| #
72d2a954
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| 16-Dec-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'knepley/fix-dmplex-fortran' [PR #1277]
* knepley/fix-dmplex-fortran:
Doc: Fix spelling of DMLabelGetNumValues
Plex: Add PetscPartitioner to Fortran list
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| #
df813f42
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| 14-Dec-2018 |
Matthew G. Knepley <knepley@gmail.com> |
Doc: Fix spelling
Suggested-by: Manuel Colera Rico <m.colera@upm.es>
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| #
34d8b122
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| 09-Dec-2018 |
Patrick Farrell <patrick@pefarrell.org> |
Merge branch 'master' into knepley/feature-snes-patch
Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCo
Merge branch 'master' into knepley/feature-snes-patch
Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCompositeType), and I don't know how to fix it.
show more ...
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| #
f35fe2a5
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| 06-Dec-2018 |
Joseph Pusztay <josephpu@buffalo.edu> |
Merged petsc/petsc into master
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| #
83c10b7e
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| 04-Dec-2018 |
Pierre Jolivet <pierre.jolivet@enseeiht.fr> |
Merged petsc/petsc into master
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| #
c0f00074
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| 30-Nov-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'stefano_zampini/fix-p4est-squashed' [PR #1229]
* stefano_zampini/fix-p4est-squashed:
Few fixes to the p4est/p8est implementations of DMForest.
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| #
33907cc2
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| 11-Nov-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
DM: fix interface for DMSet{Point|Default}SF to accept NULL
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| #
8f700142
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| 04-Nov-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
DMGetCoordinatesLocalized(): the presence of the localized coordinates should be independent of the periodicity!
Added DMGetCoordinatesLocalizedLocal() and few minor fixes to the docs
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| #
e8ecbf3f
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| 14-Nov-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
DMBoundary: temporary fix to plex section boundary issue
DMPlexCreateSection isn't handling the case where
there are more dofs than components on a point properly.
There seems to be an ad hoc API th
DMBoundary: temporary fix to plex section boundary issue
DMPlexCreateSection isn't handling the case where
there are more dofs than components on a point properly.
There seems to be an ad hoc API that if you pass numcomps == 0
to DMAddBoundary, it constraints all components. That's not good, but
I documented it and it avoided the plex problem until we can fix it.
show more ...
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| #
308f8a94
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| 11-Nov-2018 |
Toby Isaac <tisaac@cc.gatech.edu> |
DMGetCoordinateDM: protect against memory leak
If you call DMGetCoordinateDM() before DMSetUp(),
DMP4est creates the coordinatedm and places it in
dm->coordinateDM during a call to
DMCreateCoordinat
DMGetCoordinateDM: protect against memory leak
If you call DMGetCoordinateDM() before DMSetUp(),
DMP4est creates the coordinatedm and places it in
dm->coordinateDM during a call to
DMCreateCoordinateDM() to fill dm->coordinateDM.
Added a redundant looking DMDestroy() to protect against
this, fixing a memory leak (and snes ex12 examples in the process).
show more ...
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| #
072d7d67
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| 01-Nov-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
DMSetPeriodicity: fix bug
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| #
c7d20fa0
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| 06-Nov-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
DMCreateInterpolation: prevent from segfaults
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| #
367003a6
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| 28-Oct-2018 |
Stefano Zampini <stefano.zampini@gmail.com> |
minor fixes
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| #
1ab378fc
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| 22-Nov-2018 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Merge branch 'master' into haplav/feature-mataij-load-from-hdf5
because I need the test loop fix
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| #
28e96ad3
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| 16-Nov-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'haplav/fix-plex-interpolate-interface-cones' [PR #1227]
* haplav/fix-plex-interpolate-interface-cones:
DMPlexIntepolate: fix orientation of faces in interface
Fixes orientation of face
Merge branch 'haplav/fix-plex-interpolate-interface-cones' [PR #1227]
* haplav/fix-plex-interpolate-interface-cones:
DMPlexIntepolate: fix orientation of faces in interface
Fixes orientation of faces in interface (i.e. order and orientations of the corresponding cones) so that they conform across ranks.
show more ...
