| #
efd4aadf
|
| 30-Apr-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Make ASCII PC/KSP/SNES/TSView() code and output in a standard style
The code that prints the ASCII view for solvers was occasionally inconsistent: 1) TSView printed the type specific information aft
Make ASCII PC/KSP/SNES/TSView() code and output in a standard style
The code that prints the ASCII view for solvers was occasionally inconsistent: 1) TSView printed the type specific information after the general info while all other solvers printed it before (right after the name of the type is printed) 2) KSPView consistently printed the name of the subtype on EACH line of the subtypes output as did a few of the PC and SNES viewers. Since they are all printed indented directly below the subtype name there is no reason to print this information on each line 3) TSView printed output about number of linear solvers and SNES even for explicit methods, which is goofy. 4) a few other minor formatting and consistency issues where fix.
Commit-type: style-fix, feature Time: 16 hours
show more ...
|
| #
ec14d8c8
|
| 27-May-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-sphere-mesh
* master: (2633 commits) Bib: Added ref SNES ex56: Update test output add a citation to petsc.bib Plex: Initialize variables ini
Merge branch 'master' into knepley/feature-plex-sphere-mesh
* master: (2633 commits) Bib: Added ref SNES ex56: Update test output add a citation to petsc.bib Plex: Initialize variables initialize ap as complained by the nightly tests Plex ex3: Update to new point function API initialize some variables as complained by nightly tests SNES ex12: Mix misnaming Nf --> Nc update tests add tests add MatView_SeqXAIJ_ASCII_structonly(); enable A->structure_only in MatSetValuesBlocked_SeqBAIJ typo fill-in some references Bib: Fixed ref Plex: Added PLY to file support Plex: Adding PLY support PetscDS: Turn off Fortran bindings for Constants Plex tests: Updated to new point function API SNES ex56: Moved tests to new format DM: Allow field projection functions to take an array of scalars - This will allow us to pass in user data to kernels without void *, more efficiency than aux fields ...
Conflicts: config/builder.py include/petscdmplex.h src/dm/impls/plex/examples/tests/ex1.c src/dm/impls/plex/plexcreate.c src/dm/impls/plex/plexgmsh.c src/snes/examples/tutorials/ex63.c
show more ...
|
| #
c90b701e
|
| 14-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits) Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits) Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes add help menu for MatCreateSubMatricesMPI() rename struct Mat_SubMat -> Mat_SubSppt add a little information to the manual about using tchem rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual need to protect the \ passed on the makefile on my Mac Bib: Updated ref update src/mat/examples/tests/output/ex23_#.out rename MatGetSubMat -> MatCreateSubMat Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES superlu: libray is installed in PREFIX/lib64 - fix this to use PREFIX/lib backport fixes cc105cc3 2b35c90a - required for 3bf428d - that was backported from master - 80c96bb 'echo -n' fails on opensolaris/osx - so avoid using it. fix diffs in nightlybuilds due to options in ~/.petscrc add Kelley03 to src/docs/tex/petsc.bib build: determine moudles, mpi.h used during buildtime and print in 'info' fix analyzer warnings fix build failure on opensolaris - where -lm from flibs is removed due to -lm in cxxlibs. But then - only flib gets used for some configure tests [blaslapack, parms] config: prefer __restrict over C99 restrict keyword ...
show more ...
|
| #
cffa9059
|
| 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits) Plex: Fix overeager protection of function Travis-CI: Attempt to solve issues with gfortran Travis-CI: Use newe
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits) Plex: Fix overeager protection of function Travis-CI: Attempt to solve issues with gfortran Travis-CI: Use newer macOS image clarify damping and other issues related to SNESLINESEARCHBASIC change example in new harness to use simple partitioner so gets consistent output on all systems remove unused function from test file cleanup formatting in example, plus myrank not rank missing - makes the manual page formatting wrong The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank? fix typo and cut and paste error in docs bugfix for !HYPRE fix warning for ';;' may switch to scalable only when B->cmap->N > 100000 MatLRC: store in the context the parallel matrices rather than the sequential ones Bib: Add ref set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ() Error in VecScatterView_MPI() had the meaning of from and to backwards fix build warning as reported by the nightly tests Update alquimia.py to use Glenn's branch that updates alquimia for pflotran xsdk fix divide by zero exposed by 8534686b5096cd4c91a8f3895408b386c0628431 - and produced by petsc4py testsuite ...
Conflicts: src/dm/impls/plex/examples/tests/ex13.c src/dm/impls/plex/plexgmsh.c src/snes/examples/tests/ex2.c src/snes/examples/tests/output/ex2_3.out src/snes/examples/tests/output/ex2_4.out src/snes/examples/tests/output/ex2_5.out
show more ...
