| #
618cbb4a
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| 12-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
rename MatCreateSubMatrix_MPIAIJ_Private() -> MatCreateSubMatrix_MPIAIJ_nonscalable()
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| #
bcae8d28
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| 12-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
using a scalable iscol_sub and iscmap now
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| #
040216a4
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| 12-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
add ISGetSeqIS_SameDist_Private()
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| #
64efcef9
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| 12-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
iscmap is correct now
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| #
8b3fa1f7
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| 11-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
create scalable iscol_sub; iscmap is not done yet!
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| #
8f69fa7b
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| 11-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
reuse submat does not need to call MPIU_Allreduce() anymore
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| #
3782ecc7
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| 11-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
add MatCreateSubMatrix_MPIAIJ_SameDist() to handle case of samedist
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| #
98b658c4
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| 10-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
MatCreateSubMatrix_MPIAIJ_Private_SameDist() reuses Msub,iscol_sub and iscmap
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| #
15b2185c
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| 10-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
rm Mreuse
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| #
62be2347
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| 14-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
MatCreateSubMatrix_MPIAIJ_Private_SameDist() works now
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| #
df40acb1
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| 07-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
MatCreateSubMatrix_MPIAIJ_Private() delegates to a new subroutine XXX_sameDist when isrow has same distribution as mat
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| #
548ecf4d
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| 05-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
cmap is correct now
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| #
8d2139bd
|
| 14-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
start implement new MatCreateSubMatrix_MPIAIJ_Private() to avoid using global size ctable
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| #
ef514586
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| 14-Apr-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
investigate ctable and MatCreateSubMat
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| #
8bee6947
|
| 30-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (108 commits)
Bib: Added ref
Bib: Updated reference
Bib: Updated reference
Work around problems with Apple Xcode 8.3 and h
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (108 commits)
Bib: Added ref
Bib: Updated reference
Bib: Updated reference
Work around problems with Apple Xcode 8.3 and handling of rpath argument with gfortran
help menu update for MatCreateSubMatrices() Reported-by: Brad Aagaard <baagaard@usgs.gov>
fix flops for PCApply_PBJacobi_1 and PCApply_PBJacobi_7 Reported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr>
TSRK: Fix FSAL optimization to not skip update and check or stages.
Travis-CI: Workaround too long TMPDIR in macOS with Open MPI
test: Fix type mismatch in KSP test.
test: Fix warnings from gfortran -Wconversion (OS X, Homebrew build)
MPIUNI: Silence GCC -Wconversion warnings
Fortran: Add error checking for incorrect PETSC_NULL_XXX argument when expecting function
fix test output per changes in 517c9301b2e9239931bfd644803fd6bb859387ea
MUMPS: update to version 5.1.1 with opensolaris compile fixes
TSRK: Mention 5BS in the changelog.
TSRK: Mention the new 5BS scheme in the manual.
fix 'unused variable' warning
Remove unused code
added hbw_realloc
fixed undefined ptr
...
Conflicts:
config/BuildSystem/config/packages/med.py
show more ...
|
| #
bc530af5
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| 20-Mar-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/matmatops_mpiaij4np1'
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| #
3e98d00b
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| 17-Mar-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/balay/fix-redundant-decls-warnings-master'
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| #
52f7967e
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| 17-Mar-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
update scalable routines
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| #
ec07b8f8
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| 16-Mar-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
add support for matmatops_mpiaij for np=1
Requested-by: Ce Qin <qince168@gmail.com>
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| #
f172c304
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| 15-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-plex-pragmatic-parallel
* knepley/feature-plex-tests-new:
Plex ex12: Added logging stages
Plex ex1: Added logging stages
TS e
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-plex-pragmatic-parallel
* knepley/feature-plex-tests-new:
Plex ex12: Added logging stages
Plex ex1: Added logging stages
TS ex18: Indicate broken tests
TS ex11: Indicate broken test
SNES ex62: Added SIMPLE tests
SNES ex12: Removed old tests
Plex: Fixing test descriptions
update to latest hypre tag on github
fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19
MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS.
replace use/mention of depreciated -log_summary in many places
add extchem.py which was written years ago but never put in the distribution (hence it is broken).
refix 96a2602 as it gives parsing erros with gmakegentest.py from scott/test-harness-altfiles
petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes
PetscCMPLX: assume type punning is safe
show more ...