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| #
ad9ac99d
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| 09-Nov-2018 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
DMGetCoordinatesLocalTuple: fix leak that hadn't manifested itself before
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| #
0b7531cb
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| 27-Oct-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'haplav/feature-dmplex-check-interface-cone-conformance' [PR #1164]
* haplav/feature-dmplex-check-interface-cone-conformance:
DMPlex: check for interface cone conformance
New DMPlexChec
Merge branch 'haplav/feature-dmplex-check-interface-cone-conformance' [PR #1164]
* haplav/feature-dmplex-check-interface-cone-conformance:
DMPlex: check for interface cone conformance
New DMPlexCheckConesConformOnInterfaces() checks that cones of points on inter-partition interfaces have conforming order.
This check is now called in DMPlex test ex18.c. To reproduce the failed check, one can remove requires: TODO from tests.
This merge also adds DMGetCoordinatesLocalSetUp() and DMGetCoordinatesLocalNoncollective() as I needed a non-collective version of DMGetCoordinatesLocal(), and fixes several notes on collectiveness in DMPlex documention.
show more ...
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| #
ddf8437d
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| 26-Oct-2018 |
Matthew G. Knepley <knepley@gmail.com> |
DM: DMClone() must copy level information
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| #
a5a49157
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| 25-Oct-2018 |
Joseph Pusztay <josephpusztay@Josephs-MacBook-Pro.local> |
Merge branch 'master' into jpusztay/feature-swarm-symplectic-example
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| #
e901d7f7
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| 25-Oct-2018 |
Joseph Pusztay <josephpusztay@Josephs-MacBook-Pro.local> |
Merge branch 'master' into jpustay/feature-swarm-example
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| #
baeaa64e
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| 25-Oct-2018 |
Joseph Pusztay <josephpu@buffalo.edu> |
Merged petsc/petsc into master
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| #
df90af56
|
| 24-Oct-2018 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into arcowie-rem/feature-error-logging
* master: (393 commits)
Bib: Update reference
Mat: Doc fix
Bib: Updated ref
PetscDS: Doc fixes
PC+LU: Do not try to refactor an
Merge branch 'master' into arcowie-rem/feature-error-logging
* master: (393 commits)
Bib: Update reference
Mat: Doc fix
Bib: Updated ref
PetscDS: Doc fixes
PC+LU: Do not try to refactor an already factored matrix
Mat: Small fix for checking and docs
Mat: Added MatSetFactorType() - Needed it when making a shell matrix look factored
PetscDS: Added PetscDSUpdateBoundary() - Lets the user change the boundary condition
single precision produces different convergence history
p4est: has a dependency on zlib - so handle it correctly
Add -mat_mffd_complex to use the Lyness complex number trick to compute J_u * v instead of differencing.
Replace VecWAXPY by VecAXPY if needed
Revert "Replace VecWAXPY by VecAXPY if needed"
Replace VecWAXPY by VecAXPY if needed
MatHermitianTransposeGetMat and MatCreateVecs
ex19: Updated test filter to avoid false positives.
DM: Improved Global-To-Natural docs Suggested-by: Josh L <ysjosh.lo@gmail.com>
Do not build shared openblas when doing static build
Upgrade OpenBLAS to 0.3.3
test: add alt output file for changes in OSX-10.14 and Xcode-10.0 [perhaps related to ML]
...
Conflicts:
src/vec/is/utils/vsectionis.c
show more ...
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| #
632bab2b
|
| 24-Oct-2018 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
DMGetCoordinatesLocalSetUp: don't create default section - it was not a good idea
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| #
550e16e9
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| 22-Oct-2018 |
Pierre Jolivet <pierre.jolivet@enseeiht.fr> |
Merged petsc/petsc into master
|
| #
b34f0398
|
| 21-Oct-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'knepley/fix-dm-naturaltoglobal-doc' [PR #1186]
* knepley/fix-dm-naturaltoglobal-doc:
DM: Improved Global-To-Natural docs
Suggested-by: Josh L <ysjosh.lo@gmail.com>
|