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7937d9ce
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| 04-Dec-2015 |
Michael Lange <michael.lange@imperial.ac.uk> |
DMPlex: Add DMLabelGather to migrate label values from leafs to roots
This is effectively the inverse operation to DMLabelDistribute and it reuses the underlying migration stratum value code.
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26c55118
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| 04-Dec-2015 |
Michael Lange <michael.lange@imperial.ac.uk> |
DMPlex: Refactor DMLabelDistribute to separate point stratum distribution
This separates the point-wise stratum migration from the generation of the target label, so that this may be reused in other
DMPlex: Refactor DMLabelDistribute to separate point stratum distribution
This separates the point-wise stratum migration from the generation of the target label, so that this may be reused in other methods.
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5cbdf6fc
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| 27-Nov-2015 |
Michael Lange <michael.lange@imperial.ac.uk> |
DMPlex: Fix DMLabelDistribute for all-to-all migrations
Previously, indices into the `stratumValue` array were send over the SF for each point, which is wrong if `stratumValue` differs across proces
DMPlex: Fix DMLabelDistribute for all-to-all migrations
Previously, indices into the `stratumValue` array were send over the SF for each point, which is wrong if `stratumValue` differs across processes. Instead, we now send stratum values per point and infer the local `stratumValue` array on the receiver through hashing.
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f37e7628
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| 21-Feb-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcfieldsplit-logevent
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f44c6289
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| 28-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcreset-hypre-for-master
Needed to move PCDestroy_HYPRE() added to master to PCReset_HYPRE() since that was introduced as a bug fix for maint
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d2a29c01
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| 14-Jan-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge remote-tracking branch 'origin/tisaac/dm-label-promote'
* origin/tisaac/dm-label-promote: snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part of all
Merge remote-tracking branch 'origin/tisaac/dm-label-promote'
* origin/tisaac/dm-label-promote: snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part of all DMs builder: update regression tests builder: update some missing package requirements DM: set coordinate vector name ts tutorials ex11_sa: make it compile
Conflicts: src/dm/impls/plex/plexcreate.c
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8c22c10a
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| 08-Jan-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into tisaac/dmforest
* master: (143 commits) Revert "revolve: c++ compile fix" - as revolve now does not require 'bool' anymore revolve: c++ compile fix revolve: enable t
Merge branch 'master' into tisaac/dmforest
* master: (143 commits) Revert "revolve: c++ compile fix" - as revolve now does not require 'bool' anymore revolve: c++ compile fix revolve: enable tests and add to nightlybuilds fix download url for revolve remove outdated unused script removed outdated use of the term petsc-dev for the development version of PETSc streams: precompute NPMAX - and use this value. And now user can use it optionally as: mpich: default to using ver 3.2 on OSX/ElCapitan as 3.1.3 does not build on Barry's laptop Revert "mpich: update version to mpich-3.2" superlu/dist: disable build on freebsd - as this test is with bsdmake [and superlu requires gnumake] superlu/dist: enable in complex nightly builds fortran: fix typo with MATSEQAIJRESTOREARRAYF90 Documentation for Dense and SeqAIJ Get/RestoreArrayf90 had incorrect dimensions Docs for MatGetRowIJF90() cut and paste and never fixed Bib: NPC refs superlu: no longer requires xerbla slamch dlamch ? $ nm -Ao libsuperlu_dist_4.3.a |egrep \(xerbla\|slamch\|dlamch\) superlu_dist: update to version 4.3 Bib: More of our refs added whitespaces to align numbers in verbatim environment Added verbatim environment to special tokens ...
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5aa44df4
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| 09-Dec-2015 |
Toby Isaac <tisaac@uchicago.edu> |
DMLabel: enable explicit control over default label values.
It seemed strange to me that DMLabelGetValue() had a default value that means not set, but that DMLabelSetValue() could set a label to hav
DMLabel: enable explicit control over default label values.
It seemed strange to me that DMLabelGetValue() had a default value that means not set, but that DMLabelSetValue() could set a label to have this value. So now, DMLabelSetValue() will ignore attempts to set a value to the default value, but the user can change what the default value is.
DMLabel: fix DMLabelDistribute()
The recently added default value was not transfered properly, and was accessed by the wrong processes.
typo fix
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2a61db43
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| 08-Nov-2015 |
Toby Isaac <tisaac@uchicago.edu> |
Merge branch 'tisaac/dm-label-promote' into tisaac/dmforest
* tisaac/dm-label-promote: (319 commits) snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part o
Merge branch 'tisaac/dm-label-promote' into tisaac/dmforest
* tisaac/dm-label-promote: (319 commits) snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part of all DMs builder: update regression tests builder: update some missing package requirements DM: set coordinate vector name ts tutorials ex11_sa: make it compile mark variable as unused so compiler doesn't warn about unused value configure: use 'git cat-file -e' to check for existance of a commit in localrepo. ['git rev-parse' does not give error for a hash thats not in repo] petsc4py: revert to manually syncing petsc4py with petsc master changes configure: revert gitcommit default value to Null. If a pacakge using giturl does not change this value - raise an error fix: revert change in a44bcdf that breaks with pgf90 update test output for fixed to hypre interface that now actually pass the interp vectors to BoomerAMG Error message should say use negative threshold value to prevent filtering out zeros Calls to HYPRE_BoomerAMGSetInterpVectors() did not actually copy the vector data pointer from the PETSc vector to the hypre vector thus resulting in the hypre interp vectors being identically zero and hence not affecting the quality of the AMG hierarchy produced/ DMPlex: Silence overzealous compiler warnings add row/col orientation to MatConvert_Elemental_Dense fix formatting error in previous commit [broke nightlybuilds] fix formating of TSTHETA manual page and add missing command line option run hwloc with MPIEXEC and binding so it runs on the correct machine fix: memory leaks [in valgrind test] ...
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c58f1c22
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| 06-Nov-2015 |
Toby Isaac <tisaac@uchicago.edu> |
DM: make DMLabel labels a part of all DMs
Most DMLabel routines do not depend on the internals of DMPlex, and I want to reuse them in other DM types
DM: puth depthLabel in DM
I know that this is s
DM: make DMLabel labels a part of all DMs
Most DMLabel routines do not depend on the internals of DMPlex, and I want to reuse them in other DM types
DM: puth depthLabel in DM
I know that this is something that's only used by plex, but I'm not sure how else to do this.
DM: move MarkBoundaryFaces back to plex
DM: add reference counting to label linked list for cloning purposes
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