|
| #
0d0f1ffd
|
| 08-Feb-2017 |
Scott Kruger <scott.e.kruger@gmail.com> |
Merge branch 'master' into scott/test-harness-forloopfix
|
| #
c231f9e3
|
| 01-Feb-2017 |
BarryFSmith <bsmith@mcs.anl.gov> |
Fixed documentation for -pc_hypre_boomeramg_rtol should be _tol
Issue #154 Reported by: J. W. Peterson
|
| #
fdc853ad
|
| 17-Jan-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-plex-examples-cleanup
* master: (24 commits) Bib: Added ref shorten a url remove the outdated paragraph on Eclipse instructions Docs: manual - copyedit
Merge branch 'master' into knepley/fix-plex-examples-cleanup
* master: (24 commits) Bib: Added ref shorten a url remove the outdated paragraph on Eclipse instructions Docs: manual - copyedit for @caidao22 's update I missed a n -> ierr changed needed in one of the error macros Fix Fortran SETERRQ() to new calling sequence when compiled with no error checking minor modifications for the added text add Eclipse instructions to manual PCHYPRE: add block nodal interpolations from command line customization Plex: Now DMPlexGetRedundantDM() has more sensible behavior on 1 proc SNES tutorial ex5s: fix typo ("parallism") DMDA: fix typo in error messages ("parallism") Plex: Drawing Vecs now works for multiple fields and components SNES ex69: Started mantle test SNES ex69: Fixed test SNES ex69: Started a composite viscostiy test SNES ex69: Updated BC specification SNES ex69: Must use -pc_use_amat with FieldSplit Plex+Draw: Improve viewer - Nice title - Allow override of min/max scale - Allow P0 and P1 (just quick and dirty) Plex+VTK: Set boundary values with the time specified by the OutputSequence number ...
show more ...
|
| #
910793af
|
| 16-Jan-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'stefano_zampini/feature-hypre-block-interp'
|
| #
e2287abb
|
| 13-Jan-2017 |
Stefano Zampini <stefano.zampini@gmail.com> |
PCHYPRE: add block nodal interpolations from command line customization
|
| #
9137bce6
|
| 24-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/remove-funct'
|
| #
fbfcfee5
|
| 19-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-t
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-to: Andreas Mang <andreas@ices.utexas.edu>
show more ...
|
| #
61393a82
|
| 26-Nov-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'stefano_zampini/feature-mathypre'
|
| #
58968eb6
|
| 07-Nov-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
MatHYPRE/VecHypre: clean up and fix header files
|
| #
5ac14e1c
|
| 06-Nov-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
PCHYPRE: use Mat instead of IJMatrix
move the customization of AMS and ADS at SetUp time
|
| #
49a781f5
|
| 05-Nov-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
PCHYPRE: use internal Mat of type MatHYPRE
hpmat already stores two HYPRE vectors
|
| #
54761ea3
|
| 14-Aug-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/fix-successful-numerical-factorization-after-failure/master
The maint patch for the given problem cannot merge cleanly into next due to changes in the same code in m
Merge branch 'master' into barry/fix-successful-numerical-factorization-after-failure/master
The maint patch for the given problem cannot merge cleanly into next due to changes in the same code in master (the introduction of MatFactorGetError()) therefor need to merge in master and use the new construct before merging to next
show more ...
|
| #
162a9882
|
| 11-Aug-2016 |
Patrick Sanan <patrick.sanan@gmail.com> |
Merge branch 'master' into psanan/pc-telescope-nearnullspace
|
| #
3d996552
|
| 19-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcfetidp.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c src/mat/impls/is/matis.h
show more ...
|
| #
c03b0cd2
|
| 07-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'stefano_zampini/hypre-ams-zerointerior-feature'
|
| #
af25d912
|
| 06-Mar-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/imp
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcscalingbasic.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c
show more ...
|
| #
f37e7628
|
| 21-Feb-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcfieldsplit-logevent
|
| #
e8618254
|
| 05-Feb-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/downloads
|
| #
38318d23
|
| 03-Feb-2016 |
Mark Adams <cal2princeton@yahoo.com> |
Merge branch 'tisaac/dmforest' of bitbucket.org:petsc/petsc into tisaac/dmforest
|
| #
10725b64
|
| 02-Feb-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into tisaac/dmforest
* master: (136 commits) Make error message specific to exactly what matrix is supported Prevent fblaslapack or f2cblaslapack from being compiled with t
Merge branch 'master' into tisaac/dmforest
* master: (136 commits) Make error message specific to exactly what matrix is supported Prevent fblaslapack or f2cblaslapack from being compiled with the -no-prec-dev Intel compiler option since it can produce incorrect results Fix for PCReset_HYPRE to make it reentrant. replace default superlu_dist '-mat_superlu_dist_colperm METIS_AT_PLUS_A' with MMD_ATA to avoid different random numbers for nightly tests fixes for merge from maint patch Added PCReset_HYPRE() so it may be used with SNESVI solvers remove Microsoft compiler message for paste macros used for handling Blas/Lapack macro name mangling for example Increase the number of PetscViewerPushFormat() possible to 25 and use a macro PETSCVIEWERFORMATPUSHESMAX for the value Configure: Remove redundant logging Bib: Added ref nightlybuids: fix permissions of script MatRegisterDestroy() does not exist but it is listed in manual pages externalpackages-git: save local changes if any - in git stash - before 'git checkout -f' Useful incase --with-package-commit=HEAD option was msissing [perhaps due to a typo] nightlybuilds: add xsdk builds Add architectures for testing xsdk package downloads (Trilinos, Hypre, SuperLU) create another version of TurnForward() for adaptive time stepping specifically Configure: Give proper default if HOME is missing from the environment fix abbreviation allow zeropivot for MatSOR_SeqAIJ_Inode, node size=1 add test case using adpative time stepping for checkpointing type 'NONE' ...
show more ...
|
| #
55bf2da2
|
| 31-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/add-pcreset-hypre-for-master'
|