|
| #
a166d259
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| 15-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-torus
* knepley/fix-plex-example-logging: (151 commits)
Plex ex12: Added logging stages
Plex ex1: Added logging stages
Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-torus
* knepley/fix-plex-example-logging: (151 commits)
Plex ex12: Added logging stages
Plex ex1: Added logging stages
update to latest hypre tag on github
fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19
MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS.
replace use/mention of depreciated -log_summary in many places
add extchem.py which was written years ago but never put in the distribution (hence it is broken).
petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes
Minor fixes for tchem examples due to changes in PETSc infrastructure
update webpage about API changes
add help menu for MatCreateSubMatricesMPI()
PetscCMPLX: assume type punning is safe
rename struct Mat_SubMat -> Mat_SubSppt
add a little information to the manual about using tchem
rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual
need to protect the \ passed on the makefile on my Mac
Bib: Updated ref
update src/mat/examples/tests/output/ex23_#.out
rename MatGetSubMat -> MatCreateSubMat
Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES
...
Conflicts:
src/dm/impls/plex/examples/tests/ex1.c
src/dm/impls/plex/examples/tests/ex12.c
show more ...
|
| #
851d29aa
|
| 15-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-tests-new
* knepley/fix-plex-example-logging: (151 commits)
Plex ex12: Added logging stages
Plex ex1: Added logging stag
Merge branch 'knepley/fix-plex-example-logging' into knepley/feature-plex-tests-new
* knepley/fix-plex-example-logging: (151 commits)
Plex ex12: Added logging stages
Plex ex1: Added logging stages
update to latest hypre tag on github
fix 'inf' vs 'Inf' diff wrt vec_vec_utils_tagger_tutorials-ex1_8,9,18,19
MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS.
replace use/mention of depreciated -log_summary in many places
add extchem.py which was written years ago but never put in the distribution (hence it is broken).
petsc4py: update to snapshot with MatGetSubMatrices -> MatCreateSubMatrices etc API changes
Minor fixes for tchem examples due to changes in PETSc infrastructure
update webpage about API changes
add help menu for MatCreateSubMatricesMPI()
PetscCMPLX: assume type punning is safe
rename struct Mat_SubMat -> Mat_SubSppt
add a little information to the manual about using tchem
rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual
need to protect the \ passed on the makefile on my Mac
Bib: Updated ref
update src/mat/examples/tests/output/ex23_#.out
rename MatGetSubMat -> MatCreateSubMat
Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES
...
Conflicts:
src/dm/impls/plex/examples/tests/ex12.c
show more ...
|
| #
c90b701e
|
| 14-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits)
Minor fixes for tchem examples due to changes in PETSc infrastructure
update webpage about API changes
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits)
Minor fixes for tchem examples due to changes in PETSc infrastructure
update webpage about API changes
add help menu for MatCreateSubMatricesMPI()
rename struct Mat_SubMat -> Mat_SubSppt
add a little information to the manual about using tchem
rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual
need to protect the \ passed on the makefile on my Mac
Bib: Updated ref
update src/mat/examples/tests/output/ex23_#.out
rename MatGetSubMat -> MatCreateSubMat
Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES
superlu: libray is installed in PREFIX/lib64 - fix this to use PREFIX/lib
backport fixes cc105cc3 2b35c90a - required for 3bf428d - that was backported from master - 80c96bb
'echo -n' fails on opensolaris/osx - so avoid using it.
fix diffs in nightlybuilds due to options in ~/.petscrc
add Kelley03 to src/docs/tex/petsc.bib
build: determine moudles, mpi.h used during buildtime and print in 'info'
fix analyzer warnings
fix build failure on opensolaris - where -lm from flibs is removed due to -lm in cxxlibs. But then - only flib gets used for some configure tests [blaslapack, parms]
config: prefer __restrict over C99 restrict keyword
...
show more ...
|
| #
72f1dcff
|
| 13-Mar-2017 |
Satish Balay <balay@mcs.anl.gov> |
fix duplicate definitions warned by -Wredundant-decls
Also a bugfix? BLASdotu_ -> dotu
Reported-by: Till Martens <till.martens@dlr.de>
|
| #
dcd36c23
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| 11-Mar-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. T
MatSetOption(mat,MAT_IGNORE_ZERO_ENTRIES,PETSC_TRUE) no longer applies to zero values set or added to the matrix diagonal, they are now not ignored and are included in the matrix nonzero structure. This is useful for Jacobians passed to TS.
show more ...
|