobian integration needs to know the side of the interface, just like residual integration
- Needs to use cohesive field offsets
- Update takes the side as an argument

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remove trailing newline from SETERRQ

Merge branch 'haplav/fix-dmlabelcompare-collectiveness' into 'main'

make DMCompareLabels and DMLabelCompare really collective

See merge request petsc/petsc!4691

make DMCompareLabels,DMLabelCompare really collective

Merge remote-tracking branch 'origin/release'

Merge branch 'knepley/fix-dm-composite-clone' into 'release'

Knepley/fix dm composite clone

See merge request petsc/petsc!4617

DM: Do not update DS with a negative dim

Merge branch 'jwallwork23/mmg-trim' into 'main'

Plex interface for Mmg and ParMmg

See merge request petsc/petsc!4431

DM: Take over management of mesh generators and adaptors from DMPlex
- Change adaptLabel signature to match adaptMetric
- Move mesh generator list from DMPlex to DM
- DMAdaptLabel() and DMAdaptMetric

DM: Take over management of mesh generators and adaptors from DMPlex
- Change adaptLabel signature to match adaptMetric
- Move mesh generator list from DMPlex to DM
- DMAdaptLabel() and DMAdaptMetric() now check this list
- Register metric adaptation packages
- Change -dm_plex_generator to -dm_generator
- Change -dm_plex_adaptor to -dm_adaptor

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Merge branch 'ksagiyam/dmplex_path_change' into 'main'

Ksagiyam/dmplex path change

Closes #956 and #896

See merge request petsc/petsc!4441

plexhdf5: Introduce storage versioning and version 2.0.0;

* introduce DMPlexStorageVersion x.y.z
* if no version specified in file => 1.0.0
[original version before the project - that in petsc rel

plexhdf5: Introduce storage versioning and version 2.0.0;

* introduce DMPlexStorageVersion x.y.z
* if no version specified in file => 1.0.0
[original version before the project - that in petsc release 3.16.0]
* check version in both file and option -dm_plex_view_hdf5_storage_version
* version 2.0.0 changes paths to topology, labels, coordinates
* support both versions 1.0.0 and 2.0.0 for writing
* use sizeof in PetscSNPrintf() calls

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plex: DMPlex needs to be named before calling DM{View, Load}()

DMPlexCreateFromFile() takes mesh name as argument

Merge branch 'rmills/feature-dm-bind-below' into 'main'

Rmills/feature dm bind below

See merge request petsc/petsc!3455

Add Vec/MatGetBindingPropagates().

DMCreateInterpolationScale() now propagates the bindingpropagates flag.

DMCreateInterpolationScale() now honors bindingpropagates flag of 'fine' vector.

Bind matrix in DMCreateInterpolationScale() to CPU if the vector is bound.

Propagate the dm->bind_below setting from parent in DMCoarsen().

Add -dm_bind_below option to allow user-specified size threshold below which GPU is not used for Vec and Mat objects associated with a DM.

This is currently only implemented for DMDA.

Thanks-to: Ju

Add -dm_bind_below option to allow user-specified size threshold below which GPU is not used for Vec and Mat objects associated with a DM.

This is currently only implemented for DMDA.

Thanks-to: Junchao Zhang <jczhang@mcs.anl.gov>

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Merge branch 'knepley/fix-plex-reorder' into 'main'

Plex: Reordering should not create a section

See merge request petsc/petsc!4504

Plex: Automatically reorder mesh during creation
- Uses -dm_plex_reorder